| Contig-U09041-1 |
| Contig ID |
Contig-U09041-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
gap included |
| Contig length |
1439 |
| Chromosome number (1..6, M) |
2 |
| Chromosome length |
8467578 |
| Start point |
3515944 |
| End point |
3517385 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
1 |
| Number of EST |
2 |
| Link to clone list |
U09041 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.14 |
| Homology vs DNA |
Query= Contig-U09041-1 (Contig-U09041-1Q) /CSM_Contig/Contig-U09041-1Q.Seq.d
(1449 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 1304 0.0 1
(BJ386706) Dictyostelium discoideum cDNA clone:dds10p04, 5' ... 1304 0.0 1
(BJ397925) Dictyostelium discoideum cDNA clone:dds10p04, 3' ... 747 0.0 2
(AF134170) Dictyostelium discoideum retrotransposon TRE3-B, ... 716 0.0 8
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 708 0.0 8
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 708 0.0 8
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 708 0.0 9
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 708 0.0 9
(AF067200) Dictyostelium discoideum clone 9.7 tRNA-Val gene,... 700 0.0 3
(AF067199) Dictyostelium discoideum clone 9.2 tRNA-Val gene,... 700 0.0 2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 700 0.0 8
(AC115607) Dictyostelium discoideum chromosome 2 map 4559693... 684 0.0 8
(Z36534) D.discoideum (Ax3-K) ponA gene. 634 0.0 3
(AF067198) Dictyostelium discoideum clone 9.10 Tdd-3 and RED... 634 0.0 8
(U63599) Dictyostelium discoideum Tdd-4 transposable element... 446 e-120 1
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 335 e-103 2
(AF079445) Dictyostelium discoideum TipC (tipC) gene, comple... 325 3e-84 1
(U63600) Dictyostelium discoideum Tdd-4 transposable element... 228 3e-74 2
(AX344560) Sequence 11 from Patent WO0200932. 36 0.001 18
(AX344565) Sequence 16 from Patent WO0200932. 36 0.002 16
(CZ538900) SRAA-aad22e10.b1 Strongyloides ratti whole genome... 36 0.013 2
(CJ338989) Molgula tectiformis cDNA, embryo just before hatc... 52 0.060 1
(CS468864) Sequence 55 from Patent EP1748080. 40 0.12 15
(CS419341) Sequence 55 from Patent WO2006094836. 40 0.12 15
(DQ832718) Phytophthora ramorum mitochondrion, complete genome. 36 0.12 7
(EU427470) Phytophthora ramorum strain CBS 101553 mitochondr... 36 0.12 7
(AX344558) Sequence 9 from Patent WO0200932. 32 0.15 18
(AX344551) Sequence 2 from Patent WO0200932. 32 0.21 17
(AX458489) Sequence 35 from Patent WO0246454. 42 0.21 4
(CU062520) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.24 1
(CU062404) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.24 1
(AC177310) Strongylocentrotus purpuratus clone R3-46D1, WORK... 50 0.24 1
(AC177235) Strongylocentrotus purpuratus clone R3-40O12, WOR... 50 0.24 1
(CW231381) 104_680_11211086_116_37342_053 Sorghum methylatio... 50 0.24 1
(AG381876) Mus musculus molossinus DNA, clone:MSMg01-192B04.... 50 0.24 1
(AX344564) Sequence 15 from Patent WO0200932. 32 0.25 16
(AX344550) Sequence 1 from Patent WO0200932. 40 0.30 14
(AE014826) Plasmodium falciparum 3D7 chromosome 14 section 1... 38 0.32 12
(ER381114) 1094338742318 Global-Ocean-Sampling_GS-34-01-01-1... 48 0.33 2
(DD010736) Diagnosis of known genetic Parameters within the ... 34 0.40 22
(AX344567) Sequence 18 from Patent WO0200932. 36 0.53 17
(AX344561) Sequence 12 from Patent WO0200932. 36 0.73 13
(AX344574) Sequence 25 from Patent WO0200932. 34 0.73 13
(AC179765) Strongylocentrotus purpuratus clone R3-1016K16, W... 42 0.82 5
(CS468856) Sequence 47 from Patent EP1748080. 30 0.83 10
(CS419333) Sequence 47 from Patent WO2006094836. 30 0.83 10
(AC157984) Medicago truncatula clone mth2-142a1, complete se... 46 0.84 7
(AF310884) Dictyostelium discoideum Rac1B (rac1B) gene, comp... 40 0.91 3
(EK333783) 1095467033401 Global-Ocean-Sampling_GS-31-01-01-1... 34 0.92 3
(AC134919) Homo sapiens BAC clone RP13-485B10 from 4, comple... 48 0.94 1
(AC108518) Homo sapiens BAC clone RP11-699F8 from 4, complet... 48 0.94 1
(AC021216) Homo sapiens BAC clone RP11-497K18 from 4, comple... 48 0.94 1
(AC134990) Homo sapiens chromosome UNK clone CTD-2119L17, WO... 48 0.94 1
(AC134874) Homo sapiens chromosome UNK clone RP13-647B9, WOR... 48 0.94 1
(AC215775) Pongo abelii chromosome UNKNOWN clone CH276-68A24... 48 0.94 1
(AC206066) Pongo abelii chromosome UNKNOWN clone CH276-241B3... 48 0.94 1
(AC174546) Strongylocentrotus purpuratus clone R3-3112O4, WO... 48 0.94 1
(ED491766) MUGQ_CH252P120A15T7_GL469_064 CHORI-252 Vervet Mo... 48 0.94 1
(CR342932) mte1-75L20FM1 BAC end, cultivar Jemalong A17 of M... 48 0.94 1
(FE788226) CCAG15985.g1 CCAG Petrolisthes cinctipes heart, g... 48 0.94 1
(FE771504) CCAG615.b6 CCAG Petrolisthes cinctipes heart, gil... 48 0.94 1
(AC200788) Triticum aestivum clone TAACSPALLhA_0769O12, *** ... 36 0.97 5
(AX346052) Sequence 1123 from Patent WO0200928. 32 0.99 5
(AC109351) Homo sapiens BAC clone RP11-417M17 from 4, comple... 38 1.2 7
(AC180111) Strongylocentrotus purpuratus clone R3-4007H13, W... 44 1.4 5
(ET214205) MUGQ_CH252P416J19T7_CP797_072 CHORI-252 Vervet Mo... 36 1.6 3
(AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s... 36 1.8 2
(AC180920) Strongylocentrotus purpuratus clone R3-3063K5, WO... 44 1.9 4
(AC175970) Strongylocentrotus purpuratus clone R3-3035E4, WO... 34 1.9 2
(AX346384) Sequence 1455 from Patent WO0200928. 30 2.0 7
(CR626928) Bacteroides fragilis NCTC 9343 pBF9343 plasmid. 36 2.1 2
(BD453066) Diagnosis of Diseases Associated with tumor suppr... 36 2.1 8
(AX251545) Sequence 513 from Patent WO0168912. 36 2.1 8
(AX344629) Sequence 54 from Patent WO0200927. 32 2.1 5
(CU062421) M.truncatula DNA sequence from clone MTH2-105J18 ... 46 2.2 5
(AC181748) Strongylocentrotus purpuratus clone R3-1037B3, WO... 44 2.2 4
(DJ061103) Method and nucleic acids for the improved treatme... 30 2.2 7
(DD214735) PROGNOSTIC MARKERS FOR PREDICTION OF TREATMENT RE... 30 2.2 7
(DD214552) PROGNOSTIC MARKERS FOR PREDICTION OF TREATMENT RE... 30 2.2 7
(CS624413) Sequence 964 from Patent WO2006071466. 30 2.2 7
(CS249063) Sequence 155 from Patent WO2005121360. 30 2.2 7
(CS138459) Sequence 155 from Patent EP1561821. 30 2.2 7
(CS125450) Sequence 1136 from Patent WO2005059172. 30 2.2 7
(DD010735) Diagnosis of known genetic Parameters within the ... 36 2.2 17
(DQ445138) Beta vulgaris chromosome 9 clone BAC132 genomic s... 32 2.2 6
(AY160100) Dictyostelium discoideum nucleotide exchange fact... 34 2.3 2
(AF474377) Dictyostelium discoideum Ras GTP exchange factor ... 34 2.3 2
(AX345823) Sequence 894 from Patent WO0200928. 32 2.4 5
(AC073510) Homo sapiens chromosome 8, clone RP11-240O2, comp... 38 2.4 5
(BJ328938) Dictyostelium discoideum cDNA clone:dda30l06, 5' ... 34 2.5 2
(BJ327265) Dictyostelium discoideum cDNA clone:dda19f22, 5' ... 34 2.5 2
(BJ362105) Dictyostelium discoideum cDNA clone:ddc20a07, 5' ... 34 2.5 2
(AU088364) Plasmodium falciparum 3D7 cDNA clone from Sugano ... 36 2.5 2
(AY800272) Campylobacter jejuni strain RM1047 lipooligosacch... 44 2.6 3
(EU404106) Campylobacter jejuni strain RM1553 class H lipool... 44 2.7 3
(CE183588) tigr-gss-dog-17000326826871 Dog Library Canis lup... 40 2.8 2
(CS592332) Sequence 26 from Patent WO2007039128. 30 2.8 7
(BD452983) Diagnosis of Diseases Associated with tumor suppr... 32 2.8 6
(AX251462) Sequence 430 from Patent WO0168912. 32 2.8 6
(CS468878) Sequence 69 from Patent EP1748080. 32 2.9 15
>(AC116984) Dictyostelium discoideum chromosome 2 map 2567470-3108875
strain AX4, complete sequence.
