| Contig-U09249-1 |
| Contig ID |
Contig-U09249-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
520 |
| Chromosome number (1..6, M) |
4 |
| Chromosome length |
5430582 |
| Start point |
3167098 |
| End point |
3166589 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
1 |
| Number of EST |
2 |
| Link to clone list |
U09249 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.15 |
| Homology vs DNA |
Query= Contig-U09249-1 (Contig-U09249-1Q) /CSM_Contig/Contig-U09249-1Q.Seq.d
(530 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU053565) Dictyostelium discoideum slug cDNA, clone SLJ121. 460 e-125 1
(AU060303) Dictyostelium discoideum slug cDNA, clone SLJ121. 270 e-100 2
(AP008210) Oryza sativa (japonica cultivar-group) genomic DN... 36 0.037 2
(AL662954) Oryza sativa genomic DNA, chromosome 4, BAC clone... 36 0.050 2
(CR855149) Oryza sativa genomic DNA, chromosome 4, BAC clone... 36 0.052 2
(EI366057) R_529_3' High C+G patch (HCGP) library Oryza sati... 36 0.064 2
(AC087235) Homo sapiens 12 BAC RP11-153K16 (Roswell Park Can... 38 0.22 6
(AM465390) Vitis vinifera contig VV78X107501.4, whole genome... 38 0.27 3
(CV953984) PXrpxc_0341 mycelium, starved in water Phytophtho... 48 0.32 1
(EW777467) cg_F6.38 Pacific oyster hemocyte library Crassost... 48 0.32 1
(AL844509) Plasmodium falciparum chromosome 13. 34 0.58 2
(EK482902) 1095469530044 Global-Ocean-Sampling_GS-32-01-01-1... 36 0.65 2
(AC098923) Rattus norvegicus clone CH230-154B15, WORKING DRA... 32 0.67 2
(AL049183) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 34 0.68 2
(AC154292) Mus musculus BAC clone RP24-488N1 from 16, comple... 46 1.3 1
(AM449905) Vitis vinifera contig VV78X217454.50, whole genom... 46 1.3 1
(AL136223) Human DNA sequence from clone RP1-242G1 on chromo... 46 1.3 1
(AC147807) Mus musculus chromosome 9 clone RP23-114K10 map 9... 46 1.3 1
(AC146787) Aotus nancymaae clone CH258-323A5, WORKING DRAFT ... 46 1.3 1
(EJ284019) 1095368006299 Global-Ocean-Sampling_GS-27-01-01-1... 46 1.3 1
(CR762415) Zebrafish DNA sequence from clone CH211-39K23 in ... 40 1.5 2
(AC129103) Homo sapiens clone CTD-2410H7, *** SEQUENCING IN ... 38 1.6 5
(AM440223) Vitis vinifera, whole genome shotgun sequence, co... 38 2.1 3
(AC215755) Procavia capensis clone CH280-117F15, WORKING DRA... 34 2.5 2
(AP001189) Homo sapiens genomic DNA, chromosome 11 clone:RP1... 32 2.5 2
(AC191380) Zea mays chromosome unknown clone CH201-282J15; Z... 32 2.5 2
(AP000778) Homo sapiens genomic DNA, chromosome 11q14, clone... 32 2.5 2
(CP000040) Bacillus cereus E33L plasmid pE33L466, complete s... 42 3.2 7
(EJ509678) 1095407058511 Global-Ocean-Sampling_GS-28-01-01-1... 34 3.3 2
(CR388028) Zebrafish DNA sequence from clone DKEYP-36B12 in ... 40 3.5 4
(AC091828) Homo sapiens chromosome 5 clone CTD-2019I4, compl... 42 3.8 4
(CR751228) Zebrafish DNA sequence from clone DKEY-168J9 in l... 44 5.0 1
(BX470098) Zebrafish DNA sequence from clone DKEY-148D16 in ... 44 5.0 1
(BX072561) Zebrafish DNA sequence from clone CH211-157C18 in... 44 5.0 1
(AC151309) Xenopus tropicalis clone CH216-97A24, complete se... 44 5.0 1
(AL805966) Mouse DNA sequence from clone RP23-305A10 on chro... 44 5.0 1
(AL445308) Human DNA sequence from clone RP11-486G13 on chro... 44 5.0 1
(AL353596) Human DNA sequence from clone CTA-212D2 on chromo... 44 5.0 1
(AC141347) Rattus norvegicus clone CH230-438G3, WORKING DRAF... 44 5.0 1
(CU638857) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 5.0 1
(CU571204) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 5.0 1
(CU463977) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 5.0 1
(AC230920) Bos taurus clone CH240-495L15, WORKING DRAFT SEQU... 44 5.0 1
(AC221455) Bos taurus clone CH240-410J14, WORKING DRAFT SEQU... 44 5.0 1
(AC206384) Procavia capensis clone CH280-185D20, WORKING DRA... 44 5.0 1
(FH571615) CHO_OF4884xk04f1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 5.0 1
(ET806279) CHO_OF730xb09r1.ab1 CHO_OF Nicotiana tabacum geno... 44 5.0 1
(ET806260) CHO_OF730xb09f1.ab1 CHO_OF Nicotiana tabacum geno... 44 5.0 1
(EK204729) 1095460069701 Global-Ocean-Sampling_GS-31-01-01-1... 44 5.0 1
(EJ380132) 1092963758400 Global-Ocean-Sampling_GS-28-01-01-1... 44 5.0 1
(EJ168148) 1092344073255 Global-Ocean-Sampling_GS-27-01-01-1... 44 5.0 1
(EJ136321) 1092343604361 Global-Ocean-Sampling_GS-27-01-01-1... 44 5.0 1
(CL052559) CH216-76B20_Sp6.1 CH216 Xenopus (Silurana) tropic... 44 5.0 1
(BX236253) Danio rerio genomic clone DKEY-245E4, genomic sur... 44 5.0 1
(BX135174) Danio rerio genomic clone DKEY-80H22, genomic sur... 44 5.0 1
(BX131480) Danio rerio genomic clone DKEY-80H21, genomic sur... 44 5.0 1
(EL844567) CBXT5037.g1 NICHD_XGC_trop_25 Xenopus (Silurana) ... 44 5.0 1
(EL634978) CBTC1611.rev NICHD_XGC_tropBone1 Xenopus (Siluran... 44 5.0 1
(CR413888) Xenopus tropicalis EST, clone TTbA064n08 3'. 44 5.0 1
(CN355771) 17000425234871 GRN_EB Homo sapiens cDNA 5', mRNA ... 44 5.0 1
(AL159173) Human DNA sequence *** SEQUENCING CANCELLED *** f... 40 5.3 2
(EC826289) SME00006403 esmbsro2 Sawyeria marylandensis cDNA,... 38 5.7 2
(AM433877) Vitis vinifera contig VV78X238349.3, whole genome... 38 6.1 2
(AM439842) Vitis vinifera contig VV78X088341.9, whole genome... 38 6.6 2
(FF471634) G613P6075RC9.T0 Acorn worm blastula/gastrula pCMV... 38 6.9 2
(FF471671) G613P6075RG6.T0 Acorn worm blastula/gastrula pCMV... 38 7.1 2
(DC211222) Plasmodium berghei strain ANKA cDNA clone:MG01222... 38 7.3 2
(AM435955) Vitis vinifera contig VV78X224042.16, whole genom... 38 7.5 3
(AM448627) Vitis vinifera contig VV78X229756.12, whole genom... 38 8.1 2
(AC182361) Spermophilus tridecemlineatus clone VMRC20-433G18... 38 8.3 3
(CZ973835) 174262 Tomato MboI BAC Library Solanum lycopersic... 30 8.7 3
(EK502120) 1095505221299 Global-Ocean-Sampling_GS-32-01-01-1... 38 8.9 2
(BX936435) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 32 9.0 2
(CU638849) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 32 9.0 2
>(AU053565) Dictyostelium discoideum slug cDNA, clone SLJ121.
Length = 239
Score = 460 bits (232), Expect = e-125
Identities = 238/238 (100%)
Strand = Plus / Plus
Query: 293 atgatatagactcatcatttgaagatgatattagatcaggatgtaatgaatttggtgaan 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgatatagactcatcatttgaagatgatattagatcaggatgtaatgaatttggtgaan 60
Query: 353 ttgaaaagttagttattaaatctgatagtcaaagtgtaaaagtatatattttatttaaag 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgaaaagttagttattaaatctgatagtcaaagtgtaaaagtatatattttatttaaag 120
Query: 413 atctttattctggcatggcttgtcagtcaaaattaaatggaaaatattttagttatcatt 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atctttattctggcatggcttgtcagtcaaaattaaatggaaaatattttagttatcatt 180
Query: 473 gcattaaagcagaattctatgacgtacacttatttancaaagatgtatttgtgtaaaa 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcattaaagcagaattctatgacgtacacttatttancaaagatgtatttgtgtaaaa 238
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 555,076,747
Number of extensions: 36890947
Number of successful extensions: 3259445
Number of sequences better than 10.0: 74
Length of query: 530
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 507
Effective length of database: 93,106,754,628
Effective search space: 47205124596396
Effective search space used: 47205124596396
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
|
| protein update |
2009. 6.25 |
| Homology vs Protein |
Query= Contig-U09249-1 (Contig-U09249-1Q) /CSM_Contig/Contig-U09249-1Q.Seq.d
(530 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR857371_1(CR857371|pid:none) Pongo abelii mRNA; cDNA DKFZp469F1... 58 2e-07
AK303910_1(AK303910|pid:none) Homo sapiens cDNA FLJ58465 complet... 57 2e-07
CR749443_1(CR749443|pid:none) Homo sapiens mRNA; cDNA DKFZp781C0... 57 2e-07
(Q8VH51) RecName: Full=RNA-binding protein 39; AltName: Full=RNA... 57 2e-07
AK297520_1(AK297520|pid:none) Homo sapiens cDNA FLJ59035 complet... 57 2e-07
BC004000_1(BC004000|pid:none) Mus musculus RNA binding motif pro... 57 2e-07
AK299165_1(AK299165|pid:none) Homo sapiens cDNA FLJ58459 complet... 57 2e-07
BX537770_1(BX537770|pid:none) Homo sapiens mRNA; cDNA DKFZp781I1... 57 2e-07
AK154989_1(AK154989|pid:none) Mus musculus NOD-derived CD11c +ve... 57 2e-07
AK126158_1(AK126158|pid:none) Homo sapiens cDNA FLJ44170 fis, cl... 57 2e-07
AK299678_1(AK299678|pid:none) Homo sapiens cDNA FLJ59214 complet... 57 2e-07
AF087905_1(AF087905|pid:none) Homo sapiens splicing factor SF2 m... 57 3e-07
AK125593_1(AK125593|pid:none) Homo sapiens cDNA FLJ43605 fis, cl... 57 3e-07
AK303668_1(AK303668|pid:none) Homo sapiens cDNA FLJ58561 complet... 57 3e-07
BC044487_1(BC044487|pid:none) Danio rerio RNA binding motif prot... 57 4e-07
BC077813_1(BC077813|pid:none) Xenopus laevis RNA-binding region ... 56 5e-07
BC093451_1(BC093451|pid:none) Xenopus tropicalis RNA binding mot... 56 5e-07
BC075146_1(BC075146|pid:none) Xenopus laevis MGC81970 protein, m... 56 5e-07
CR457257_1(CR457257|pid:none) Homo sapiens full open reading fra... 55 1e-06
BC091794_1(BC091794|pid:none) Danio rerio RNA binding motif prot... 55 1e-06
BT045252_1(BT045252|pid:none) Salmo salar clone ssal-rgf-516-227... 55 1e-06
AE014134_1278(AE014134|pid:none) Drosophila melanogaster chromos... 54 3e-06
AM920431_1448(AM920431|pid:none) Penicillium chrysogenum Wiscons... 54 3e-06
AE014134_1280(AE014134|pid:none) Drosophila melanogaster chromos... 54 3e-06
BC161141_1(BC161141|pid:none) Xenopus tropicalis RNA binding mot... 53 4e-06
BC122593_1(BC122593|pid:none) Bos taurus RNA binding motif prote... 52 9e-06
AP007151_960(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 52 1e-05
CU638744_74(CU638744|pid:none) Podospora anserina genomic DNA ch... 51 2e-05
AF130355_1(AF130355|pid:none) Neurospora crassa Pad-1 (pad-1) ge... 51 2e-05
CR857074_1(CR857074|pid:none) Pongo abelii mRNA; cDNA DKFZp468L0... 50 5e-05
(Q9UHX1) RecName: Full=Poly(U)-binding-splicing factor PUF60; Al... 50 5e-05
BC011265_1(BC011265|pid:none) Homo sapiens poly-U binding splici... 50 5e-05
FN357314_32(FN357314|pid:none) Schistosoma mansoni genome sequen... 50 5e-05
BC009734_1(BC009734|pid:none) Homo sapiens poly-U binding splici... 50 5e-05
BX323559_6(BX323559|pid:none) Zebrafish DNA sequence from clone ... 50 5e-05
AF165892_1(AF165892|pid:none) Rattus norvegicus RNA-binding prot... 50 5e-05
BX323559_10(BX323559|pid:none) Zebrafish DNA sequence from clone... 50 5e-05
BC119437_1(BC119437|pid:none) Mus musculus poly-U binding splici... 50 5e-05
AF217197_1(AF217197|pid:none) Homo sapiens FBP-interacting repre... 50 5e-05
(Q5R469) RecName: Full=Poly(U)-binding-splicing factor PUF60; Al... 50 5e-05
AK151526_1(AK151526|pid:none) Mus musculus bone marrow macrophag... 50 5e-05
(Q2HJG2) RecName: Full=Poly(U)-binding-splicing factor PUF60; Al... 50 5e-05
BX323559_5(BX323559|pid:none) Zebrafish DNA sequence from clone ... 50 5e-05
U51586_1(U51586|pid:none) Human siah binding protein 1 (SiahBP1)... 50 5e-05
AK149632_1(AK149632|pid:none) Mus musculus bone marrow macrophag... 50 5e-05
CR382131_970(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 49 1e-04
FN314363_1(FN314363|pid:none) Schistosoma japonicum isolate Anhu... 48 1e-04
FN314364_1(FN314364|pid:none) Schistosoma japonicum isolate Anhu... 48 1e-04
BC158521_1(BC158521|pid:none) Xenopus tropicalis hypothetical pr... 48 2e-04
AE013599_4123(AE013599|pid:none) Drosophila melanogaster chromos... 48 2e-04
(Q8T6B9) RecName: Full=Poly(U)-binding-splicing factor half pint... 47 4e-04
FN357488_2(FN357488|pid:none) Schistosoma mansoni genome sequenc... 47 4e-04
AF479079_1(AF479079|pid:none) Drosophila melanogaster half pint ... 47 4e-04
AE014296_277(AE014296|pid:none) Drosophila melanogaster chromoso... 47 4e-04
BC071467_1(BC071467|pid:none) Danio rerio poly-U binding splicin... 46 5e-04
AC024791_22(AC024791|pid:none) Caenorhabditis elegans cosmid Y47... 46 5e-04
AL772146_2(AL772146|pid:none) Zebrafish DNA sequence from clone ... 46 5e-04
(Q6IQE0) RecName: Full=Poly(U)-binding-splicing factor PUF60-B; ... 46 5e-04
AC024791_21(AC024791|pid:none) Caenorhabditis elegans cosmid Y47... 46 5e-04
AC005167_12(AC005167|pid:none) Arabidopsis thaliana chromosome 2... 46 7e-04
AY085618_1(AY085618|pid:none) Arabidopsis thaliana clone 16224 m... 46 7e-04
B84546(B84546)probable splicing factor [imported] - Arabidopsis ... 46 7e-04
AY099852_1(AY099852|pid:none) Arabidopsis thaliana putative spli... 46 7e-04
CR848632_1(CR848632|pid:none) Xenopus tropicalis finished cDNA, ... 45 9e-04
AB209211_1(AB209211|pid:none) Homo sapiens premature mRNA for TI... 45 9e-04
(P52912) RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-bind... 45 9e-04
AB220469_1(AB220469|pid:none) Macaca fascicularis mRNA, clone Qf... 45 9e-04
(P31483) RecName: Full=Nucleolysin TIA-1 isoform p40; AltName: F... 45 9e-04
U21320_5(U21320|pid:none) Caenorhabditis elegans cosmid K04G7, c... 45 0.001
AY093121_1(AY093121|pid:none) Arabidopsis thaliana glycine-rich ... 45 0.001
CR380951_76(CR380951|pid:none) Candida glabrata strain CBS138 ch... 45 0.001
AY085469_1(AY085469|pid:none) Arabidopsis thaliana clone 152904 ... 45 0.001
CP001110_1948(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 45 0.001
BT066290_1(BT066290|pid:none) Zea mays full-length cDNA clone ZM... 44 0.002
BT069347_1(BT069347|pid:none) Zea mays full-length cDNA clone ZM... 44 0.002
AJ746579_1(AJ746579|pid:none) Microcebus murinus partial mRNA fo... 44 0.002
BC077169_1(BC077169|pid:none) Xenopus laevis cDNA clone MGC:7876... 44 0.002
AJ717407_1(AJ717407|pid:none) Callithrix jacchus partial mRNA fo... 44 0.002
AM502244_155(AM502244|pid:none) Leishmania infantum chromosome 26. 44 0.002
T15706(T15706) hypothetical protein C30B5.4 - Caenorhabditis ele... 44 0.002
AM494963_155(AM494963|pid:none) Leishmania braziliensis chromoso... 44 0.002
AE014188_165(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 44 0.002
FJ623266_1(FJ623266|pid:none) Bos taurus boule mRNA, complete cds. 44 0.002
CT005265_152(CT005265|pid:none) Leishmania major strain Friedlin... 44 0.002
AJ717408_1(AJ717408|pid:none) Saimiri sciureus partial mRNA for ... 44 0.002
(O94290) RecName: Full=U2 snRNP component ist3; AltName: Full=RN... 44 0.002
T22767(T22767) hypothetical protein F56A8.6 - Caenorhabditis ele... 44 0.003
AB023046_18(AB023046|pid:none) Arabidopsis thaliana genomic DNA,... 44 0.003
AM295005_1(AM295005|pid:none) Homo sapiens mRNA for boll protein. 44 0.003
AJ717405_1(AJ717405|pid:none) Pan paniscus partial mRNA for BOUL... 44 0.003
AK093453_1(AK093453|pid:none) Homo sapiens cDNA FLJ36134 fis, cl... 44 0.003
AB074454_1(AB074454|pid:none) Macaca fascicularis testis cDNA cl... 44 0.003
CP000777_1786(CP000777|pid:none) Leptospira biflexa serovar Pato... 44 0.003
FN357312_50(FN357312|pid:none) Schistosoma mansoni genome sequen... 44 0.003
(Q8N9W6) RecName: Full=Protein boule-like; &AC011997_1(AC011997... 44 0.003
AL928954_3(AL928954|pid:none) Zebrafish DNA sequence from clone ... 43 0.004
(P90727) RecName: Full=Splicing factor U2AF 65 kDa subunit; AltN... 43 0.004
CR926110_1(CR926110|pid:none) Pongo abelii mRNA; cDNA DKFZp459J0... 43 0.004
CP000733_1149(CP000733|pid:none) Coxiella burnetii Dugway 5J108-... 43 0.004
(P90978) RecName: Full=Splicing factor U2AF 65 kDa subunit; AltN... 43 0.004
AE016828_1012(AE016828|pid:none) Coxiella burnetii RSA 493, comp... 43 0.004
AC024875_2(AC024875|pid:none) Caenorhabditis elegans cosmid Y92C... 43 0.004
AM910987_183(AM910987|pid:none) Plasmodium knowlesi strain H chr... 43 0.004
AM270070_3(AM270070|pid:none) Aspergillus niger contig An04c0090... 43 0.004
(A5DW14) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 43 0.004
AB209774_1(AB209774|pid:none) Homo sapiens mRNA for bruno-like 4... 43 0.004
(Q5NVC8) RecName: Full=CUG-BP- and ETR-3-like factor 4; ... 43 0.004
U79145_2(U79145|pid:none) Caenorhabditis briggsae membrane assoc... 43 0.004
AL357374_9(AL357374|pid:none) Human DNA sequence from clone RP11... 43 0.006
AK176834_1(AK176834|pid:none) Arabidopsis thaliana mRNA for puta... 43 0.006
BT053120_1(BT053120|pid:none) Medicago truncatula clone MTYFL_FM... 43 0.006
CP000890_1144(CP000890|pid:none) Coxiella burnetii RSA 331, comp... 43 0.006
AC122728_12(AC122728|pid:none) Medicago truncatula clone mth2-22... 43 0.006
CR380959_163(CR380959|pid:none) Candida glabrata strain CBS138 c... 43 0.006
AL929404_3(AL929404|pid:none) Mouse DNA sequence from clone RP23... 43 0.006
(O13845) RecName: Full=RNA-binding protein rsd1; &CU329670_1673... 43 0.006
BX842649_260(BX842649|pid:none) Bdellovibrio bacteriovorus compl... 43 0.006
AM447494_2(AM447494|pid:none) Vitis vinifera contig VV78X024983.... 43 0.006
AY086452_1(AY086452|pid:none) Arabidopsis thaliana clone 251841 ... 43 0.006
BT053136_1(BT053136|pid:none) Medicago truncatula clone MTYFL_FM... 43 0.006
BT034516_1(BT034516|pid:none) Zea mays full-length cDNA clone ZM... 42 0.007
AE016817_241(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 42 0.007
AE017354_250(AE017354|pid:none) Legionella pneumophila subsp. pn... 42 0.007
AB179321_1(AB179321|pid:none) Macaca fascicularis testis cDNA cl... 42 0.007
CR628336_321(CR628336|pid:none) Legionella pneumophila str. Pari... 42 0.007
CP000675_323(CP000675|pid:none) Legionella pneumophila str. Corb... 42 0.007
(Q499V6) RecName: Full=Zinc finger CCHC-type and RNA-binding mot... 42 0.007
BC010177_1(BC010177|pid:none) Homo sapiens zinc finger CCHC-type... 42 0.007
AF349964_1(AF349964|pid:none) Daucus carota poly(A)-binding prot... 42 0.007
(Q5KBW2) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 42 0.007
(Q8TBF4) RecName: Full=Zinc finger CCHC-type and RNA-binding mot... 42 0.007
BC005099_1(BC005099|pid:none) Homo sapiens zinc finger CCHC-type... 42 0.007
CP000492_2580(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 42 0.009
CP000096_86(CP000096|pid:none) Pelodictyon luteolum DSM 273, com... 42 0.009
CP001099_86(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, c... 42 0.009
AC136449_14(AC136449|pid:none) Medicago truncatula clone mth2-11... 42 0.009
CP000108_1527(CP000108|pid:none) Chlorobium chlorochromatii CaD3... 42 0.009
(Q9ZQA8) RecName: Full=Probable polyadenylate-binding protein At... 42 0.009
FN392319_1136(FN392319|pid:none) Pichia pastoris GS115 chromosom... 42 0.009
(Q5AI15) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 42 0.009
AY360385_9(AY360385|pid:none) Oryza sativa (japonica cultivar-gr... 42 0.009
CP000096_993(CP000096|pid:none) Pelodictyon luteolum DSM 273, co... 42 0.012
BC055501_1(BC055501|pid:none) Danio rerio TIA1 cytotoxic granule... 42 0.012
AL844509_578(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 42 0.012
AM471738_1(AM471738|pid:none) Vitis vinifera contig VV78X179691.... 42 0.012
CP000884_3631(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 42 0.012
CU928175_99(CU928175|pid:none) Zygosaccharomyces rouxii strain C... 42 0.012
A96762(A96762) probable RNA-binding glycine-rich protein T9L24.4... 42 0.012
(P42731) RecName: Full=Polyadenylate-binding protein 2; ... 42 0.012
CP000492_1229(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 42 0.012
AC137820_19(AC137820|pid:none) Medicago truncatula clone mth2-15... 42 0.012
AM445871_1(AM445871|pid:none) Vitis vinifera contig VV78X219207.... 42 0.012
BC146142_1(BC146142|pid:none) Bos taurus bruno-like 4, RNA bindi... 41 0.016
(A4QUF0) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 41 0.016
AK126716_1(AK126716|pid:none) Homo sapiens cDNA FLJ44762 fis, cl... 41 0.016
AF190655_1(AF190655|pid:none) Nicotiana tabacum poly(A)-binding ... 41 0.016
CP001100_1585(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 41 0.016
(Q6CSV3) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 41 0.016
BX538351_112(BX538351|pid:none) Cryptosporidium parvum chromosom... 41 0.016
AP007157_331(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 41 0.016
(Q6DJI9) RecName: Full=Zinc finger CCHC-type and RNA-binding mot... 41 0.016
CP001110_1298(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 41 0.016
CP001032_940(CP001032|pid:none) Opitutus terrae PB90-1, complete... 41 0.016
CP001328_369(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 41 0.016
(P04147) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 41 0.016
(Q4R535) RecName: Full=CUG-BP- and ETR-3-like factor 4; ... 41 0.016
CP001108_121(CP001108|pid:none) Prosthecochloris aestuarii DSM 2... 41 0.016
AK295009_1(AK295009|pid:none) Homo sapiens cDNA FLJ54925 complet... 41 0.016
BC109899_1(BC109899|pid:none) Bos taurus zinc finger CCHC-type a... 41 0.016
AE010300_1919(AE010300|pid:none) Leptospira interrogans serovar ... 41 0.016
(Q2GSX8) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 41 0.016
BT034136_1(BT034136|pid:none) Zea mays full-length cDNA clone ZM... 41 0.016
BC084798_1(BC084798|pid:none) Xenopus laevis hypothetical LOC495... 41 0.016
CU633895_170(CU633895|pid:none) Podospora anserina genomic DNA c... 41 0.016
(Q99383) RecName: Full=Nuclear polyadenylated RNA-binding protei... 41 0.016
AF515450_1(AF515450|pid:none) Mus musculus bruno-like 4 protein ... 41 0.016
AP008216_680(AP008216|pid:none) Oryza sativa (japonica cultivar-... 41 0.021
BT077985_1(BT077985|pid:none) Lepeophtheirus salmonis clone lsal... 41 0.021
BT056632_1(BT056632|pid:none) Salmo salar clone ssal-rgb-544-253... 41 0.021
AB210480_1(AB210480|pid:none) Ciona intestinalis Ci-HTATSF1 mRNA... 41 0.021
AF345796_1(AF345796|pid:none) Heterodera glycines hypothetical p... 41 0.021
CP000890_872(CP000890|pid:none) Coxiella burnetii RSA 331, compl... 41 0.021
AY342388_1(AY342388|pid:none) Caenorhabditis elegans putative RN... 41 0.021
AC137522_17(AC137522|pid:none) Medicago truncatula clone mth2-9h... 40 0.028
(O57437) RecName: Full=Deleted in azoospermia-like-A; S... 40 0.028
AK028340_1(AK028340|pid:none) Mus musculus 12 days embryo embryo... 40 0.028
AM502251_157(AM502251|pid:none) Leishmania infantum chromosome 33. 40 0.028
U58976_1(U58976|pid:none) Drosophila melanogaster ovarian RNA-bi... 40 0.028
U73846_1(U73846|pid:none) Drosophila melanogaster testis-specifi... 40 0.028
CP000838_96(CP000838|pid:none) Acaryochloris marina MBIC11017 pl... 40 0.028
BT052987_1(BT052987|pid:none) Medicago truncatula clone MTYFL_FM... 40 0.028
AM494970_174(AM494970|pid:none) Leishmania braziliensis chromoso... 40 0.028
AE014134_2269(AE014134|pid:none) Drosophila melanogaster chromos... 40 0.028
(Q2UK72) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 40 0.028
AJ299058_1(AJ299058|pid:none) Cicer arietinum partial mRNA for p... 40 0.028
AY398424_1(AY398424|pid:none) Danio rerio clone RK068A2A06 TIA1 ... 40 0.028
AM432259_4(AM432259|pid:none) Vitis vinifera contig VV78X029495.... 40 0.028
AE006470_132(AE006470|pid:none) Chlorobium tepidum TLS, complete... 40 0.028
(A1CRM1) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 40 0.028
FB872092_1(FB872092|pid:none) Sequence 91365 from Patent WO20080... 40 0.028
BX538350_45(BX538350|pid:none) Cryptosporidium parvum chromosome... 40 0.028
A39293(A39293;I56229)cytotoxic granule-associated RNA-binding pr... 40 0.028
BC071023_1(BC071023|pid:none) Xenopus laevis DAZ-like protein, m... 40 0.028
AE014187_93(AE014187|pid:none) Plasmodium falciparum 3D7 chromos... 40 0.028
CU928170_785(CU928170|pid:none) Kluyveromyces thermotolerans str... 40 0.028
CT005270_183(CT005270|pid:none) Leishmania major strain Friedlin... 40 0.028
AE014134_2267(AE014134|pid:none) Drosophila melanogaster chromos... 40 0.028
AM920437_1791(AM920437|pid:none) Penicillium chrysogenum Wiscons... 40 0.028
(Q4V7Y4) RecName: Full=Deleted in azoospermia-like-B; S... 40 0.028
AX969846_1(AX969846|pid:none) Sequence 649 from Patent EP1104808. 40 0.036
BA000045_2326(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 40 0.036
AI2066(AI2066) RNA-binding protein RbpA2 [imported] - Nostoc sp.... 40 0.036
(Q0U1G2) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 40 0.036
CR940353_491(CR940353|pid:none) Theileria annulata strain Ankara... 40 0.036
AM910993_114(AM910993|pid:none) Plasmodium knowlesi strain H chr... 40 0.036
(O23212) RecName: Full=Splicing factor U2af large subunit A; Alt... 40 0.036
CR382123_558(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 40 0.036
(Q10B98) RecName: Full=Zinc finger CCCH domain-containing protei... 40 0.036
CP000828_2532(CP000828|pid:none) Acaryochloris marina MBIC11017,... 40 0.036
(A2Q848) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 40 0.036
EF520345_1(EF520345|pid:none) Gallus gallus CUG-BP and ETR-3-lik... 40 0.036
CP001097_2035(CP001097|pid:none) Chlorobium limicola DSM 245, co... 40 0.036
BA000045_2530(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 40 0.036
AK248132_1(AK248132|pid:none) Dugesia japonica mRNA for hnRNP A2... 40 0.036
AC148486_19(AC148486|pid:none) Medicago truncatula clone mth2-56... 40 0.036
DQ336954_2(DQ336954|pid:none) Glycine max cultivar Williams 82 c... 40 0.036
L20890_1(L20890|pid:none) Anabaena sp. RNA-binding protein gene,... 40 0.036
AE000520_352(AE000520|pid:none) Treponema pallidum subsp. pallid... 40 0.036
BC045711_1(BC045711|pid:none) Homo sapiens bruno-like 4, RNA bin... 40 0.036
AF248650_1(AF248650|pid:none) Homo sapiens RNA-binding protein B... 40 0.036
CU928171_601(CU928171|pid:none) Kluyveromyces thermotolerans str... 40 0.036
(Q05196) RecName: Full=Polyadenylate-binding protein 5; ... 40 0.047
AE017349_319(AE017349|pid:none) Cryptococcus neoformans var. neo... 40 0.047
AK319057_1(AK319057|pid:none) Arabidopsis thaliana AT5G09880 mRN... 40 0.047
AY054603_1(AY054603|pid:none) Arabidopsis thaliana splicing fact... 40 0.047
AK248087_1(AK248087|pid:none) Dugesia japonica mRNA for DAZ-asso... 40 0.047
CP000383_2371(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 40 0.047
AE017356_196(AE017356|pid:none) Cryptococcus neoformans var. neo... 40 0.047
S37085(S37085) polyadenylate-binding protein - fern (Anemia phyl... 40 0.047
BT064279_1(BT064279|pid:none) Zea mays full-length cDNA clone ZM... 40 0.047
BX294151_174(BX294151|pid:none) Rhodopirellula baltica SH 1 comp... 40 0.047
AB016893_8(AB016893|pid:none) Arabidopsis thaliana genomic DNA, ... 40 0.047
(Q1DXH0) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 40 0.047
AM468150_4(AM468150|pid:none) Vitis vinifera contig VV78X086105.... 40 0.047
AB362393_1(AB362393|pid:none) Dugesia japonica Djdmlg mRNA for D... 40 0.047
CP000585_274(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 40 0.047
(A1D4K4) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 40 0.047
FM992688_313(FM992688|pid:none) Candida dubliniensis CD36 chromo... 40 0.047
L20891_1(L20891|pid:none) Chlorogloeopsis sp. RNA-binding protei... 40 0.047
BT011495_1(BT011495|pid:none) Drosophila melanogaster GH12029 fu... 40 0.047
L05109_1(L05109|pid:none) Drosophila melanogaster poly(A)-bindin... 39 0.061
AY633610_1(AY633610|pid:none) Homo sapiens aging-associated gene... 39 0.061
(Q9ZR39) RecName: Full=Splicing factor U2af large subunit A; Alt... 39 0.061
BC097900_1(BC097900|pid:none) Xenopus laevis hypothetical protei... 39 0.061
AJ320241_1(AJ320241|pid:none) Polytomella sp. 'Pringsheim 198.80... 39 0.061
CR954209_116(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 39 0.061
CR382135_622(CR382135|pid:none) Debaryomyces hansenii strain CBS... 39 0.061
EF517793_4(EF517793|pid:none) Petunia integrifolia subsp. inflat... 39 0.061
AM270065_7(AM270065|pid:none) Aspergillus niger contig An04c0040... 39 0.061
AM910995_382(AM910995|pid:none) Plasmodium knowlesi strain H chr... 39 0.061
AK291239_1(AK291239|pid:none) Homo sapiens cDNA FLJ76290 complet... 39 0.061
AM920435_1124(AM920435|pid:none) Penicillium chrysogenum Wiscons... 39 0.061
AY189904_1(AY189904|pid:none) Gallus gallus TIAR mRNA, complete ... 39 0.061
(P21187) RecName: Full=Polyadenylate-binding protein; S... 39 0.061
AC013483_34(AC013483|pid:none) Arabidopsis thaliana chromosome I... 39 0.061
AE017347_305(AE017347|pid:none) Cryptococcus neoformans var. neo... 39 0.061
AY189905_1(AY189905|pid:none) Gallus gallus TIAR (TIAR) gene, ex... 39 0.061
(Q01085) RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-rel... 39 0.061
AK290984_1(AK290984|pid:none) Homo sapiens cDNA FLJ75459 complet... 39 0.061
BT050206_1(BT050206|pid:none) Salmo salar clone ssal-evf-501-088... 39 0.061
S30887(S30887)polyadenylate-binding protein - fruit fly (Drosoph... 39 0.061
EF517794_10(EF517794|pid:none) Solanum bulbocastanum BAC 27I18, ... 39 0.061
CP001037_5335(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 39 0.061
DQ646407_1(DQ646407|pid:none) Bombyx mori poly A binding protein... 39 0.061
EU543263_1(EU543263|pid:none) Solanum melongena U2 snRNP auxilia... 39 0.061
AF273333_11(AF273333|pid:none) Lycopersicon esculentum clone BAC... 39 0.061
CP001108_1196(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 39 0.061
AE017125_319(AE017125|pid:none) Helicobacter hepaticus ATCC 5144... 39 0.061
CR942663_2(CR942663|pid:none) Xenopus tropicalis finished cDNA, ... 39 0.061
FN392319_362(FN392319|pid:none) Pichia pastoris GS115 chromosome... 39 0.061
BC122485_1(BC122485|pid:none) Xenopus laevis hypothetical protei... 39 0.061
U70731_1(U70731|pid:none) Emericella nidulans putative poly(A)-b... 39 0.080
BC048405_1(BC048405|pid:none) Mus musculus bruno-like 4, RNA bin... 39 0.080
FN357445_18(FN357445|pid:none) Schistosoma mansoni genome sequen... 39 0.080
FN357445_17(FN357445|pid:none) Schistosoma mansoni genome sequen... 39 0.080
FN318920_1(FN318920|pid:none) Schistosoma japonicum isolate Anhu... 39 0.080
CU928174_487(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 39 0.080
AY813126_1(AY813126|pid:none) Schistosoma japonicum SJCHGC06087 ... 39 0.080
BT087787_1(BT087787|pid:none) Zea mays full-length cDNA clone ZM... 39 0.080
CR859631_1(CR859631|pid:none) Pongo abelii mRNA; cDNA DKFZp459F0... 39 0.080
FN357392_14(FN357392|pid:none) Schistosoma mansoni genome sequen... 39 0.080
BX842633_11(BX842633|pid:none) Neurospora crassa DNA linkage gro... 39 0.080
AE017282_947(AE017282|pid:none) Methylococcus capsulatus str. Ba... 39 0.080
BT045808_1(BT045808|pid:none) Salmo salar clone ssal-rgf-531-375... 39 0.080
AM746676_2409(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 39 0.080
AC148528_1(AC148528|pid:none) Medicago truncatula clone mth2-53h... 39 0.080
(Q44560) RecName: Full=Putative RNA-binding protein rbpA; &AC18... 39 0.080
AM910993_34(AM910993|pid:none) Plasmodium knowlesi strain H chro... 39 0.080
FN357445_19(FN357445|pid:none) Schistosoma mansoni genome sequen... 39 0.080
CP000499_499(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 39 0.080
CR940353_826(CR940353|pid:none) Theileria annulata strain Ankara... 39 0.080
CP000685_1297(CP000685|pid:none) Flavobacterium johnsoniae UW101... 39 0.10
(Q6P8A7) RecName: Full=RNA-binding protein 24; AltName: Full=RNA... 39 0.10
CP001358_1996(CP001358|pid:none) Desulfovibrio desulfuricans sub... 39 0.10
AC003979_7(AC003979|pid:none) Arabidopsis thaliana chromosome 1 ... 39 0.10
EU711258_1(EU711258|pid:none) Caenorhabditis brenneri clone 4D7.... 39 0.10
AJ719481_1(AJ719481|pid:none) Gallus gallus mRNA for hypothetica... 39 0.10
(Q5ZJX4) RecName: Full=RNA-binding protein 38; AltName: Full=RNA... 39 0.10
(Q6GQD3) RecName: Full=RNA-binding protein 24-A; AltName: Full=R... 39 0.10
BT077518_1(BT077518|pid:none) Lepeophtheirus salmonis clone lsal... 39 0.10
AK248088_1(AK248088|pid:none) Dugesia japonica mRNA for pRM10 pr... 39 0.10
(Q5ZMA3) RecName: Full=RNA-binding protein 24; AltName: Full=RNA... 39 0.10
AJ717349_1(AJ717349|pid:none) Danio rerio mRNA for RNA binding m... 39 0.10
CU633901_171(CU633901|pid:none) Podospora anserina genomic DNA c... 39 0.10
AF293840_1(AF293840|pid:none) Arabidopsis thaliana poly(A) bindi... 39 0.10
AY394938_1(AY394938|pid:none) Danio rerio clone RK045A2G06 RNA b... 39 0.10
CP000462_1744(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 39 0.10
EU730899_5(EU730899|pid:none) Brachypodium distachyon clone BAC ... 39 0.10
T30110(T30110)hypothetical protein F56D1.5 - Caenorhabditis eleg... 39 0.10
U39997_3(U39997|pid:none) Caenorhabditis elegans cosmid F56D1, c... 39 0.10
(P09406) RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa... 39 0.10
(Q6BI95) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 39 0.10
DQ648523_1(DQ648523|pid:none) Bombyx mori splicing factor 45 (RB... 39 0.10
BC108447_1(BC108447|pid:none) Xenopus laevis U1 70K, mRNA (cDNA ... 39 0.10
BC097714_1(BC097714|pid:none) Xenopus laevis U1 70K, mRNA (cDNA ... 39 0.10
BT039327_1(BT039327|pid:none) Zea mays full-length cDNA clone ZM... 38 0.14
(Q96I25) RecName: Full=Splicing factor 45; AltName: Full=45 kDa-... 38 0.14
AB174544_1(AB174544|pid:none) Macaca fascicularis brain cDNA clo... 38 0.14
EU966282_1(EU966282|pid:none) Zea mays clone 293151 THO complex ... 38 0.14
AM494962_8(AM494962|pid:none) Leishmania braziliensis chromosome... 38 0.14
AK067210_1(AK067210|pid:none) Oryza sativa Japonica Group cDNA c... 38 0.14
CP001344_909(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 38 0.14
AC002391_1(AC002391|pid:none) Arabidopsis thaliana chromosome 2 ... 38 0.14
AL021637_13(AL021637|pid:none) Arabidopsis thaliana DNA chromoso... 38 0.14
AB003690_1(AB003690|pid:none) Anabaena variabilis rbpA2 gene for... 38 0.14
(Q76LC6) RecName: Full=RNA-binding protein 24; AltName: Full=RNA... 38 0.14
BC009064_1(BC009064|pid:none) Homo sapiens RNA binding motif pro... 38 0.14
U80455_2(U80455|pid:none) Caenorhabditis elegans cosmid T01D1, c... 38 0.14
BA000022_1019(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 38 0.14
EF523766_1(EF523766|pid:none) Caenorhabditis elegans ELAV-type R... 38 0.14
AL606604_19(AL606604|pid:none) Oryza sativa genomic DNA, chromos... 38 0.14
CP000393_1589(CP000393|pid:none) Trichodesmium erythraeum IMS101... 38 0.14
AF240679_1(AF240679|pid:none) Cucumis sativus poly(A)-binding pr... 38 0.14
CT005264_8(CT005264|pid:none) Leishmania major strain Friedlin, ... 38 0.14
AE017341_447(AE017341|pid:none) Cryptococcus neoformans var. neo... 38 0.14
AK160232_1(AK160232|pid:none) Mus musculus 11 days embryo whole ... 38 0.14
BC151377_1(BC151377|pid:none) Bos taurus RNA binding motif prote... 38 0.14
(Q8JZX4) RecName: Full=Splicing factor 45; AltName: Full=45 kDa-... 38 0.14
CR382131_630(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 38 0.14
BX842646_292(BX842646|pid:none) Bdellovibrio bacteriovorus compl... 38 0.14
BC079248_1(BC079248|pid:none) Rattus norvegicus RNA binding moti... 38 0.14
AB026847_1(AB026847|pid:none) Ciona intestinalis CiGRP1 mRNA for... 38 0.14
CP000361_59(CP000361|pid:none) Arcobacter butzleri RM4018, compl... 38 0.14
EF523768_1(EF523768|pid:none) Caenorhabditis elegans ELAV-type R... 38 0.14
CP000512_4693(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 38 0.14
Z99279_4(Z99279|pid:none) Caenorhabditis elegans YAC Y57G11A, co... 38 0.14
AM920437_1645(AM920437|pid:none) Penicillium chrysogenum Wiscons... 38 0.14
U80455_3(U80455|pid:none) Caenorhabditis elegans cosmid T01D1, c... 38 0.14
DQ440228_1(DQ440228|pid:none) Aedes aegypti clone AET-265 polyad... 38 0.14
(Q44554) RecName: Full=Putative RNA-binding protein rbpB; &AI21... 38 0.14
