Contig-U09362-1
Contig ID Contig-U09362-1
Contig update 2002. 9.13
Contig sequence
>Contig-U09362-1 (Contig-U09362-1Q) /CSM_Contig/Contig-U09362-1Q.Seq.d
GTGAATGTTTAGTATTTTCAAATAAAGATAAGGATGGCCATAGTTCTGGT
ATAACCTGTGTAACCGTTCGAGGTAATAAATTAATTAGTGGAAGTTCCGA
TTCAACTTTGAGGGTTTGGGATATGACAACCGGTCAATGTCTATTAATAT
TACAAGGTCATAATGATGGNGTTAGTTGTTTATGTANGATCGATGATACT
ANATTGGCAANTGGNTCTTTGGATCATTCAATTAATCTTTGGTCAATTGA
AACCGGTCAATTGTTACATTCATTTACAAATAATACTTCAGGTATCTCTT
GTTTG----------TGGTACTATGGGCGGTGCTTTAAATGTTTTCGATA
TNCCATCAGGAATCTTATTGACAACATTTCATGCCCATAGTGATNGAGTC
ACTTCAATTCAATGGTGGGATGGTCCTGAAGGTCCAAGAATTATTAGTTC
CTCTTGGGATTATACTCTAAGAGTTTGGAATTTATACACTTGGTAAAACT
ACAAATCTTTTGGCTGGTCATACTTTTAGAGTTAGATGTACTCAAGTTAG
TGGAAATATTTTAGCAAGTGGCTCTTGGGATACTACCGTAAAAATTTGGG
ATTTACTCACTGGAAGATGTATTCATACCTTATTTGGTCATAGTTTTAAT
GTTTGGTCCATTCAATTCGAAGGTAATCGTTTGGTTTCCGCTGGTTGGGA
TAAAAAAGTTAAAATTTGGGATATGACAACTGGTAAAGAATTATATTCAT
TGGATGGCCATACCGAATCTATCATTTGTATTCAATTTAAAGGTAGTAAA
TTGGTTTCTGCTGCAAAAGAAATTATTGTTTATGATTTTGATTCTTAAAT
TGAGAATCTTTAAAAAATATATTAATAACTTCAA

Gap gap included
Contig length 874
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 2780845
End point 2779970
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 2
Link to clone list U09362
List of clone(s)

est1=SSE239F,1,306
est2=SSE239Z,307,876
Translated Amino Acid sequence
ECLVFSNKDKDGHSSGITCVTVRGNKLISGSSDSTLRVWDMTTGQCLLILQGHNDGVSCL
CXIDDTXLAXGSLDHSINLWSIETGQLLHSFTNNTSGISCL---

---GTMGGALNVFDXPSGILLTTFHAHSDXVTSIQWWDGPEGPRIISSSWDYTLRVWNLY
TW*nyksfgwsyf*s*myss*wkyfskwllgyyrknlgfthwkmysyliws*f*clvhsi
rr*sfgfrwlg*ks*nlgydnw*riifigwpyriyhlysi*r**igfcckrnycl*f*fl
n*eslknilits


Translated Amino Acid sequence (All Frames)
Frame A:
vnv*yfqikirmaivlv*pv*pfevin*lvevpiql*gfgi*qpvnvy*yykvimmxlvv
yvxsmilxwqxxlwiiqlifgqlkpvncyihlqiilqvslv---

---wyygrcfkcfryxirnlidniscp**xshfnsmvgws*rskny*fllglyskslefi
hlvklqifwlvilleldvlklveif*qvalgilp*kfgiysledvfipylvivlmfgpfn
skvivwfplvgikklkfgi*qlvknyihwmaipnlsfvfnlkvvnwfllqkkllfmilil
klrifkkyinnf

Frame B:
*mfsifk*r*gwp*fwynlcnrsr**in*wkfrfnfeglgydnrsmsinitrs**wx*lf
mxdr*yxigxwxfgsfn*slvn*nrsivtfiyk*yfryllf---

---GTMGGALNVFDXPSGILLTTFHAHSDXVTSIQWWDGPEGPRIISSSWDYTLRVWNLY
TW*nyksfgwsyf*s*myss*wkyfskwllgyyrknlgfthwkmysyliws*f*clvhsi
rr*sfgfrwlg*ks*nlgydnw*riifigwpyriyhlysi*r**igfcckrnycl*f*fl
n*eslknilits

Frame C:
ECLVFSNKDKDGHSSGITCVTVRGNKLISGSSDSTLRVWDMTTGQCLLILQGHNDGVSCL
CXIDDTXLAXGSLDHSINLWSIETGQLLHSFTNNTSGISCL---

---vlwavl*mfsixhqesy*qhfmpivxeslqfnggmvlkvqellvplgiil*efgiyt
lgkttnllaghtfrvrctqvsgnilasgswdttvkiwdlltgrcihtlfghsfnvwsiqf
egnrlvsagwdkkvkiwdmttgkelysldghtesiiciqfkgsklvsaakeiivydfds*
ienl*kiy**lq

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U09362-1 (Contig-U09362-1Q)
/CSM_Contig/Contig-U09362-1Q.Seq.d
(884 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U09362-1 (Contig-U09362-1Q) /CSM_Contig/Conti... 1651 0.0
Contig-U13851-1 (Contig-U13851-1Q) /CSM_Contig/Conti... 38 0.016
Contig-U12542-1 (Contig-U12542-1Q) /CSM_Contig/Conti... 38 0.016
Contig-U14742-1 (Contig-U14742-1Q) /CSM_Contig/Conti... 36 0.062
Contig-U13937-1 (Contig-U13937-1Q) /CSM_Contig/Conti... 36 0.062
Contig-U08180-1 (Contig-U08180-1Q) /CSM_Contig/Conti... 36 0.062
Contig-U05178-1 (Contig-U05178-1Q) /CSM_Contig/Conti... 36 0.062
Contig-U14535-1 (Contig-U14535-1Q) /CSM_Contig/Conti... 34 0.25
Contig-U13996-1 (Contig-U13996-1Q) /CSM_Contig/Conti... 34 0.25
Contig-U13677-1 (Contig-U13677-1Q) /CSM_Contig/Conti... 34 0.25

>Contig-U09362-1 (Contig-U09362-1Q) /CSM_Contig/Contig-U09362-1Q.Seq.d
Length = 884

Score = 1651 bits (833), Expect = 0.0
Identities = 884/884 (100%)
Strand = Plus / Plus


Query: 1 gtgaatgtttagtattttcaaataaagataaggatggccatagttctggtataacctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgaatgtttagtattttcaaataaagataaggatggccatagttctggtataacctgtg 60


Query: 61 taaccgttcgaggtaataaattaattagtggaagttccgattcaactttgagggtttggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaccgttcgaggtaataaattaattagtggaagttccgattcaactttgagggtttggg 120


Query: 121 atatgacaaccggtcaatgtctattaatattacaaggtcataatgatggngttagttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atatgacaaccggtcaatgtctattaatattacaaggtcataatgatggngttagttgtt 180


Query: 181 tatgtangatcgatgatactanattggcaantggntctttggatcattcaattaatcttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatgtangatcgatgatactanattggcaantggntctttggatcattcaattaatcttt 240


Query: 241 ggtcaattgaaaccggtcaattgttacattcatttacaaataatacttcaggtatctctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggtcaattgaaaccggtcaattgttacattcatttacaaataatacttcaggtatctctt 300


Query: 301 gtttgnnnnnnnnnntggtactatgggcggtgctttaaatgttttcgatatnccatcagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtttgnnnnnnnnnntggtactatgggcggtgctttaaatgttttcgatatnccatcagg 360


Query: 361 aatcttattgacaacatttcatgcccatagtgatngagtcacttcaattcaatggtggga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatcttattgacaacatttcatgcccatagtgatngagtcacttcaattcaatggtggga 420


Query: 421 tggtcctgaaggtccaagaattattagttcctcttgggattatactctaagagtttggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggtcctgaaggtccaagaattattagttcctcttgggattatactctaagagtttggaa 480


Query: 481 tttatacacttggtaaaactacaaatcttttggctggtcatacttttagagttagatgta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttatacacttggtaaaactacaaatcttttggctggtcatacttttagagttagatgta 540


Query: 541 ctcaagttagtggaaatattttagcaagtggctcttgggatactaccgtaaaaatttggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctcaagttagtggaaatattttagcaagtggctcttgggatactaccgtaaaaatttggg 600


Query: 601 atttactcactggaagatgtattcataccttatttggtcatagttttaatgtttggtcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atttactcactggaagatgtattcataccttatttggtcatagttttaatgtttggtcca 660


Query: 661 ttcaattcgaaggtaatcgtttggtttccgctggttgggataaaaaagttaaaatttggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttcaattcgaaggtaatcgtttggtttccgctggttgggataaaaaagttaaaatttggg 720


Query: 721 atatgacaactggtaaagaattatattcattggatggccataccgaatctatcatttgta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atatgacaactggtaaagaattatattcattggatggccataccgaatctatcatttgta 780


Query: 781 ttcaatttaaaggtagtaaattggtttctgctgcaaaagaaattattgtttatgattttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttcaatttaaaggtagtaaattggtttctgctgcaaaagaaattattgtttatgattttg 840


Query: 841 attcttaaattgagaatctttaaaaaatatattaataacttcaa 884
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 attcttaaattgagaatctttaaaaaatatattaataacttcaa 884


