>Contig-U09392-1 (Contig-U09392-1Q) /CSM_Contig/Contig-U09392-1Q.Seq.d
GGTAAAAAATTAATAATTGGTAAATCATTAAAAGAAATTGAAACTTTAAC
ACCTCAATTAATTGTTGCATCAAATAATTGTTTAAATGATAATAATAATG
ATCAAAAGAAGAGAGAATTATTAGAGAATTTACAAACTAAAATTGAATCA
CCAATTTATGAAATTTTAAATCAATTAGATTCAATTGATCCTATATTCCA
ATTTAAAAATGCAATTAAACAATATCAAGCAACTTTAATTAAATTAAATG
ATTCAATTGATGTTTCAACAGTGACCAATGATAATTCAAAACAAATTGAT
GAATATATTTCAAAACTATCAAATTTACAATCAAATCATTTAATACCATT
ATTGAAACAACAAGGTTTAAATGAAAAAGAATTAAAAGAATTTGAATCAC
AATTGAAATCTAAATTATCTGATGTTAACTCAATTTCAAAAGATTATTTA
AAGAATTTGAAACAGTCTAAATTGACAGACACAATTAAAGCTGAGAAGGA
TATGTCAATCTCTTCACTTTGTAATTTAATAAATTCAATTCAAAGTATTA
ATCAACCAAAGATTGAAGATAATCGTATCAAACTATCACAATCCTCTCAA
TCAAAATCAAAAGATATTAAACAATTGGTTGATTCAATTAAGTCAAATAA
TCTATTGCCAATTGTTGAATCACCAAATAAAATTGAACGTTATGTTTCAA
TTCAAACAAATTCAACTAAACCAATATTTTCATCATCATCATCAAATAAT
GGTAAAATCATTTCAACAGCTCAAGTAAATTATAAACCAAGATCATCTTC
ACAACCTCAAAAACCAATTTTAACAAATACAAATAATATTACAATTACAA
AACCAATTAGACCAATTGAAACTAGAGTACCAATTAAATTAACAACTCAA
CCTCAATCTACAAATCCTAAAACTGTACCACCAACAACAACTACTACTAC
AGAAGCAACTACAACAGCAACAAAACCAATACCAAATAAAACACCACAAC
CAATTAATACTTTTAAACCAAGTGATAAAGGTGCATCATTAGAAGATTCA
TGTATTAATGCAGCAAATCAAATGTCAAATATATCAGGTAATGAACAACT
TGGTACAATTGGTAAAGAATTGGAAGCTTATGCAAATGCAATTAAAATTG
GTGATAAAAAACAAATTTTATTATGTGGTAGAAATATATCTATACTTTTA
AATAAATATTCAACAGAGGTTTCAAATAATATTAAATCAACTCCAACTTC
AAATAAAATGTTACAAACAAGATGTAGTCATGGTATTGGTGTTTTACAAA
CACTAAGTTGTCAATTTAAAATTTTATCAAGTGTTAAAGCTGCTTCTGAT
GAAAAAGATTCTGACTCTGATTCACAATTAACTTCAATGGTTAATCAATT
AACTTCAACTTTATTAGATTTAAATACAAGTACAAGTACTTTAAACAAAT
TTAAAAAGTAAAAAAATAAAAAAAAATAAATAAATAAAAAAAATAAAAAT
AATAAATAATAAAAATAATTTTAAAATAATAAATAATAAAAATAATTTTT
CTAAA----------TAAAAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAA

est1=AFF833F,1,638
est2=VFN311F,160,776
est3=SLJ323F,193,350
est4=SSG458F,677,1251
est5=VFN311Z,795,1483
est6=SSC716F,864,1460
est7=AFF833Z,1015,1448
est8=SLJ323Z,1293,1556
est9=SSG458Z,1557,1688

vkn**lvnh*kklkl*hln*llhqiiv*miiimikrreny*riyklklnhqfmkf*in*i
qlilysnlkmqlnnikql*ln*miqlmfqq*pmiiqnklmnifqnyqiynqii*yhy*nn
kv*mkkn*knlnhn*nlnylmltqfqkii*ri*nsln*qtqlklrricqslhfvi**iqf
kvlinqrlkiivsnyhnplnqnqkilnnwliqlsqiiycqllnhqiklnvmfqfkqiqln
qyfhhhhqimvksfqqlk*iinqdhlhnlknqf*qiqiilqlqnqldqlkleyqln*qln
lnlqilklyhqqqlllqkqlqqqqnqyqikhhnqlillnqvikvhh*kihvlmqqikcqi
yqvmnnlvqlvknwklmqmqlklviknkfyyvveiylyf*iniqqrfqiilnqlqlqikc
ykqdvvmvlvfykh*vvnlkfyqvlklllmkkiltlihn*lqwlin*lqly*i*iqvqvl
*tnlkskkikknk*IKKIKIINNKNNFKIINNKNNFSK---

---KKVKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKQKKKKKK

Frame A:
gkkliigkslkeietltpqlivasnnclndnnndqkkrellenlqtkiespiyeilnqld
sidpifqfknaikqyqatliklndsidvstvtndnskqideyisklsnlqsnhlipllkq
qglnekelkefesqlksklsdvnsiskdylknlkqskltdtikaekdmsisslcnlinsi
qsinqpkiednriklsqssqskskdikqlvdsiksnnllpivespnkieryvsiqtnstk
pifsssssnngkiistaqvnykprsssqpqkpiltntnnititkpirpietrvpiklttq
pqstnpktvpptttttteatttatkpipnktpqpintfkpsdkgasledscinaanqmsn
isgneqlgtigkeleayanaikigdkkqillcgrnisillnkystevsnnikstptsnkm
lqtrcshgigvlqtlscqfkilssvkaasdekdsdsdsqltsmvnqltstlldlntstst
lnkfkk*knkkk*inkknknnk**k*f*nnk**k*ff*---