Length = 541399
Score = 1304 bits (658), Expect = 0.0
Identities = 658/658 (100%)
Strand = Plus / Minus
Query: 1 caaacaaactcaacgtgcaaaacaaatactattagaaaaagcagcaaaatttaaacatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230942 caaacaaactcaacgtgcaaaacaaatactattagaaaaagcagcaaaatttaaacatct 230883
Query: 61 tgaaaaacaatgcatcgctgaatacaatattatatgtaacaaaaacaaattacatcaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230882 tgaaaaacaatgcatcgctgaatacaatattatatgtaacaaaaacaaattacatcaaaa 230823
Query: 121 ccacacaaacaaataaaggagaaatacctataagtatctatcagcaatactaaacaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230822 ccacacaaacaaataaaggagaaatacctataagtatctatcagcaatactaaacaaaga 230763
Query: 181 tcaaaagatgcaaaaattaccttctgagaatacttcccttcatcgtcaacatcaaccaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230762 tcaaaagatgcaaaaattaccttctgagaatacttcccttcatcgtcaacatcaaccaaa 230703
Query: 241 ctggtttcgtaccctacagatttatcatagacaacatcatcaacatcaatgaattaatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230702 ctggtttcgtaccctacagatttatcatagacaacatcatcaacatcaatgaattaatca 230643
Query: 301 actacctcaaatctaaaaacctccctggtaacatcacactatttgacttctttaaagcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230642 actacctcaaatctaaaaacctccctggtaacatcacactatttgacttctttaaagcat 230583
Query: 361 ttgattctcacgatagtattaaaagaacattaattcatattggtataccaataaaattaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230582 ttgattctcacgatagtattaaaagaacattaattcatattggtataccaataaaattaa 230523
Query: 421 taaatataatccacaagcttttatctgactcacaagcaaaaatttcaattaatggtaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230522 taaatataatccacaagcttttatctgactcacaagcaaaaatttcaattaatggtaaaa 230463
Query: 481 cgactagaaaattcgatattaaaagttgtgtaaaacaaggtgacccaatctcagccactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230462 cgactagaaaattcgatattaaaagttgtgtaaaacaaggtgacccaatctcagccactt 230403
Query: 541 tatttgtaattgtaattgaaatattagcaagaacaataaatgcagacaatacaataattg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230402 tatttgtaattgtaattgaaatattagcaagaacaataaatgcagacaatacaataattg 230343
Query: 601 gattaccaatttcacccaatccacaaattaaaatcaaatttacccaatttgcagaaga 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230342 gattaccaatttcacccaatccacaaattaaaatcaaatttacccaatttgcagaaga 230285
Score = 731 bits (369), Expect(11) = 0.0
Identities = 369/369 (100%)
Strand = Plus / Minus
Query: 1073 gcatttaaaccagatccaactatcaatattaattttcattttgcagaaaacgcacaatat 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228975 gcatttaaaccagatccaactatcaatattaattttcattttgcagaaaacgcacaatat 228916
Query: 1133 aaaaaatacaggttcaactggaattatataaacacaaatcttgatctagtcagaacacat 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228915 aaaaaatacaggttcaactggaattatataaacacaaatcttgatctagtcagaacacat 228856
Query: 1193 gcatattggaacataatctcattagttattcaccaaatatggatatggttatgcaaatca 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228855 gcatattggaacataatctcattagttattcaccaaatatggatatggttatgcaaatca 228796
Query: 1253 ttatttgacatcaatataactcaatcaattgacaattggaacaaccaaataaacaacaca 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228795 ttatttgacatcaatataactcaatcaattgacaattggaacaaccaaataaacaacaca 228736
Query: 1313 acactagattatgatatattaaaatcaaaatggcacaagctaataagattggaatattcc 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228735 acactagattatgatatattaaaatcaaaatggcacaagctaataagattggaatattcc 228676
Query: 1373 agaacattatcaaactttaaccaatactcaattaaaaacaacctcacaaaaactcaaaaa 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228675 agaacattatcaaactttaaccaatactcaattaaaaacaacctcacaaaaactcaaaaa 228616
Query: 1433 gaaacccaa 1441
|||||||||
Sbjct: 228615 gaaacccaa 228607
Score = 559 bits (282), Expect(11) = 0.0
Identities = 282/282 (100%)
Strand = Plus / Minus
Query: 676 aaaagactatataggaaagaaatattcagatctacttcttacttcgcaccaacaatcaat 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229372 aaaagactatataggaaagaaatattcagatctacttcttacttcgcaccaacaatcaat 229313
Query: 736 ataactattatggaaatacacatacgaccaactatttgtcaaaattcaaaaattaaaaga 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229312 ataactattatggaaatacacatacgaccaactatttgtcaaaattcaaaaattaaaaga 229253
Query: 796 tccaaaaggccgtgatacaatgcaaagattccatgctagatgtcttccgattaatcatct 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229252 tccaaaaggccgtgatacaatgcaaagattccatgctagatgtcttccgattaatcatct 229193
Query: 856 acacaacaaagtttgctccatttgcaacaatgaaatgaataatgatccctatggtcattt 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229192 acacaacaaagtttgctccatttgcaacaatgaaatgaataatgatccctatggtcattt 229133
Query: 916 gtttttcaattgtcagcacacaatcaacttcataaaccacga 957
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229132 gtttttcaattgtcagcacacaatcaacttcataaaccacga 229091
Score = 28.2 bits (14), Expect(11) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 625 aaattaaaatcaaa 638
||||||||||||||
Sbjct: 235581 aaattaaaatcaaa 235568
Score = 28.2 bits (14), Expect(11) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 543 tttgtaattgtaat 556
||||||||||||||
Sbjct: 294844 tttgtaattgtaat 294831
Score = 28.2 bits (14), Expect(11) = 0.0
Identities = 14/14 (100%)
Strand = Plus / Minus
Query: 457 caaaaatttcaatt 470
||||||||||||||
Sbjct: 322040 caaaaatttcaatt 322027
Score = 26.3 bits (13), Expect(11) = 0.0
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 554 aattgaaatatta 566
|||||||||||||
Sbjct: 240989 aattgaaatatta 240977
Score = 26.3 bits (13), Expect(11) = 0.0
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 415 aattaataaatat 427
|||||||||||||
Sbjct: 398862 aattaataaatat 398850
Score = 26.3 bits (13), Expect(11) = 0.0
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 405 ataccaataaaat 417
|||||||||||||
Sbjct: 404565 ataccaataaaat 404553
Score = 26.3 bits (13), Expect(11) = 0.0
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 286 tcaatgaattaat 298
|||||||||||||
Sbjct: 432039 tcaatgaattaat 432027
Score = 26.3 bits (13), Expect(11) = 0.0
Identities = 16/17 (94%)
Strand = Plus / Minus
Query: 98 aacaaaaacaaattaca 114
||||||||||| |||||
Sbjct: 484520 aacaaaaacaatttaca 484504
Score = 26.3 bits (13), Expect(11) = 0.0
Identities = 13/13 (100%)
Strand = Plus / Minus
Query: 83 tacaatattatat 95
|||||||||||||
Sbjct: 489786 tacaatattatat 489774
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,771,746,652
Number of extensions: 112575358
Number of successful extensions: 9498368
Number of sequences better than 10.0: 191
Length of query: 1449
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1425
Effective length of database: 97,308,875,965
Effective search space: 138665148250125
Effective search space used: 138665148250125
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.25 |
| Homology vs Protein |
Query= Contig-U09041-1 (Contig-U09041-1Q) /CSM_Contig/Contig-U09041-1Q.Seq.d
(1449 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF134170_2(AF134170|pid:none) Dictyostelium discoideum retrotran... 546 e-154