>Contig-U13851-1 (Contig-U13851-1Q) /CSM_Contig/Contig-U13851-1Q.Seq.d
Length = 1677

Score = 38.2 bits (19), Expect = 0.016
Identities = 19/19 (100%)
Strand = Plus / Minus


Query: 859 tttaaaaaatatattaata 877
|||||||||||||||||||
Sbjct: 188 tttaaaaaatatattaata 170


>Contig-U12542-1 (Contig-U12542-1Q) /CSM_Contig/Contig-U12542-1Q.Seq.d
Length = 1315

Score = 38.2 bits (19), Expect = 0.016
Identities = 22/23 (95%)
Strand = Plus / Minus


Query: 228 tcaattaatctttggtcaattga 250
|||||||||||||| ||||||||
Sbjct: 330 tcaattaatctttgttcaattga 308


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,302
Number of Sequences: 6905
Number of extensions: 11302
Number of successful extensions: 1204
Number of sequences better than 10.0: 117
length of query: 884
length of database: 5,674,871
effective HSP length: 16
effective length of query: 868
effective length of database: 5,564,391
effective search space: 4829891388
effective search space used: 4829891388
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.15
Homology vs DNA
Query= Contig-U09362-1 (Contig-U09362-1Q) /CSM_Contig/Contig-U09362-1Q.Seq.d
(884 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU037741) Dictyostelium discoideum slug cDNA, clone SSE239. 1116 0.0 1
(AU072343) Dictyostelium discoideum slug cDNA, clone SSE239. 446 e-121 1
(AC171252) Bos taurus clone CH240-279E23, WORKING DRAFT SEQU... 40 0.38 3
(Z68111) S.cerevisiae chromosome XVI PCR product 3085. 42 0.42 3
(BX511009) Zebrafish DNA sequence from clone DKEYP-86F6 in l... 48 0.57 1
(CB195479) AGENCOURT_11262498 NIH_MGC_135 Mus musculus cDNA ... 48 0.57 1
(AC010735) Homo sapiens BAC clone RP11-395N3 from 2, complet... 44 1.1 4
(AC124546) Mus musculus BAC clone RP23-273G17 from chromosom... 40 1.1 4
(AC159201) Mus musculus BAC clone RP23-340E6 from chromosome... 46 2.2 1
(AC105958) Mus musculus chromosome 9, clone RP24-325P4, comp... 46 2.2 1
(AC073435) Mus musculus strain C57BL/6J chromosome 9 clone r... 46 2.2 1
(AM459915) Vitis vinifera contig VV78X036893.7, whole genome... 46 2.2 1
(ET822995) CHO_OF764xp03r1.ab1 CHO_OF Nicotiana tabacum geno... 46 2.2 1
(CU466513) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 2.9 4
(AP003331) Oryza sativa Japonica Group genomic DNA, chromoso... 40 3.3 3
(Z73616) S.cerevisiae chromosome XVI right arm DNA (7.2 kb). 42 3.4 2
(AC177026) Strongylocentrotus purpuratus clone R3-37K4, WORK... 36 3.4 5
(AC162831) Bos taurus clone CH240-124K14, WORKING DRAFT SEQU... 34 4.2 2
(BD140494) Elongation factor-2 kinase (EF-2 kinase) and meth... 34 4.4 3
(AR193041) Sequence 7 from patent US 6346406. 34 4.4 3
(U90946) Dictyostelium discoideum myosin heavy chain kinase ... 34 4.4 3
(AM486998) Vitis vinifera contig VV78X159117.5, whole genome... 34 5.1 2
(AM443679) Vitis vinifera contig VV78X136395.4, whole genome... 34 5.1 2
(EJ339909) 1092963507125 Global-Ocean-Sampling_GS-28-01-01-1... 36 5.2 2
(AM445175) Vitis vinifera contig VV78X100455.2, whole genome... 34 5.4 2
(BH968345) odj20b04.b1 B.oleracea002 Brassica oleracea genom... 34 5.4 2
(AM447186) Vitis vinifera contig VV78X088839.3, whole genome... 34 5.5 2
(DX433436) BE1075_J20_R IASMA L1 HindIII BAC library Vitis v... 34 5.7 2
(EK048762) 1092959664824 Global-Ocean-Sampling_GS-31-01-01-1... 34 5.7 2
(CU790445) A BAC library has been constructed from PN40024 g... 34 5.7 2
(DX449587) BE2019_K18_R IASMA L2 HindIII BAC library Vitis v... 34 5.8 2
(EC818307) SME00003472 esmbsro2 Sawyeria marylandensis cDNA,... 40 6.3 2
(EA102738) Sequence 121 from patent US 7195870. 40 6.3 2
(AX323653) Sequence 141 from Patent WO0192565. 40 6.3 2
(AX277958) Sequence 121 from Patent WO0177375. 40 6.3 2
(EC818505) SME00006747 esmbsro2 Sawyeria marylandensis cDNA,... 40 6.6 2
(AC216836) Populus trichocarpa clone POP013-I22, complete se... 42 8.4 2
(BX901876) Zebrafish DNA sequence from clone CH211-140G2 in ... 44 8.8 1
(AL683822) Mouse DNA sequence from clone RP23-94I24 on chrom... 44 8.8 1
(AL626761) Mouse DNA sequence from clone RP23-98L10 on chrom... 44 8.8 1
(AL513352) Mouse DNA sequence from clone RP23-180L12 on chro... 44 8.8 1
(AC174342) Medicago truncatula chromosome 6 clone mth2-166e1... 44 8.8 1
(AC146560) Medicago truncatula chromosome 6 clone mth2-12g6,... 44 8.8 1
(AE014134) Drosophila melanogaster chromosome 2L, complete s... 44 8.8 1
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 44 8.8 1
(AC008228) Drosophila melanogaster clone BACR23E23, complete... 44 8.8 1
(AC122067) Rattus norvegicus clone CH230-58N2, *** SEQUENCIN... 44 8.8 1
(AC121062) Rattus norvegicus clone CH230-72D11, *** SEQUENCI... 44 8.8 1
(AC115131) Rattus norvegicus clone CH230-101B24, *** SEQUENC... 44 8.8 1
(AC105373) Felis catus clone RP86-126J16, WORKING DRAFT SEQU... 44 8.8 1
(CU914262) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.8 1
(AC084694) Mus musculus, *** SEQUENCING IN PROGRESS ***, 2 o... 44 8.8 1
(CT827821) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.8 1
(AL954691) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 44 8.8 1
(AC017744) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 44 8.8 1
(AZ708284) RPCI-23-236L4.TV RPCI-23 Mus musculus genomic clo... 44 8.8 1
(ED768424) GM_WBb0142F18.r GM_WBb Glycine max genomic clone ... 44 8.8 1
(ED768381) GM_WBb0142E20.r GM_WBb Glycine max genomic clone ... 44 8.8 1
(DU968210) 320054 Tomato MboI BAC Library Solanum lycopersic... 44 8.8 1
(CZ729173) OC__Ba0057G13.f OC__Ba Oryza coarctata genomic cl... 44 8.8 1
(CE316441) tigr-gss-dog-17000361090570 Dog Library Canis lup... 44 8.8 1
(CE066111) tigr-gss-dog-17000322625138 Dog Library Canis lup... 44 8.8 1
(EG347606) SAAH-aac77e02.g1 Agen 0058 Schmidtea mediterranea... 44 8.8 1
(EG342215) SAAH-aab29e09.g1 Agen 0058 Schmidtea mediterranea... 44 8.8 1
(EE672455) SAAH-aab74e08.g1 Agen 0058 Schmidtea mediterranea... 44 8.8 1
(EE669918) SAAH-aac42f03.g1 Agen 0058 Schmidtea mediterranea... 44 8.8 1
(EE666496) SAAH-aab61b11.g1 Agen 0058 Schmidtea mediterranea... 44 8.8 1
(EE666086) SAAH-aab56e03.g1 Agen 0058 Schmidtea mediterranea... 44 8.8 1
(EE283858) SAAH-aab36f09.g1 Agen 0058 Schmidtea mediterranea... 44 8.8 1
(EE283522) SAAH-aab28g04.g1 Agen 0058 Schmidtea mediterranea... 44 8.8 1
(EE281326) SAAH-aaa91h02.g1 Agen 0058 Schmidtea mediterranea... 44 8.8 1
(EC617329) SAAH-aaa39c04.g1 Agen 0058 Schmidtea mediterranea... 44 8.8 1
(EC616912) SAAH-aaa30c07.g1 Agen 0058 Schmidtea mediterranea... 44 8.8 1
(EC616544) SAAH-aaa19a01.g1 Agen 0058 Schmidtea mediterranea... 44 8.8 1
(EC614319) SAAH-aaa12g05.g1 Agen 0058 Schmidtea mediterranea... 44 8.8 1
(DN313430) PL06015B1E07 cDNA from juvenile hermaphodites Sch... 44 8.8 1
(DN311472) PL06010A2B07 cDNA from juvenile hermaphodites Sch... 44 8.8 1
(DN310641) PL06008A1A05 cDNA from juvenile hermaphodites Sch... 44 8.8 1
(DN310455) PL06007B1A07 cDNA from juvenile hermaphodites Sch... 44 8.8 1
(DN310002) PL06006A2A08 cDNA from juvenile hermaphodites Sch... 44 8.8 1
(DN309818) PL06005B2A10 cDNA from juvenile hermaphodites Sch... 44 8.8 1
(BJ366357) Dictyostelium discoideum cDNA clone:ddc38n14, 5' ... 44 8.8 1
(AC129623) Homo sapiens 12 BAC CTD-2107C6 (Cal Tech Human BA... 32 9.0 5

>(AU037741) Dictyostelium discoideum slug cDNA, clone SSE239.
Length = 570

Score = 1116 bits (563), Expect = 0.0
Identities = 569/569 (100%)
Strand = Plus / Plus


Query: 316 tggtactatgggcggtgctttaaatgttttcgatatnccatcaggaatcttattgacaac 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggtactatgggcggtgctttaaatgttttcgatatnccatcaggaatcttattgacaac 60


Query: 376 atttcatgcccatagtgatngagtcacttcaattcaatggtgggatggtcctgaaggtcc 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atttcatgcccatagtgatngagtcacttcaattcaatggtgggatggtcctgaaggtcc 120


Query: 436 aagaattattagttcctcttgggattatactctaagagtttggaatttatacacttggta 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagaattattagttcctcttgggattatactctaagagtttggaatttatacacttggta 180


Query: 496 aaactacaaatcttttggctggtcatacttttagagttagatgtactcaagttagtggaa 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaactacaaatcttttggctggtcatacttttagagttagatgtactcaagttagtggaa 240


Query: 556 atattttagcaagtggctcttgggatactaccgtaaaaatttgggatttactcactggaa 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atattttagcaagtggctcttgggatactaccgtaaaaatttgggatttactcactggaa 300


Query: 616 gatgtattcataccttatttggtcatagttttaatgtttggtccattcaattcgaaggta 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatgtattcataccttatttggtcatagttttaatgtttggtccattcaattcgaaggta 360


Query: 676 atcgtttggtttccgctggttgggataaaaaagttaaaatttgggatatgacaactggta 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atcgtttggtttccgctggttgggataaaaaagttaaaatttgggatatgacaactggta 420


Query: 736 aagaattatattcattggatggccataccgaatctatcatttgtattcaatttaaaggta 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagaattatattcattggatggccataccgaatctatcatttgtattcaatttaaaggta 480


Query: 796 gtaaattggtttctgctgcaaaagaaattattgtttatgattttgattcttaaattgaga 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtaaattggtttctgctgcaaaagaaattattgtttatgattttgattcttaaattgaga 540


Query: 856 atctttaaaaaatatattaataacttcaa 884
|||||||||||||||||||||||||||||
Sbjct: 541 atctttaaaaaatatattaataacttcaa 569

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 953,234,739
Number of extensions: 57818863
Number of successful extensions: 4748817
Number of sequences better than 10.0: 84
Length of query: 884
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 860
Effective length of database: 97,308,875,965
Effective search space: 83685633329900
Effective search space used: 83685633329900
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.25
Homology vs Protein
Query= Contig-U09362-1 (Contig-U09362-1Q) /CSM_Contig/Contig-U09362-1Q.Seq.d
(884 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

CR860672_1(CR860672|pid:none) Pongo abelii mRNA; cDNA DKFZp459M2... 144 3e-33
AL953881_1(AL953881|pid:none) Zebrafish DNA sequence from clone ... 144 5e-33
AX722159_1(AX722159|pid:none) Sequence 17 from Patent WO03024999... 144 5e-33
CR859650_1(CR859650|pid:none) Pongo abelii mRNA; cDNA DKFZp459C1... 144 5e-33
(Q969H0) RecName: Full=F-box/WD repeat-containing protein 7; Alt... 144 5e-33
AK223449_1(AK223449|pid:none) Homo sapiens mRNA for F-box protei... 144 5e-33
AF383178_1(AF383178|pid:none) Homo sapiens F-box protein FBX30 m... 144 5e-33
AK032174_1(AK032174|pid:none) Mus musculus adult male olfactory ... 143 7e-33
BC037320_1(BC037320|pid:none) Homo sapiens F-box and WD-40 domai... 143 9e-33
(Q9VZF4) RecName: Full=F-box/WD repeat-containing protein 7; Alt... 136 8e-31
CR382138_317(CR382138|pid:none) Debaryomyces hansenii strain CBS... 128 3e-28
AM746676_3634(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 127 4e-28
CU633895_601(CU633895|pid:none) Podospora anserina genomic DNA c... 125 2e-27
CP000119_130(CP000119|pid:none) Anabaena variabilis ATCC 29413 p... 124 5e-27
AM920437_209(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 123 7e-27
CP001037_4818(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 123 9e-27
(Q61FW2) RecName: Full=F-box/WD repeat-containing protein sel-10... 123 9e-27
AP009552_6258(AP009552|pid:none) Microcystis aeruginosa NIES-843... 122 1e-26
BA000045_1965(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 122 2e-26
CP001291_1208(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 121 3e-26
CP000117_2804(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 121 3e-26
CP001037_5275(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 121 4e-26
CP001037_1914(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 121 4e-26
CP001037_1143(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 120 6e-26
EU652317_4(EU652317|pid:none) Philodina roseola GTP binding prot... 120 6e-26
CP000117_1553(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 120 6e-26
CP001037_1323(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 120 8e-26
(P87053) RecName: Full=F-box/WD repeat-containing protein pof1; ... 120 8e-26
AM778957_201(AM778957|pid:none) Microcystis aeruginosa PCC 7806 ... 119 1e-25
CP001037_1497(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 119 1e-25
CP000839_340(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 118 2e-25
AG2400(AG2400) WD-repeat protein [imported] - Nostoc sp. (strain... 118 3e-25
CP001037_148(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 117 4e-25
CP000828_167(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 117 5e-25
T22703(T22703)hypothetical protein F55B12.3 - Caenorhabditis ele... 117 7e-25
(Q93794) RecName: Full=F-box/WD repeat-containing protein sel-10... 117 7e-25
FM992695_153(FM992695|pid:none) Candida dubliniensis CD36 chromo... 117 7e-25
CP000117_1538(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 116 9e-25
CU633453_76(CU633453|pid:none) Podospora anserina genomic DNA ch... 116 9e-25
AI2493(AI2493) WD-repeat protein [imported] - Nostoc sp. (strain... 115 3e-24
AM270005_42(AM270005|pid:none) Aspergillus niger contig An02c010... 115 3e-24
CP000117_2838(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 114 3e-24
AY038079_1(AY038079|pid:none) Mus musculus F-box/WD40 repeat-con... 114 4e-24
BA000045_4356(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 114 4e-24
BA000045_2888(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 114 4e-24
AB014596_1(AB014596|pid:none) Homo sapiens mRNA for KIAA0696 pro... 114 6e-24
(Q9UKB1) RecName: Full=F-box/WD repeat-containing protein 11; Al... 114 6e-24
AB033279_1(AB033279|pid:none) Homo sapiens BTRCP2 mRNA for F-box... 114 6e-24
AF032878_1(AF032878|pid:none) Drosophila melanogaster Slimb (sli... 113 7e-24
AJ721075_1(AJ721075|pid:none) Gallus gallus mRNA for hypothetica... 113 7e-24
CP001291_1144(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 113 1e-23
AP007175_262(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 112 1e-23
AB093260_1(AB093260|pid:none) Mus musculus mRNA for mKIAA0696 pr... 112 1e-23
BC034261_1(BC034261|pid:none) Mus musculus F-box and WD-40 domai... 112 1e-23
AK149139_1(AK149139|pid:none) Mus musculus 2 days neonate sympat... 112 1e-23
AK313417_1(AK313417|pid:none) Homo sapiens cDNA, FLJ93955, highl... 112 2e-23
BC123621_1(BC123621|pid:none) Bos taurus beta-transducin repeat ... 112 2e-23
(Q91854) RecName: Full=Beta-TrCP; AltName: Full=Beta-transducin ... 112 2e-23
CR749295_1(CR749295|pid:none) Homo sapiens mRNA; cDNA DKFZp781N0... 112 2e-23
AK295870_1(AK295870|pid:none) Homo sapiens cDNA FLJ54002 complet... 112 2e-23
AF129530_1(AF129530|pid:none) Homo sapiens chromosome 10 F-box p... 112 2e-23
AB169034_1(AB169034|pid:none) Macaca fascicularis testis cDNA, c... 112 2e-23
CR382131_627(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 111 4e-23
BC056809_1(BC056809|pid:none) Danio rerio F-box and WD-40 domain... 111 4e-23
CP001344_1900(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 111 4e-23
AP007159_390(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 110 6e-23
CU074270_1(CU074270|pid:none) Podospora anserina genomic DNA, NW... 110 6e-23
CP001037_247(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 110 6e-23
CP001037_1432(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 110 6e-23
BC085125_1(BC085125|pid:none) Rattus norvegicus beta-transducin ... 110 8e-23
CP001291_2528(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 110 8e-23
AK156660_1(AK156660|pid:none) Mus musculus activated spleen cDNA... 110 8e-23
AF081887_1(AF081887|pid:none) Mus musculus ubiquitin ligase FWD1... 110 8e-23
CU928165_104(CU928165|pid:none) Kluyveromyces thermotolerans str... 109 1e-22
CP000828_5861(CP000828|pid:none) Acaryochloris marina MBIC11017,... 109 1e-22
CP001037_5630(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 109 1e-22
BC045356_1(BC045356|pid:none) Danio rerio F-box and WD-40 domain... 109 1e-22
CP000807_36(CP000807|pid:none) Cyanothece sp. ATCC 51142 linear ... 109 1e-22
CP000117_4653(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 108 2e-22
T16607(T16607)hypothetical protein K10B2.1 - Caenorhabditis eleg... 108 2e-22
AE017341_662(AE017341|pid:none) Cryptococcus neoformans var. neo... 108 2e-22
BT075698_1(BT075698|pid:none) Osmerus mordax clone omor-rgc-001-... 108 2e-22
CR380958_103(CR380958|pid:none) Candida glabrata strain CBS138 c... 108 3e-22
AM920435_1436(AM920435|pid:none) Penicillium chrysogenum Wiscons... 108 3e-22
CP000686_859(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 108 3e-22
CR382126_1174(CR382126|pid:none) Kluyveromyces lactis strain NRR... 107 4e-22
AF112979_1(AF112979|pid:none) Mus musculus beta-transducin repea... 107 5e-22
CP000117_5003(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 107 7e-22
(P07834) RecName: Full=Cell division control protein 4; AltName:... 107 7e-22
AM746676_8405(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 106 9e-22
AP009552_3821(AP009552|pid:none) Microcystis aeruginosa NIES-843... 106 9e-22
CU074274_1(CU074274|pid:none) Podospora anserina genomic DNA, NW... 106 1e-21
AC159435_6(AC159435|pid:none) Trypanosoma brucei chromosome 8 cl... 105 2e-21
FN392320_711(FN392320|pid:none) Pichia pastoris GS115 chromosome... 105 2e-21
CP000117_3846(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 105 2e-21
CR382124_306(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 105 3e-21
AH2195(AH2195) hypothetical protein alr3119 [imported] - Nostoc ... 104 3e-21
CP000117_2488(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 104 4e-21
AB076893_1(AB076893|pid:none) Ciona intestinalis Ci-betaTrCP mRN... 104 4e-21
CP001328_404(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 103 6e-21
CP000492_814(CP000492|pid:none) Chlorobium phaeobacteroides DSM ... 103 6e-21
AF339101_1(AF339101|pid:none) Heterodera glycines beta-transduci... 103 6e-21
DQ151642_1(DQ151642|pid:none) Chlamydomonas reinhardtii WD repea... 103 1e-20
BA000045_4351(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 103 1e-20
CP000806_2172(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 102 1e-20
(Q01277) RecName: Full=Sulfur controller 2; Short=SCON2... 102 1e-20
CP000845_57(CP000845|pid:none) Acaryochloris marina MBIC11017 pl... 102 1e-20
(Q5FWQ6) RecName: Full=WD repeat-containing protein 69; &BC0892... 102 2e-20
CU633900_125(CU633900|pid:none) Podospora anserina genomic DNA c... 102 2e-20
CP000117_2617(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 102 2e-20
(Q8YTC2) RecName: Full=Uncharacterized WD repeat-containing prot... 102 2e-20
CP000828_5196(CP000828|pid:none) Acaryochloris marina MBIC11017,... 102 2e-20
AE1810(AE1810) WD-40 repeat protein [imported] - Nostoc sp. (str... 102 2e-20
AF323583_1(AF323583|pid:none) Podospora anserina beta transducin... 102 2e-20
AP007163_34(AP007163|pid:none) Aspergillus oryzae RIB40 genomic ... 101 3e-20
CR954209_40(CR954209|pid:none) Ostreococcus tauri strain OTTH059... 101 3e-20
CP000117_4826(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 101 4e-20
(Q6P2Y2) RecName: Full=WD repeat-containing protein 69; &BC0642... 101 4e-20
CP000589_46(CP000589|pid:none) Ostreococcus lucimarinus CCE9901 ... 100 6e-20
AF323582_1(AF323582|pid:none) Podospora anserina beta transducin... 100 6e-20
AF323584_1(AF323584|pid:none) Podospora anserina beta transducin... 100 6e-20
(Q0P593) RecName: Full=WD repeat-containing protein 69; &BC1203... 100 1e-19
(Q5BK30) RecName: Full=WD repeat-containing protein 69; &BC0912... 100 1e-19
(Q00808) RecName: Full=Vegetative incompatibility protein HET-E-... 99 1e-19
BC124403_1(BC124403|pid:none) Danio rerio WD repeat domain 69, m... 99 1e-19
AY685231_1(AY685231|pid:none) Neurospora crassa F-box/WD-40 repe... 99 1e-19
AM746676_2689(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 99 1e-19
AF1890(AF1890) WD-repeat protein [imported] - Nostoc sp. (strain... 99 1e-19
(Q1LV15) RecName: Full=WD repeat-containing protein 69; &BC1244... 99 1e-19
AK016201_1(AK016201|pid:none) Mus musculus adult male testis cDN... 99 2e-19
AK098821_1(AK098821|pid:none) Homo sapiens cDNA FLJ25955 fis, cl... 99 2e-19
(Q8N136) RecName: Full=WD repeat-containing protein 69; &AC0730... 99 2e-19
AK301861_1(AK301861|pid:none) Homo sapiens cDNA FLJ54195 complet... 99 2e-19
AF323585_1(AF323585|pid:none) Podospora anserina beta transducin... 99 2e-19
CP000828_3726(CP000828|pid:none) Acaryochloris marina MBIC11017,... 98 3e-19
CU928178_153(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 98 4e-19
AE016820_345(AE016820|pid:none) Ashbya gossypii (= Eremothecium ... 97 7e-19
CP001099_1375(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 97 7e-19
CP000148_1200(CP000148|pid:none) Geobacter metallireducens GS-15... 97 7e-19
CP000828_5917(CP000828|pid:none) Acaryochloris marina MBIC11017,... 96 1e-18
CP001108_1939(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 92 1e-18
AP007159_126(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 96 2e-18
AB070844_1(AB070844|pid:none) Aspergillus oryzae sconB gene for ... 96 2e-18
(A8PTE4) RecName: Full=Mitochondrial division protein 1; 96 2e-18
DQ647383_1(DQ647383|pid:none) Chlamydomonas reinhardtii lissence... 96 2e-18
AM270009_6(AM270009|pid:none) Aspergillus niger contig An02c0140... 95 3e-18
CP000828_160(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 95 3e-18
(Q54R82) RecName: Full=Mitogen-activated protein kinase kinase k... 95 3e-18
(Q00659) RecName: Full=Sulfur metabolite repression control prot... 94 6e-18
U21220_1(U21220|pid:none) Emericella nidulans sulfur metabolite ... 94 6e-18
FM992688_103(FM992688|pid:none) Candida dubliniensis CD36 chromo... 94 8e-18
CP001099_247(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 94 8e-18
CP000842_108(CP000842|pid:none) Acaryochloris marina MBIC11017 p... 94 8e-18
CP000844_164(CP000844|pid:none) Acaryochloris marina MBIC11017 p... 93 1e-17
CP000828_20(CP000828|pid:none) Acaryochloris marina MBIC11017, c... 93 1e-17
CP001101_2134(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 93 1e-17
AK131383_1(AK131383|pid:none) Homo sapiens cDNA FLJ16457 fis, cl... 89 2e-17
CP001097_2083(CP001097|pid:none) Chlorobium limicola DSM 245, co... 92 2e-17
AH2154(AH2154) WD-repeat protein [imported] - Nostoc sp. (strain... 92 2e-17
AC1842(AC1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 92 2e-17
S62507(T38502;S62507) hypothetical trp-asp repeat-containing pro... 92 3e-17
(Q5JTN6) RecName: Full=WD repeat-containing protein 38; &AL3549... 91 4e-17
CP001324_582(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 91 5e-17
CP000108_212(CP000108|pid:none) Chlorobium chlorochromatii CaD3,... 90 1e-16
CP000393_1925(CP000393|pid:none) Trichodesmium erythraeum IMS101... 90 1e-16
CP001110_343(CP001110|pid:none) Pelodictyon phaeoclathratiforme ... 89 1e-16
CR382128_375(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 89 1e-16
(Q9D994) RecName: Full=WD repeat-containing protein 38; &AK0072... 89 2e-16
CU074316_1(CU074316|pid:none) Podospora anserina genomic DNA, NW... 89 3e-16
CU640366_848(CU640366|pid:none) Podospora anserina genomic DNA c... 89 3e-16
CP000828_5338(CP000828|pid:none) Acaryochloris marina MBIC11017,... 89 3e-16
FN357920_1(FN357920|pid:none) Schistosoma mansoni genome sequenc... 89 3e-16
AP009552_1750(AP009552|pid:none) Microcystis aeruginosa NIES-843... 88 3e-16
AE2490(AE2490) WD-repeat protein [imported] - Nostoc sp. (strain... 88 3e-16
FN313596_1(FN313596|pid:none) Schistosoma japonicum isolate Anhu... 88 4e-16
CP000113_4019(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 88 4e-16
(Q8I0F4) RecName: Full=Lissencephaly-1 homolog; AltName: Full=Dd... 88 4e-16
AP007155_937(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 87 6e-16
(Q9D7H2) RecName: Full=WD repeat-containing protein 5B; &AK0092... 87 7e-16
CP000119_93(CP000119|pid:none) Anabaena variabilis ATCC 29413 pl... 87 1e-15
CP000117_2141(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 86 2e-15
CP001037_6067(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 86 2e-15
BC077844_1(BC077844|pid:none) Xenopus laevis WD repeat domain 5,... 78 2e-15
AJ011376_1(AJ011376|pid:none) Homo sapiens mRNA for hypothetical... 77 3e-15
(Q5M786) RecName: Full=WD repeat-containing protein 5; &BC08100... 77 3e-15
(Q2KIG2) RecName: Full=WD repeat-containing protein 5; &BC11265... 77 3e-15
BC052124_1(BC052124|pid:none) Danio rerio WD repeat domain 5, mR... 77 3e-15
AM920427_1285(AM920427|pid:none) Penicillium chrysogenum Wiscons... 85 3e-15
CR382136_634(CR382136|pid:none) Debaryomyces hansenii strain CBS... 85 3e-15
AK144091_1(AK144091|pid:none) Mus musculus RCB-0559 K-1 . F1 cDN... 77 4e-15
CR382128_858(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 85 4e-15
CP000806_3920(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 85 4e-15
BT072537_1(BT072537|pid:none) Salmo salar clone ssal-rgf-529-231... 85 4e-15
CU928165_162(CU928165|pid:none) Kluyveromyces thermotolerans str... 85 4e-15
(Q6CB13) RecName: Full=Mitochondrial division protein 1; &CR382... 85 4e-15
FM992691_442(FM992691|pid:none) Candida dubliniensis CD36 chromo... 84 5e-15
CP000393_1374(CP000393|pid:none) Trichodesmium erythraeum IMS101... 84 6e-15
EF661023_4(EF661023|pid:none) Carica papaya clone BAC PH61H02, c... 84 6e-15
AP007175_233(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 84 6e-15
FN314118_1(FN314118|pid:none) Schistosoma japonicum isolate Anhu... 84 8e-15
AP007169_1(AP007169|pid:none) Aspergillus oryzae RIB40 genomic D... 84 8e-15
CP000686_3299(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 83 1e-14
AL732349_11(AL732349|pid:none) Oryza sativa genomic DNA, chromos... 83 1e-14
AL606668_18(AL606668|pid:none) Oryza sativa genomic DNA, chromos... 83 1e-14
BA000045_2655(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 82 2e-14
CU928176_715(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 82 2e-14
CU638744_464(CU638744|pid:none) Podospora anserina genomic DNA c... 82 2e-14
BC031227_1(BC031227|pid:none) Homo sapiens WD repeat domain 88, ... 81 4e-14
AM269977_20(AM269977|pid:none) Aspergillus niger contig An01c030... 81 4e-14
BC148666_1(BC148666|pid:none) Synthetic construct Homo sapiens c... 81 4e-14
(Q6ZMY6) RecName: Full=WD repeat-containing protein 88; AltName:... 81 4e-14
CP000806_1073(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 57 5e-14
CP000117_2178(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 81 5e-14
CU633900_158(CU633900|pid:none) Podospora anserina genomic DNA c... 81 5e-14
AC087851_1(AC087851|pid:none) Oryza sativa chromosome 3 BAC OSJN... 81 5e-14
AK111863_1(AK111863|pid:none) Oryza sativa Japonica Group cDNA c... 81 5e-14
AM502224_3(AM502224|pid:none) Leishmania infantum chromosome 6. 81 5e-14
AJ575934_4(AJ575934|pid:none) Micromonospora purpurea DOS biosyn... 80 7e-14
CP000839_184(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 80 7e-14
AJ628149_32(AJ628149|pid:none) Micromonospora echinospora genomi... 80 7e-14
AC117075_70(AC117075|pid:none) Dictyostelium discoideum chromoso... 80 9e-14
(Q5RE95) RecName: Full=WD repeat-containing protein 5B; &CR8576... 72 1e-13
CP000501_12(CP000501|pid:none) Pichia stipitis CBS 6054 chromoso... 80 1e-13
CP001344_3209(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 80 1e-13
AE013599_2876(AE013599|pid:none) Drosophila melanogaster chromos... 80 1e-13
AK002149_1(AK002149|pid:none) Homo sapiens cDNA FLJ11287 fis, cl... 72 1e-13
BC158602_1(BC158602|pid:none) Rattus norvegicus sperm associated... 74 1e-13
EF083131_1(EF083131|pid:none) Picea sitchensis clone WS02722_J02... 79 2e-13
AM462218_2(AM462218|pid:none) Vitis vinifera contig VV78X125617.... 79 2e-13
(Q758R7) RecName: Full=Mitochondrial division protein 1; &AE016... 79 2e-13
AY065425_1(AY065425|pid:none) Arabidopsis thaliana unknown prote... 79 2e-13
AE017346_214(AE017346|pid:none) Cryptococcus neoformans var. neo... 79 2e-13
DQ122897_1(DQ122897|pid:none) Chlamydomonas incerta G protein be... 79 3e-13
(Q8W1K8) RecName: Full=Protein Mut11; AltName: Full=Mut11p; &AF... 79 3e-13
CP000806_3916(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 79 3e-13
(P25387) RecName: Full=Guanine nucleotide-binding protein subuni... 79 3e-13
AL392174_12(AL392174|pid:none) Arabidopsis thaliana DNA chromoso... 79 3e-13
AY812578_1(AY812578|pid:none) Schistosoma japonicum SJCHGC09556 ... 78 3e-13
CU633438_612(CU633438|pid:none) Podospora anserina genomic DNA c... 78 3e-13
AP007150_220(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 78 3e-13
AF310672_1(AF310672|pid:none) Homo sapiens PF20 variant 1a (PF20... 78 4e-13
AB169014_1(AB169014|pid:none) Macaca fascicularis testis cDNA, c... 78 4e-13
FN357354_71(FN357354|pid:none) Schistosoma mansoni genome sequen... 78 4e-13
CP000393_3212(CP000393|pid:none) Trichodesmium erythraeum IMS101... 78 4e-13
AM746676_4559(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 55 6e-13
(P49695) RecName: Full=Probable serine/threonine-protein kinase ... 77 6e-13
AL772282_6(AL772282|pid:none) Mouse DNA sequence from clone RP23... 77 6e-13
(P39014) RecName: Full=F-box protein MET30; AltName: Full=Methio... 75 7e-13
L26505_1(L26505|pid:none) Saccharomyces cerevisiae Met30p gene, ... 75 7e-13
AP009552_5466(AP009552|pid:none) Microcystis aeruginosa NIES-843... 77 8e-13
AC129717_13(AC129717|pid:none) Oryza sativa (japonica cultivar-g... 77 8e-13
CP000686_3296(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 77 1e-12
AP003224_20(AP003224|pid:none) Oryza sativa Japonica Group genom... 76 1e-12
AD1842(AD1842) WD-40 repeat protein [imported] - Nostoc sp. (str... 76 2e-12
AY738474_1(AY738474|pid:none) Gemmata sp. Wa1-1 WD-repeat protei... 76 2e-12
AE017348_264(AE017348|pid:none) Cryptococcus neoformans var. neo... 76 2e-12
BT001736_1(BT001736|pid:none) Drosophila melanogaster RE72568 fu... 76 2e-12
(Q8H0T9) RecName: Full=Katanin p80 WD40 repeat-containing subuni... 76 2e-12
CP000393_2151(CP000393|pid:none) Trichodesmium erythraeum IMS101... 53 2e-12
CR940353_257(CR940353|pid:none) Theileria annulata strain Ankara... 75 2e-12
(Q8N0X2) RecName: Full=Sperm-associated antigen 16 protein; AltN... 75 2e-12
CR749477_1(CR749477|pid:none) Homo sapiens mRNA; cDNA DKFZp781G1... 75 2e-12
FN392320_453(FN392320|pid:none) Pichia pastoris GS115 chromosome... 75 2e-12
AK302351_1(AK302351|pid:none) Homo sapiens cDNA FLJ53372 complet... 75 2e-12
BC025379_1(BC025379|pid:none) Homo sapiens sperm associated anti... 75 2e-12
AP007175_253(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 75 3e-12
EU952736_1(EU952736|pid:none) Zea mays clone 1287276 guanine nuc... 75 3e-12
U63922_1(U63922|pid:none) Xenopus laevis beta-transducin repeat ... 75 3e-12
BT086255_1(BT086255|pid:none) Zea mays full-length cDNA clone ZM... 75 3e-12
CP000828_3398(CP000828|pid:none) Acaryochloris marina MBIC11017,... 75 3e-12
U63921_1(U63921|pid:none) Xenopus laevis beta-transducin repeat ... 75 3e-12
BA000039_488(BA000039|pid:none) Thermosynechococcus elongatus BP... 75 4e-12
U27537_1(U27537|pid:none) Dictyostelium discoideum G beta like p... 75 4e-12
BT055706_1(BT055706|pid:none) Zea mays full-length cDNA clone ZM... 75 4e-12
(A4RJV3) RecName: Full=Mitochondrial division protein 1; 75 4e-12
CT005245_3(CT005245|pid:none) Leishmania major strain Friedlin, ... 75 4e-12
AE016818_604(AE016818|pid:none) Ashbya gossypii (= Eremothecium ... 74 5e-12
AG1889(AG1889) WD-40 repeat protein [imported] - Nostoc sp. (str... 74 5e-12
AP008216_940(AP008216|pid:none) Oryza sativa (japonica cultivar-... 74 5e-12
AF407335_1(AF407335|pid:none) Lentinula edodes guanine nucleotid... 74 5e-12
AY588074_1(AY588074|pid:none) Homalodisca coagulata putative act... 69 6e-12
S19487(S19487;S26657)hypothetical protein YCR072c - yeast (Sacch... 74 6e-12
CP001013_1798(CP001013|pid:none) Leptothrix cholodnii SP-6, comp... 74 6e-12
BC145995_1(BC145995|pid:none) Mus musculus WD repeat domain 69, ... 74 6e-12
CP000393_145(CP000393|pid:none) Trichodesmium erythraeum IMS101,... 74 6e-12
CP001037_4354(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 74 6e-12
AK016977_1(AK016977|pid:none) Mus musculus adult male testis cDN... 74 6e-12
(P25382) RecName: Full=WD repeat-containing protein YCR072C; &A... 74 6e-12
BA000045_1630(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 74 8e-12
AB264260_1(AB264260|pid:none) Cryptomeria japonica CC2196 gene f... 74 8e-12
AB264259_1(AB264259|pid:none) Cryptomeria japonica CC2196 gene f... 74 8e-12
BC075548_1(BC075548|pid:none) Xenopus tropicalis MGC89488 protei... 74 8e-12
AM910987_42(AM910987|pid:none) Plasmodium knowlesi strain H chro... 73 1e-11
EF144649_1(EF144649|pid:none) Populus trichocarpa clone WS01116_... 73 1e-11
CP001327_247(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 73 1e-11
(Q5AXW3) RecName: Full=Mitochondrial division protein 1; 73 1e-11
BA000045_725(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D... 73 1e-11
(Q9FLX9) RecName: Full=Notchless protein homolog; &AB009055_3(A... 73 1e-11
CP000393_3289(CP000393|pid:none) Trichodesmium erythraeum IMS101... 73 1e-11
AP004312_39(AP004312|pid:none) Synechocystis sp. PCC 6803 plasmi... 73 1e-11
BT071278_1(BT071278|pid:none) Picea sitchensis clone WS02817_P12... 73 1e-11
AP009552_3560(AP009552|pid:none) Microcystis aeruginosa NIES-843... 73 1e-11
AP003517_26(AP003517|pid:none) Oryza sativa Japonica Group genom... 73 1e-11
(A7THX0) RecName: Full=Mitochondrial division protein 1; 73 1e-11
AF391290_3(AF391290|pid:none) Branchiostoma floridae cosmid MPMG... 73 1e-11
(P49027) RecName: Full=Guanine nucleotide-binding protein subuni... 73 1e-11
AY463620_1(AY463620|pid:none) Arabidopsis thaliana TAF5 (At5g251... 73 1e-11
CU928169_663(CU928169|pid:none) Kluyveromyces thermotolerans str... 73 1e-11
AF125254_1(AF125254|pid:none) Leishmania panamensis activated pr... 72 2e-11
CU928176_157(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 72 2e-11
CP001037_139(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 72 2e-11
CP000393_3425(CP000393|pid:none) Trichodesmium erythraeum IMS101... 72 2e-11
CR380959_230(CR380959|pid:none) Candida glabrata strain CBS138 c... 72 2e-11
AP009493_3398(AP009493|pid:none) Streptomyces griseus subsp. gri... 72 2e-11
CP000839_311(CP000839|pid:none) Acaryochloris marina MBIC11017 p... 72 3e-11
A55532(A55532) myosin-heavy-chain kinase (EC 2.7.1.129) A - slim... 72 3e-11
AX969973_1(AX969973|pid:none) Sequence 776 from Patent EP1104808. 72 3e-11
CP001037_2838(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 72 3e-11
AM778874_8(AM778874|pid:none) Microcystis aeruginosa PCC 7806 ge... 72 3e-11
AK304508_1(AK304508|pid:none) Homo sapiens cDNA FLJ57449 complet... 72 3e-11
(Q5SUS0) RecName: Full=F-box/WD repeat-containing protein 10; Al... 72 3e-11
CP000393_2802(CP000393|pid:none) Trichodesmium erythraeum IMS101... 57 4e-11
(Q9NDC9) RecName: Full=Lissencephaly-1 homolog; AltName: Full=Pr... 71 4e-11
AC007259_17(AC007259|pid:none) Arabidopsis thaliana chromosome I... 71 4e-11
AP008213_479(AP008213|pid:none) Oryza sativa (japonica cultivar-... 71 4e-11
AM920427_459(AM920427|pid:none) Penicillium chrysogenum Wisconsi... 71 4e-11
AB264263_1(AB264263|pid:none) Chamaecyparis pisifera CC2196 gene... 71 4e-11
BT071642_1(BT071642|pid:none) Picea sitchensis clone WS0293_L13 ... 71 4e-11
AB264261_1(AB264261|pid:none) Thujopsis dolabrata CC2196 gene fo... 71 4e-11
AB264266_1(AB264266|pid:none) Chamaecyparis obtusa CC2196 gene f... 71 4e-11
AF100286_1(AF100286|pid:none) Trypanosoma congolense strain IL11... 71 5e-11
(Q17963) RecName: Full=WD repeat-containing protein tag-125; &T... 71 5e-11
(Q95RJ9) RecName: Full=F-box-like/WD repeat-containing protein e... 71 5e-11
AB246881_1(AB246881|pid:none) Lethenteron japonicum GNB2L1 mRNA ... 71 5e-11
BC081860_1(BC081860|pid:none) Rattus norvegicus similar to Charc... 71 5e-11
AP007157_289(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 64 6e-11
AB018110_4(AB018110|pid:none) Arabidopsis thaliana genomic DNA, ... 70 7e-11
(A2R3Z3) RecName: Full=Mitochondrial division protein 1; 70 7e-11
AY174059_1(AY174059|pid:none) Plasmodium falciparum activated pr... 70 7e-11
FN357410_12(FN357410|pid:none) Schistosoma mansoni genome sequen... 70 7e-11
AL078635_13(AL078635|pid:none) Amycolatopsis orientalis cosmid p... 70 7e-11
AM270325_97(AM270325|pid:none) Aspergillus niger contig An14c018... 70 7e-11
CP000502_174(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 70 7e-11
AP007151_34(AP007151|pid:none) Aspergillus oryzae RIB40 genomic ... 70 7e-11
(Q8BHB4) RecName: Full=WD repeat-containing protein 3; &AK05073... 70 7e-11
(Q6PBD6) RecName: Full=WD repeat-containing protein 61; &BC0597... 70 7e-11
(Q6GMD2) RecName: Full=WD repeat-containing protein 61; &BC0741... 69 8e-11
AM441735_1(AM441735|pid:none) Vitis vinifera contig VV78X156877.... 70 9e-11
CR812943_6(CR812943|pid:none) Zebrafish DNA sequence from clone ... 70 9e-11
U96491_1(U96491|pid:none) Drosophila melanogaster RACK1 (rack1) ... 70 9e-11
AY737531_1(AY737531|pid:none) Toxoptera citricida putative activ... 70 9e-11
CP000828_671(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 70 9e-11
S33263(S33263;S45729;A54593)transcription initiation factor IID-... 70 9e-11
BC141212_1(BC141212|pid:none) Mus musculus F-box and WD-40 domai... 70 9e-11
(P49846) RecName: Full=Transcription initiation factor TFIID sub... 70 9e-11
CU633454_82(CU633454|pid:none) Podospora anserina genomic DNA ch... 70 9e-11
CP000117_173(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 70 9e-11
AF323581_1(AF323581|pid:none) Podospora anserina beta transducin... 70 9e-11
CU074315_1(CU074315|pid:none) Podospora anserina genomic DNA, NW... 70 9e-11
AC073555_19(AC073555|pid:none) Arabidopsis thaliana chromosome 1... 70 1e-10
(P62883) RecName: Full=Guanine nucleotide-binding protein subuni... 70 1e-10
CP000828_4370(CP000828|pid:none) Acaryochloris marina MBIC11017,... 70 1e-10
AF034793_1(AF034793|pid:none) Leishmania donovani activated prot... 70 1e-10
BC136340_1(BC136340|pid:none) Homo sapiens TAF5 RNA polymerase I... 70 1e-10
AK088953_1(AK088953|pid:none) Mus musculus 2 days neonate thymus... 70 1e-10
U75309_1(U75309|pid:none) Human TBP-associated factor (hTAFII100... 70 1e-10
BC052268_1(BC052268|pid:none) Homo sapiens TAF5 RNA polymerase I... 70 1e-10
(Q15542) RecName: Full=Transcription initiation factor TFIID sub... 70 1e-10
BC150407_1(BC150407|pid:none) Danio rerio guanine nucleotide bin... 70 1e-10
(Q90ZL4) RecName: Full=Lissencephaly-1 homolog B; &AY032881_1(A... 70 1e-10
(Q8C092) RecName: Full=Transcription initiation factor TFIID sub... 70 1e-10
BC156180_1(BC156180|pid:none) Synthetic construct Mus musculus c... 70 1e-10
EU016105_1(EU016105|pid:none) Leishmania donovani chagasi activa... 70 1e-10
AE010299_2454(AE010299|pid:none) Methanosarcina acetivorans str.... 57 1e-10
CP000089_3569(CP000089|pid:none) Dechloromonas aromatica RCB, co... 69 2e-10
(Q91WQ5) RecName: Full=TAF5-like RNA polymerase II p300/CBP-asso... 69 2e-10
AC133571_4(AC133571|pid:none) Medicago truncatula clone mth2-10h... 69 2e-10
AK105499_1(AK105499|pid:none) Oryza sativa Japonica Group cDNA c... 69 2e-10
(P74442) RecName: Full=Uncharacterized WD repeat-containing prot... 69 2e-10
BC160901_1(BC160901|pid:none) Rattus norvegicus TAF5-like RNA po... 69 2e-10
CP001100_2468(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 64 2e-10
CR382138_945(CR382138|pid:none) Debaryomyces hansenii strain CBS... 69 2e-10
AM910992_223(AM910992|pid:none) Plasmodium knowlesi strain H chr... 69 2e-10
S36113(S36113)LIS-1 protein - human 69 2e-10
AK147793_1(AK147793|pid:none) Mus musculus melanocyte cDNA, RIKE... 69 2e-10
(P43034) RecName: Full=Platelet-activating factor acetylhydrolas... 69 2e-10
(Q9GL51) RecName: Full=Platelet-activating factor acetylhydrolas... 69 2e-10
AK147309_1(AK147309|pid:none) Mus musculus adult male brain UNDE... 69 2e-10
(P69103) RecName: Full=Guanine nucleotide-binding protein subuni... 69 2e-10
AK167824_1(AK167824|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 69 2e-10
(P93107) RecName: Full=Flagellar WD repeat-containing protein Pf... 69 2e-10
AY080732_1(AY080732|pid:none) Arabidopsis thaliana unknown prote... 69 2e-10
L25109_1(L25109|pid:none) Mus musculus LIS mRNA, partial cds. 69 2e-10
CT573213_6188(CT573213|pid:none) Frankia alni str. ACN14A chromo... 69 2e-10
L13387_1(L13387|pid:none) Homo sapiens (clone 6-1) Miller-Dieker... 69 2e-10
CP001577_363(CP001577|pid:none) Micromonas sp. RCC299 chromosome... 69 2e-10
DQ213259_1(DQ213259|pid:none) Taeniopygia guttata clone 0061P001... 69 3e-10
(Q8BG40) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 69 3e-10
(Q9BVA0) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 69 3e-10
AK010364_1(AK010364|pid:none) Mus musculus ES cells cDNA, RIKEN ... 69 3e-10
AY608603_1(AY608603|pid:none) Exophiala dermatitidis Tup1p gene,... 69 3e-10
BC149991_1(BC149991|pid:none) Bos taurus katanin p80 (WD repeat ... 69 3e-10
A96638(A96638) hypothetical protein F11P17.7 [imported] - Arabid... 69 3e-10
AY130394_1(AY130394|pid:none) Petromyzon marinus guanine nucleot... 69 3e-10
AK031630_1(AK031630|pid:none) Mus musculus 13 days embryo male t... 69 3e-10
(P43033) RecName: Full=Platelet-activating factor acetylhydrolas... 69 3e-10
AY891382_1(AY891382|pid:none) Synthetic construct Homo sapiens c... 69 3e-10
CR940353_254(CR940353|pid:none) Theileria annulata strain Ankara... 69 3e-10
(Q5ZJH5) RecName: Full=WD repeat-containing protein 61; &AJ7204... 69 3e-10
BC125774_1(BC125774|pid:none) Xenopus tropicalis novel protein c... 69 3e-10
CP001325_706(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 68 4e-10
BT045543_1(BT045543|pid:none) Salmo salar clone ssal-rgf-524-224... 68 4e-10
AF016369_1(AF016369|pid:none) Homo sapiens U4/U6 small nuclear r... 68 4e-10
AL449305_7(AL449305|pid:none) Human DNA sequence from clone RP11... 68 4e-10
BC056720_1(BC056720|pid:none) Danio rerio PRP4 pre-mRNA processi... 68 4e-10
(Q5REG7) RecName: Full=Platelet-activating factor acetylhydrolas... 68 4e-10
EU290652_1(EU290652|pid:none) Sander vitreus receptor for activa... 68 4e-10
(Q3MHE2) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 68 4e-10
AJ001774_6(AJ001774|pid:none) Anabaena sp. PCC 7120 DNA downstre... 68 4e-10
BT045765_1(BT045765|pid:none) Salmo salar clone ssal-rgf-530-312... 68 4e-10
CP000593_141(CP000593|pid:none) Ostreococcus lucimarinus CCE9901... 68 4e-10
CR457105_1(CR457105|pid:none) Homo sapiens full open reading fra... 68 4e-10
BT034751_1(BT034751|pid:none) Zea mays full-length cDNA clone ZM... 55 4e-10
AK301029_1(AK301029|pid:none) Homo sapiens cDNA FLJ60170 complet... 63 4e-10
AY547291_1(AY547291|pid:none) Toxoplasma gondii receptor for act... 68 5e-10
(Q7RY30) RecName: Full=Nuclear distribution protein pac-1a; AltN... 68 5e-10
(Q9PTR5) RecName: Full=Platelet-activating factor acetylhydrolas... 68 5e-10
AM472166_2(AM472166|pid:none) Vitis vinifera contig VV78X131919.... 68 5e-10
BC161681_1(BC161681|pid:none) Xenopus laevis TBP-associated fact... 68 5e-10
BC168104_1(BC168104|pid:none) Xenopus tropicalis cDNA clone MGC:... 68 5e-10
AC130611_1(AC130611|pid:none) Oryza sativa (japonica cultivar-gr... 67 6e-10
AY082798_1(AY082798|pid:none) Penicillium marneffei TupA protein... 67 6e-10
FM992693_193(FM992693|pid:none) Candida dubliniensis CD36 chromo... 67 6e-10
(Q5ZIU8) RecName: Full=Katanin p80 WD40-containing subunit B1; ... 67 6e-10
AP008211_1692(AP008211|pid:none) Oryza sativa (japonica cultivar... 67 6e-10
AK313131_1(AK313131|pid:none) Homo sapiens cDNA, FLJ93619, highl... 67 6e-10
(O75529) RecName: Full=TAF5-like RNA polymerase II p300/CBP-asso... 67 6e-10
AC132491_12(AC132491|pid:none) Oryza sativa (japonica cultivar-g... 67 6e-10
DQ410670_1(DQ410670|pid:none) Gallus gallus brain p80 katanin mR... 67 6e-10
AJ009770_1(AJ009770|pid:none) Homo sapiens mRNA for putative tra... 67 6e-10
(Q803D2) RecName: Full=Lissencephaly-1 homolog B; &BC044530_1(B... 67 6e-10
BT064699_1(BT064699|pid:none) Zea mays full-length cDNA clone ZM... 65 6e-10
BT037412_1(BT037412|pid:none) Zea mays full-length cDNA clone ZM... 64 6e-10
DQ885470_1(DQ885470|pid:none) Blattella germanica receptor for a... 65 6e-10
EU961763_1(EU961763|pid:none) Zea mays clone 238133 unknown mRNA. 57 6e-10
AK012242_1(AK012242|pid:none) Mus musculus 11 days embryo whole ... 62 6e-10
AY159316_1(AY159316|pid:none) Homo sapiens lung cancer oncogene ... 67 8e-10
BC102286_1(BC102286|pid:none) Bos taurus guanine nucleotide bind... 67 8e-10
D29802_1(D29802|pid:none) Mus musculus p205 mRNA for G protein b... 67 8e-10
EU306624_1(EU306624|pid:none) Chlamydomonas reinhardtii strain C... 67 8e-10
AP009552_5491(AP009552|pid:none) Microcystis aeruginosa NIES-843... 67 8e-10
(P63243) RecName: Full=Guanine nucleotide-binding protein subuni... 67 8e-10
EF677877_1(EF677877|pid:none) Picea sitchensis clone WS0277_A02 ... 67 8e-10
AM238664_1098(AM238664|pid:none) Streptomyces ambofaciens ATCC 2... 67 8e-10
DQ353790_1(DQ353790|pid:none) Ictalurus punctatus isolate C82LLH... 65 8e-10
AY342000_1(AY342000|pid:none) Oreochromis mossambicus receptor f... 67 1e-09
AM270189_2(AM270189|pid:none) Aspergillus niger contig An08c0340... 67 1e-09
FM992694_112(FM992694|pid:none) Candida dubliniensis CD36 chromo... 67 1e-09
BT052263_1(BT052263|pid:none) Medicago truncatula clone MTYF9_FA... 66 1e-09
CU633901_36(CU633901|pid:none) Podospora anserina genomic DNA ch... 62 1e-09
(Q8BHD1) RecName: Full=WD repeat-containing protein 51B; &AK045... 60 1e-09
EF070464_1(EF070464|pid:none) Maconellicoccus hirsutus clone WHM... 63 1e-09
BT039976_1(BT039976|pid:none) Zea mays full-length cDNA clone ZM... 66 1e-09
AY694127_4(AY694127|pid:none) Gallus gallus cosmid c12.1 chromos... 66 1e-09
AM270328_15(AM270328|pid:none) Aspergillus niger contig An15c001... 66 1e-09
BT088239_1(BT088239|pid:none) Zea mays full-length cDNA clone ZM... 66 1e-09
AK222488_1(AK222488|pid:none) Homo sapiens mRNA for guanine nucl... 66 1e-09
AP004273_30(AP004273|pid:none) Oryza sativa Japonica Group genom... 66 1e-09
(Q9DAW6) RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp... 66 1e-09
BC075582_1(BC075582|pid:none) Xenopus tropicalis TAF5-like RNA p... 66 1e-09
AC153125_19(AC153125|pid:none) Medicago truncatula clone mth2-74... 66 1e-09
AF268195_1(AF268195|pid:none) Mus musculus strain BALB/c IRA1 mR... 66 2e-09
CP000820_1755(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 66 2e-09
CP000591_80(CP000591|pid:none) Ostreococcus lucimarinus CCE9901 ... 66 2e-09
AF052432_1(AF052432|pid:none) Homo sapiens katanin p80 subunit m... 66 2e-09
FJ195366_9(FJ195366|pid:none) Bos taurus Y-linked ubiquitin-spec... 66 2e-09
AP007164_19(AP007164|pid:none) Aspergillus oryzae RIB40 genomic ... 66 2e-09
AB189027_1(AB189027|pid:none) Plutella xylostella mRNA for recep... 62 2e-09
BX510649_2(BX510649|pid:none) Zebrafish DNA sequence from clone ... 65 2e-09
BC095232_1(BC095232|pid:none) Danio rerio F-box and WD repeat do... 65 2e-09
BC057490_1(BC057490|pid:none) Danio rerio WD repeat domain 3, mR... 65 2e-09
AB209201_1(AB209201|pid:none) Homo sapiens mRNA for WD repeat-co... 65 2e-09
CP000771_798(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 65 2e-09
(Q93847) RecName: Full=Uncharacterized WD repeat-containing prot... 60 3e-09
DQ073455_1(DQ073455|pid:none) Choristoneura fumiferana activated... 62 3e-09
AK030547_1(AK030547|pid:none) Mus musculus adult male pituitary ... 65 3e-09
BC167084_1(BC167084|pid:none) Rattus norvegicus transducin (beta... 65 3e-09
(Q9QXE7) RecName: Full=F-box-like/WD repeat-containing protein T... 65 3e-09
BT011244_1(BT011244|pid:none) Arabidopsis thaliana At5g50230 mRN... 65 3e-09
AL929352_24(AL929352|pid:none) Plasmodium falciparum strain 3D7,... 65 3e-09
AB024031_8(AB024031|pid:none) Arabidopsis thaliana genomic DNA, ... 65 3e-09
BT045440_1(BT045440|pid:none) Salmo salar clone ssal-rgf-521-224... 65 3e-09
BC095217_1(BC095217|pid:none) Danio rerio zgc:110281, mRNA (cDNA... 65 3e-09
CP001291_3285(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 65 3e-09
(Q9BZK7) RecName: Full=F-box-like/WD repeat-containing protein T... 65 4e-09
AK022956_1(AK022956|pid:none) Homo sapiens cDNA FLJ12894 fis, cl... 65 4e-09
AY130393_1(AY130393|pid:none) Myxine glutinosa guanine nucleotid... 65 4e-09
FN392319_832(FN392319|pid:none) Pichia pastoris GS115 chromosome... 64 5e-09
AK031937_1(AK031937|pid:none) Mus musculus adult male medulla ob... 64 5e-09
(Q8BHJ5) RecName: Full=F-box-like/WD repeat-containing protein T... 64 5e-09

>CR860672_1(CR860672|pid:none) Pongo abelii mRNA; cDNA DKFZp459M2115
(from clone DKFZp459M2115).
Length = 627

Score = 144 bits (364), Expect = 3e-33
Identities = 86/274 (31%), Positives = 135/274 (49%)
Frame = +3

Query: 24 KDKDGHSSGITCVTVRGNKLISGSSDSTLRVWDMTTGQCLLILQGHNDGVSCLCXIDDTX 203
K D H ITC+ GN+++SGS D+TL+VW TG+CL L GH GV + D
Sbjct: 297 KGHDDHV--ITCLRFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS-SQMRDNI 353

Query: 204 LAXGSLDHSINLWSIETGQLLHSFTNNTSGISCLXXXXVLWAVL*MFSIXHQESY*QHFM 383
+ GS D ++ +W+ ETG+ +H+ +TS + C+ H
Sbjct: 354 IISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL---------------------HEK 392

Query: 384 PIVXESLQFNGGMVLKVQELLVPLGIIL*EFGIYTLGKTTNLLAGHTFRVRCTQVSGNIL 563
+V S L+V ++ G+ ++L GH VRC Q G +
Sbjct: 393 RVVSGSRD----ATLRVWDI--------------ETGQCLHVLMGHVAAVRCVQYDGRRV 434

Query: 564 ASGSWDTTVKIWDLLTGRCIHTLFGHSFNVWSIQFEGNRLVSAGWDKKVKIWDMTTGKEL 743
SG++D VK+WD T C+HTL GH+ V+S+QF+G +VS D +++WD+ TG +
Sbjct: 435 VSGAYDFMVKVWDPETETCLHTLQGHTNRVYSVQFDGIHVVSGSLDTSIRVWDVETGNCI 494

Query: 744 YSLDGHTESIICIQFKGSKLVSAAKEIIVYDFDS 845
++L GH ++ K + LVS + V +D+
Sbjct: 495 HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDT 528

Score = 124 bits (312), Expect = 3e-27
Identities = 90/292 (30%), Positives = 144/292 (49%), Gaps = 23/292 (7%)
Frame = +3

Query: 36 GHSSGITCVTVRGNKLISGSSDSTLRVWDMTTGQCLLILQGHNDGVSCLCXIDDTXLAXG 215
GH+ G+ +R N +ISGS+D TL+VW+ TG+C+ L GH V C+ + + + G
Sbjct: 339 GHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCM-HLHEKRVVSG 397

Query: 216 SLDHSINLWSIETGQLLHSFTNNTSGISCLXXXX---VLWAVL*MFSIXHQESY*QHFMP 386
S D ++ +W IETGQ LH + + + C+ V A M + E+
Sbjct: 398 SRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPET------E 451

Query: 387 IVXESLQFNGGMVLKVQ--ELLVPLGIIL*EFGIYTL--GKTTNLLAGHTFRVRCTQVSG 554
+LQ + V VQ + V G + ++ + G + L GH ++
Sbjct: 452 TCLHTLQGHTNRVYSVQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD 511

Query: 555 NILASGSWDTTVKIWDLLTGRCIHTLFG---HSFNVWSIQFEGNRLVSAGWDKKVKIWDM 725
NIL SG+ D+TVKIWD TG+C+ TL G H V +QF N ++++ D VK+WD+
Sbjct: 512 NILVSGNADSTVKIWDTKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 571

Query: 726 TTGKELYSL----DGHTESIIC-IQFKGSKLVSAA--------KEIIVYDFD 842
TG+ + +L G + ++ I+ +KLV A +++V DFD
Sbjct: 572 KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 623

Score = 104 bits (260), Expect = 3e-21
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 2/234 (0%)
Frame = +3

Query: 147 ILQGHNDGVSCLCXIDDTXLAXGSLDHSINLWSIETGQLLHSFTNNTSGISCLXXXXVLW 326
+L+GH+D V + GS D+++ +WS TG+ L + +T G+ W
Sbjct: 295 VLKGHDDHVITCLRFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV---------W 345

Query: 327 AVL*MFSIXHQESY*QHFMPIVXESLQFNGGM--VLKVQELLVPLGIIL*EFGIYTLGKT 500
+ + +++ +G LKV G+
Sbjct: 346 SSQ------------------MRDNIIISGSTDRTLKVWNA--------------ETGEC 373

Query: 501 TNLLAGHTFRVRCTQVSGNILASGSWDTTVKIWDLLTGRCIHTLFGHSFNVWSIQFEGNR 680
+ L GHT VRC + + SGS D T+++WD+ TG+C+H L GH V +Q++G R
Sbjct: 374 IHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR 433

Query: 681 LVSAGWDKKVKIWDMTTGKELYSLDGHTESIICIQFKGSKLVSAAKEIIVYDFD 842
+VS +D VK+WD T L++L GHT + +QF G +VS + + + +D
Sbjct: 434 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSVQFDGIHVVSGSLDTSIRVWD 487

Score = 92.4 bits (228), Expect = 2e-17
Identities = 41/117 (35%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
Frame = +3

Query: 495 KTTNLLAGHTFRV-RCTQVSGNILASGSWDTTVKIWDLLTGRCIHTLFGHSFNVWSIQFE 671
K+ +L GH V C + GN + SGS D T+K+W +TG+C+ TL GH+ VWS Q
Sbjct: 291 KSPKVLKGHDDHVITCLRFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR 350

Query: 672 GNRLVSAGWDKKVKIWDMTTGKELYSLDGHTESIICIQFKGSKLVSAAKEIIVYDFD 842
N ++S D+ +K+W+ TG+ +++L GHT ++ C+ ++VS +++ + +D
Sbjct: 351 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 407

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,513,857,463
Number of extensions: 31899765
Number of successful extensions: 113172
Number of sequences better than 10.0: 3941
Number of HSP's gapped: 101187
Number of HSP's successfully gapped: 18936
Length of query: 294
Length of database: 1,040,966,779
Length adjustment: 127
Effective length of query: 167
Effective length of database: 634,022,584
Effective search space: 105881771528
Effective search space used: 105881771528
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.53 alm: 0.44 top: 0.53 tms: 0.00 mit: 0.11 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

52.0 %: cytoplasmic
24.0 %: nuclear
8.0 %: cytoskeletal
4.0 %: mitochondrial
4.0 %: vacuolar
4.0 %: Golgi
4.0 %: vesicles of secretory system

>> prediction for Contig-U09362-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0