---*kskkkkkkkkkkkkkkkkkkkkkqkkkkkkkkkkktkkkkkk

Frame B:
vkn**lvnh*kklkl*hln*llhqiiv*miiimikrreny*riyklklnhqfmkf*in*i
qlilysnlkmqlnnikql*ln*miqlmfqq*pmiiqnklmnifqnyqiynqii*yhy*nn
kv*mkkn*knlnhn*nlnylmltqfqkii*ri*nsln*qtqlklrricqslhfvi**iqf
kvlinqrlkiivsnyhnplnqnqkilnnwliqlsqiiycqllnhqiklnvmfqfkqiqln
qyfhhhhqimvksfqqlk*iinqdhlhnlknqf*qiqiilqlqnqldqlkleyqln*qln
lnlqilklyhqqqlllqkqlqqqqnqyqikhhnqlillnqvikvhh*kihvlmqqikcqi
yqvmnnlvqlvknwklmqmqlklviknkfyyvveiylyf*iniqqrfqiilnqlqlqikc
ykqdvvmvlvfykh*vvnlkfyqvlklllmkkiltlihn*lqwlin*lqly*i*iqvqvl
*tnlkskkikknk*IKKIKIINNKNNFKIINNKNNFSK---

---KKVKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKQKKKKKK

Frame C:
*kinnw*iikrn*nfntsinccik*lfk*****skeeriireftn*n*itnl*nfksirf
n*syipi*kcn*tissnfn*ik*fn*cfnsdq**fktn**iyfktikftiksfntiiett
rfk*krikri*itiei*ii*c*lnfkrlfkefetv*idrhn*s*egyvnlftl*fnkfns
ky*stkd*r*syqtitilsikikry*tig*fn*vk*sianc*itk*n*tlcfnsnkfn*t
nifiiiik*w*nhfnssskl*tkiifttsktnfnkyk*yynyktn*tn*n*stn*innst
siyks*ncttnnnyyyrsnynsnktntk*ntttn*yf*tk**rciirrfmy*csksnvky
ir**ttwynw*rigslckcn*nw**ktnfimw*kyiytfk*ifnrgfk*y*insnfk*nv
tnkm*swywcftntklsi*nfikc*scf**krf*l*ftinfng*sinfnfirfkykykyf
kqi*kvkk*kkink*kk*k**iikiilk**iikiifl---

---kk*kkkkkkkkkkkkkkkkkkkktkkkkkkkkkkknkkkkkkk

Query= Contig-U09392-1 (Contig-U09392-1Q)
/CSM_Contig/Contig-U09392-1Q.Seq.d
         (1696 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U09392-1 (Contig-U09392-1Q) /CSM_Contig/Conti...  2876  0.0
Contig-U12144-1 (Contig-U12144-1Q) /CSM_Contig/Conti...    52  2e-06
Contig-U12197-1 (Contig-U12197-1Q) /CSM_Contig/Conti...    44  5e-04
Contig-U11680-1 (Contig-U11680-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U11357-1 (Contig-U11357-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U11216-1 (Contig-U11216-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U10985-1 (Contig-U10985-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U09935-1 (Contig-U09935-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U09625-1 (Contig-U09625-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U03923-1 (Contig-U03923-1Q) /CSM_Contig/Conti...    42  0.002

>Contig-U09392-1 (Contig-U09392-1Q) /CSM_Contig/Contig-U09392-1Q.Seq.d
          Length = 1696

 Score = 2876 bits (1451), Expect = 0.0
 Identities = 1451/1451 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggtaaaaaattaataattggtaaatcattaaaagaaattgaaactttaacacctcaatta 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ggtaaaaaattaataattggtaaatcattaaaagaaattgaaactttaacacctcaatta 60

                                                                        
Query: 61   attgttgcatcaaataattgtttaaatgataataataatgatcaaaagaagagagaatta 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   attgttgcatcaaataattgtttaaatgataataataatgatcaaaagaagagagaatta 120

                                                                        
Query: 121  ttagagaatttacaaactaaaattgaatcaccaatttatgaaattttaaatcaattagat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ttagagaatttacaaactaaaattgaatcaccaatttatgaaattttaaatcaattagat 180

                                                                        
Query: 181  tcaattgatcctatattccaatttaaaaatgcaattaaacaatatcaagcaactttaatt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tcaattgatcctatattccaatttaaaaatgcaattaaacaatatcaagcaactttaatt 240

                                                                        
Query: 241  aaattaaatgattcaattgatgtttcaacagtgaccaatgataattcaaaacaaattgat 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  aaattaaatgattcaattgatgtttcaacagtgaccaatgataattcaaaacaaattgat 300

                                                                        
Query: 301  gaatatatttcaaaactatcaaatttacaatcaaatcatttaataccattattgaaacaa 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  gaatatatttcaaaactatcaaatttacaatcaaatcatttaataccattattgaaacaa 360

                                                                        
Query: 361  caaggtttaaatgaaaaagaattaaaagaatttgaatcacaattgaaatctaaattatct 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  caaggtttaaatgaaaaagaattaaaagaatttgaatcacaattgaaatctaaattatct 420

                                                                        
Query: 421  gatgttaactcaatttcaaaagattatttaaagaatttgaaacagtctaaattgacagac 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  gatgttaactcaatttcaaaagattatttaaagaatttgaaacagtctaaattgacagac 480

                                                                        
Query: 481  acaattaaagctgagaaggatatgtcaatctcttcactttgtaatttaataaattcaatt 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  acaattaaagctgagaaggatatgtcaatctcttcactttgtaatttaataaattcaatt 540

                                                                        
Query: 541  caaagtattaatcaaccaaagattgaagataatcgtatcaaactatcacaatcctctcaa 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  caaagtattaatcaaccaaagattgaagataatcgtatcaaactatcacaatcctctcaa 600

                                                                        
Query: 601  tcaaaatcaaaagatattaaacaattggttgattcaattaagtcaaataatctattgcca 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  tcaaaatcaaaagatattaaacaattggttgattcaattaagtcaaataatctattgcca 660

                                                                        
Query: 661  attgttgaatcaccaaataaaattgaacgttatgtttcaattcaaacaaattcaactaaa 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661  attgttgaatcaccaaataaaattgaacgttatgtttcaattcaaacaaattcaactaaa 720

                                                                        
Query: 721  ccaatattttcatcatcatcatcaaataatggtaaaatcatttcaacagctcaagtaaat 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721  ccaatattttcatcatcatcatcaaataatggtaaaatcatttcaacagctcaagtaaat 780

                                                                        
Query: 781  tataaaccaagatcatcttcacaacctcaaaaaccaattttaacaaatacaaataatatt 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781  tataaaccaagatcatcttcacaacctcaaaaaccaattttaacaaatacaaataatatt 840

                                                                        
Query: 841  acaattacaaaaccaattagaccaattgaaactagagtaccaattaaattaacaactcaa 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841  acaattacaaaaccaattagaccaattgaaactagagtaccaattaaattaacaactcaa 900

                                                                        
Query: 901  cctcaatctacaaatcctaaaactgtaccaccaacaacaactactactacagaagcaact 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901  cctcaatctacaaatcctaaaactgtaccaccaacaacaactactactacagaagcaact 960

                                                                        
Query: 961  acaacagcaacaaaaccaataccaaataaaacaccacaaccaattaatacttttaaacca 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961  acaacagcaacaaaaccaataccaaataaaacaccacaaccaattaatacttttaaacca 1020

                                                                        
Query: 1021 agtgataaaggtgcatcattagaagattcatgtattaatgcagcaaatcaaatgtcaaat 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 agtgataaaggtgcatcattagaagattcatgtattaatgcagcaaatcaaatgtcaaat 1080

                                                                        
Query: 1081 atatcaggtaatgaacaacttggtacaattggtaaagaattggaagcttatgcaaatgca 1140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 atatcaggtaatgaacaacttggtacaattggtaaagaattggaagcttatgcaaatgca 1140

                                                                        
Query: 1141 attaaaattggtgataaaaaacaaattttattatgtggtagaaatatatctatactttta 1200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 attaaaattggtgataaaaaacaaattttattatgtggtagaaatatatctatactttta 1200

                                                                        
Query: 1201 aataaatattcaacagaggtttcaaataatattaaatcaactccaacttcaaataaaatg 1260
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 aataaatattcaacagaggtttcaaataatattaaatcaactccaacttcaaataaaatg 1260

                                                                        
Query: 1261 ttacaaacaagatgtagtcatggtattggtgttttacaaacactaagttgtcaatttaaa 1320
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ttacaaacaagatgtagtcatggtattggtgttttacaaacactaagttgtcaatttaaa 1320

                                                                        
Query: 1321 attttatcaagtgttaaagctgcttctgatgaaaaagattctgactctgattcacaatta 1380
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 attttatcaagtgttaaagctgcttctgatgaaaaagattctgactctgattcacaatta 1380

                                                                        
Query: 1381 acttcaatggttaatcaattaacttcaactttattagatttaaatacaagtacaagtact 1440
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1381 acttcaatggttaatcaattaacttcaactttattagatttaaatacaagtacaagtact 1440

                       
Query: 1441 ttaaacaaatt 1451
            |||||||||||
Sbjct: 1441 ttaaacaaatt 1451


>Contig-U12144-1 (Contig-U12144-1Q) /CSM_Contig/Contig-U12144-1Q.Seq.d
          Length = 645

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 922 actgtaccaccaacaacaactactactaca 951
           ||||||| ||||||||||||||||||||||
Sbjct: 409 actgtacaaccaacaacaactactactaca 438


>Contig-U12197-1 (Contig-U12197-1Q) /CSM_Contig/Contig-U12197-1Q.Seq.d
          Length = 1896

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 932 caacaacaactactactacagaagcaactacaacagcaacaa 973
           ||||||||||||| ||||||  | ||||||||||| ||||||
Sbjct: 236 caacaacaactacaactacaacaacaactacaacaacaacaa 277


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 56,935
Number of Sequences: 6905
Number of extensions: 56935
Number of successful extensions: 8761
Number of sequences better than 10.0: 1228
length of query: 1696
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1680
effective length of database: 5,564,391
effective search space: 9348176880
effective search space used: 9348176880
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U09392-1 (Contig-U09392-1Q) /CSM_Contig/Contig-U09392-1Q.Seq.d
         (1696 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AF356600) Dictyostelium discoideum filament-interacting pro...  1832   0.0    1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...  1832   0.0    1
(BJ323788) Dictyostelium discoideum cDNA clone:dda12b10, 5' ...  1265   0.0    1
(BJ416713) Dictyostelium discoideum cDNA clone:ddv27f03, 5' ...  1223   0.0    1
(BJ435414) Dictyostelium discoideum cDNA clone:ddv27f03, 3' ...   908   0.0    2
(BJ340238) Dictyostelium discoideum cDNA clone:dda12b10, 3' ...   733   0.0    3
(AU073236) Dictyostelium discoideum slug cDNA, clone SSG458.      476   e-129  1
(AU071903) Dictyostelium discoideum slug cDNA, clone SSC716.      218   3e-81  2
(AU053649) Dictyostelium discoideum slug cDNA, clone SLJ323.      315   3e-81  1
(AU060343) Dictyostelium discoideum slug cDNA, clone SLJ323.      307   7e-79  1
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643...    38   7e-10  19
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    38   6e-09  14
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...    40   7e-09  18
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214...    42   6e-08  15
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome.         36   7e-08  22
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    42   8e-08  15
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    36   2e-07  18
(AC116960) Dictyostelium discoideum chromosome 2 map complem...    38   8e-07  17
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    38   1e-06  16
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124...    36   2e-06  15
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...    38   3e-06  16
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    40   6e-06  15
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423...    36   7e-06  18
(AC116551) Dictyostelium discoideum chromosome 2 map complem...    32   7e-06  17
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ...    40   9e-06  18
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl...    34   2e-05  20
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    42   3e-05  21
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-...    38   4e-05  13
(CP000046) Staphylococcus aureus subsp. aureus COL, complete...    36   6e-05  22
(CP000255) Staphylococcus aureus subsp. aureus USA300_FPR375...    36   8e-05  22
(AP009351) Staphylococcus aureus subsp. aureus str. Newman D...    36   9e-05  22
(AE017263) Mesoplasma florum L1 complete genome.                   38   1e-04  21
(BX571857) Staphylococcus aureus strain MSSA476, complete ge...    36   1e-04  22
(CP000253) Staphylococcus aureus subsp. aureus NCTC 8325, co...    36   2e-04  23
(BA000033) Staphylococcus aureus subsp. aureus MW2 DNA, comp...    36   2e-04  22
(CP001078) Clostridium botulinum E3 str. Alaska E43, complet...    38   3e-04  18
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen...    36   3e-04  18
(CP000730) Staphylococcus aureus subsp. aureus USA300_TCH151...    36   6e-04  22
(CU469464) Candidatus Phytoplasma mali strain AT complete ch...    38   0.001  19
(BA000017) Staphylococcus aureus subsp. aureus Mu50 DNA, com...    36   0.001  23
(AP009324) Staphylococcus aureus subsp. aureus Mu3 DNA, comp...    36   0.001  23
(BA000018) Staphylococcus aureus subsp. aureus N315 DNA, com...    36   0.003  22
(AM180355) Clostridium difficile 630 complete genome.              36   0.003  19
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-...    36   0.003  12
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041...    34   0.004  12
(CP000736) Staphylococcus aureus subsp. aureus JH1, complete...    36   0.004  22
(CP000703) Staphylococcus aureus subsp. aureus JH9, complete...    36   0.004  22
(BX927240) Zebrafish DNA sequence from clone DKEY-16N13 in l...    38   0.004  12
(EK179326) 1095458112895 Global-Ocean-Sampling_GS-31-01-01-1...    56   0.005  1
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595...    42   0.005  16
(CP000111) Prochlorococcus marinus str. MIT 9312, complete g...    36   0.005  24
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568...    36   0.005  13
(AC184499) Strongylocentrotus purpuratus clone R3-16G4, WORK...    50   0.006  7
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572...    38   0.007  13
(AP006716) Staphylococcus haemolyticus JCSC1435 DNA, complet...    48   0.008  19
(BA000016) Clostridium perfringens str. 13 DNA, complete gen...    36   0.008  22
(AL844507) Plasmodium falciparum chromosome 8.                     40   0.008  12
(BX248583) Blochmannia floridanus complete genome.                 38   0.009  20
(AE014841) Plasmodium falciparum 3D7 chromosome 11 section 6...    42   0.010  13
(BX571856) Staphylococcus aureus subsp. aureus strain MRSA25...    34   0.011  23
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s...    40   0.011  14
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117...    34   0.011  13
(AE014828) Plasmodium falciparum 3D7 chromosome 14 section 1...    34   0.013  17
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)...    46   0.017  21
(CP000609) Methanococcus maripaludis C5, complete genome.          42   0.017  18
(AC005504) Plasmodium falciparum chromosome 12, *** SEQUENCI...    38   0.017  8
(AM285302) Spiroplasma citri GII3-3X chromosome, contig Cont...    38   0.018  12
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ...    34   0.018  11
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098...    38   0.018  14
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp...    32   0.019  20
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi...    38   0.020  23
(AE016877) Bacillus cereus ATCC 14579, complete genome.            36   0.021  23
(AE017245) Mycoplasma synoviae 53, complete genome.                34   0.022  22
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701...    38   0.023  13
(AC005140) Plasmodium falciparum chromosome 12 clone 3D7, **...    36   0.025  16
(CP000361) Arcobacter butzleri RM4018, complete genome.            36   0.025  19
(CU694808) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    34   0.025  9
(AE014820) Plasmodium falciparum 3D7 chromosome 14 section 5...    36   0.026  13
(CP000382) Clostridium novyi NT, complete genome.                  36   0.029  22
(AX344564) Sequence 15 from Patent WO0200932.                      34   0.029  17
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771...    34   0.032  10
(CP000678) Methanobrevibacter smithii ATCC 35061, complete g...    46   0.036  22
(AC146993) Lytechinus variegatus clone BLV-223C1, WORKING DR...    40   0.041  7
(AC222038) Bos taurus clone CH240-374H5, WORKING DRAFT SEQUE...    36   0.043  2
(AC230105) Bos taurus clone CH240-521E19, WORKING DRAFT SEQU...    36   0.043  2
(AC152267) Bos taurus clone CH240-5C1, WORKING DRAFT SEQUENC...    36   0.044  2
(AC151057) Bos taurus clone CH240-521E19, WORKING DRAFT SEQU...    36   0.044  2
(CU469553) Medicago truncatula chromosome 5 clone mth2-57m18...    42   0.045  8
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720...    38   0.048  11
(CP001056) Clostridium botulinum B str. Eklund 17B, complete...    46   0.050  18
(AX344574) Sequence 25 from Patent WO0200932.                      32   0.050  19
(CP000246) Clostridium perfringens ATCC 13124, complete genome.    36   0.052  22
(AC215446) Solanum lycopersicum chromosome 2 clone C02SLe001...    34   0.059  10
(CP000770) Candidatus Sulcia muelleri GWSS, complete genome.       32   0.060  14
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255...    40   0.060  21
(AC215625) Populus trichocarpa clone POP011-A24, complete se...    32   0.063  15
(FH554943) CHO_OF4790xg05r1.ab1 CHO_OF4 Nicotiana tabacum ge...    52   0.071  1
(EK134897) 1093011969302 Global-Ocean-Sampling_GS-31-01-01-1...    52   0.071  1
(EK132809) 1093010568538 Global-Ocean-Sampling_GS-31-01-01-1...    52   0.071  1
(FG179262) AGN_PNL201af1_e9.trimmed.seq AGN_PNL Nicotiana ta...    52   0.071  1

>(AF356600) Dictyostelium discoideum filament-interacting protein
            (fip) mRNA, complete cds.
          Length = 6234

 Score = 1832 bits (924), Expect = 0.0
 Identities = 924/924 (100%)
 Strand = Plus / Plus


Query: 2    gtaaaaaattaataattggtaaatcattaaaagaaattgaaactttaacacctcaattaa 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4681 gtaaaaaattaataattggtaaatcattaaaagaaattgaaactttaacacctcaattaa 4740


Query: 62   ttgttgcatcaaataattgtttaaatgataataataatgatcaaaagaagagagaattat 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4741 ttgttgcatcaaataattgtttaaatgataataataatgatcaaaagaagagagaattat 4800


Query: 122  tagagaatttacaaactaaaattgaatcaccaatttatgaaattttaaatcaattagatt 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4801 tagagaatttacaaactaaaattgaatcaccaatttatgaaattttaaatcaattagatt 4860


Query: 182  caattgatcctatattccaatttaaaaatgcaattaaacaatatcaagcaactttaatta 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4861 caattgatcctatattccaatttaaaaatgcaattaaacaatatcaagcaactttaatta 4920


Query: 242  aattaaatgattcaattgatgtttcaacagtgaccaatgataattcaaaacaaattgatg 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4921 aattaaatgattcaattgatgtttcaacagtgaccaatgataattcaaaacaaattgatg 4980


Query: 302  aatatatttcaaaactatcaaatttacaatcaaatcatttaataccattattgaaacaac 361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4981 aatatatttcaaaactatcaaatttacaatcaaatcatttaataccattattgaaacaac 5040


Query: 362  aaggtttaaatgaaaaagaattaaaagaatttgaatcacaattgaaatctaaattatctg 421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5041 aaggtttaaatgaaaaagaattaaaagaatttgaatcacaattgaaatctaaattatctg 5100


Query: 422  atgttaactcaatttcaaaagattatttaaagaatttgaaacagtctaaattgacagaca 481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5101 atgttaactcaatttcaaaagattatttaaagaatttgaaacagtctaaattgacagaca 5160


Query: 482  caattaaagctgagaaggatatgtcaatctcttcactttgtaatttaataaattcaattc 541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5161 caattaaagctgagaaggatatgtcaatctcttcactttgtaatttaataaattcaattc 5220


Query: 542  aaagtattaatcaaccaaagattgaagataatcgtatcaaactatcacaatcctctcaat 601
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5221 aaagtattaatcaaccaaagattgaagataatcgtatcaaactatcacaatcctctcaat 5280


Query: 602  caaaatcaaaagatattaaacaattggttgattcaattaagtcaaataatctattgccaa 661
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5281 caaaatcaaaagatattaaacaattggttgattcaattaagtcaaataatctattgccaa 5340


Query: 662  ttgttgaatcaccaaataaaattgaacgttatgtttcaattcaaacaaattcaactaaac 721
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5341 ttgttgaatcaccaaataaaattgaacgttatgtttcaattcaaacaaattcaactaaac 5400


Query: 722  caatattttcatcatcatcatcaaataatggtaaaatcatttcaacagctcaagtaaatt 781
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5401 caatattttcatcatcatcatcaaataatggtaaaatcatttcaacagctcaagtaaatt 5460


Query: 782  ataaaccaagatcatcttcacaacctcaaaaaccaattttaacaaatacaaataatatta 841
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5461 ataaaccaagatcatcttcacaacctcaaaaaccaattttaacaaatacaaataatatta 5520


Query: 842  caattacaaaaccaattagaccaattgaaactagagtaccaattaaattaacaactcaac 901
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5521 caattacaaaaccaattagaccaattgaaactagagtaccaattaaattaacaactcaac 5580


Query: 902  ctcaatctacaaatcctaaaactg 925
            ||||||||||||||||||||||||
Sbjct: 5581 ctcaatctacaaatcctaaaactg 5604

 Score =  908 bits (458), Expect = 0.0
 Identities = 458/458 (100%)
 Strand = Plus / Plus


Query: 994  ccacaaccaattaatacttttaaaccaagtgataaaggtgcatcattagaagattcatgt 1053
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5673 ccacaaccaattaatacttttaaaccaagtgataaaggtgcatcattagaagattcatgt 5732


Query: 1054 attaatgcagcaaatcaaatgtcaaatatatcaggtaatgaacaacttggtacaattggt 1113
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5733 attaatgcagcaaatcaaatgtcaaatatatcaggtaatgaacaacttggtacaattggt 5792


Query: 1114 aaagaattggaagcttatgcaaatgcaattaaaattggtgataaaaaacaaattttatta 1173
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5793 aaagaattggaagcttatgcaaatgcaattaaaattggtgataaaaaacaaattttatta 5852


Query: 1174 tgtggtagaaatatatctatacttttaaataaatattcaacagaggtttcaaataatatt 1233
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5853 tgtggtagaaatatatctatacttttaaataaatattcaacagaggtttcaaataatatt 5912


Query: 1234 aaatcaactccaacttcaaataaaatgttacaaacaagatgtagtcatggtattggtgtt 1293
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5913 aaatcaactccaacttcaaataaaatgttacaaacaagatgtagtcatggtattggtgtt 5972


Query: 1294 ttacaaacactaagttgtcaatttaaaattttatcaagtgttaaagctgcttctgatgaa 1353
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5973 ttacaaacactaagttgtcaatttaaaattttatcaagtgttaaagctgcttctgatgaa 6032


Query: 1354 aaagattctgactctgattcacaattaacttcaatggttaatcaattaacttcaacttta 1413
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6033 aaagattctgactctgattcacaattaacttcaatggttaatcaattaacttcaacttta 6092


Query: 1414 ttagatttaaatacaagtacaagtactttaaacaaatt 1451
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 6093 ttagatttaaatacaagtacaagtactttaaacaaatt 6130

 Score = 30.2 bits (15), Expect(8) = 0.006
 Identities = 15/15 (100%)
 Strand = Plus / Plus


Query: 85  aatgataataataat 99
           |||||||||||||||
Sbjct: 873 aatgataataataat 887

 Score = 28.2 bits (14), Expect(8) = 0.006
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 381  attaaaagaatttg 394
            ||||||||||||||
Sbjct: 1940 attaaaagaatttg 1953

 Score = 28.2 bits (14), Expect(8) = 0.006
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 838  attacaattacaaa 851
            ||||||||||||||
Sbjct: 3941 attacaattacaaa 3954

 Score = 28.2 bits (14), Expect(8) = 0.006
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 996  acaaccaattaata 1009
            ||||||||||||||
Sbjct: 4553 acaaccaattaata 4566

 Score = 26.3 bits (13), Expect(8) = 0.006
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 207  aaatgcaattaaa 219
            |||||||||||||
Sbjct: 1361 aaatgcaattaaa 1373

 Score = 26.3 bits (13), Expect(8) = 0.006
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 528  aataaattcaatt 540
            |||||||||||||
Sbjct: 3443 aataaattcaatt 3455

 Score = 26.3 bits (13), Expect(8) = 0.006
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 1134 aaatgcaattaaa 1146
            |||||||||||||
Sbjct: 4886 aaatgcaattaaa 4898

 Score = 26.3 bits (13), Expect(8) = 0.006
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 1375 caattaacttcaa 1387
            |||||||||||||
Sbjct: 6075 caattaacttcaa 6087

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 2,107,580,524
Number of extensions: 146396714
Number of successful extensions: 14449314
Number of sequences better than 10.0: 676
Length of query: 1696
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1672
Effective length of database: 97,308,875,965
Effective search space: 162700440613480
Effective search space used: 162700440613480
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U09392-1 (Contig-U09392-1Q) /CSM_Contig/Contig-U09392-1Q.Seq.d
         (1696 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116984_116(AC116984|pid:none) Dictyostelium discoideum chromos...   624   e-177
CP001083_1281(CP001083|pid:none) Clostridium botulinum Ba4 str. ...    42   0.068
CP001216_114(CP001216|pid:none) Bacillus anthracis str. CDC 684 ...    42   0.068
CP001406_107(CP001406|pid:none) Bacillus cereus 03BB102 plasmid ...    42   0.068
BX293980_740(BX293980|pid:none) Mycoplasma mycoides subsp. mycoi...    40   0.20
CP001393_233(CP001393|pid:none) Anaerocellum thermophilum DSM 67...    40   0.20
FN357294_12(FN357294|pid:none) Schistosoma mansoni genome sequen...    40   0.20
CR940347_447(CR940347|pid:none) Theileria annulata strain Ankara...    39   0.44
CR382138_241(CR382138|pid:none) Debaryomyces hansenii strain CBS...    39   0.57
AM910991_203(AM910991|pid:none) Plasmodium knowlesi strain H chr...    39   0.75
CP001056_2119(CP001056|pid:none) Clostridium botulinum B str. Ek...    39   0.75
FJ406984_1(FJ406984|pid:none) Plasmodium reichenowi isolate CDC-...    39   0.75
CR940348_807(CR940348|pid:none) Theileria annulata strain Ankara...    39   0.75
(Q54G05) RecName: Full=Putative leucine-rich repeat-containing p...    38   0.98
CP000087_318(CP000087|pid:none) Rickettsia bellii RML369-C, comp...    38   0.98
CP000123_803(CP000123|pid:none) Mycoplasma capricolum subsp. cap...    38   0.98
CP000153_984(CP000153|pid:none) Sulfurimonas denitrificans DSM 1...    38   0.98
CR382137_894(CR382137|pid:none) Debaryomyces hansenii strain CBS...    38   0.98
FM992691_510(FM992691|pid:none) Candida dubliniensis CD36 chromo...    38   0.98
BA000023_2271(BA000023|pid:none) Sulfolobus tokodaii str. 7 DNA,...    38   1.3
CR382137_525(CR382137|pid:none) Debaryomyces hansenii strain CBS...    38   1.3
CP001401_2418(CP001401|pid:none) Sulfolobus islandicus M.16.27, ...    37   1.7
Z54238_9(Z54238|pid:none) Caenorhabditis elegans Cosmid T28C6, c...    37   1.7
Z54238_7(Z54238|pid:none) Caenorhabditis elegans Cosmid T28C6, c...    37   1.7
AJ783769_37(AJ783769|pid:none) Sulfolobus tengchongensis spindle...    37   1.7
(Q6FWF3) RecName: Full=E3 ubiquitin-protein ligase BRE1;        ...    37   1.7
CP000932_867(CP000932|pid:none) Campylobacter lari RM2100, compl...    37   2.2
(O76329) RecName: Full=Interaptin; AltName: Full=Alpha-actinin B...    37   2.9
CP000853_858(CP000853|pid:none) Alkaliphilus oremlandii OhILAs, ...    37   2.9
FN392322_103(FN392322|pid:none) Pichia pastoris GS115 chromosome...    37   2.9
AF183909_3(AF183909|pid:none) Argopecten irradians MHC gene, alt...    37   2.9
U09782_1(U09782|pid:none) Argopecten irradians myosin heavy chai...    37   2.9
AF303741_314(AF303741|pid:none) Chilo iridescent virus complete ...    37   2.9
FJ406982_1(FJ406982|pid:none) Plasmodium falciparum isolate 7G8 ...    37   2.9
FN392320_729(FN392320|pid:none) Pichia pastoris GS115 chromosome...    37   2.9
AF183909_1(AF183909|pid:none) Argopecten irradians MHC gene, alt...    37   2.9
AF183909_5(AF183909|pid:none) Argopecten irradians MHC gene, alt...    37   2.9
FJ406968_1(FJ406968|pid:none) Plasmodium falciparum isolate W2me...    36   3.7
FJ406967_1(FJ406967|pid:none) Plasmodium falciparum isolate Well...    36   3.7
FM992689_428(FM992689|pid:none) Candida dubliniensis CD36 chromo...    36   3.7
AL035476_69(AL035476|pid:none) Plasmodium falciparum MAL4P3.  &A...    36   3.7
FJ406977_1(FJ406977|pid:none) Plasmodium falciparum isolate FCR3...    36   3.7
CR382139_729(CR382139|pid:none) Debaryomyces hansenii strain CBS...    36   3.7
FJ406979_1(FJ406979|pid:none) Plasmodium falciparum isolate Dd2 ...    36   3.7
FJ406969_1(FJ406969|pid:none) Plasmodium falciparum isolate T9/1...    36   3.7
FJ406971_1(FJ406971|pid:none) Plasmodium falciparum isolate T9/9...    36   3.7
FJ406976_1(FJ406976|pid:none) Plasmodium falciparum isolate HB3 ...    36   3.7
CR932234_1(CR932234|pid:none) Structural maintenance of chromoso...    36   4.9
AK302797_1(AK302797|pid:none) Homo sapiens cDNA FLJ61494 complet...    36   4.9
CR382134_228(CR382134|pid:none) Debaryomyces hansenii strain CBS...    36   4.9
CP001399_63(CP001399|pid:none) Sulfolobus islandicus L.S.2.15, c...    36   4.9
AY536375_1(AY536375|pid:none) Homo sapiens rhabdomyosarcoma anti...    36   4.9
CP000923_515(CP000923|pid:none) Thermoanaerobacter sp. X514, com...    36   4.9
D13629_1(D13629|pid:none) Homo sapiens KIAA0004 mRNA, partial cds.     36   4.9
AL844505_277(AL844505|pid:none) Plasmodium falciparum 3D7 chromo...    36   4.9
BC122918_1(BC122918|pid:none) Xenopus tropicalis oral-facial-dig...    36   4.9
S32763(S32763;I37947) kinectin 1 - human  &Z22551_1(Z22551|pid:n...    36   4.9
I53799(I53799) CG1 protein - human  &L25616_1(L25616|pid:none)         36   4.9
CP001400_63(CP001400|pid:none) Sulfolobus islandicus M.14.25, co...    36   4.9
DQ000238_1(DQ000238|pid:none) Bos taurus insertion sequence L1_B...    35   6.4
AE000783_511(AE000783|pid:none) Borrelia burgdorferi B31, comple...    35   6.4
CR382137_797(CR382137|pid:none) Debaryomyces hansenii strain CBS...    35   6.4
CP000866_750(CP000866|pid:none) Nitrosopumilus maritimus SCM1, c...    35   6.4
AM180355_3172(AM180355|pid:none) Clostridium difficile 630 compl...    35   6.4
DQ100474_1(DQ100474|pid:none) Rattus norvegicus LINE-1 retrotran...    35   8.3
AB190952_1(AB190952|pid:none) Helicobacter pylori cagA gene for ...    35   8.3
AM412317_582(AM412317|pid:none) Clostridium botulinum A str. ATC...    35   8.3
BA000016_1716(BA000016|pid:none) Clostridium perfringens str. 13...    35   8.3
CP000111_1959(CP000111|pid:none) Prochlorococcus marinus str. MI...    35   8.3
CP000576_1904(CP000576|pid:none) Prochlorococcus marinus str. MI...    35   8.3
CP001047_47(CP001047|pid:none) Mycoplasma arthritidis 158L3-1, c...    35   8.3
AE017125_1864(AE017125|pid:none) Helicobacter hepaticus ATCC 514...    35   8.3
CP000395_517(CP000395|pid:none) Borrelia afzelii PKo, complete g...    35   8.3
CP000859_2920(CP000859|pid:none) Desulfococcus oleovorans Hxd3, ...    35   8.3
CP001304_45(CP001304|pid:none) Borrelia garinii PBr plasmid PBr_...    35   8.3
CP000852_604(CP000852|pid:none) Caldivirga maquilingensis IC-167...    35   8.3
CP000123_774(CP000123|pid:none) Mycoplasma capricolum subsp. cap...    35   8.3
AE009951_1736(AE009951|pid:none) Fusobacterium nucleatum subsp. ...    35   8.3
DQ100475_1(DQ100475|pid:none) Rattus norvegicus LINE-1 retrotran...    35   8.3
CP001083_1883(CP001083|pid:none) Clostridium botulinum Ba4 str. ...    35   8.3
AM910989_8(AM910989|pid:none) Plasmodium knowlesi strain H chrom...    35   8.3

>AC116984_116(AC116984|pid:none) Dictyostelium discoideum chromosome 2
            map 2567470-3108875 strain AX4, complete sequence.
          Length = 1896

 Score =  624 bits (1609), Expect = e-177
 Identities = 347/463 (74%), Positives = 347/463 (74%)
 Frame = +1

Query: 4    KKLIIGKSLKEIETLTPQLIVASXXXXXXXXXXQKKRELLENLQTKIESPIYEILNQLDS 183
            KKLIIGKSLKEIETLTPQLIVAS          QKKRELLENLQTKIESPIYEILNQLDS
Sbjct: 1412 KKLIIGKSLKEIETLTPQLIVASNNCLNDNNNDQKKRELLENLQTKIESPIYEILNQLDS 1471

Query: 184  IDPIFQFKNAIKQYQATLIKLNDSIDVSTVTNDNSKQIDEYISKLSNLQSNHLIPLLKQQ 363
            IDPIFQFKNAIKQYQATLIKLNDSIDVSTVTNDNSKQIDEYISKLSNLQSNHLIPLLKQQ
Sbjct: 1472 IDPIFQFKNAIKQYQATLIKLNDSIDVSTVTNDNSKQIDEYISKLSNLQSNHLIPLLKQQ 1531

Query: 364  GLNEKELKEFESQLKSKLSDVNSISKDYLKNLKQSKLTDTIKAEKDMXXXXXXXXXXXXX 543
            GLNEKELKEFESQLKSKLSDVNSISKDYLKNLKQSKLTDTIKAEKDM
Sbjct: 1532 GLNEKELKEFESQLKSKLSDVNSISKDYLKNLKQSKLTDTIKAEKDMSISSLCNLINSIQ 1591

Query: 544  XXXXPKIEDNRIKLXXXXXXXXXDIKQLVDSIKSNNLLPIVESPNKIERYVSIQXXXXXX 723
                PKIEDNRIKL         DIKQLVDSIKSNNLLPIVESPNKIERYVSIQ
Sbjct: 1592 SINQPKIEDNRIKLSQSSQSKSKDIKQLVDSIKSNNLLPIVESPNKIERYVSIQTNSTKP 1651

Query: 724  XXXXXXXXXXXXXXXAQVNYKPRSSSQPQKXXXXXXXXXXXXXXXXXXETRVPIKLTTQP 903
                           AQVNYKPRSSSQPQK                  ETRVPIKLTTQP
Sbjct: 1652 IFSSSSSNNGKIISTAQVNYKPRSSSQPQKPILTNTNNITITKPIRPIETRVPIKLTTQP 1711

Query: 904  QSXXXXXXXXXXXXXXXXXXXXXXXXXNKTPQPINTFKPSDKGASLEDSCINAANQMSNI 1083
            QS                         NKTPQPINTFKPSDKGASLEDSCINAANQMSNI
Sbjct: 1712 QSTNPKTVPPTTTTTTEATTTATKPIPNKTPQPINTFKPSDKGASLEDSCINAANQMSNI 1771

Query: 1084 SGNEQLGTIGKELEAYANAIKIGDKKQILLCGRNISILLNKYSTEVSNNIKSTPTSNKML 1263
            SGNEQLGTIGKELEAYANAIKIGDKKQILLCGRNISILLNKYSTEVSNNIKSTPTSNKML
Sbjct: 1772 SGNEQLGTIGKELEAYANAIKIGDKKQILLCGRNISILLNKYSTEVSNNIKSTPTSNKML 1831

Query: 1264 QTRCSHGIGVLQTLSCQFKILXXXXXXXXXXXXXXXXQLTSMV 1392
            QTRCSHGIGVLQTLSCQFKIL                QLTSMV
Sbjct: 1832 QTRCSHGIGVLQTLSCQFKILSSVKAASDEKDSDSDSQLTSMV 1874

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,378,638,083
Number of extensions: 20385189
Number of successful extensions: 67861
Number of sequences better than 10.0: 81
Number of HSP's gapped: 67681
Number of HSP's successfully gapped: 81
Length of query: 565
Length of database: 1,040,966,779
Length adjustment: 134
Effective length of query: 431
Effective length of database: 611,592,589
Effective search space: 263596405859
Effective search space used: 263596405859
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.57  gvh: -0.16  alm: 0.67  top: 0.53  tms: 0.00  mit: 0.37  mip: 0.00
 nuc: 4.27  erl: 0.00  erm: 0.80  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 72.0 %: nuclear
	 16.0 %: cytoplasmic
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal

>> prediction for Contig-U09392-1 is nuc