Z36534_1(Z36534|pid:none) D.discoideum (Ax3-K) ponA gene. 528 e-148
U46204_1(U46204|pid:none) Dictyostelium discoideum tRNA-Ile gene... 183 1e-44
AF298209_2(AF298209|pid:none) Dictyostelium discoideum non-LTR r... 99 4e-19
S20106(S20106;S30209;S30211;S30207;S25646)hypothetical protein 2... 96 4e-18
AF134171_2(AF134171|pid:none) Dictyostelium discoideum retrotran... 95 6e-18
AB097146_1(AB097146|pid:none) Ciona intestinalis retrotransposon... 70 2e-10
AC135560_9(AC135560|pid:none) Oryza sativa chromosome 3 BAC OSJN... 68 9e-10
DQ000238_2(DQ000238|pid:none) Bos taurus insertion sequence L1_B... 65 6e-09
AY539942_1(AY539942|pid:none) Rattus norvegicus LRRGT00191 mRNA,... 64 1e-08
A47757(A47757;D40442)retrovirus-related reverse transcriptase ho... 64 1e-08
EF599954_2(EF599954|pid:none) Sus scrofa retrotransposon L1, com... 64 1e-08
DQ100473_2(DQ100473|pid:none) Rattus norvegicus LINE-1 retrotran... 63 3e-08
AY387074_1(AY387074|pid:none) Rattus norvegicus LRRGT00088 mRNA,... 63 3e-08
AY325175_1(AY325175|pid:none) Rattus norvegicus Ab2-051 mRNA, co... 63 3e-08
AB111947_2(AB111947|pid:none) Takifugu rubripes retrotransposon ... 63 3e-08
AY539902_1(AY539902|pid:none) Rattus norvegicus LRRGT00151 mRNA,... 62 4e-08
S16783(S16783) probable RNA-directed DNA polymerase (EC 2.7.7.49... 62 4e-08
AY383663_1(AY383663|pid:none) Rattus norvegicus LRRGT00008 mRNA,... 62 4e-08
AC079935_18(AC079935|pid:none) Genomic sequence for Oryza sativa... 62 5e-08
AC151673_3(AC151673|pid:none) Medicago truncatula clone mth2-2k1... 62 7e-08
AL606611_5(AL606611|pid:none) Oryza sativa genomic DNA, chromoso... 61 9e-08
AF081106_2(AF081106|pid:none) Mus musculus domesticus L1 retrotr... 61 9e-08
AF081112_2(AF081112|pid:none) Mus musculus domesticus L1 retrotr... 61 9e-08
AF081111_2(AF081111|pid:none) Mus musculus domesticus L1 retrotr... 61 9e-08
AF081110_2(AF081110|pid:none) Mus musculus domesticus L1 retrotr... 61 9e-08
AF016099_3(AF016099|pid:none) Mus musculus glycine receptor beta... 61 9e-08
AF081114_2(AF081114|pid:none) Mus musculus domesticus L1 retrotr... 61 9e-08
AB018705_2(AB018705|pid:none) Mus musculus DNA, L1 element inser... 61 9e-08
AJ319752_2(AJ319752|pid:none) Yarrowia lipolytica non-LTR retrot... 61 1e-07
CR382129_127(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 61 1e-07
AC152176_11(AC152176|pid:none) Medicago truncatula clone mth2-65... 61 1e-07
CR382127_226(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 61 1e-07
AY053456_2(AY053456|pid:none) Mus musculus domesticus retrotrans... 60 2e-07
AY053455_2(AY053455|pid:none) Mus musculus domesticus retrotrans... 60 2e-07
M29324_2(M29324|pid:none) Mus musculus domesticus LINE L1Md-A13,... 60 2e-07
AY539881_1(AY539881|pid:none) Rattus norvegicus LRRG00130 mRNA, ... 60 2e-07
AC148290_1(AC148290|pid:none) Medicago truncatula chromosome 2 c... 60 2e-07
AY539886_1(AY539886|pid:none) Rattus norvegicus LRRG00135 mRNA, ... 60 2e-07
AC133862_2(AC133862|pid:none) Medicago truncatula clone mth2-30d... 60 2e-07
FM992690_109(FM992690|pid:none) Candida dubliniensis CD36 chromo... 60 3e-07
AB008896_2(AB008896|pid:none) Chlorella vulgaris retrotransposon... 59 3e-07
AY387094_1(AY387094|pid:none) Rattus norvegicus LRRGT00108 mRNA,... 59 4e-07
AL662955_4(AL662955|pid:none) Oryza sativa genomic DNA, chromoso... 58 8e-07
AB097122_1(AB097122|pid:none) Ciona intestinalis retrotransposon... 58 1e-06
AF254443_2(AF254443|pid:none) Candida albicans non-LTR retrotran... 58 1e-06
FM992695_349(FM992695|pid:none) Candida dubliniensis CD36 chromo... 58 1e-06
AC108884_10(AC108884|pid:none) Oryza sativa (japonica cultivar-g... 58 1e-06
AC147498_25(AC147498|pid:none) Medicago truncatula clone mth2-6f... 57 1e-06
AC165446_27(AC165446|pid:none) Medicago truncatula clone mth2-61... 57 1e-06
AC152403_26(AC152403|pid:none) Medicago truncatula clone mth2-29... 57 1e-06
B34087(B34087)hypothetical protein (L1H 3' region) - human 57 2e-06
AB012223_1(AB012223|pid:none) Canis lupus familiaris LINE-1 elem... 57 2e-06
AC152405_20(AC152405|pid:none) Medicago truncatula clone mth2-49... 57 2e-06
JU0033(JU0033)hypothetical L1 protein (third intron of gene TS) ... 57 2e-06
AB097143_2(AB097143|pid:none) Danio rerio retrotransposon DewaDr... 57 2e-06
AC146790_5(AC146790|pid:none) Medicago truncatula clone mth2-123... 57 2e-06
AY497885_1(AY497885|pid:none) Rivulus marmoratus isolate Rm_A2_3... 57 2e-06
U93569_2(U93569|pid:none) Human L1 element L1.20 p40 and putativ... 56 3e-06
AC153123_16(AC153123|pid:none) Medicago truncatula clone mte1-72... 56 3e-06
AC135917_4(AC135917|pid:none) Oryza sativa (japonica cultivar-gr... 56 3e-06
U93574_2(U93574|pid:none) Human L1 element L1.39 p40 and putativ... 56 4e-06
DQ456866_2(DQ456866|pid:none) Pan troglodytes clone L1.56 retrot... 56 4e-06
AK097143_1(AK097143|pid:none) Homo sapiens cDNA FLJ39824 fis, cl... 56 4e-06
M80340_1(M80340|pid:none) Homo sapiens transposon L1.1 ORF2 gene... 56 4e-06
I38588(I38588) reverse transcriptase homolog - human retrotransp... 56 4e-06
AF421375_1(AF421375|pid:none) Homo sapiens L1IGL LINE element in... 56 4e-06
AF003535_1(AF003535|pid:none) Homo sapiens L1 element ORF2-like ... 56 4e-06
AF149422_2(AF149422|pid:none) Homo sapiens LINE1 element inserte... 56 4e-06
U93565_1(U93565|pid:none) Human L1 element L1.12 putative p150 g... 56 4e-06
AF466202_16(AF466202|pid:none) Zea mays putative pol protein gen... 55 5e-06
AC135415_5(AC135415|pid:none) Medicago truncatula clone mth2-10b... 55 5e-06
M22333_1(M22333|pid:none) Human factor VIII gene L1 element inse... 55 5e-06
M80343_2(M80343|pid:none) Human transposon L1.2. 55 5e-06
X52235_2(X52235|pid:none) Human DNA for LINE-1 transposable elem... 55 6e-06
S23650(S23650)retrovirus-related hypothetical protein II - human... 55 6e-06
EU810765_17(EU810765|pid:none) Sorghum bicolor clone BAC Sbb1244... 55 6e-06
U93568_2(U93568|pid:none) Human L1 element L1.19 p40 and putativ... 55 8e-06
DQ008121_1(DQ008121|pid:none) Schistosoma mansoni transposon non... 54 1e-05
AC144619_3(AC144619|pid:none) Medicago truncatula clone mth2-8n3... 54 1e-05
AC174468_6(AC174468|pid:none) Medicago truncatula chromosome 2 c... 54 1e-05
AB097124_1(AB097124|pid:none) Ciona intestinalis retrotransposon... 54 1e-05
AC144538_1(AC144538|pid:none) Medicago truncatula clone mth2-31l... 54 1e-05
EF657230_14(EF657230|pid:none) Cucumis melo clone BAC 13J4, comp... 54 1e-05
EU379001_1(EU379001|pid:none) Arabidopsis lyrata subsp. petraea ... 54 1e-05
U93570_2(U93570|pid:none) Human L1 element L1.21 p40 and putativ... 54 2e-05
H44490(H44490;C40442)retrovirus-related reverse transcriptase ho... 54 2e-05
(Q03274) RecName: Full=Retrovirus-related Pol polyprotein from t... 54 2e-05
AK127459_1(AK127459|pid:none) Homo sapiens cDNA FLJ45551 fis, cl... 53 2e-05