AJ249323_1(AJ249323|pid:none) Ciona intestinalis mRNA for glycin... 38 0.14
BT054393_1(BT054393|pid:none) Zea mays full-length cDNA clone ZM... 38 0.14
BT063112_1(BT063112|pid:none) Zea mays full-length cDNA clone ZM... 38 0.14
(Q804A9) RecName: Full=Deleted in azoospermia-like; Sho... 38 0.18
AK033183_1(AK033183|pid:none) Mus musculus 15 days embryo male t... 38 0.18
BT076864_1(BT076864|pid:none) Caligus rogercresseyi clone crog-e... 38 0.18
(P0C7P1) RecName: Full=RNA-binding motif protein, Y chromosome, ... 38 0.18
AE017285_2418(AE017285|pid:none) Desulfovibrio vulgaris subsp. v... 38 0.18
(Q64368) RecName: Full=Deleted in azoospermia-like; AltName: Ful... 38 0.18
X99971_1(X99971|pid:none) Macaca fascicularis mRNA for DAZLA pro... 38 0.18
AE014296_2444(AE014296|pid:none) Drosophila melanogaster chromos... 38 0.18
FJ665612_1(FJ665612|pid:none) Trachemys scripta deleted in azoos... 38 0.18
(Q95192) RecName: Full=Deleted in azoospermia-like; AltName: Ful... 38 0.18
CP000348_2308(CP000348|pid:none) Leptospira borgpetersenii serov... 38 0.18
AF053606_1(AF053606|pid:none) Pan troglodytes DAZL1 protein (DAZ... 38 0.18
AB236895_1(AB236895|pid:none) Caenorhabditis briggsae Cb-daz-1 m... 38 0.18
AE014134_2272(AE014134|pid:none) Drosophila melanogaster chromos... 38 0.18
BC167878_1(BC167878|pid:none) Xenopus tropicalis cDNA clone MGC:... 38 0.18
(P53883) RecName: Full=Nucleolar protein 13; &S63130(S63130) &Z... 38 0.18
CR954205_515(CR954205|pid:none) Ostreococcus tauri strain OTTH05... 38 0.18
AY785298_1(AY785298|pid:none) Caenorhabditis remanei polyadenyla... 38 0.18
AK160855_1(AK160855|pid:none) Mus musculus adult male brain cDNA... 38 0.18
(Q92904) RecName: Full=Deleted in azoospermia-like; AltName: Ful... 38 0.18
BC070298_1(BC070298|pid:none) Homo sapiens RNA binding motif pro... 38 0.18
U66078_1(U66078|pid:none) Human DAZLA mRNA, complete cds. 38 0.18
AK303026_1(AK303026|pid:none) Homo sapiens cDNA FLJ50315 complet... 38 0.18
(Q15415) RecName: Full=RNA-binding motif protein, Y chromosome, ... 38 0.18
(A6NDE4) RecName: Full=RNA-binding motif protein, Y chromosome, ... 38 0.18
BC099940_1(BC099940|pid:none) Mus musculus deleted in azoospermi... 38 0.18
A44275_1(A44275|pid:none) Sequence 3 from Patent WO9511300. &B4... 38 0.18
EF501823_1(EF501823|pid:none) Bos taurus deleted in azoospermia-... 38 0.18
AY679693_1(AY679693|pid:none) Alvinella pompejana U2 small nucle... 38 0.18
AE014134_2273(AE014134|pid:none) Drosophila melanogaster chromos... 38 0.18
BT014844_1(BT014844|pid:none) Arabidopsis thaliana At4g13860 gen... 38 0.18
AJ717411_1(AJ717411|pid:none) Saimiri sciureus partial mRNA for ... 38 0.18
(A6NEQ0) RecName: Full=RNA-binding motif protein, Y chromosome, ... 38 0.18
AE017285_2203(AE017285|pid:none) Desulfovibrio vulgaris subsp. v... 38 0.18
BC144577_1(BC144577|pid:none) Homo sapiens RNA binding motif pro... 38 0.18
S55785(S55785;S68087;T37634;S52318) nucleolar protein gar2 - fis... 38 0.18
BC144422_1(BC144422|pid:none) Homo sapiens cDNA clone MGC:177960... 38 0.18
AY995201_1(AY995201|pid:none) Pan troglodytes RBMY1 mRNA, partia... 38 0.18
AF053608_1(AF053608|pid:none) Macaca mulatta DAZL1 protein (DAZL... 38 0.18
CP000644_1611(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 37 0.23
AJ416631_1(AJ416631|pid:none) Xenopus laevis partial mRNA for TI... 37 0.23
CR860590_1(CR860590|pid:none) Pongo abelii mRNA; cDNA DKFZp459H0... 37 0.23
EU500865_1(EU500865|pid:none) Cucumis sativus clone CS_SBa_173I2... 37 0.23
AP005797_18(AP005797|pid:none) Oryza sativa Japonica Group genom... 37 0.23
AJ717410_1(AJ717410|pid:none) Saguinus oedipus partial mRNA for ... 37 0.23
AC015446_4(AC015446|pid:none) Arabidopsis thaliana chromosome I ... 37 0.23
AK013047_1(AK013047|pid:none) Mus musculus 10, 11 days embryo wh... 37 0.23
BC149345_1(BC149345|pid:none) Bos taurus RNA binding motif prote... 37 0.23
T21095(T21095) hypothetical protein F18H3.3a - Caenorhabditis el... 37 0.23
AF072323_1(AF072323|pid:none) Macaca mulatta clone 2 DAZ protein... 37 0.23
CP001291_1633(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 37 0.23
AC005310_7(AC005310|pid:none) Arabidopsis thaliana chromosome 2 ... 37 0.23
AK074596_1(AK074596|pid:none) Homo sapiens cDNA FLJ90115 fis, cl... 37 0.23
EU959070_1(EU959070|pid:none) Zea mays clone 210066 hypothetical... 37 0.23
AM270267_30(AM270267|pid:none) Aspergillus niger contig An12c011... 37 0.23
AM920430_123(AM920430|pid:none) Penicillium chrysogenum Wisconsi... 37 0.23
(Q9BX46) RecName: Full=RNA-binding protein 24; AltName: Full=RNA... 37 0.23
CP001324_273(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 37 0.23
AC026815_16(AC026815|pid:none) Oryza sativa chromosome 10 BAC OS... 37 0.23
S58472(S58472) lysine-rich surface antigen - Entamoeba histolyti... 37 0.23
AM494955_64(AM494955|pid:none) Leishmania braziliensis chromosom... 37 0.23
FB923566_1(FB923566|pid:none) Sequence 142839 from Patent WO2008... 37 0.23
AP005797_17(AP005797|pid:none) Oryza sativa Japonica Group genom... 37 0.23
BT066750_1(BT066750|pid:none) Zea mays full-length cDNA clone ZM... 37 0.23
EU953346_1(EU953346|pid:none) Zea mays clone 1400990 unknown mRNA. 37 0.23
AM490198_1(AM490198|pid:none) Rana lessonae mRNA for DAZ-like pr... 37 0.23
EF085377_1(EF085377|pid:none) Picea sitchensis clone WS0283_I07 ... 37 0.23
AK095016_1(AK095016|pid:none) Homo sapiens cDNA FLJ37697 fis, cl... 37 0.23
FJ648738_1(FJ648738|pid:none) Macaca mulatta deleted in azoosper... 37 0.23
AK156773_1(AK156773|pid:none) Mus musculus activated spleen cDNA... 37 0.23
(Q9BGN8) RecName: Full=Deleted in azoospermia-like; AltName: Ful... 37 0.23
T21096(T21096) hypothetical protein F18H3.3b - Caenorhabditis el... 37 0.23
(P32588) RecName: Full=Nuclear and cytoplasmic polyadenylated RN... 37 0.23
A36311(A36311) 70K U1 small nuclear ribonucleoprotein - fruit fl... 37 0.30
U28944_7(U28944|pid:none) Caenorhabditis elegans cosmid C18A3, c... 37 0.30
AY223431_1(AY223431|pid:none) Schistosoma japonicum clone ZZZ405... 37 0.30
(Q55FQ0) RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa... 37 0.30
AM502236_59(AM502236|pid:none) Leishmania infantum chromosome 18. 37 0.30
AY809303_1(AY809303|pid:none) Schistosoma japonicum SJCHGC06941 ... 37 0.30
FN357339_19(FN357339|pid:none) Schistosoma mansoni genome sequen... 37 0.30
CU928171_453(CU928171|pid:none) Kluyveromyces thermotolerans str... 37 0.30
(P31209) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 37 0.30
BT035575_1(BT035575|pid:none) Zea mays full-length cDNA clone ZM... 37 0.30
EU966420_1(EU966420|pid:none) Zea mays clone 294374 RNA binding ... 37 0.30
FM178379_2882(FM178379|pid:none) Aliivibrio salmonicida LFI1238 ... 37 0.30
T15542(T15542)hypothetical protein C18A3.5 - Caenorhabditis eleg... 37 0.30
AC002335_10(AC002335|pid:none) Arabidopsis thaliana chromosome 2... 37 0.30
FN357316_40(FN357316|pid:none) Schistosoma mansoni genome sequen... 37 0.30
DQ344977_1(DQ344977|pid:none) Schmidtea mediterranea bruno-like ... 37 0.30
EU965535_1(EU965535|pid:none) Zea mays clone 286727 unknown mRNA. 37 0.30
CT005257_59(CT005257|pid:none) Leishmania major strain Friedlin,... 37 0.30
DQ443414_1(DQ443414|pid:none) Bombyx mori U2 small nuclear ribon... 37 0.30
(Q6CDH3) RecName: Full=Polyadenylate-binding protein, cytoplasmi... 37 0.30
(P17133) RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa... 37 0.30
(Q6DIV4) RecName: Full=RNA-binding protein 38; AltName: Full=RNA... 37 0.30
M64603_1(M64603|pid:none) Schizosaccharomyces pombe poly(A)-bind... 37 0.30
AB062911_1(AB062911|pid:none) Physcomitrella patens PpGRP3 mRNA ... 37 0.30
AC186756_19(AC186756|pid:none) Musa acuminata clone MA4_112I10, ... 37 0.30
BC114276_1(BC114276|pid:none) Danio rerio zgc:136803, mRNA (cDNA... 37 0.30
CP001251_1692(CP001251|pid:none) Dictyoglomus turgidum DSM 6724,... 37 0.30
EU430405_2(EU430405|pid:none) Sus scrofa deleted in azoospermia-... 37 0.30
FN357605_9(FN357605|pid:none) Schistosoma mansoni genome sequenc... 37 0.30
BC096985_1(BC096985|pid:none) Danio rerio RNA binding motif prot... 37 0.30
CP000539_2842(CP000539|pid:none) Acidovorax sp. JS42, complete g... 37 0.30
FN318296_1(FN318296|pid:none) Schistosoma japonicum isolate Anhu... 37 0.30
FN318295_1(FN318295|pid:none) Schistosoma japonicum isolate Anhu... 37 0.30
U28944_4(U28944|pid:none) Caenorhabditis elegans cosmid C18A3, c... 37 0.30
BC106249_1(BC106249|pid:none) Xenopus laevis MGC84102 protein, m... 37 0.30
AK248118_1(AK248118|pid:none) Dugesia japonica mRNA for rnpc2 pr... 37 0.30
CP000828_527(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 37 0.40
CT573072_196(CT573072|pid:none) Kuenenia stuttgartiensis genome ... 37 0.40
AC011560_31(AC011560|pid:none) Arabidopsis thaliana chromosome 3... 37 0.40
AB236896_1(AB236896|pid:none) Caenorhabditis remanei Cr-daz-1 mR... 37 0.40
AJ505583_1(AJ505583|pid:none) Mangifera indica partial mRNA for ... 37 0.40
BT070011_1(BT070011|pid:none) Zea mays full-length cDNA clone ZM... 37 0.40
BT063427_1(BT063427|pid:none) Zea mays full-length cDNA clone ZM... 37 0.40
CP000502_45(CP000502|pid:none) Pichia stipitis CBS 6054 chromoso... 37 0.40
(Q29RT0) RecName: Full=Heterogeneous nuclear ribonucleoprotein G... 37 0.40
CP000838_71(CP000838|pid:none) Acaryochloris marina MBIC11017 pl... 37 0.40
CR382124_564(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 37 0.40
EU963022_1(EU963022|pid:none) Zea mays clone 247507 plastid-spec... 37 0.40
BT066563_1(BT066563|pid:none) Zea mays full-length cDNA clone ZM... 37 0.40
EF676965_1(EF676965|pid:none) Picea sitchensis clone WS02759_B16... 37 0.40
CR382124_335(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 37 0.40
CP001089_341(CP001089|pid:none) Geobacter lovleyi SZ, complete g... 37 0.40
AK061492_1(AK061492|pid:none) Oryza sativa Japonica Group cDNA c... 37 0.40
AK228689_1(AK228689|pid:none) Arabidopsis thaliana mRNA for hypo... 37 0.40
BT060693_1(BT060693|pid:none) Zea mays full-length cDNA clone ZM... 37 0.40
CP000777_2648(CP000777|pid:none) Leptospira biflexa serovar Pato... 37 0.40
(Q6DGV1) RecName: Full=CUG-BP- and ETR-3-like factor 4; ... 37 0.40
CP000142_2666(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 37 0.40
CU928173_93(CU928173|pid:none) Zygosaccharomyces rouxii strain C... 36 0.52
AM486977_3(AM486977|pid:none) Vitis vinifera contig VV78X043978.... 36 0.52
AF533016_1(AF533016|pid:none) Salmo salar hyperosmotic glycine r... 36 0.52
AL032631_3(AL032631|pid:none) Caenorhabditis elegans YAC Y106G6H... 36 0.52
AB164065_1(AB164065|pid:none) Cynops pyrrhogaster Dazl mRNA for ... 36 0.52
BC066454_1(BC066454|pid:none) Danio rerio heterogeneous nuclear ... 36 0.52
>CR857371_1(CR857371|pid:none) Pongo abelii mRNA; cDNA DKFZp469F1621
(from clone DKFZp469F1621).
Length = 423
Score = 57.8 bits (138), Expect = 2e-07
Identities = 28/54 (51%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +1
Query: 124 QSTSQDQSRIYVGSLHFSLTEDVIRATFSVFGNIKSLALGKDA-SGKSKGYAFI 282
Q S R+YVGSLHF++TED++R F FG I ++ L KD+ +G+SKGY FI
Sbjct: 240 QKGSGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFI 293
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 606,001,833
Number of extensions: 8989670
Number of successful extensions: 14949
Number of sequences better than 10.0: 1297
Number of HSP's gapped: 14851
Number of HSP's successfully gapped: 1561
Length of query: 176
Length of database: 1,040,966,779
Length adjustment: 120
Effective length of query: 56
Effective length of database: 656,452,579
Effective search space: 36761344424
Effective search space used: 36761344424
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
1 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |