Contig-U09253-1
Contig ID Contig-U09253-1
Contig update 2002. 9.13
Contig sequence
>Contig-U09253-1 (Contig-U09253-1Q) /CSM_Contig/Contig-U09253-1Q.Seq.d
GTAGAATAGCCTTTACAGATGATTTACCAGAGAATATTTCTAAATATCTT
AGAAGAACTCCATCAACATCAAATATAACAAGTACACCAATAGTTAGAAA
TGATAAACCACCTTTAACTCGAAATCCATCAGCAACAGGTTCAACAATAA
CACAACATCATTATAAACCACCATTACAAGGTGGAAACACATCATCTGTA
TCATCATCAACAAATGTATTTTCAATAAATAATAATAATAATAGTAACAA
CATTAATAATA----------CCACCACCACCAACTAAAAAGTTGGCTCG
TGCAAAATGGGATTGCGTACCAGAGCAAGAAGGTGACTTAGCATTTGTTG
CTGGTGATATCATTACAATCATTAGTAAAGATGATGATGGTTCAGGTTGG
TGGTTAGGAAGTGTTAATAATGTTGCTGGTATGTTTCCGGGTAATTATTG
TGAGGAAATTTAAAAAAATTCCCTTTTTATATAAAACGAATAATCCAAAA
TTGATTAAATGGAAATTAAAAAATAAAAATAAAATAATATATAATAAAAT
AAAATAAATAAAAAAAAATTAA

Gap gap included
Contig length 562
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 3769547
End point 3770101
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 2
Link to clone list U09253
List of clone(s)

est1=SLJ264F,1,262
est2=SLJ264Z,263,564
Translated Amino Acid sequence
RIAFTDDLPENISKYLRRTPSTSNITSTPIVRNDKPPLTRNPSATGSTITQHHYKPPLQG
GNTSSVSSSTNVFSINNNNNSNNINN---

---PPPPTKKLARAKWDCVPEQEGDLAFVAGDIITIISKDDDGSGWWLGSVNNVAGMFPG
NYCEEI*knslfi*ne*skid*meikk*k*nni**nkinkkkl


Translated Amino Acid sequence (All Frames)
Frame A:
ve*plqmiyqriflnileelhqhqi*qvhq*leminhl*leihqqqvqq*hniiinhhyk
vethhlyhhqqmyfq*iiiiivttlii---

---PPPPTKKLARAKWDCVPEQEGDLAFVAGDIITIISKDDDGSGWWLGSVNNVAGMFPG
NYCEEI*knslfi*ne*skid*meikk*k*nni**nkinkkkl

Frame B:
*nslyr*ftreyf*is*knsinikynkytns*k**ttfnsksisnrfnnnttsl*ttitr
wkhiiciiinkcifnk******qh**---

---hhhqlkswlvqngiayqskkvt*hlllvislqslvkmmmvqvgg*evlimllvcfrv
iivrkfkkipflyktnnpklikwklknknkiiynkik*ikkn*

Frame C:
RIAFTDDLPENISKYLRRTPSTSNITSTPIVRNDKPPLTRNPSATGSTITQHHYKPPLQG
GNTSSVSSSTNVFSINNNNNSNNINN---

---tttn*kvgsckmglrtrarr*lsiccw*yhynh**r**wfrlvvrkc**ccwyvsg*
ll*gnlkkfpfyikriiqn*lngn*kikik*yiik*nk*kki

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U09253-1 (Contig-U09253-1Q)
/CSM_Contig/Contig-U09253-1Q.Seq.d
(572 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U09253-1 (Contig-U09253-1Q) /CSM_Contig/Conti... 442 e-124
Contig-U08836-1 (Contig-U08836-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U04005-1 (Contig-U04005-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U11768-1 (Contig-U11768-1Q) /CSM_Contig/Conti... 36 0.040
Contig-U10975-1 (Contig-U10975-1Q) /CSM_Contig/Conti... 36 0.040
Contig-U10739-1 (Contig-U10739-1Q) /CSM_Contig/Conti... 36 0.040
Contig-U10230-1 (Contig-U10230-1Q) /CSM_Contig/Conti... 36 0.040
Contig-U04147-1 (Contig-U04147-1Q) /CSM_Contig/Conti... 36 0.040
Contig-U13875-1 (Contig-U13875-1Q) /CSM_Contig/Conti... 34 0.16
Contig-U12722-1 (Contig-U12722-1Q) /CSM_Contig/Conti... 34 0.16

>Contig-U09253-1 (Contig-U09253-1Q) /CSM_Contig/Contig-U09253-1Q.Seq.d
Length = 572

Score = 442 bits (223), Expect = e-124
Identities = 223/223 (100%)
Strand = Plus / Plus


Query: 1 gtagaatagcctttacagatgatttaccagagaatatttctaaatatcttagaagaactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtagaatagcctttacagatgatttaccagagaatatttctaaatatcttagaagaactc 60


Query: 61 catcaacatcaaatataacaagtacaccaatagttagaaatgataaaccacctttaactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catcaacatcaaatataacaagtacaccaatagttagaaatgataaaccacctttaactc 120


Query: 121 gaaatccatcagcaacaggttcaacaataacacaacatcattataaaccaccattacaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaatccatcagcaacaggttcaacaataacacaacatcattataaaccaccattacaag 180


Query: 181 gtggaaacacatcatctgtatcatcatcaacaaatgtattttc 223
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtggaaacacatcatctgtatcatcatcaacaaatgtattttc 223


Score = 377 bits (190), Expect = e-105
Identities = 190/190 (100%)
Strand = Plus / Plus


Query: 272 ccaccaccaccaactaaaaagttggctcgtgcaaaatgggattgcgtaccagagcaagaa 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ccaccaccaccaactaaaaagttggctcgtgcaaaatgggattgcgtaccagagcaagaa 331


Query: 332 ggtgacttagcatttgttgctggtgatatcattacaatcattagtaaagatgatgatggt 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ggtgacttagcatttgttgctggtgatatcattacaatcattagtaaagatgatgatggt 391


Query: 392 tcaggttggtggttaggaagtgttaataatgttgctggtatgtttccgggtaattattgt 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tcaggttggtggttaggaagtgttaataatgttgctggtatgtttccgggtaattattgt 451


Query: 452 gaggaaattt 461
||||||||||
Sbjct: 452 gaggaaattt 461


>Contig-U08836-1 (Contig-U08836-1Q) /CSM_Contig/Contig-U08836-1Q.Seq.d
Length = 741

Score = 40.1 bits (20), Expect = 0.003
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 350 gctggtgatatcattacaat 369
||||||||||||||||||||
Sbjct: 693 gctggtgatatcattacaat 712


>Contig-U04005-1 (Contig-U04005-1Q) /CSM_Contig/Contig-U04005-1Q.Seq.d
Length = 1296

Score = 40.1 bits (20), Expect = 0.003
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 272 ccaccaccaccaactaaaaa 291
||||||||||||||||||||
Sbjct: 255 ccaccaccaccaactaaaaa 274


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6650
Number of Sequences: 6905
Number of extensions: 6650
Number of successful extensions: 814
Number of sequences better than 10.0: 275
length of query: 572
length of database: 5,674,871
effective HSP length: 16
effective length of query: 556
effective length of database: 5,564,391
effective search space: 3093801396
effective search space used: 3093801396
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2008.11.15
Homology vs DNA
Query= Contig-U09253-1 (Contig-U09253-1Q) /CSM_Contig/Contig-U09253-1Q.Seq.d
(572 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU060332) Dictyostelium discoideum slug cDNA, clone SLJ264. 442 e-120 1
(AU053628) Dictyostelium discoideum slug cDNA, clone SLJ264. 375 1e-99 1
(EH016066) USDA-FP_188604 Lysiphlebus testaceipes adult whol... 48 0.35 1
(AM180355) Clostridium difficile 630 complete genome. 48 0.35 1
(ET183530) PT_7Sa_B01_00005_B24_f Pinus taeda '7-56' single/... 46 1.4 1
(DV457352) CV02024A1G12.f1 CV02-normalized library Manihot e... 46 1.4 1
(AB253768) Gallus gallus Dicer mRNA for Dicer protein, compl... 34 3.2 2
(AC175481) Bos taurus clone CH240-304K11, WORKING DRAFT SEQU... 42 4.8 3
(BX001012) Zebrafish DNA sequence from clone CH211-11C20 in ... 44 5.4 1
(AM906170) Danio rerio mRNA for plakophilin 2 (pkp2 gene). 44 5.4 1
(AC158155) Mus musculus chromosome 3, clone RP23-167L9, comp... 44 5.4 1
(AC124081) Mus musculus chromosome 3, clone RP24-384A12, com... 44 5.4 1
(AM270285) Aspergillus niger contig An12c0290, complete genome. 44 5.4 1
(CS597800) Sequence 24 from Patent EP1792998. 44 5.4 1
(AR810331) Sequence 27 from patent US 7019122. 44 5.4 1
(AR548730) Sequence 3861 from patent US 6747137. 44 5.4 1
(AC106988) Rattus norvegicus clone CH230-228K17, *** SEQUENC... 44 5.4 1
(AC106923) Rattus norvegicus clone CH230-67K19, WORKING DRAF... 44 5.4 1
(AC094167) Rattus norvegicus clone CH230-2F7, *** SEQUENCING... 44 5.4 1
(AC094166) Rattus norvegicus clone CH230-2E9, *** SEQUENCING... 44 5.4 1
(AZ288601) RPCI-23-142F4.TJ RPCI-23 Mus musculus genomic clo... 44 5.4 1
(ER500647) 1093015397909 Global-Ocean-Sampling_GS-35-01-01-1... 44 5.4 1
(EK289146) 1095462324051 Global-Ocean-Sampling_GS-31-01-01-1... 44 5.4 1
(EJ299433) 1095390002082 Global-Ocean-Sampling_GS-27-01-01-1... 44 5.4 1
(EJ065375) 1095458035028 Global-Ocean-Sampling_GS-26-01-01-1... 44 5.4 1
(BX242770) Danio rerio genomic clone DKEY-230J9, genomic sur... 44 5.4 1
(AC211415) Zea mays chromosome 9 clone CH201-345E22; ZMMBBc0... 42 6.3 2
(AE014297) Drosophila melanogaster chromosome 3R, complete s... 32 6.4 2
(AF265664) Solanum tuberosum resistance gene cluster, comple... 40 6.8 2
(AC192175) Zea mays chromosome 9 clone CH201-498I21; ZMMBBc0... 42 7.1 2
(AC009462) Drosophila melanogaster clone BACR27G04, complete... 32 9.8 2

>(AU060332) Dictyostelium discoideum slug cDNA, clone SLJ264.
Length = 262

Score = 442 bits (223), Expect = e-120
Identities = 223/223 (100%)
Strand = Plus / Plus


Query: 1 gtagaatagcctttacagatgatttaccagagaatatttctaaatatcttagaagaactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtagaatagcctttacagatgatttaccagagaatatttctaaatatcttagaagaactc 60


Query: 61 catcaacatcaaatataacaagtacaccaatagttagaaatgataaaccacctttaactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catcaacatcaaatataacaagtacaccaatagttagaaatgataaaccacctttaactc 120


Query: 121 gaaatccatcagcaacaggttcaacaataacacaacatcattataaaccaccattacaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaatccatcagcaacaggttcaacaataacacaacatcattataaaccaccattacaag 180


Query: 181 gtggaaacacatcatctgtatcatcatcaacaaatgtattttc 223
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtggaaacacatcatctgtatcatcatcaacaaatgtattttc 223

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 462,482,009
Number of extensions: 29214645
Number of successful extensions: 2117829
Number of sequences better than 10.0: 32
Length of query: 572
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 549
Effective length of database: 93,106,754,628
Effective search space: 51115608290772
Effective search space used: 51115608290772
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.25
Homology vs Protein
Query= Contig-U09253-1 (Contig-U09253-1Q) /CSM_Contig/Contig-U09253-1Q.Seq.d
(572 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AE017341_341(AE017341|pid:none) Cryptococcus neoformans var. neo... 62 8e-09
CR382139_517(CR382139|pid:none) Debaryomyces hansenii strain CBS... 61 2e-08
FM992693_366(FM992693|pid:none) Candida dubliniensis CD36 chromo... 59 1e-07
CR380955_381(CR380955|pid:none) Candida glabrata strain CBS138 c... 57 3e-07
(A7A261) RecName: Full=LAS seventeen-binding protein 3; ... 57 3e-07
(O74352) RecName: Full=Protein hob1; AltName: Full=Homolog of Bi... 57 3e-07
BC044199_1(BC044199|pid:none) Danio rerio SH3-domain GRB2-like 2... 57 3e-07
L06795_2(L06795|pid:none) Saccharomyces cerevisiae open reading ... 57 5e-07
(P32793) RecName: Full=Protein YSC84; AltName: Full=LAS seventee... 57 5e-07
CR382130_562(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 57 5e-07
BX842681_24(BX842681|pid:none) Neurospora crassa DNA linkage gro... 57 5e-07
CP000496_1039(CP000496|pid:none) Pichia stipitis CBS 6054 chromo... 56 6e-07
(Q6PG29) RecName: Full=Src kinase-associated phosphoprotein 2; A... 56 6e-07
FN392320_120(FN392320|pid:none) Pichia pastoris GS115 chromosome... 56 6e-07
AP007164_582(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 55 1e-06
AC117070_15(AC117070|pid:none) Dictyostelium discoideum chromoso... 55 1e-06
AM270227_6(AM270227|pid:none) Aspergillus niger contig An11c0100... 54 2e-06
CP000496_677(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 54 3e-06
AL596062_4(AL596062|pid:none) Mouse DNA sequence from clone RP23... 54 3e-06
AF077003_1(AF077003|pid:none) Mus musculus SH3 domain-containing... 54 3e-06
AB092812_1(AB092812|pid:none) Rattus norvegicus mRNA for SKAP55 ... 54 4e-06
U52515_1(U52515|pid:none) Caenorhabditis elegans class I unconve... 54 4e-06
AM270199_78(AM270199|pid:none) Aspergillus niger contig An09c010... 54 4e-06
AK299750_1(AK299750|pid:none) Homo sapiens cDNA FLJ52274 complet... 54 4e-06
CU633900_651(CU633900|pid:none) Podospora anserina genomic DNA c... 54 4e-06
AM270339_10(AM270339|pid:none) Aspergillus niger contig An15c012... 53 5e-06
CR382135_646(CR382135|pid:none) Debaryomyces hansenii strain CBS... 53 5e-06
CR382121_351(CR382121|pid:none) Kluyveromyces lactis strain NRRL... 53 5e-06
(Q86WV1) RecName: Full=Src kinase-associated phosphoprotein 1; A... 53 7e-06
BC160597_1(BC160597|pid:none) Xenopus tropicalis hypothetical pr... 53 7e-06
BC047870_1(BC047870|pid:none) Homo sapiens src kinase associated... 53 7e-06
AK290818_1(AK290818|pid:none) Homo sapiens cDNA FLJ76033 complet... 53 7e-06
AY891075_1(AY891075|pid:none) Synthetic construct Homo sapiens c... 53 7e-06
Y11215_1(Y11215|pid:none) Homo sapiens mRNA for SKAP55 protein. 53 7e-06
AY889306_1(AY889306|pid:none) Synthetic construct Homo sapiens c... 52 9e-06
AK299092_1(AK299092|pid:none) Homo sapiens cDNA FLJ51051 complet... 52 9e-06
AK299688_1(AK299688|pid:none) Homo sapiens cDNA FLJ51072 complet... 52 9e-06
EU025708_9(EU025708|pid:none) Salmo salar EAP30 subunit of ELL c... 52 9e-06
CR857714_1(CR857714|pid:none) Pongo abelii mRNA; cDNA DKFZp459H1... 52 9e-06
AK299824_1(AK299824|pid:none) Homo sapiens cDNA FLJ59236 complet... 52 9e-06
X95677_1(X95677|pid:none) H.sapiens mRNA for ArgBPIB protein. 52 9e-06
BC059524_1(BC059524|pid:none) Danio rerio abl-interactor 1, mRNA... 52 9e-06
CU928180_541(CU928180|pid:none) Kluyveromyces thermotolerans str... 52 9e-06
AK302853_1(AK302853|pid:none) Homo sapiens cDNA FLJ51162 complet... 52 9e-06
AK316343_1(AK316343|pid:none) Homo sapiens cDNA, FLJ79242 comple... 52 9e-06
A56561(A56561;S27946) 35K proline-rich protein xlan4 - African c... 52 9e-06
FM992689_442(FM992689|pid:none) Candida dubliniensis CD36 chromo... 52 9e-06
BC072135_1(BC072135|pid:none) Xenopus laevis animal 4, mRNA (cDN... 52 9e-06
BT072142_1(BT072142|pid:none) Salmo salar clone ssal-rgf-513-255... 52 9e-06
EF215154_1(EF215154|pid:none) Callithrix jacchus clone I10-44.3_... 52 9e-06
CU928179_27(CU928179|pid:none) Zygosaccharomyces rouxii strain C... 52 1e-05
AF104246_1(AF104246|pid:none) Gallus gallus enhancer of filament... 52 1e-05
BC093196_1(BC093196|pid:none) Danio rerio zgc:112091, mRNA (cDNA... 52 1e-05
(Q9JLQ0) RecName: Full=CD2-associated protein; AltName: Full=Mes... 52 1e-05
AB040151_1(AB040151|pid:none) Homo sapiens mRNA for hNap1 Bindin... 52 1e-05
FJ380058_1(FJ380058|pid:none) Homo sapiens abl-interactor 1 vari... 52 1e-05
AF540955_1(AF540955|pid:none) Homo sapiens Abl-interactor 1 (SSH... 52 1e-05
U87166_1(U87166|pid:none) Homo sapiens spectrin SH3 domain bindi... 52 1e-05
AL139404_8(AL139404|pid:none) Human DNA sequence from clone RP11... 52 1e-05
AB209268_1(AB209268|pid:none) Homo sapiens mRNA for Abl-interact... 52 1e-05
AB220488_1(AB220488|pid:none) Macaca fascicularis mRNA, clone Qm... 52 1e-05
CU928169_407(CU928169|pid:none) Kluyveromyces thermotolerans str... 52 1e-05
CR382134_370(CR382134|pid:none) Debaryomyces hansenii strain CBS... 52 1e-05
AF006516_1(AF006516|pid:none) Homo sapiens eps8 binding protein ... 52 1e-05
AK126803_1(AK126803|pid:none) Homo sapiens cDNA FLJ44853 fis, cl... 52 1e-05
BC157764_1(BC157764|pid:none) Xenopus tropicalis abl interactor ... 52 1e-05
AL139404_6(AL139404|pid:none) Human DNA sequence from clone RP11... 52 1e-05
BC171128_1(BC171128|pid:none) Xenopus tropicalis abl interactor ... 52 1e-05
AK296751_1(AK296751|pid:none) Homo sapiens cDNA FLJ52931 complet... 52 1e-05
FJ380059_1(FJ380059|pid:none) Homo sapiens abl-interactor 1 vari... 52 1e-05
EF594311_11(EF594311|pid:none) Astatotilapia burtoni clone BAC 1... 51 2e-05
BC084795_1(BC084795|pid:none) Xenopus laevis hypothetical LOC495... 51 2e-05
(O35177) RecName: Full=Enhancer of filamentation 1; Sho... 51 2e-05
AK054179_1(AK054179|pid:none) Mus musculus 2 days pregnant adult... 51 2e-05
U58886_1(U58886|pid:none) Mus musculus endophilin I mRNA, comple... 51 2e-05
BC149241_1(BC149241|pid:none) Bos taurus neural precursor cell e... 51 2e-05
AK030985_1(AK030985|pid:none) Mus musculus adult male thymus cDN... 51 2e-05
(Q14511) RecName: Full=Enhancer of filamentation 1; Sho... 51 2e-05
U94904_1(U94904|pid:none) Rattus norvegicus thyroid hormone resp... 51 2e-05
BC050740_1(BC050740|pid:none) Homo sapiens neural precursor cell... 51 2e-05
AL022098_1(AL022098|pid:none) Human DNA sequence from clone RP3-... 51 2e-05
BC085812_1(BC085812|pid:none) Rattus norvegicus neural precursor... 51 2e-05
AK033729_1(AK033729|pid:none) Mus musculus adult male cecum cDNA... 51 2e-05
BC077276_1(BC077276|pid:none) Xenopus laevis hypothetical protei... 51 2e-05
BC124378_1(BC124378|pid:none) Danio rerio zgc:153534, mRNA (cDNA... 51 2e-05
BC079926_1(BC079926|pid:none) Xenopus tropicalis abl-interactor ... 51 2e-05
AL136139_2(AL136139|pid:none) Human DNA sequence from clone RP4-... 51 2e-05
AF009366_1(AF009366|pid:none) Mus musculus neural precursor cell... 51 2e-05
BT056613_1(BT056613|pid:none) Salmo salar clone ssal-evf-554-235... 51 2e-05
AK292312_1(AK292312|pid:none) Homo sapiens cDNA FLJ78625 complet... 50 3e-05
AK293808_1(AK293808|pid:none) Homo sapiens cDNA FLJ56057 complet... 50 3e-05
BT082694_1(BT082694|pid:none) Anoplopoma fimbria clone afim-evh-... 50 3e-05
(P39743) RecName: Full=Reduced viability upon starvation protein... 50 3e-05
FN314017_1(FN314017|pid:none) Schistosoma japonicum isolate Anhu... 50 3e-05
EF178473_1(EF178473|pid:none) Danio rerio NEDD9 (nedd9) mRNA, co... 50 3e-05
FN357672_2(FN357672|pid:none) Schistosoma mansoni genome sequenc... 50 3e-05
AE014297_4852(AE014297|pid:none) Drosophila melanogaster chromos... 50 3e-05
AK026507_1(AK026507|pid:none) Homo sapiens cDNA: FLJ22854 fis, c... 50 3e-05
AK046357_1(AK046357|pid:none) Mus musculus adult male corpora qu... 50 3e-05
BT009935_1(BT009935|pid:none) Drosophila melanogaster SD08724 fu... 50 3e-05
(Q96HL8) RecName: Full=SH3 domain-containing YSC84-like protein ... 50 3e-05
BC158212_1(BC158212|pid:none) Xenopus laevis hypothetical protei... 50 3e-05
BC124799_1(BC124799|pid:none) Danio rerio zgc:154043, mRNA (cDNA... 50 3e-05
AE014297_4853(AE014297|pid:none) Drosophila melanogaster chromos... 50 3e-05
AE016816_470(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 50 3e-05
AK151363_1(AK151363|pid:none) Mus musculus bone marrow macrophag... 50 4e-05
AF420251_1(AF420251|pid:none) Mus musculus abelson interactor 1 ... 50 4e-05
AK165924_1(AK165924|pid:none) Mus musculus lung RCB-0558 LLC cDN... 50 4e-05
AK167568_1(AK167568|pid:none) Mus musculus 11 days pregnant adul... 50 4e-05
AL845257_3(AL845257|pid:none) Mouse DNA sequence from clone RP23... 50 4e-05
(Q3SZ01) RecName: Full=SH3 domain-containing YSC84-like protein ... 50 4e-05
CR936378_2(CR936378|pid:none) Zebrafish DNA sequence from clone ... 50 4e-05
AL845257_5(AL845257|pid:none) Mouse DNA sequence from clone RP23... 50 4e-05
BC129092_1(BC129092|pid:none) Rattus norvegicus abl-interactor 1... 50 4e-05
AK124815_1(AK124815|pid:none) Homo sapiens cDNA FLJ42825 fis, cl... 50 4e-05
EF586872_1(EF586872|pid:none) Clonorchis sinensis ab1-interactor... 50 4e-05
BC079642_1(BC079642|pid:none) Mus musculus abl-interactor 1, mRN... 50 4e-05
(Q4P5J4) RecName: Full=Class E vacuolar protein-sorting machiner... 50 6e-05
AK315914_1(AK315914|pid:none) Homo sapiens cDNA, FLJ78813 comple... 50 6e-05
BC166180_1(BC166180|pid:none) Xenopus tropicalis hypothetical pr... 50 6e-05
AF304353_1(AF304353|pid:none) Lampetra fluviatilis endophilin SH... 50 6e-05
(Q2US45) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 50 6e-05
AL935282_2(AL935282|pid:none) Zebrafish DNA sequence from clone ... 50 6e-05
AE017356_184(AE017356|pid:none) Cryptococcus neoformans var. neo... 50 6e-05
FN392320_986(FN392320|pid:none) Pichia pastoris GS115 chromosome... 50 6e-05
CR855718_1(CR855718|pid:none) Xenopus tropicalis finished cDNA, ... 50 6e-05
(B0CRJ3) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 49 7e-05
S46992(S46992)protein p130 - rat 49 7e-05
D29766_2(D29766|pid:none) Rattus norvegicus mRNA for Crk-associa... 49 7e-05
U28151_1(U28151|pid:none) Mus musculus Crk-associated substrate ... 49 7e-05
AK145863_1(AK145863|pid:none) Mus musculus 11 days pregnant adul... 49 7e-05
AK167352_1(AK167352|pid:none) Mus musculus 12 days pregnant adul... 49 7e-05
AK167717_1(AK167717|pid:none) Mus musculus 14 days pregnant adul... 49 7e-05
BC081178_1(BC081178|pid:none) Xenopus laevis MGC84356 protein, m... 49 7e-05
AY205155_1(AY205155|pid:none) Rattus norvegicus CD2AP/CMS mRNA, ... 49 7e-05
AK166248_1(AK166248|pid:none) Mus musculus mammary gland RCB-052... 49 7e-05
(O08641) RecName: Full=SH3 domain-containing YSC84-like protein ... 49 9e-05
AK027608_1(AK027608|pid:none) Homo sapiens cDNA FLJ14702 fis, cl... 49 9e-05
BC046842_1(BC046842|pid:none) Xenopus laevis myosin I e, mRNA (c... 49 9e-05
AK295809_1(AK295809|pid:none) Homo sapiens cDNA FLJ55515 complet... 49 9e-05
BC058557_1(BC058557|pid:none) Mus musculus Sh3 domain YSC-like 1... 49 9e-05
(B0BNA1) RecName: Full=SH3 domain-containing YSC84-like protein ... 49 9e-05
AC116330_30(AC116330|pid:none) Dictyostelium discoideum chromoso... 49 9e-05
BC062556_1(BC062556|pid:none) Homo sapiens breast cancer anti-es... 49 9e-05
(Q557J6) RecName: Full=Drebrin-like protein; AltName: Full=Actin... 49 9e-05
AF218451_1(AF218451|pid:none) Homo sapiens Crk-associated substr... 49 9e-05
BC102654_1(BC102654|pid:none) Bos taurus CD2-associated protein,... 49 9e-05
AX399929_1(AX399929|pid:none) Sequence 100 from Patent WO0218424. 49 9e-05
BC089739_1(BC089739|pid:none) Xenopus tropicalis src kinase asso... 49 9e-05
BT046041_1(BT046041|pid:none) Salmo salar clone ssal-rgf-540-039... 49 9e-05
AK139337_1(AK139337|pid:none) Mus musculus 10 days neonate corte... 49 9e-05
AK302617_1(AK302617|pid:none) Homo sapiens cDNA FLJ55908 complet... 49 9e-05
BC110717_1(BC110717|pid:none) Xenopus laevis myosin I e, mRNA (c... 49 9e-05
(Q62420) RecName: Full=Endophilin-A1; AltName: Full=Endophilin-1... 49 9e-05
AY545071_1(AY545071|pid:none) Homo sapiens breast cancer anti-es... 49 9e-05
AB384587_1(AB384587|pid:none) Synthetic construct DNA, clone: pF... 49 1e-04
BC086846_1(BC086846|pid:none) Danio rerio CD2-associated protein... 49 1e-04
AF248540_1(AF248540|pid:none) Homo sapiens intersectin 2 (SH3D1B... 49 1e-04
BC146779_1(BC146779|pid:none) Homo sapiens intersectin 2, mRNA (... 49 1e-04
U61167_1(U61167|pid:none) Human SH3 domain-containing protein SH... 49 1e-04
(A4RF61) RecName: Full=Class E vacuolar protein-sorting machiner... 49 1e-04
CR859070_1(CR859070|pid:none) Pongo abelii mRNA; cDNA DKFZp469E0... 49 1e-04
AF182199_1(AF182199|pid:none) Homo sapiens intersectin 2 short i... 49 1e-04
(Q07883) RecName: Full=Growth factor receptor-bound protein 2; A... 49 1e-04
BC149101_1(BC149101|pid:none) Bos taurus hypothetical LOC504513,... 49 1e-04
CU928176_476(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 49 1e-04
(Q8AXU9) RecName: Full=Endophilin-A3; AltName: Full=Endophilin-3... 49 1e-04
(Q9NZM3) RecName: Full=Intersectin-2; AltName: Full=SH3 domain-c... 49 1e-04
BX511269_1(BX511269|pid:none) Zebrafish DNA sequence from clone ... 49 1e-04
BC082699_1(BC082699|pid:none) Xenopus laevis hypothetical LOC494... 49 1e-04
AB033082_1(AB033082|pid:none) Homo sapiens mRNA for KIAA1256 pro... 49 1e-04
AF001630_1(AF001630|pid:none) Homo sapiens SH3P18-like WASP asso... 49 1e-04
(Q920G0) RecName: Full=Src kinase-associated phosphoprotein 2; A... 49 1e-04
AF085185_1(AF085185|pid:none) Acanthamoeba castellanii Myosin-IA... 49 1e-04
AF114488_1(AF114488|pid:none) Homo sapiens intersectin short iso... 48 2e-04
BC170413_1(BC170413|pid:none) Xenopus laevis intersectin, mRNA (... 48 2e-04
(O42287) RecName: Full=Intersectin-1; &AF032118_1(AF032118|pid:... 48 2e-04
AJ720324_1(AJ720324|pid:none) Gallus gallus mRNA for hypothetica... 48 2e-04
AF064243_1(AF064243|pid:none) Homo sapiens intersectin short for... 48 2e-04
EU120734_1(EU120734|pid:none) Homo sapiens intersectin 1 long fo... 48 2e-04
DQ214657_1(DQ214657|pid:none) Taeniopygia guttata clone 0058P004... 48 2e-04
AK144289_1(AK144289|pid:none) Mus musculus adult male accessory ... 48 2e-04
AM920437_1543(AM920437|pid:none) Penicillium chrysogenum Wiscons... 48 2e-04
EU120733_1(EU120733|pid:none) Homo sapiens intersectin 1 long fo... 48 2e-04
DQ340865_1(DQ340865|pid:none) Homo sapiens intersectin 1 short f... 48 2e-04
AF064244_1(AF064244|pid:none) Homo sapiens intersectin long form... 48 2e-04
AK076000_1(AK076000|pid:none) Mus musculus 10 days embryo whole ... 48 2e-04
(Q15811) RecName: Full=Intersectin-1; AltName: Full=SH3 domain-c... 48 2e-04
AY340592_1(AY340592|pid:none) Homo sapiens intersectin 1 isoform... 48 2e-04
AY810099_1(AY810099|pid:none) Schistosoma japonicum SJCHGC08613 ... 48 2e-04
CU928174_677(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 48 2e-04
AB008159_1(AB008159|pid:none) Rattus norvegicus mRNA for SH3P13S... 48 2e-04
(Q62421) RecName: Full=Endophilin-A3; AltName: Full=Endophilin-3... 48 2e-04
AK299216_1(AK299216|pid:none) Homo sapiens cDNA FLJ51950 complet... 48 2e-04
AB173843_1(AB173843|pid:none) Macaca fascicularis brain cDNA clo... 48 2e-04
(O75563) RecName: Full=Src kinase-associated phosphoprotein 2; A... 48 2e-04
AF053957_1(AF053957|pid:none) Drosophila melanogaster dynamin as... 48 2e-04
AC003999_1(AC003999|pid:none) Homo sapiens PAC clone RP5-1139P1 ... 48 2e-04
BT024977_1(BT024977|pid:none) Drosophila melanogaster IP14822 fu... 48 2e-04
AF009604_1(AF009604|pid:none) Rattus norvegicus SH3p13 mRNA, par... 48 2e-04
(Q5RDS2) RecName: Full=Src kinase-associated phosphoprotein 2; A... 48 2e-04
BC027096_1(BC027096|pid:none) Mus musculus SH3-domain GRB2-like ... 48 2e-04
AL807371_6(AL807371|pid:none) Neurospora crassa DNA linkage grou... 48 2e-04
AK012114_1(AK012114|pid:none) Mus musculus 10 days embryo whole ... 48 2e-04
AE014296_20(AE014296|pid:none) Drosophila melanogaster chromosom... 48 2e-04
BC129161_1(BC129161|pid:none) Danio rerio zgc:158223, mRNA (cDNA... 48 2e-04
(Q8AXV0) RecName: Full=Endophilin-A2; AltName: Full=Endophilin-2... 48 2e-04
AE014134_3450(AE014134|pid:none) Drosophila melanogaster chromos... 48 2e-04
CR626882_3(CR626882|pid:none) Zebrafish DNA sequence from clone ... 48 2e-04
BC109444_1(BC109444|pid:none) Danio rerio zgc:123285, mRNA (cDNA... 48 2e-04
AP007162_207(AP007162|pid:none) Aspergillus oryzae RIB40 genomic... 48 2e-04
BC060334_1(BC060334|pid:none) Xenopus laevis hypothetical protei... 47 3e-04
BC106271_1(BC106271|pid:none) Xenopus laevis hypothetical protei... 47 3e-04
(A2R5J1) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 47 3e-04
(Q99963) RecName: Full=Endophilin-A3; AltName: Full=Endophilin-3... 47 3e-04
BT044544_1(BT044544|pid:none) Drosophila melanogaster IP20241 fu... 47 3e-04
AF036271_1(AF036271|pid:none) Homo sapiens EEN-B2-L3 mRNA, compl... 47 3e-04
AK160794_1(AK160794|pid:none) Mus musculus 14, 17 days embryo he... 47 3e-04
AE014296_19(AE014296|pid:none) Drosophila melanogaster chromosom... 47 3e-04
AF169621_1(AF169621|pid:none) Mus musculus Ese1 protein mRNA, pa... 47 3e-04
BC085549_1(BC085549|pid:none) Danio rerio zgc:103549, mRNA (cDNA... 47 3e-04
DQ656109_1(DQ656109|pid:none) Danio rerio Rho guanine exchange f... 47 3e-04
BC156473_1(BC156473|pid:none) Synthetic construct Mus musculus c... 47 3e-04
AY890715_1(AY890715|pid:none) Synthetic construct Homo sapiens c... 47 3e-04
AF132478_1(AF132478|pid:none) Mus musculus Ese1 protein mRNA, co... 47 3e-04
(Q9Z0R4) RecName: Full=Intersectin-1; AltName: Full=EH and SH3 d... 47 3e-04
BC166334_1(BC166334|pid:none) Xenopus tropicalis breast cancer a... 47 3e-04
(O35179) RecName: Full=Endophilin-A1; AltName: Full=Endophilin-1... 47 3e-04
AE014134_3331(AE014134|pid:none) Drosophila melanogaster chromos... 47 4e-04
BX005416_2(BX005416|pid:none) Zebrafish DNA sequence from clone ... 47 4e-04
BT082080_1(BT082080|pid:none) Drosophila melanogaster GH28580 fu... 47 4e-04
AK293592_1(AK293592|pid:none) Homo sapiens cDNA FLJ54594 complet... 47 4e-04
U67954_1(U67954|pid:none) Caenorhabditis elegans cosmid F41D9, c... 47 4e-04
BT058722_1(BT058722|pid:none) Salmo salar clone ssal-rgf-001-079... 47 4e-04
AJ719327_1(AJ719327|pid:none) Gallus gallus mRNA for hypothetica... 47 4e-04
AL606751_2(AL606751|pid:none) Zebrafish DNA sequence from clone ... 47 4e-04
BC059450_1(BC059450|pid:none) Danio rerio growth factor receptor... 47 4e-04
AK293546_1(AK293546|pid:none) Homo sapiens cDNA FLJ53715 complet... 47 4e-04
AY888447_1(AY888447|pid:none) Synthetic construct Homo sapiens c... 47 4e-04
AJ224676_1(AJ224676|pid:none) Drosophila melanogaster mRNA for r... 47 4e-04
BX005416_1(BX005416|pid:none) Zebrafish DNA sequence from clone ... 47 4e-04
(Q7S6J4) RecName: Full=Class E vacuolar protein-sorting machiner... 47 4e-04
X62852_1(X62852|pid:none) H.sapiens ash mRNA. 47 5e-04
(Q60631) RecName: Full=Growth factor receptor-bound protein 2; A... 47 5e-04
S31926(S31926) myosin IB heavy chain, brush border - chicken &X... 47 5e-04
BC045942_1(BC045942|pid:none) Danio rerio SH3-domain GRB2-like 1... 47 5e-04
U89775_1(U89775|pid:none) Xenopus laevis SH2/SH3 adaptor Grb2 (G... 47 5e-04
L29511_1(L29511|pid:none) Human GRB2 isoform mRNA. 47 5e-04
(P87379) RecName: Full=Growth factor receptor-bound protein 2-A;... 47 5e-04
BC049513_1(BC049513|pid:none) Danio rerio SH3-domain GRB2-like 1... 47 5e-04
CR380955_109(CR380955|pid:none) Candida glabrata strain CBS138 c... 47 5e-04
BC134444_1(BC134444|pid:none) Bos taurus SH3-domain kinase bindi... 46 6e-04
AF426170_1(AF426170|pid:none) Drosophila melanogaster endophilin... 46 6e-04
EU120735_1(EU120735|pid:none) Homo sapiens intersectin 1 short f... 46 6e-04
AF180522_1(AF180522|pid:none) Homo sapiens intersectin short for... 46 6e-04
U61166_1(U61166|pid:none) Human SH3 domain-containing protein SH... 46 6e-04
BC084472_1(BC084472|pid:none) Xenopus tropicalis myosin IF, mRNA... 46 6e-04
CU633895_130(CU633895|pid:none) Podospora anserina genomic DNA c... 46 6e-04
(Q8I1I3) RecName: Full=Endophilin-A; AltName: Full=SH3 domain-co... 46 6e-04
EU140800_1(EU140800|pid:none) Homo sapiens intersectin 1 short f... 46 6e-04
DQ679754_1(DQ679754|pid:none) Homo sapiens intersectin 1 short f... 46 6e-04
AY893005_1(AY893005|pid:none) Synthetic construct Homo sapiens c... 46 8e-04
AX405667_1(AX405667|pid:none) Sequence 82 from Patent WO0222660. 46 8e-04
BC013361_1(BC013361|pid:none) Homo sapiens vav 1 guanine nucleot... 46 8e-04
TVMSVV(A61187;A39576;S36941;S23669)transforming protein vav - mo... 46 8e-04
X98411_1(X98411|pid:none) Homo sapiens partial mRNA for myosin-IF. 46 8e-04
BC086736_1(BC086736|pid:none) Danio rerio Rho guanine nucleotide... 46 8e-04
AF039047_15(AF039047|pid:none) Caenorhabditis elegans cosmid K11... 46 8e-04
BC020487_1(BC020487|pid:none) Mus musculus vav 1 oncogene, mRNA ... 46 8e-04
DQ402497_1(DQ402497|pid:none) Homo sapiens nostrin mRNA, complet... 46 8e-04
(A8N2Y6) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 46 8e-04
BC028071_1(BC028071|pid:none) Homo sapiens myosin IF, mRNA (cDNA... 46 8e-04
AK313307_1(AK313307|pid:none) Homo sapiens cDNA, FLJ93820, highl... 46 8e-04
TVHUVV(B39576;S05382)transforming protein vav - human (fragments) 46 8e-04
(Q5I0D6) RecName: Full=Nostrin; AltName: Full=eNOS trafficking i... 46 8e-04
AK088586_1(AK088586|pid:none) Mus musculus 2 days neonate thymus... 46 8e-04
AK154183_1(AK154183|pid:none) Mus musculus NOD-derived CD11c +ve... 46 8e-04
AF528163_2(AF528163|pid:none) Mus musculus strain 129/Sv chromos... 46 8e-04
BT025352_1(BT025352|pid:none) Bos taurus SH3-domain GRB2-like 1 ... 46 8e-04
BC124443_1(BC124443|pid:none) Danio rerio zgc:153739, mRNA (cDNA... 46 8e-04
AY558108_1(AY558108|pid:none) Saccharomyces cerevisiae clone FLH... 46 8e-04
AK021181_1(AK021181|pid:none) Mus musculus ES cells cDNA, RIKEN ... 46 8e-04
(P15498) RecName: Full=Proto-oncogene vav; &AF030227_1(AF030227... 46 8e-04
CR759992_1(CR759992|pid:none) Xenopus tropicalis finished cDNA, ... 46 8e-04
AK093444_1(AK093444|pid:none) Homo sapiens cDNA FLJ36125 fis, cl... 46 8e-04
AK132886_1(AK132886|pid:none) Mus musculus adult male testis cDN... 46 8e-04
AK301128_1(AK301128|pid:none) Homo sapiens cDNA FLJ53479 complet... 46 8e-04
(P70248) RecName: Full=Myosin-If; &A59300(A59300) &X97650_1(X97... 46 8e-04
(Q2KJA1) RecName: Full=Endophilin-A2; AltName: Full=Endophilin-2... 46 8e-04
(P38822) RecName: Full=Protein BZZ1; &S48956(S48956) &U00059_15... 46 8e-04
BC046502_1(BC046502|pid:none) Mus musculus myosin IF, mRNA (cDNA... 46 8e-04
(Q8I1A6) RecName: Full=Endophilin-A; AltName: Full=SH3 domain-co... 46 8e-04
AB290178_1(AB290178|pid:none) Homo sapiens mRNA for MYO1F varian... 46 8e-04
X16316_1(X16316|pid:none) Human mRNA for vav oncogene. 46 8e-04
AB210037_1(AB210037|pid:none) Homo sapiens mRNA for MYO1F varian... 46 8e-04
AK151373_1(AK151373|pid:none) Mus musculus bone marrow macrophag... 46 8e-04
D63476_1(D63476|pid:none) Homo sapiens mRNA for KIAA0142 gene, p... 45 0.001
AX885499_1(AX885499|pid:none) Sequence 1362 from Patent EP1033401. 45 0.001
U97407_8(U97407|pid:none) Caenorhabditis elegans cosmid C34G6, c... 45 0.001
(Q8R551) RecName: Full=SH3 domain-containing kinase-binding prot... 45 0.001
AK051665_1(AK051665|pid:none) Mus musculus 12 days embryo spinal... 45 0.001
AK038540_1(AK038540|pid:none) Mus musculus adult male hypothalam... 45 0.001
(Q8N3M1) RecName: Full=Rho guanine nucleotide exchange factor 7;... 45 0.001
AF472327_2(AF472327|pid:none) Mus musculus Ruk protein (Sh3kbp1)... 45 0.001
DQ894444_1(DQ894444|pid:none) Synthetic construct Homo sapiens c... 45 0.001
(Q96B97) RecName: Full=SH3 domain-containing kinase-binding prot... 45 0.001
(Q54CL3) RecName: Full=Probable peroxisomal membrane protein PEX... 45 0.001
CS300519_1(CS300519|pid:none) Sequence 27 from Patent EP1661986. 45 0.001
AL139086_4(AL139086|pid:none) Human DNA sequence from clone RP11... 45 0.001
AC007292_3(AC007292|pid:none) Homo sapiens chromosome 19, cosmid... 45 0.001
AF051353_1(AF051353|pid:none) Acanthamoeba castellanii myosin IC... 45 0.001
BC129422_1(BC129422|pid:none) Danio rerio cDNA clone MGC:158742 ... 45 0.001
AK122480_1(AK122480|pid:none) Mus musculus premature mRNA for mK... 45 0.001
AL731780_5(AL731780|pid:none) Mouse DNA sequence from clone RP23... 45 0.001
AK300272_1(AK300272|pid:none) Homo sapiens cDNA FLJ56152 complet... 45 0.001
AK151367_1(AK151367|pid:none) Mus musculus bone marrow macrophag... 45 0.001
G87789(G87789)protein C34G6.7 [imported] - Caenorhabditis elegans 45 0.001
BC000089_1(BC000089|pid:none) Homo sapiens SH3-domain GRB2-like ... 45 0.001
(P19706) RecName: Full=Myosin heavy chain IB; AltName: Full=Myos... 45 0.001
AL390754_3(AL390754|pid:none) Human DNA sequence from clone RP11... 45 0.001
MWAXIB(JQ0095;B34448)myosin heavy chain IB - Acanthamoeba castel... 45 0.001
BC091160_1(BC091160|pid:none) Rattus norvegicus vav 1 guanine nu... 45 0.001
(Q99961) RecName: Full=Endophilin-A2; AltName: Full=Endophilin-2... 45 0.001
BC015806_1(BC015806|pid:none) Homo sapiens SH3-domain kinase bin... 45 0.001
AF255888_1(AF255888|pid:none) Rattus norvegicus adapter protein ... 45 0.001
AL834228_1(AL834228|pid:none) Homo sapiens mRNA; cDNA DKFZp761K1... 45 0.001
(Q925Q9) RecName: Full=SH3 domain-containing kinase-binding prot... 45 0.001
(Q7T2V3) RecName: Full=Mitogen-activated protein kinase kinase k... 45 0.001
(P10569) RecName: Full=Myosin IC heavy chain; &J02974_1(J02974|... 45 0.001
AL139086_1(AL139086|pid:none) Human DNA sequence from clone RP11... 45 0.001
AF047487_1(AF047487|pid:none) Homo sapiens Nck-2 (NCK2) mRNA, co... 45 0.001
AL139086_3(AL139086|pid:none) Human DNA sequence from clone RP11... 45 0.001
CR786576_6(CR786576|pid:none) Zebrafish DNA sequence from clone ... 45 0.001
(Q9Z0R6) RecName: Full=Intersectin-2; AltName: Full=SH3 domain-c... 45 0.001
(Q9UUD0) RecName: Full=Uncharacterized protein C19C2.10; &AL109... 45 0.001
AL732325_2(AL732325|pid:none) Human DNA sequence from clone RP11... 45 0.001
BC138262_1(BC138262|pid:none) Mus musculus intersectin 2, mRNA (... 45 0.001
(Q66II3) RecName: Full=Growth factor receptor-bound protein 2; A... 45 0.001
BC074116_1(BC074116|pid:none) Xenopus laevis MGC81789 protein, m... 45 0.001
AF132672_1(AF132672|pid:none) Rattus norvegicus EH-domain/SH3-do... 45 0.001
(Q91X43) RecName: Full=SH3 domain-containing protein 19; AltName... 45 0.001
(Q1E878) RecName: Full=Class E vacuolar protein-sorting machiner... 45 0.001
FJ629586_1(FJ629586|pid:none) Synthetic construct Drosophila mel... 45 0.001
AK297015_1(AK297015|pid:none) Homo sapiens cDNA FLJ58582 complet... 45 0.001
BC073669_1(BC073669|pid:none) Xenopus laevis MGC83025 protein, m... 45 0.001
BC031117_1(BC031117|pid:none) Mus musculus SH3 domain protein D1... 45 0.001
(Q08DN7) RecName: Full=Proto-oncogene vav; &BC123646_1(BC123646... 45 0.001
(Q9WVE9) RecName: Full=Intersectin-1; AltName: Full=EH domain an... 45 0.001
(P70297) RecName: Full=Signal transducing adapter molecule 1; ... 45 0.002
FN392321_1185(FN392321|pid:none) Pichia pastoris GS115 chromosom... 45 0.002
BC051391_1(BC051391|pid:none) Mus musculus myosin IE, mRNA (cDNA... 45 0.002
(Q4WHP5) RecName: Full=Class E vacuolar protein-sorting machiner... 45 0.002
(Q5BBL4) RecName: Full=Class E vacuolar protein-sorting machiner... 45 0.002
(Q8I1C0) RecName: Full=Endophilin-A; AltName: Full=SH3 domain-co... 45 0.002
(Q6WKZ7) RecName: Full=Nostrin; AltName: Full=eNOS trafficking i... 45 0.002
(Q12965) RecName: Full=Myosin-Ie; AltName: Full=Myosin-Ic; &AB2... 45 0.002
AK082606_1(AK082606|pid:none) Mus musculus 0 day neonate cerebel... 45 0.002
BT045166_1(BT045166|pid:none) Salmo salar clone ssal-rgf-513-373... 45 0.002
AF247655_1(AF247655|pid:none) Mus musculus betaPix-c mRNA, compl... 44 0.002
(Q0CJU8) RecName: Full=Class E vacuolar protein-sorting machiner... 44 0.002
U80955_10(U80955|pid:none) Caenorhabditis elegans cosmid T04C9, ... 44 0.002
CR956640_6(CR956640|pid:none) Pig DNA sequence from clone CH242-... 44 0.002
U96634_1(U96634|pid:none) Mus musculus p85SPR mRNA, complete cds. 44 0.002
AF343877_1(AF343877|pid:none) Mus musculus betaPix-d mRNA, compl... 44 0.002
A68194_1(A68194|pid:none) Sequence 1 from Patent WO9749808. 44 0.002
AK129064_1(AK129064|pid:none) Mus musculus mRNA for mKIAA0142 pr... 44 0.002
AL732327_4(AL732327|pid:none) Human DNA sequence from clone RP11... 44 0.002
AF255886_1(AF255886|pid:none) Rattus norvegicus adapter protein ... 44 0.002
BC052863_1(BC052863|pid:none) Mus musculus SH3-domain kinase bin... 44 0.002
AF542051_1(AF542051|pid:none) Homo sapiens CD2 binding protein C... 44 0.002
BC143969_1(BC143969|pid:none) Homo sapiens vav 3 guanine nucleot... 44 0.002
AF472327_4(AF472327|pid:none) Mus musculus Ruk protein (Sh3kbp1)... 44 0.002
(O55043) RecName: Full=Rho guanine nucleotide exchange factor 7;... 44 0.002
AK020782_1(AK020782|pid:none) Mus musculus 0 day neonate thymus ... 44 0.002
JC5583(JC5583)85K SH3 domain-containing proline-rich protein - m... 44 0.002
T27877(T27877)hypothetical protein ZK470.5 - Caenorhabditis eleg... 44 0.002
AK304088_1(AK304088|pid:none) Homo sapiens cDNA FLJ54045 complet... 44 0.002
AF230520_1(AF230520|pid:none) Rattus norvegicus SH3 domain-conta... 44 0.002
AF255887_1(AF255887|pid:none) Rattus norvegicus adapter protein ... 44 0.002
AF118886_1(AF118886|pid:none) Homo sapiens VAV-3 protein beta is... 44 0.002
AY996221_1(AY996221|pid:none) Rattus norvegicus PAK-interacting ... 44 0.002
(Q8I190) RecName: Full=Endophilin-A; AltName: Full=SH3 domain-co... 44 0.002
(Q9ES28) RecName: Full=Rho guanine nucleotide exchange factor 7;... 44 0.002
BX005068_1(BX005068|pid:none) Zebrafish DNA sequence from clone ... 44 0.002
AK300474_1(AK300474|pid:none) Homo sapiens cDNA FLJ54061 complet... 44 0.002
(Q9UKW4) RecName: Full=Guanine nucleotide exchange factor VAV3; ... 44 0.002
AL513206_2(AL513206|pid:none) Human DNA sequence from clone RP11... 44 0.002
AL929452_4(AL929452|pid:none) Mouse DNA sequence from clone RP23... 44 0.002
AK167505_1(AK167505|pid:none) Mus musculus 14 days pregnant adul... 44 0.003
BC166366_1(BC166366|pid:none) Xenopus tropicalis SH3-domain kina... 44 0.003
AK314405_1(AK314405|pid:none) Homo sapiens cDNA, FLJ95184, highl... 44 0.003
(Q99469) RecName: Full=SH3 and cysteine-rich domain-containing p... 44 0.003
AY222991_1(AY222991|pid:none) Schistosoma japonicum clone ZZD105... 44 0.003
BC116109_1(BC116109|pid:none) Bos taurus NCK adaptor protein 1, ... 44 0.003
AK302273_1(AK302273|pid:none) Homo sapiens cDNA FLJ52941 complet... 44 0.003
BC168933_1(BC168933|pid:none) Rattus norvegicus signal transduci... 44 0.003
BC095864_1(BC095864|pid:none) Danio rerio zgc:113078, mRNA (cDNA... 44 0.003
(Q45FX5) RecName: Full=Protein vav-1; &DQ136172_1(DQ136172|pid:... 44 0.003
(O35964) RecName: Full=Endophilin-A2; AltName: Full=Endophilin-2... 44 0.003
(Q7SDM3) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 44 0.003
AK303083_1(AK303083|pid:none) Homo sapiens cDNA FLJ57683 complet... 44 0.003
FN314829_1(FN314829|pid:none) Schistosoma japonicum isolate Anhu... 44 0.003
AK154836_1(AK154836|pid:none) Mus musculus NOD-derived CD11c +ve... 44 0.003
AL645852_1(AL645852|pid:none) Mouse DNA sequence from clone RP23... 44 0.003
U23520_5(U23520|pid:none) Caenorhabditis elegans cosmid C35B8, c... 44 0.003
AF032119_1(AF032119|pid:none) Homo sapiens hCASK (CASK) mRNA, co... 44 0.003
AK299160_1(AK299160|pid:none) Homo sapiens cDNA FLJ60332 complet... 44 0.003
FN357303_47(FN357303|pid:none) Schistosoma mansoni genome sequen... 44 0.003
EF134956_1(EF134956|pid:none) Lampetra fluviatilis intersectin m... 44 0.003
BC030586_1(BC030586|pid:none) Homo sapiens signal transducing ad... 44 0.003
AF329268_1(AF329268|pid:none) Homo sapiens SH3-domain kinase bin... 44 0.004
(A8PWF6) RecName: Full=Myosin-1; AltName: Full=Class I unconvent... 44 0.004
(Q4R729) RecName: Full=SH3 domain-containing protein C1orf113 ho... 44 0.004
D89164_1(D89164|pid:none) Schizosaccharomyces pombe mRNA, partia... 44 0.004
EF043893_1(EF043893|pid:none) Synthetic construct clone ATCC 106... 44 0.004
AK147053_1(AK147053|pid:none) Mus musculus 17 days embryo stomac... 44 0.004
(Q9P7E8) RecName: Full=Protein app1; &AL162631_2(AL162631|pid:n... 44 0.004
U39651_6(U39651|pid:none) Caenorhabditis elegans cosmid ZK470, c... 44 0.004
BX649266_6(BX649266|pid:none) Zebrafish DNA sequence from clone ... 44 0.004
AL671987_2(AL671987|pid:none) Mouse DNA sequence from clone RP23... 44 0.004
CR382130_454(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 44 0.004
CP000496_452(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 44 0.004
FJ200452_1(FJ200452|pid:none) Sus scrofa NCK adaptor protein 1 (... 44 0.004
U53190_1(U53190|pid:none) Drosophila melanogaster Camguk (cmg) m... 44 0.004
T29005(T29005)hypothetical protein ZK328.3 - Caenorhabditis eleg... 44 0.004
AB168387_1(AB168387|pid:none) Macaca fascicularis testis cDNA cl... 43 0.005
AF251442_1(AF251442|pid:none) Homo sapiens mixed lineage kinase ... 43 0.005
EF619489_1(EF619489|pid:none) Cervus elaphus osteoclast stimulat... 43 0.005
BC136098_1(BC136098|pid:none) Xenopus tropicalis hypothetical pr... 43 0.005
BC085613_1(BC085613|pid:none) Homo sapiens SH3 domain containing... 43 0.005
(A0JNJ1) RecName: Full=SH3 and cysteine-rich domain-containing p... 43 0.005
AK092528_1(AK092528|pid:none) Homo sapiens cDNA FLJ35209 fis, cl... 43 0.005
AL133047_1(AL133047|pid:none) Homo sapiens mRNA; cDNA DKFZp434D0... 43 0.005
BX647422_1(BX647422|pid:none) Homo sapiens mRNA; cDNA DKFZp686I0... 43 0.005
CR382126_1017(CR382126|pid:none) Kluyveromyces lactis strain NRR... 43 0.005
AK294476_1(AK294476|pid:none) Homo sapiens cDNA FLJ61692 complet... 43 0.005
BC167009_1(BC167009|pid:none) Rattus norvegicus NCK adaptor prot... 43 0.005
BC054945_1(BC054945|pid:none) Danio rerio LIM and SH3 protein 1,... 43 0.005
AK053155_1(AK053155|pid:none) Mus musculus 0 day neonate lung cD... 43 0.005
(O43125) RecName: Full=Protein csh3; &AB011825_1(AB011825|pid:n... 43 0.005
AK291025_1(AK291025|pid:none) Homo sapiens cDNA FLJ76174 complet... 43 0.005
(Q7TSG5) RecName: Full=SH3 domain-containing protein C1orf113 ho... 43 0.005
EF043786_1(EF043786|pid:none) Synthetic construct clone ATCC 106... 43 0.005
(A6QLK6) RecName: Full=GRB2-related adapter protein; &BC147998_... 43 0.005
BC111407_1(BC111407|pid:none) Homo sapiens mitogen-activated pro... 43 0.005
BC108893_1(BC108893|pid:none) Homo sapiens SH3 domain containing... 43 0.005
BC108890_1(BC108890|pid:none) Homo sapiens SH3 domain containing... 43 0.005
BC162054_1(BC162054|pid:none) Rattus norvegicus similar to CD2-a... 43 0.005
BC066574_1(BC066574|pid:none) Danio rerio LIM and SH3 protein 1,... 43 0.005
AM167903_1(AM167903|pid:none) Suberites domuncula mRNA for osteo... 43 0.005
AK053843_1(AK053843|pid:none) Mus musculus 0 day neonate eyeball... 43 0.005
BC045483_1(BC045483|pid:none) Danio rerio SH3-domain GRB2-like 3... 43 0.005
AF084183_1(AF084183|pid:none) Mus musculus SH2/SH3 adaptor prote... 43 0.005
AB174533_1(AB174533|pid:none) Macaca fascicularis brain cDNA clo... 43 0.007
AK038840_1(AK038840|pid:none) Mus musculus adult male hypothalam... 43 0.007
EF107689_1(EF107689|pid:none) Emericella nidulans AbpA (abpA) ge... 43 0.007
AF262405_1(AF262405|pid:none) Homo sapiens clone phi9 calcium/ca... 43 0.007
(Q3UTH8) RecName: Full=Rho guanine nucleotide exchange factor 9;... 43 0.007
AK303280_1(AK303280|pid:none) Homo sapiens cDNA FLJ52037 complet... 43 0.007
AK303470_1(AK303470|pid:none) Homo sapiens cDNA FLJ52039 complet... 43 0.007
AL671117_3(AL671117|pid:none) Mouse DNA sequence from clone RP23... 43 0.007
BC125934_1(BC125934|pid:none) Danio rerio si:dkey-9a20.6, mRNA (... 43 0.007
AL158144_2(AL158144|pid:none) Human DNA sequence from clone RP3-... 43 0.007
AY891115_1(AY891115|pid:none) Synthetic construct Homo sapiens c... 43 0.007
BC117311_1(BC117311|pid:none) Homo sapiens calcium/calmodulin-de... 43 0.007
(O75791) RecName: Full=GRB2-related adapter protein 2; AltName: ... 43 0.007
AK303332_1(AK303332|pid:none) Homo sapiens cDNA FLJ50399 complet... 43 0.007
AK293237_1(AK293237|pid:none) Homo sapiens cDNA FLJ54612 complet... 43 0.007
AK122280_1(AK122280|pid:none) Mus musculus mRNA for mKIAA0424 pr... 43 0.007
BC145620_1(BC145620|pid:none) Mus musculus calcium/calmodulin-de... 43 0.007
AK136523_1(AK136523|pid:none) Mus musculus adult male cecum cDNA... 43 0.007
AB039327_1(AB039327|pid:none) Homo sapiens CASK mRNA for calcium... 43 0.007
CR942470_1(CR942470|pid:none) Xenopus tropicalis finished cDNA, ... 43 0.007
AL117204_38(AL117204|pid:none) Caenorhabditis elegans YAC Y116A8... 43 0.007
AF262404_1(AF262404|pid:none) Homo sapiens clone phi7 calcium/ca... 43 0.007
AK303512_1(AK303512|pid:none) Homo sapiens cDNA FLJ50433 complet... 43 0.007
BC141292_1(BC141292|pid:none) Mus musculus calcium/calmodulin-de... 43 0.007
AL158144_3(AL158144|pid:none) Human DNA sequence from clone RP3-... 43 0.007
CR541849_1(CR541849|pid:none) Homo sapiens full open reading fra... 43 0.007
T31504(T31504)hypothetical protein Y116A8C.36 - Caenorhabditis e... 43 0.007
AL671117_4(AL671117|pid:none) Mouse DNA sequence from clone RP23... 43 0.007
EF185302_1(EF185302|pid:none) Chaetopterus pergamentaceus phosph... 43 0.007
AF035582_1(AF035582|pid:none) Homo sapiens CASK mRNA, complete c... 43 0.007
AY893977_1(AY893977|pid:none) Synthetic construct Homo sapiens c... 43 0.007
AK289993_1(AK289993|pid:none) Homo sapiens cDNA FLJ76229 complet... 43 0.007
AL445239_1(AL445239|pid:none) Human DNA sequence from clone RP11... 43 0.007
BC140499_1(BC140499|pid:none) Bos taurus calcium/calmodulin-depe... 43 0.007
(Q5VT19) RecName: Full=Peripheral plasma membrane protein CASK; ... 43 0.007
AL671117_8(AL671117|pid:none) Mouse DNA sequence from clone RP23... 43 0.007
BC080430_1(BC080430|pid:none) Xenopus laevis MGC86497 protein, m... 43 0.007
(O70589) RecName: Full=Peripheral plasma membrane protein CASK; ... 43 0.007
AL355142_2(AL355142|pid:none) Human DNA sequence from clone RP11... 43 0.007
(Q62915) RecName: Full=Peripheral plasma membrane protein CASK; ... 43 0.007
AB208859_1(AB208859|pid:none) Homo sapiens mRNA for calcium/calm... 43 0.007
(Q58DL7) RecName: Full=Rho guanine nucleotide exchange factor 9;... 43 0.007
BC148659_1(BC148659|pid:none) Synthetic construct Mus musculus c... 43 0.007
BC109231_1(BC109231|pid:none) Homo sapiens SH3 and cysteine rich... 42 0.009
CR382139_906(CR382139|pid:none) Debaryomyces hansenii strain CBS... 42 0.009
(Q66HA1) RecName: Full=Mitogen-activated protein kinase kinase k... 42 0.009
AF155142_1(AF155142|pid:none) Mus musculus mixed lineage kinase ... 42 0.009

>AE017341_341(AE017341|pid:none) Cryptococcus neoformans var.
neoformans JEC21 chromosome 1, complete sequence.
Length = 433

Score = 62.4 bits (150), Expect = 8e-09
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Frame = +2

Query: 272 PPPPTK--------KLARAKWDCVPEQEGDLAFVAGDIITIISKDDDGSGWWLGSVNNVA 427
PPPP K K A A +D + EGDL+F AGD I I+ + + WW G +N V
Sbjct: 363 PPPPMKPKASYNNVKYATAIFDYEAQAEGDLSFRAGDRIEIVEQTESAEDWWTGRLNGVT 422

Query: 428 GMFPGNYCE 454
G+FPGNY +
Sbjct: 423 GVFPGNYTQ 431

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 652,620,602
Number of extensions: 9768769
Number of successful extensions: 36763
Number of sequences better than 10.0: 1116
Number of HSP's gapped: 36324
Number of HSP's successfully gapped: 1371
Length of query: 190
Length of database: 1,040,966,779
Length adjustment: 121
Effective length of query: 69
Effective length of database: 653,248,294
Effective search space: 45074132286
Effective search space used: 45074132286
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)

PSORT

psg: 0.75 gvh: 0.31 alm: 0.45 top: 0.53 tms: 0.00 mit: 0.27 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: cytoplasmic
36.0 %: nuclear
8.0 %: plasma membrane
4.0 %: cytoskeletal
4.0 %: mitochondrial
4.0 %: peroxisomal

>> prediction for Contig-U09253-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0