AC119292_2(AC119292|pid:none) Oryza sativa (japonica cultivar-gr... 53 2e-05
AX878771_1(AX878771|pid:none) Sequence 13676 from Patent EP10746... 53 2e-05
AX881382_1(AX881382|pid:none) Sequence 16287 from Patent EP10746... 53 2e-05
AC084818_14(AC084818|pid:none) Oryza sativa (japonica cultivar-g... 53 3e-05
AF077409_7(AF077409|pid:none) Arabidopsis thaliana BAC T24M8. &... 53 3e-05
AC004793_4(AC004793|pid:none) Arabidopsis thaliana chromosome 1 ... 53 3e-05
FM992689_233(FM992689|pid:none) Candida dubliniensis CD36 chromo... 52 4e-05
AC136971_20(AC136971|pid:none) Oryza sativa (japonica cultivar-g... 52 4e-05
M13100_5(M13100|pid:none) Rat long interspersed repetitive DNA s... 52 4e-05
AB018120_9(AB018120|pid:none) Arabidopsis thaliana genomic DNA, ... 52 5e-05
AK229858_1(AK229858|pid:none) Arabidopsis thaliana mRNA for hypo... 52 5e-05
AP008211_647(AP008211|pid:none) Oryza sativa (japonica cultivar-... 52 7e-05
AK127765_1(AK127765|pid:none) Homo sapiens cDNA FLJ45866 fis, cl... 52 7e-05
AC137829_11(AC137829|pid:none) Medicago truncatula clone mth2-34... 52 7e-05
AC112209_5(AC112209|pid:none) Oryza sativa (japonica cultivar-gr... 51 9e-05
AC078894_13(AC078894|pid:none) Oryza sativa (japonica cultivar-g... 51 9e-05
DQ456868_2(DQ456868|pid:none) Pan troglodytes clone L1.790 retro... 51 9e-05
AC134046_30(AC134046|pid:none) Oryza sativa (japonica cultivar-g... 51 1e-04
AB097121_1(AB097121|pid:none) Ciona intestinalis retrotransposon... 51 1e-04
CR933497_15(CR933497|pid:none) Oryza sativa (japonica cultivar-g... 51 1e-04
AC136450_9(AC136450|pid:none) Medicago truncatula clone mth2-34d... 51 1e-04
AC138006_2(AC138006|pid:none) Oryza sativa (japonica cultivar-gr... 51 1e-04
AC148918_11(AC148918|pid:none) Medicago truncatula chromosome 2 ... 50 2e-04
AB097123_1(AB097123|pid:none) Ciona intestinalis retrotransposon... 50 2e-04
PH0217(PH0217)reverse transcriptase-like protein - rat (fragment) 50 2e-04
AC150980_15(AC150980|pid:none) Medicago truncatula clone mth2-16... 50 2e-04
AK127847_1(AK127847|pid:none) Homo sapiens cDNA FLJ45950 fis, cl... 50 2e-04
AL662961_12(AL662961|pid:none) Oryza sativa genomic DNA, chromos... 50 3e-04
AM465358_1(AM465358|pid:none) Vitis vinifera contig VV78X103665.... 50 3e-04
AB097129_1(AB097129|pid:none) Entamoeba histolytica retrotranspo... 50 3e-04
AB028611_16(AB028611|pid:none) Arabidopsis thaliana genomic DNA,... 50 3e-04
FM992689_2(FM992689|pid:none) Candida dubliniensis CD36 chromoso... 50 3e-04
AC135100_21(AC135100|pid:none) Medicago truncatula clone mth2-17... 50 3e-04
AK001056_1(AK001056|pid:none) Homo sapiens cDNA FLJ10194 fis, cl... 50 3e-04
AL606682_7(AL606682|pid:none) Oryza sativa genomic DNA, chromoso... 49 3e-04
AC151742_29(AC151742|pid:none) Medicago truncatula clone mth2-83... 49 3e-04
AM482702_2(AM482702|pid:none) Vitis vinifera contig VV78X046722.... 49 3e-04
AL663019_4(AL663019|pid:none) Oryza sativa genomic DNA, chromoso... 49 3e-04
AB097148_2(AB097148|pid:none) Anopheles gambiae retrotransposon ... 49 3e-04
AK126793_1(AK126793|pid:none) Homo sapiens cDNA FLJ44843 fis, cl... 49 3e-04
AC146909_27(AC146909|pid:none) Medicago truncatula clone mth2-57... 49 3e-04
AJ893356_28(AJ893356|pid:none) Phytophthora infestans, clone PI-... 49 5e-04
AL606694_8(AL606694|pid:none) Oryza sativa genomic DNA, chromoso... 49 5e-04
AC121244_24(AC121244|pid:none) Medicago truncatula clone mth2-31... 49 5e-04
AF055641_2(AF055641|pid:none) Oryzias latipes SW1 retrotransposo... 49 5e-04
AK091740_1(AK091740|pid:none) Homo sapiens cDNA FLJ34421 fis, cl... 49 5e-04
AF055640_2(AF055640|pid:none) Oryzias latipes SW1 retrotransposo... 49 6e-04
AC152407_17(AC152407|pid:none) Medicago truncatula clone mth2-77... 49 6e-04
AF436853_1(AF436853|pid:none) Bombyx mori R2 element reverse tra... 48 8e-04
AC124956_20(AC124956|pid:none) Medicago truncatula clone mth2-14... 48 0.001
AC151666_10(AC151666|pid:none) Medicago truncatula clone mth2-30... 48 0.001
AM438944_1(AM438944|pid:none) Vitis vinifera contig VV78X021237.... 48 0.001
AM460806_1(AM460806|pid:none) Vitis vinifera contig VV78X222441.... 48 0.001
AC145219_28(AC145219|pid:none) Medicago truncatula clone mth2-6m... 47 0.001
AL731585_4(AL731585|pid:none) Oryza sativa genomic DNA, chromoso... 47 0.001
AC137081_5(AC137081|pid:none) Medicago truncatula clone mth2-10j... 47 0.001
AC155228_12(AC155228|pid:none) Medicago truncatula clone mth2-13... 47 0.001
CR855229_19(CR855229|pid:none) Oryza sativa genomic DNA, chromos... 47 0.001
AC146564_1(AC146564|pid:none) Medicago truncatula clone mth2-67l... 47 0.001
AC125474_13(AC125474|pid:none) Medicago truncatula clone mth2-16... 47 0.001
Y13373_1(Y13373|pid:none) A.cepa gene encoding reverse transcrip... 47 0.001
AC006136_14(AC006136|pid:none) Arabidopsis thaliana chromosome 2... 47 0.002
AM465225_1(AM465225|pid:none) Vitis vinifera contig VV78X042668.... 47 0.002
AC120989_6(AC120989|pid:none) Oryza sativa (japonica cultivar-gr... 47 0.002
AL731579_18(AL731579|pid:none) Oryza sativa genomic DNA, chromos... 47 0.002
AC143337_1(AC143337|pid:none) Medicago truncatula clone mth2-35d... 47 0.002
AM426005_1(AM426005|pid:none) Vitis vinifera contig VV78X108753.... 47 0.002
AY027869_1(AY027869|pid:none) Schistosoma japonicum retrotranspo... 47 0.002
AF412214_1(AF412214|pid:none) Schistosoma japonicum clone S10A n... 47 0.002
AC137829_14(AC137829|pid:none) Medicago truncatula clone mth2-34... 47 0.002
AL662987_7(AL662987|pid:none) Oryza sativa genomic DNA, chromoso... 47 0.002
AC135558_6(AC135558|pid:none) Oryza sativa (japonica cultivar-gr... 46 0.003
AC140722_9(AC140722|pid:none) Medicago truncatula clone mth2-14e... 46 0.003
AC137701_4(AC137701|pid:none) Medicago truncatula clone mth2-35h... 46 0.003
AM426113_3(AM426113|pid:none) Vitis vinifera contig VV78X169288.... 46 0.003
AC135209_17(AC135209|pid:none) Oryza sativa (japonica cultivar-g... 46 0.003
T21231(T21231)hypothetical protein F22B3.3 - Caenorhabditis eleg... 46 0.004
AM489137_4(AM489137|pid:none) Vitis vinifera contig VV78X201315.... 46 0.004
M22334_1(M22334|pid:none) Human factor VIII gene L1 element inse... 46 0.004
M13101_1(M13101|pid:none) Rat long interspersed repetitive DNA s... 46 0.004
T25352(T25352)hypothetical protein T27C5.9 - Caenorhabditis eleg... 46 0.004
AL844509_243(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 46 0.004
AM432089_1(AM432089|pid:none) Vitis vinifera contig VV78X095327.... 46 0.004
T20051(T20051;T23335)hypothetical protein C49A1.8 - Caenorhabdit... 46 0.004
AC147430_15(AC147430|pid:none) Medicago truncatula clone mth2-71... 45 0.005
AK229033_1(AK229033|pid:none) Arabidopsis thaliana mRNA for puta... 45 0.005
AC118980_11(AC118980|pid:none) Oryza sativa (japonica cultivar-g... 45 0.005
AC002330_24(AC002330|pid:none) Arabidopsis thaliana BAC T10P11 f... 45 0.005
AC122165_6(AC122165|pid:none) Medicago truncatula clone mth2-32m... 45 0.005
AF466646_9(AF466646|pid:none) Zea mays putative transposase (Z19... 45 0.005
AB097126_1(AB097126|pid:none) Danio rerio retrotransposon R2Dr D... 45 0.007
AM429580_1(AM429580|pid:none) Vitis vinifera contig VV78X131936.... 45 0.007
AM454418_1(AM454418|pid:none) Vitis vinifera contig VV78X081721.... 45 0.009
AM442190_1(AM442190|pid:none) Vitis vinifera contig VV78X257344.... 45 0.009
AP008218_303(AP008218|pid:none) Oryza sativa (japonica cultivar-... 45 0.009
AM465838_1(AM465838|pid:none) Vitis vinifera contig VV78X225194.... 45 0.009
AB231839_2(AB231839|pid:none) Ipomoea batatas LINE-type retrotra... 45 0.009
AF015685_1(AF015685|pid:none) Drosophila mercatorum R2 retrotran... 45 0.009
AB097138_2(AB097138|pid:none) Danio rerio retrotransposon KibiDr... 45 0.009
AC146341_30(AC146341|pid:none) Medicago truncatula clone mth2-10... 45 0.009
AF015814_1(AF015814|pid:none) Limulus polyphemus retrotransposon... 45 0.009
AM463959_1(AM463959|pid:none) Vitis vinifera contig VV78X194909.... 45 0.009
(P16423) RecName: Full=Retrovirus-related Pol polyprotein from t... 45 0.009
AC098696_15(AC098696|pid:none) Oryza sativa (japonica cultivar-g... 45 0.009
CR855114_5(CR855114|pid:none) Oryza sativa (indica cultivar-grou... 44 0.011
AC135959_15(AC135959|pid:none) Medicago truncatula clone mth2-26... 44 0.011
AY497889_1(AY497889|pid:none) Rivulus marmoratus isolate Rm_A2_9... 44 0.011
AM486589_3(AM486589|pid:none) Vitis vinifera contig VV78X181735.... 44 0.011
AC134046_29(AC134046|pid:none) Oryza sativa (japonica cultivar-g... 44 0.011
AC152423_3(AC152423|pid:none) Medicago truncatula clone mth2-31c... 44 0.011
AC146341_14(AC146341|pid:none) Medicago truncatula clone mth2-10... 44 0.011
AM477032_1(AM477032|pid:none) Vitis vinifera contig VV78X217674.... 44 0.011
AC137546_9(AC137546|pid:none) Medicago truncatula clone mth2-24g... 44 0.011
AM471427_2(AM471427|pid:none) Vitis vinifera contig VV78X275549.... 44 0.011
AM473328_1(AM473328|pid:none) Vitis vinifera contig VV78X049177.... 44 0.011
AC135102_34(AC135102|pid:none) Medicago truncatula clone mth2-8m... 44 0.011
AC007018_6(AC007018|pid:none) Arabidopsis thaliana chromosome 2 ... 44 0.011
AC124962_10(AC124962|pid:none) Medicago truncatula clone mth2-24... 44 0.011
AM479435_5(AM479435|pid:none) Vitis vinifera contig VV78X070298.... 44 0.011
AC150845_45(AC150845|pid:none) Medicago truncatula clone mth2-15... 44 0.011
AF527809_9(AF527809|pid:none) Sorghum bicolor clone BAC SB_BBc02... 44 0.015
AC144515_3(AC144515|pid:none) Medicago truncatula clone mth2-5j8... 44 0.015
AJ970288_1(AJ970288|pid:none) Toxorhynchites brevipalpis retropo... 44 0.015
AE014186_220(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 44 0.015
AJ970287_1(AJ970287|pid:none) Toxorhynchites brevipalpis retropo... 44 0.015
AM447194_4(AM447194|pid:none) Vitis vinifera contig VV78X145725.... 44 0.015
AL662952_14(AL662952|pid:none) Oryza sativa genomic DNA, chromos... 44 0.015
AC124952_15(AC124952|pid:none) Medicago truncatula clone mth2-24... 44 0.019
AM476167_1(AM476167|pid:none) Vitis vinifera contig VV78X065629.... 44 0.019
AC151666_12(AC151666|pid:none) Medicago truncatula clone mth2-30... 44 0.019
AC137546_16(AC137546|pid:none) Medicago truncatula clone mth2-24... 44 0.019
AP008212_1136(AP008212|pid:none) Oryza sativa (japonica cultivar... 43 0.025
AY180919_1(AY180919|pid:none) Drosophila melanogaster Juan trans... 43 0.025
AF025672_2(AF025672|pid:none) Synthetic construct, reconstructio... 43 0.025
AY497876_1(AY497876|pid:none) Rivulus marmoratus isolate Rm_A1_D... 43 0.025
AY497869_1(AY497869|pid:none) Rivulus marmoratus isolate Rm_A1_2... 43 0.025
AK094887_1(AK094887|pid:none) Homo sapiens cDNA FLJ37568 fis, cl... 43 0.025
AC147000_19(AC147000|pid:none) Medicago truncatula clone mth2-12... 43 0.025
AC090483_7(AC090483|pid:none) Genomic sequence for Oryza sativa,... 43 0.025
AM428732_3(AM428732|pid:none) Vitis vinifera contig VV78X254410.... 43 0.025
AK095784_1(AK095784|pid:none) Homo sapiens cDNA FLJ38465 fis, cl... 43 0.025
AY497870_1(AY497870|pid:none) Rivulus marmoratus isolate Rm_A1_2... 43 0.025
AM481226_1(AM481226|pid:none) Vitis vinifera contig VV78X278905.... 43 0.033
AM480277_2(AM480277|pid:none) Vitis vinifera contig VV78X110525.... 43 0.033
AC157506_14(AC157506|pid:none) Medicago truncatula chromosome 7 ... 43 0.033
AY497816_1(AY497816|pid:none) Fundulus heteroclitus isolate Fh_A... 43 0.033
AC104433_31(AC104433|pid:none) Oryza sativa chromosome 3 BAC OJ1... 43 0.033
AL606599_5(AL606599|pid:none) Oryza sativa genomic DNA, chromoso... 43 0.033
AM482922_1(AM482922|pid:none) Vitis vinifera contig VV78X206068.... 43 0.033
AM450460_1(AM450460|pid:none) Vitis vinifera contig VV78X242107.... 43 0.033
AC124218_17(AC124218|pid:none) Medicago truncatula clone mth2-30... 43 0.033
AC146562_25(AC146562|pid:none) Medicago truncatula clone mth2-14... 43 0.033
AC069300_13(AC069300|pid:none) Oryza sativa chromosome 10 BAC OS... 43 0.033
AL844503_167(AL844503|pid:none) Plasmodium falciparum 3D7 chromo... 42 0.043
AL035476_49(AL035476|pid:none) Plasmodium falciparum MAL4P3. 42 0.043
AC140549_21(AC140549|pid:none) Medicago truncatula clone mth2-28... 42 0.043
AM466040_3(AM466040|pid:none) Vitis vinifera contig VV78X237948.... 42 0.043
AM443937_1(AM443937|pid:none) Vitis vinifera contig VV78X150239.... 42 0.043
AC147405_12(AC147405|pid:none) Medicago truncatula clone mth2-14... 42 0.043
AC148360_7(AC148360|pid:none) Medicago truncatula clone mth2-27i... 42 0.043
AC124955_21(AC124955|pid:none) Medicago truncatula clone mth2-12... 42 0.043
AM486280_5(AM486280|pid:none) Vitis vinifera contig VV78X072852.... 42 0.043
AM437456_2(AM437456|pid:none) Vitis vinifera contig VV78X188142.... 42 0.056
AC068924_2(AC068924|pid:none) Oryza sativa chromosome 10 BAC OSJ... 42 0.056
AY809983_1(AY809983|pid:none) Schistosoma japonicum SJCHGC09318 ... 42 0.056
AC140545_18(AC140545|pid:none) Medicago truncatula clone mth2-11... 42 0.056
AM433325_1(AM433325|pid:none) Vitis vinifera contig VV78X049534.... 42 0.056
AC137078_2(AC137078|pid:none) Medicago truncatula clone mth2-10e... 42 0.056
AM477125_3(AM477125|pid:none) Vitis vinifera contig VV78X055182.... 42 0.056
AF527807_6(AF527807|pid:none) Sorghum bicolor clone BAC SB_BBc01... 42 0.056
AM439405_5(AM439405|pid:none) Vitis vinifera contig VV78X120490.... 42 0.073
AL034558_43(AL034558|pid:none) Plasmodium falciparum MAL3P2, com... 42 0.073
AM488607_1(AM488607|pid:none) Vitis vinifera contig VV78X126057.... 42 0.073
AC007509_5(AC007509|pid:none) Arabidopsis thaliana chromosome 2 ... 42 0.073
AC140027_25(AC140027|pid:none) Medicago truncatula clone mth2-5m... 42 0.073
AM482073_1(AM482073|pid:none) Vitis vinifera contig VV78X077641.... 42 0.073
AM438889_1(AM438889|pid:none) Vitis vinifera contig VV78X019687.... 42 0.073
AM453459_1(AM453459|pid:none) Vitis vinifera contig VV78X074218.... 42 0.073
T23191(T23191)hypothetical protein K01G12.1 - Caenorhabditis ele... 42 0.073
AL844503_170(AL844503|pid:none) Plasmodium falciparum 3D7 chromo... 42 0.073
AY497858_1(AY497858|pid:none) Menidia beryllina isolate Mb_A1_1 ... 42 0.073
AM474896_3(AM474896|pid:none) Vitis vinifera contig VV79X001698.... 42 0.073
AL035476_52(AL035476|pid:none) Plasmodium falciparum MAL4P3. 42 0.073
AC134242_28(AC134242|pid:none) Medicago truncatula clone mth2-10... 42 0.073
AM436748_1(AM436748|pid:none) Vitis vinifera contig VV78X027943.... 42 0.073
AM454583_2(AM454583|pid:none) Vitis vinifera contig VV78X158267.... 42 0.073
AF096370_7(AF096370|pid:none) Arabidopsis thaliana BAC F11O4. &... 42 0.073
AB097137_2(AB097137|pid:none) Tetraodon nigroviridis retrotransp... 42 0.073
AM437489_2(AM437489|pid:none) Vitis vinifera contig VV78X161143.... 42 0.073
AM487494_1(AM487494|pid:none) Vitis vinifera contig VV78X197132.... 41 0.095
AC132491_7(AC132491|pid:none) Oryza sativa (japonica cultivar-gr... 41 0.095
AE014186_457(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 41 0.095
AC113336_23(AC113336|pid:none) Genomic sequence for Oryza sativa... 41 0.095
AC170583_22(AC170583|pid:none) Medicago truncatula clone mth2-19... 41 0.095
AJ302712_2(AJ302712|pid:none) Drosophila melanogaster transposon... 41 0.095
AC134822_10(AC134822|pid:none) Medicago truncatula clone mth2-15... 41 0.095
AC138171_21(AC138171|pid:none) Medicago truncatula clone mth2-7f... 41 0.095
AM431356_1(AM431356|pid:none) Vitis vinifera contig VV78X056160.... 41 0.095
AC147006_22(AC147006|pid:none) Medicago truncatula clone mth2-62... 41 0.095
AM424252_6(AM424252|pid:none) Vitis vinifera contig VV78X140744.... 41 0.095
AM450267_4(AM450267|pid:none) Vitis vinifera contig VV78X266870.... 41 0.095
AM469842_1(AM469842|pid:none) Vitis vinifera contig VV78X177955.... 41 0.095
AM450819_3(AM450819|pid:none) Vitis vinifera contig VV78X205932.... 41 0.095
AM432274_2(AM432274|pid:none) Vitis vinifera contig VV78X112647.... 41 0.095
AC152421_16(AC152421|pid:none) Medicago truncatula clone mth2-7h... 41 0.12
AM431263_4(AM431263|pid:none) Vitis vinifera contig VV78X265007.... 41 0.12
CR855120_9(CR855120|pid:none) Oryza sativa (indica cultivar-grou... 41 0.12
AY497857_1(AY497857|pid:none) Menidia beryllina isolate Mb_A1_8 ... 41 0.12
AM460318_1(AM460318|pid:none) Vitis vinifera contig VV78X168573.... 41 0.12
AM487930_1(AM487930|pid:none) Vitis vinifera contig VV78X229798.... 41 0.12
AY497865_1(AY497865|pid:none) Rivulus marmoratus isolate Rm_A1_1... 41 0.12
AM460027_3(AM460027|pid:none) Vitis vinifera contig VV78X017061.... 41 0.12
AM463484_3(AM463484|pid:none) Vitis vinifera contig VV78X172556.... 41 0.12
AM455857_3(AM455857|pid:none) Vitis vinifera contig VV78X172851.... 41 0.12
AM474436_1(AM474436|pid:none) Vitis vinifera contig VV78X241065.... 41 0.12
AM449495_1(AM449495|pid:none) Vitis vinifera contig VV78X164747.... 41 0.12
AL731596_19(AL731596|pid:none) Oryza sativa genomic DNA, chromos... 41 0.12
AC096855_26(AC096855|pid:none) Oryza sativa chromosome 3 BAC OJ1... 40 0.16
AM427207_2(AM427207|pid:none) Vitis vinifera contig VV78X248088.... 40 0.16
AM425304_1(AM425304|pid:none) Vitis vinifera contig VV78X040453.... 40 0.16
AC153725_12(AC153725|pid:none) Medicago truncatula clone mth2-78... 40 0.16
AF369890_3(AF369890|pid:none) Branchiostoma floridae extracellul... 40 0.16
AM459455_1(AM459455|pid:none) Vitis vinifera contig VV78X172017.... 40 0.16
AM437481_3(AM437481|pid:none) Vitis vinifera contig VV78X119142.... 40 0.16
AC151708_18(AC151708|pid:none) Medicago truncatula clone mth2-15... 40 0.16
AL662935_6(AL662935|pid:none) Oryza sativa genomic DNA, chromoso... 40 0.16
AM462678_4(AM462678|pid:none) Vitis vinifera contig VV78X201477.... 40 0.21
AX881970_1(AX881970|pid:none) Sequence 16875 from Patent EP10746... 40 0.21
AL662944_15(AL662944|pid:none) Oryza sativa genomic DNA, chromos... 40 0.21
AM482737_1(AM482737|pid:none) Vitis vinifera contig VV78X179365.... 40 0.21
T18484(T18484)hypothetical protein C0850c - malaria parasite (Pl... 40 0.21
AM459840_1(AM459840|pid:none) Vitis vinifera contig VV79X001603.... 40 0.21
AC157978_28(AC157978|pid:none) Medicago truncatula clone mth2-47... 40 0.21
AL844502_187(AL844502|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.21
AE014188_85(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 40 0.21
AC124954_8(AC124954|pid:none) Medicago truncatula clone mth2-10g... 40 0.21
AC137922_24(AC137922|pid:none) Oryza sativa (japonica cultivar-g... 40 0.21
AM459135_1(AM459135|pid:none) Vitis vinifera contig VV78X126341.... 40 0.21
AM439733_1(AM439733|pid:none) Vitis vinifera contig VV78X109517.... 40 0.21
EU004203_6(EU004203|pid:none) Saccharomyces cerevisiae YJM789 mi... 40 0.28
AC145219_23(AC145219|pid:none) Medicago truncatula clone mth2-6m... 40 0.28
AC149304_4(AC149304|pid:none) Medicago truncatula clone mth2-76g... 40 0.28
AM429362_1(AM429362|pid:none) Vitis vinifera contig VV78X247281.... 40 0.28
AC157472_15(AC157472|pid:none) Medicago truncatula chromosome 7 ... 40 0.28
AM441717_1(AM441717|pid:none) Vitis vinifera contig VV78X067425.... 40 0.28
AM465203_1(AM465203|pid:none) Vitis vinifera contig VV78X111937.... 40 0.28
AC121246_4(AC121246|pid:none) Medicago truncatula clone mth2-35m... 40 0.28
AM487262_1(AM487262|pid:none) Vitis vinifera contig VV78X119369.... 40 0.28
AM460427_1(AM460427|pid:none) Vitis vinifera contig VV78X219843.... 40 0.28
AC146751_10(AC146751|pid:none) Medicago truncatula clone mth2-60... 40 0.28
AM448842_2(AM448842|pid:none) Vitis vinifera contig VV78X109940.... 40 0.28
AC119409_9(AC119409|pid:none) Medicago truncatula clone mth2-10i... 40 0.28
AC146816_17(AC146816|pid:none) Oryza sativa (japonica cultivar-g... 39 0.36
AC135565_13(AC135565|pid:none) Medicago truncatula clone mth2-19... 39 0.36
AC174351_12(AC174351|pid:none) Medicago truncatula clone mth2-7h... 39 0.36
AM463986_3(AM463986|pid:none) Vitis vinifera contig VV78X059004.... 39 0.36
AC079679_3(AC079679|pid:none) Arabidopsis thaliana chromosome 1 ... 39 0.36
AY497810_1(AY497810|pid:none) Fundulus heteroclitus isolate Fh_A... 39 0.36
Y13391_1(Y13391|pid:none) Beta lomatogona gene encoding reverse ... 39 0.36
AM487466_1(AM487466|pid:none) Vitis vinifera contig VV78X228267.... 39 0.36
AM430000_1(AM430000|pid:none) Vitis vinifera contig VV78X017225.... 39 0.36
AM463794_2(AM463794|pid:none) Vitis vinifera contig VV78X185588.... 39 0.36
AM436605_3(AM436605|pid:none) Vitis vinifera contig VV78X054887.... 39 0.36
AC097447_2(AC097447|pid:none) Oryza sativa (japonica cultivar-gr... 39 0.36
AC122167_23(AC122167|pid:none) Medicago truncatula clone mth1-10... 39 0.36
AM462910_3(AM462910|pid:none) Vitis vinifera contig VV78X047352.... 39 0.36
L25663_2(L25663|pid:none) Neurospora crassa Tad3-2 LINE-like ele... 39 0.36
AM477849_2(AM477849|pid:none) Vitis vinifera contig VV78X098823.... 39 0.36
AB208064_7(AB208064|pid:none) Echinococcus shiquicus mitochondri... 39 0.36
AM459791_5(AM459791|pid:none) Vitis vinifera contig VV78X112489.... 39 0.47
AJ417800_1(AJ417800|pid:none) Brassica rapa subsp. oleifera DNA ... 39 0.47
AM469298_2(AM469298|pid:none) Vitis vinifera contig VV78X152912.... 39 0.47
AC134322_4(AC134322|pid:none) Medicago truncatula clone mth2-17i... 39 0.47
AC003952_10(AC003952|pid:none) Arabidopsis thaliana chromosome I... 39 0.47
AM488988_1(AM488988|pid:none) Vitis vinifera contig VV78X198686.... 39 0.47
AM444890_2(AM444890|pid:none) Vitis vinifera contig VV78X065188.... 39 0.47
AM443227_1(AM443227|pid:none) Vitis vinifera contig VV79X000254.... 39 0.47
AY497776_1(AY497776|pid:none) Cyprinodon variegatus isolate Cv_A... 39 0.47
AM468072_5(AM468072|pid:none) Vitis vinifera contig VV78X275177.... 39 0.47
AY497887_1(AY497887|pid:none) Rivulus marmoratus isolate Rm_A2_5... 39 0.47
AC144343_28(AC144343|pid:none) Medicago truncatula clone mth2-12... 39 0.47
AM426217_1(AM426217|pid:none) Vitis vinifera contig VV78X261440.... 39 0.47
T17102(T17102) RNA-directed DNA polymerase (EC 2.7.7.49) (clone ... 39 0.47
AY497777_1(AY497777|pid:none) Cyprinodon variegatus isolate Cv_A... 39 0.47
AM470881_2(AM470881|pid:none) Vitis vinifera contig VV78X087375.... 39 0.62
AM481002_3(AM481002|pid:none) Vitis vinifera contig VV78X251953.... 39 0.62
(P61243) RecName: Full=Protein ycf2; &AP005672_45(AP005672|pid:... 39 0.62
AC146755_18(AC146755|pid:none) Medicago truncatula clone mth2-15... 39 0.62
AL080318_2(AL080318|pid:none) Arabidopsis thaliana DNA chromosom... 39 0.62
AM432923_7(AM432923|pid:none) Vitis vinifera contig VV78X212839.... 39 0.62
AE014185_231(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.62
AY497866_1(AY497866|pid:none) Rivulus marmoratus isolate Rm_A1_1... 39 0.62
AM426079_1(AM426079|pid:none) Vitis vinifera contig VV78X044136.... 39 0.62
AM488068_3(AM488068|pid:none) Vitis vinifera contig VV78X124178.... 39 0.62
AC146866_31(AC146866|pid:none) Medicago truncatula clone mth2-19... 39 0.62
AM439246_5(AM439246|pid:none) Vitis vinifera contig VV78X216287.... 39 0.62
AE014185_240(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.62
AC136953_2(AC136953|pid:none) Medicago truncatula clone mth2-20h... 39 0.62
AM424116_1(AM424116|pid:none) Vitis vinifera contig VV78X253426.... 39 0.62
AY497818_1(AY497818|pid:none) Fundulus heteroclitus isolate Fh_A... 39 0.62
AM451816_2(AM451816|pid:none) Vitis vinifera contig VV79X001917.... 39 0.62
AE014185_293(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.62
AL606691_14(AL606691|pid:none) Oryza sativa genomic DNA, chromos... 39 0.62
AM451709_1(AM451709|pid:none) Vitis vinifera contig VV78X005847.... 39 0.62
AC005315_6(AC005315|pid:none) Arabidopsis thaliana chromosome 2 ... 39 0.62
AE014187_461(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 39 0.62
AE014188_63(AE014188|pid:none) Plasmodium falciparum 3D7 chromos... 39 0.62
AM472146_1(AM472146|pid:none) Vitis vinifera contig VV78X230972.... 39 0.62
AM485155_1(AM485155|pid:none) Vitis vinifera contig VV78X274924.... 38 0.80
AM428574_2(AM428574|pid:none) Vitis vinifera contig VV78X201224.... 38 0.80
AB097128_1(AB097128|pid:none) Entamoeba histolytica retrotranspo... 38 0.80
AM451039_6(AM451039|pid:none) Vitis vinifera contig VV78X256955.... 38 0.80
AM451364_6(AM451364|pid:none) Vitis vinifera contig VV78X256870.... 38 0.80
AM429075_2(AM429075|pid:none) Vitis vinifera contig VV78X038035.... 38 0.80
AC006067_18(AC006067|pid:none) Arabidopsis thaliana chromosome 2... 38 0.80
AC027038_17(AC027038|pid:none) Oryza sativa chromosome 10 BAC OS... 38 0.80
AM430741_2(AM430741|pid:none) Vitis vinifera contig VV78X278196.... 38 0.80
AC149129_1(AC149129|pid:none) Medicago truncatula chromosome 7 c... 38 0.80
AM487368_2(AM487368|pid:none) Vitis vinifera contig VV78X074410.... 38 0.80
AY497783_1(AY497783|pid:none) Cyprinodon variegatus isolate Cv_A... 38 0.80
AM478628_2(AM478628|pid:none) Vitis vinifera contig VV78X265481.... 38 0.80
AM436077_1(AM436077|pid:none) Vitis vinifera contig VV78X006229.... 38 0.80
AM467485_2(AM467485|pid:none) Vitis vinifera contig VV78X175065.... 38 0.80
AL844508_52(AL844508|pid:none) Plasmodium falciparum 3D7 chromos... 38 0.80
AY497859_1(AY497859|pid:none) Menidia beryllina isolate Mb_A1_2 ... 38 0.80
AP008216_782(AP008216|pid:none) Oryza sativa (japonica cultivar-... 38 0.80
AM487264_3(AM487264|pid:none) Vitis vinifera contig VV78X273437.... 38 0.80
AM435679_2(AM435679|pid:none) Vitis vinifera contig VV78X268665.... 38 0.80
AM472760_6(AM472760|pid:none) Vitis vinifera contig VV78X025654.... 38 0.80
AC148340_18(AC148340|pid:none) Medicago truncatula chromosome 2 ... 38 1.1
AL844507_102(AL844507|pid:none) Plasmodium falciparum 3D7 chromo... 38 1.1
AM478526_2(AM478526|pid:none) Vitis vinifera contig VV78X079656.... 38 1.1
AY497812_1(AY497812|pid:none) Fundulus heteroclitus isolate Fh_A... 38 1.1
AY497807_1(AY497807|pid:none) Fundulus heteroclitus isolate Fh_A... 38 1.1
AM428496_1(AM428496|pid:none) Vitis vinifera contig VV78X200346.... 38 1.1
AB011485_8(AB011485|pid:none) Arabidopsis thaliana genomic DNA, ... 38 1.1
(Q03279) RecName: Full=Retrovirus-related Pol polyprotein from t... 38 1.1
AL844506_235(AL844506|pid:none) Plasmodium falciparum 3D7 chromo... 38 1.1
AC148178_8(AC148178|pid:none) Medicago truncatula clone mth2-5b2... 38 1.1
AM472395_1(AM472395|pid:none) Vitis vinifera contig VV78X135216.... 38 1.1
AM481260_2(AM481260|pid:none) Vitis vinifera contig VV78X161420.... 38 1.1
AM439120_1(AM439120|pid:none) Vitis vinifera contig VV78X210867.... 38 1.1
AC158172_19(AC158172|pid:none) Medicago truncatula clone mth2-14... 38 1.1
AC152406_13(AC152406|pid:none) Medicago truncatula clone mth2-71... 38 1.1
AM475512_1(AM475512|pid:none) Vitis vinifera contig VV78X096952.... 38 1.1
AM455577_2(AM455577|pid:none) Vitis vinifera contig VV78X164747.... 38 1.1
AM451855_1(AM451855|pid:none) Vitis vinifera contig VV78X013107.... 37 1.4
AC004483_5(AC004483|pid:none) Arabidopsis thaliana chromosome 2 ... 37 1.4
AL844503_189(AL844503|pid:none) Plasmodium falciparum 3D7 chromo... 37 1.4
AM481431_3(AM481431|pid:none) Vitis vinifera contig VV78X083295.... 37 1.4
AC007071_4(AC007071|pid:none) Arabidopsis thaliana chromosome 2 ... 37 1.4
FM995164_1(FM995164|pid:none) Nakaseomyces delphensis complete m... 37 1.4
AM446005_4(AM446005|pid:none) Vitis vinifera contig VV78X057739.... 37 1.4
AM464142_3(AM464142|pid:none) Vitis vinifera contig VV78X257371.... 37 1.4
AC006300_20(AC006300|pid:none) Arabidopsis thaliana chromosome 2... 37 1.4
(P02381) RecName: Full=Ribosomal protein VAR1, mitochondrial; &... 37 1.4
AM439013_1(AM439013|pid:none) Vitis vinifera contig VV78X178010.... 37 1.4
AM464279_1(AM464279|pid:none) Vitis vinifera contig VV78X093338.... 37 1.4
AM429684_1(AM429684|pid:none) Vitis vinifera contig VV78X011738.... 37 1.4
AF352409_1(AF352409|pid:none) Kiefferulus sp. 'cornishi' clone K... 37 1.8
AL844505_35(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 37 1.8
AC149546_3(AC149546|pid:none) Medicago truncatula clone mth2-70o... 37 1.8
AM475519_1(AM475519|pid:none) Vitis vinifera contig VV78X024119.... 37 1.8
AM486190_1(AM486190|pid:none) Vitis vinifera contig VV78X000824.... 37 1.8
AJ970254_1(AJ970254|pid:none) Anopheles stephensi retroposon 1 A... 37 1.8
(Q35905) RecName: Full=Ribosomal protein VAR1, mitochondrial; &... 37 1.8
AY149466_1(AY149466|pid:none) Euprymna scolopes LINE1-like RNA-d... 37 1.8
AM481862_1(AM481862|pid:none) Vitis vinifera contig VV78X271043.... 37 1.8
AY878356_1(AY878356|pid:none) Homo sapiens reverse transcriptase... 37 1.8
AJ970256_1(AJ970256|pid:none) Anopheles stephensi retroposon 1 A... 37 1.8
AM475320_1(AM475320|pid:none) Vitis vinifera contig VV78X164089.... 37 1.8
AM425450_1(AM425450|pid:none) Vitis vinifera contig VV78X052641.... 37 1.8
AC174351_18(AC174351|pid:none) Medicago truncatula clone mth2-7h... 37 1.8
AM475086_1(AM475086|pid:none) Vitis vinifera contig VV78X178259.... 37 1.8
AJ970223_1(AJ970223|pid:none) Aedes aegypti retroposon 37 Ae aeg... 37 1.8
AP008218_288(AP008218|pid:none) Oryza sativa (japonica cultivar-... 37 1.8
AM478664_2(AM478664|pid:none) Vitis vinifera contig VV78X134899.... 37 1.8
AE014186_20(AE014186|pid:none) Plasmodium falciparum 3D7 chromos... 37 1.8
AM477000_3(AM477000|pid:none) Vitis vinifera contig VV78X073073.... 37 1.8
CR940352_371(CR940352|pid:none) Theileria annulata strain Ankara... 37 1.8
AL844503_32(AL844503|pid:none) Plasmodium falciparum 3D7 chromos... 37 2.3
AM429661_1(AM429661|pid:none) Vitis vinifera contig VV78X051068.... 37 2.3
AM461019_1(AM461019|pid:none) Vitis vinifera contig VV78X123860.... 37 2.3
AM481736_1(AM481736|pid:none) Vitis vinifera contig VV78X018991.... 37 2.3
AC146566_16(AC146566|pid:none) Medicago truncatula clone mth2-71... 37 2.3
AC025294_10(AC025294|pid:none) Arabidopsis thaliana chromosome 1... 37 2.3
AL034557_32(AL034557|pid:none) Plasmodium falciparum MAL4P1. 37 2.3
AM475797_1(AM475797|pid:none) Vitis vinifera contig VV78X140217.... 37 2.3
L36900_1(L36900|pid:none) Saccharomyces cerevisiae mitochondrion... 37 2.3
BX548174_1269(BX548174|pid:none) Prochlorococcus marinus MED4 co... 37 2.3
(Q75JZ0) RecName: Full=GATA zinc finger domain-containing protei... 37 2.3
AM448435_4(AM448435|pid:none) Vitis vinifera contig VV78X199971.... 37 2.3
AE014186_139(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 37 2.3
AM469512_1(AM469512|pid:none) Vitis vinifera contig VV78X063211.... 37 2.3
AM436489_1(AM436489|pid:none) Vitis vinifera contig VV78X120192.... 37 2.3
AF015815_1(AF015815|pid:none) Anurida maritima retrotransposon R... 37 2.3
AM479021_1(AM479021|pid:none) Vitis vinifera contig VV78X033877.... 37 2.3
AL844508_102(AL844508|pid:none) Plasmodium falciparum 3D7 chromo... 36 3.1
AY894783_1(AY894783|pid:none) Iurus dufoureius clone 1 CR1 famil... 36 3.1
AC123570_4(AC123570|pid:none) Medicago truncatula clone mth2-33l... 36 3.1
AC148396_10(AC148396|pid:none) Medicago truncatula chromosome 2 ... 36 3.1
AM439879_4(AM439879|pid:none) Vitis vinifera contig VV78X214659.... 36 3.1
AM471561_1(AM471561|pid:none) Vitis vinifera contig VV78X257511.... 36 3.1
AM470907_2(AM470907|pid:none) Vitis vinifera contig VV78X107386.... 36 3.1
(A7THU5) RecName: Full=Protein SBE2; 36 3.1
AM464451_1(AM464451|pid:none) Vitis vinifera contig VV78X106698.... 36 3.1
AC004133_24(AC004133|pid:none) Genomic sequence for Arabidopsis ... 36 3.1
AM455848_1(AM455848|pid:none) Vitis vinifera contig VV78X234049.... 36 3.1
AM483589_4(AM483589|pid:none) Vitis vinifera contig VV78X051620.... 36 3.1
S60004(S60004) hypothetical protein - common roundworm retrotran... 36 3.1
AM448640_1(AM448640|pid:none) Vitis vinifera contig VV78X008556.... 36 3.1
>AF134170_2(AF134170|pid:none) Dictyostelium discoideum
retrotransposon TRE3-B, complete sequence.
Length = 1275
Score = 546 bits (1407), Expect = e-154
Identities = 255/269 (94%), Positives = 256/269 (95%)
Frame = +2
Query: 635 QIYPICRRXXXXNQKDYIGKKYSDLLLTSHQQSI*LLWKYTYDQLFVKIQKLKDPKGRDT 814
+IY KDYIGKKYSDLLLTSHQQSI LLWKYTYDQLFVKIQKLKDPKGRDT
Sbjct: 978 EIYSTILNNHQCKSKDYIGKKYSDLLLTSHQQSIQLLWKYTYDQLFVKIQKLKDPKGRDT 1037
Query: 815 MQRFHARCLPINHLHNKVCSICNNEMNNDPYGHLFFNCQHTINFINHDKLKYFIYKNCNG 994
MQRFHARCLPINHLHNKVC ICNNEMNNDPYGHLFFNCQHTINFINHDKLKYFIYKNCNG
Sbjct: 1038 MQRFHARCLPINHLHNKVCPICNNEMNNDPYGHLFFNCQHTINFINHDKLKYFIYKNCNG 1097
Query: 995 NKNWSLTKNQTTKLYTLIYKPQTNNKAFKPDPTININFHFAENAQYKKYRFNWNYINTNL 1174
NKNWSLTKNQTTKLYTLIYKPQTNNKAFKPDPTININFHFAENAQYKKYRFNWNYINTNL
Sbjct: 1098 NKNWSLTKNQTTKLYTLIYKPQTNNKAFKPDPTININFHFAENAQYKKYRFNWNYINTNL 1157
Query: 1175 DLVRTHAYWNIISLVIHQIWIWLCKSLFDINITQSIDNWNNQINNTTLDYDILKSKWHKL 1354
DLVRTHAYWNIISLVIHQIWIWLCKSLFDINITQSIDNWNNQINNTTLDYDILKSKWHKL
Sbjct: 1158 DLVRTHAYWNIISLVIHQIWIWLCKSLFDINITQSIDNWNNQINNTTLDYDILKSKWHKL 1217
Query: 1355 IRLEYSRTLSNFNQYSIKNNLTKTQKETQ 1441
IRLEYSRTLSNFNQYSIKNNLTKTQKETQ
Sbjct: 1218 IRLEYSRTLSNFNQYSIKNNLTKTQKETQ 1246
Score = 246 bits (629), Expect = 1e-63
Identities = 130/154 (84%), Positives = 135/154 (87%), Gaps = 2/154 (1%)
Frame = +3
Query: 201 LLRILPFIVNINQTGFVPYRFXXXXXXXXXXXXXYLKSKNLPGNITLFDFFKAFDS--HD 374
LLRILPFI+N NQTGFVP+RF YLKSKNLPG ITLFDFFKAFDS HD
Sbjct: 533 LLRILPFIINNNQTGFVPHRFIIDNIININELINYLKSKNLPGIITLFDFFKAFDSISHD 592
Query: 375 SIKRTLIHIGIPIKLINIIHKLLSDSQAKISINGKTTRKFDIKSCVKQGDPISATLFVIV 554
SIKRTLIHIGIPIKLIN+IHKLLSDSQAKISINGKTTRKFDIK VKQGDPISATLFVIV
Sbjct: 593 SIKRTLIHIGIPIKLINLIHKLLSDSQAKISINGKTTRKFDIKRGVKQGDPISATLFVIV 652
Query: 555 IEILARTINADNTIIGLPISPNPQIKIKFTQFAE 656
IEILARTINADN+IIGLPISPNPQIKIKFTQFA+
Sbjct: 653 IEILARTINADNSIIGLPISPNPQIKIKFTQFAD 686
Score = 102 bits (255), Expect = 3e-20
Identities = 54/73 (73%), Positives = 59/73 (80%), Gaps = 5/73 (6%)
Frame = +2
Query: 2 KQTQRAKQILLEKAAKFKHLEKQCIAEYNIICNKNKLHQNHTNK*RRN-----TYKYLSA 166
KQTQRAKQILLEKAAKFKHLE+QCIAEYNIICNKNKLHQNHTN +++ KYLSA
Sbjct: 305 KQTQRAKQILLEKAAKFKHLEEQCIAEYNIICNKNKLHQNHTNILKKHINGEIPSKYLSA 364
Query: 167 ILNKDQKMQKLPS 205
ILNK K K+ S
Sbjct: 365 ILNKRSKDAKIES 377
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,186,932,810
Number of extensions: 43784861
Number of successful extensions: 107672
Number of sequences better than 10.0: 584
Number of HSP's gapped: 107267
Number of HSP's successfully gapped: 591
Length of query: 483
Length of database: 1,040,966,779
Length adjustment: 132
Effective length of query: 351
Effective length of database: 618,001,159
Effective search space: 216918406809
Effective search space used: 216918406809
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
1 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |