Contig-U08919-1
Contig ID Contig-U08919-1
Contig update 2002. 9.13
Contig sequence
>Contig-U08919-1 (Contig-U08919-1Q) /CSM_Contig/Contig-U08919-1Q.Seq.d
CCACATTACCAAATTTACCAATTCCAGGTGGTGATAAAATTTCAAAATAT
TGTAGACATACCAATATCACTTGTACACAACCATCAAATAATAAATGTGT
AATCACTGGTTGTTCAAAAGATACCAATGGTAAATGTGAAGTAATTGGTA
ATTTAGAATGTGCCGATAAATCTAAATATTGTATGACGCTAACTGGTTGT
GATCCAAAACTTGGTTGTCAATATAAATCAAATTGTATTGGTCCATGTTT
AACTGGTGAATGTAATAATGGTAAATGTACCAGCATGGATGCTGATTATC
GTTCCAATGAATTGGGTGAAGATCCATGTAAAATTTATAGTTGTAATGCA
AAGAATGGTGGTTGTATGGCAACTCCAAAATGTACTTCCCCTTCCTCCTC
CAATCCATGTGTTATTCCAACTTGCTCCGCTGATAAAGGTGTTTGTGGTA
CATACACTCAAAATAGTACAGAATGTAATTGTAATTGTAAATTAAACCCA
TGTCAAAAGAATAACTGTGATCAAAGTGTAAATCCACC----------CA
ATCGATATTTGTGATAAAAATAACTGGTAGTGTTAAACATACTCCAATGG
AATGTTCTGGTTGTACCAAATGTAATAATGGAAAATGTATTCCAATTGAA
TCCAATTGTGATGATGGTAATTTATGTACCATTGATCAATGTATGAACAA
TGGTAGTTGTATTCACACACCTCTATCATGTAATATCACCAATCCATGTA
TGGATTATACTTGTAATGCTGATATTGGCTGTGTTGGTGTACCAAAAATT
TGTCCAAACAAAGGTAATTGTCTAATTGGTTATTGTGATGCTGGTGAATG
TAAATTAAAAGATCGTATTTGTGACTCACCTTCATTTTGTCAAATTTCTC
AATGTTCCGATGTGACTGGTTGTATTGTTTTCGATAAAGTTTGTATACCT
TCAAATCCAAAATGTGAAACTGGTGTTTGTATAAATGCTACTTCAACTGA
ACCAGGAAGATGTGAATCGGTTGATTTTGATCCAAAACCTTTTGTTTGTA
AACCCGCTGCAATCATATCAACCTCTGTTATTGTTGGTGTTTCAGTCGCT
GCTGCTGTAGTTGCCATTGTTATTGTAGTTGCTTCTAAAAAAGGTTATGA
TGCATGGGCTGCTTCAAATAATAATTNTNCTTGCATNCTTTAACTTCAAA
NCCTTATATGAA

Gap gap included
Contig length 1202
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 3142099
End point 3143303
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 2
Link to clone list U08919
List of clone(s)

est1=CFD531F,1,539
est2=CFD531Z,540,1204
Translated Amino Acid sequence
TLPNLPIPGGDKISKYCRHTNITCTQPSNNKCVITGCSKDTNGKCEVIGNLECADKSKYC
MTLTGCDPKLGCQYKSNCIGPCLTGECNNGKCTSMDADYRSNELGEDPCKIYSCNAKNGG
CMATPKCTSPSSSNPCVIPTCSADKGVCGTYTQNSTECNCNCKLNPCQKNNCDQSVNP--
-

---QSIFVIKITGSVKHTPMECSGCTKCNNGKCIPIESNCDDGNLCTIDQCMNNGSCIHT
PLSCNITNPCMDYTCNADIGCVGVPKICPNKGNCLIGYCDAGECKLKDRICDSPSFCQIS
QCSDVTGCIVFDKVCIPSNPKCETGVCINATSTEPGRCESVDFDPKPFVCKPAAIISTSV
IVGVSVAAAVVAIVIVVASKKGYDAWAASNNNXXCXL*lqxli*


Translated Amino Acid sequence (All Frames)
Frame A:
phyqiyqfqvvikfqnivdipislvhnhqiinv*slvvqkipmvnvk*lvi*nvpinlni
v*r*lvviqnlvvninqivlvhv*lvnvimvnvpawmliivpmnwvkihvkfivvmqrmv
vvwqlqnvlplpppihvlfqlaplikvfvvhtlkivqnvivivn*thvkritvikv*ih-
--

---QSIFVIKITGSVKHTPMECSGCTKCNNGKCIPIESNCDDGNLCTIDQCMNNGSCIHT
PLSCNITNPCMDYTCNADIGCVGVPKICPNKGNCLIGYCDAGECKLKDRICDSPSFCQIS
QCSDVTGCIVFDKVCIPSNPKCETGVCINATSTEPGRCESVDFDPKPFVCKPAAIISTSV
IVGVSVAAAVVAIVIVVASKKGYDAWAASNNNXXCXL*lqxli*

Frame B:
hitkftnsrw**nfkil*tyqyhlyttik**mcnhwlfkryqw*m*snw*frmcr*i*il
ydanwl*sktwlsi*iklywsmfnw*m**w*myqhgc*lsfq*ig*rsm*nl*l*ckeww
lygnskmyfpfllqsmcysnllr**rclwyihsk*yrm*l*l*ikpmske*l*skckst-
--

---nryl**k*lvvlnilqwnvlvvpnvimenvfqlnpivmmviyvplinv*tmvvvfth
lyhvispihvwiilvmlilavlvyqkfvqtkviv*lvivmlvnvn*kivfvthlhfvkfl
nvpm*lvvlfsikfvylqiqnvklvfv*mllqlnqedvnrliliqnllfvnplqsyqpll
llvfqslll*lplll*lllkkvmmhgllqiiixlaxfnfkxlye

Frame C:
TLPNLPIPGGDKISKYCRHTNITCTQPSNNKCVITGCSKDTNGKCEVIGNLECADKSKYC
MTLTGCDPKLGCQYKSNCIGPCLTGECNNGKCTSMDADYRSNELGEDPCKIYSCNAKNGG
CMATPKCTSPSSSNPCVIPTCSADKGVCGTYTQNSTECNCNCKLNPCQKNNCDQSVNP--
-

---idicdknnw*c*tysngmfwlyqm**wkmysn*iql**w*fmyh*smyeqw*lysht
sim*yhqsmyglyl*c*ywlcwctknlskqr*lsnwll*cw*m*ikrsyl*ltfilsnfs
mfrcdwlycfr*slytfkskm*nwclykcyfn*trkm*ig*f*sktfcl*trcnhinlcy
cwcfsrcccschcycscf*krl*cmgcfk**xxlhxltsxpym

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U08919-1 (Contig-U08919-1Q)
/CSM_Contig/Contig-U08919-1Q.Seq.d
(1212 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U08919-1 (Contig-U08919-1Q) /CSM_Contig/Conti... 2319 0.0
Contig-U14788-1 (Contig-U14788-1Q) /CSM_Contig/Conti... 52 1e-06
Contig-U13473-1 (Contig-U13473-1Q) /CSM_Contig/Conti... 50 6e-06
Contig-U13087-1 (Contig-U13087-1Q) /CSM_Contig/Conti... 38 0.022
Contig-U12833-1 (Contig-U12833-1Q) /CSM_Contig/Conti... 38 0.022
Contig-U10529-1 (Contig-U10529-1Q) /CSM_Contig/Conti... 38 0.022
Contig-U10325-1 (Contig-U10325-1Q) /CSM_Contig/Conti... 38 0.022

>Contig-U08919-1 (Contig-U08919-1Q) /CSM_Contig/Contig-U08919-1Q.Seq.d
Length = 1212

Score = 2319 bits (1170), Expect = 0.0
Identities = 1212/1212 (100%)
Strand = Plus / Plus


Query: 1 ccacattaccaaatttaccaattccaggtggtgataaaatttcaaaatattgtagacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccacattaccaaatttaccaattccaggtggtgataaaatttcaaaatattgtagacata 60


Query: 61 ccaatatcacttgtacacaaccatcaaataataaatgtgtaatcactggttgttcaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccaatatcacttgtacacaaccatcaaataataaatgtgtaatcactggttgttcaaaag 120


Query: 121 ataccaatggtaaatgtgaagtaattggtaatttagaatgtgccgataaatctaaatatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ataccaatggtaaatgtgaagtaattggtaatttagaatgtgccgataaatctaaatatt 180


Query: 181 gtatgacgctaactggttgtgatccaaaacttggttgtcaatataaatcaaattgtattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtatgacgctaactggttgtgatccaaaacttggttgtcaatataaatcaaattgtattg 240


Query: 241 gtccatgtttaactggtgaatgtaataatggtaaatgtaccagcatggatgctgattatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtccatgtttaactggtgaatgtaataatggtaaatgtaccagcatggatgctgattatc 300


Query: 301 gttccaatgaattgggtgaagatccatgtaaaatttatagttgtaatgcaaagaatggtg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gttccaatgaattgggtgaagatccatgtaaaatttatagttgtaatgcaaagaatggtg 360


Query: 361 gttgtatggcaactccaaaatgtacttccccttcctcctccaatccatgtgttattccaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttgtatggcaactccaaaatgtacttccccttcctcctccaatccatgtgttattccaa 420


Query: 421 cttgctccgctgataaaggtgtttgtggtacatacactcaaaatagtacagaatgtaatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttgctccgctgataaaggtgtttgtggtacatacactcaaaatagtacagaatgtaatt 480


Query: 481 gtaattgtaaattaaacccatgtcaaaagaataactgtgatcaaagtgtaaatccaccnn 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtaattgtaaattaaacccatgtcaaaagaataactgtgatcaaagtgtaaatccaccnn 540


Query: 541 nnnnnnnncaatcgatatttgtgataaaaataactggtagtgttaaacatactccaatgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 nnnnnnnncaatcgatatttgtgataaaaataactggtagtgttaaacatactccaatgg 600


Query: 601 aatgttctggttgtaccaaatgtaataatggaaaatgtattccaattgaatccaattgtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aatgttctggttgtaccaaatgtaataatggaaaatgtattccaattgaatccaattgtg 660


Query: 661 atgatggtaatttatgtaccattgatcaatgtatgaacaatggtagttgtattcacacac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atgatggtaatttatgtaccattgatcaatgtatgaacaatggtagttgtattcacacac 720


Query: 721 ctctatcatgtaatatcaccaatccatgtatggattatacttgtaatgctgatattggct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ctctatcatgtaatatcaccaatccatgtatggattatacttgtaatgctgatattggct 780


Query: 781 gtgttggtgtaccaaaaatttgtccaaacaaaggtaattgtctaattggttattgtgatg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gtgttggtgtaccaaaaatttgtccaaacaaaggtaattgtctaattggttattgtgatg 840


Query: 841 ctggtgaatgtaaattaaaagatcgtatttgtgactcaccttcattttgtcaaatttctc 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ctggtgaatgtaaattaaaagatcgtatttgtgactcaccttcattttgtcaaatttctc 900


Query: 901 aatgttccgatgtgactggttgtattgttttcgataaagtttgtataccttcaaatccaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aatgttccgatgtgactggttgtattgttttcgataaagtttgtataccttcaaatccaa 960


Query: 961 aatgtgaaactggtgtttgtataaatgctacttcaactgaaccaggaagatgtgaatcgg 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aatgtgaaactggtgtttgtataaatgctacttcaactgaaccaggaagatgtgaatcgg 1020


Query: 1021 ttgattttgatccaaaaccttttgtttgtaaacccgctgcaatcatatcaacctctgtta 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ttgattttgatccaaaaccttttgtttgtaaacccgctgcaatcatatcaacctctgtta 1080


Query: 1081 ttgttggtgtttcagtcgctgctgctgtagttgccattgttattgtagttgcttctaaaa 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ttgttggtgtttcagtcgctgctgctgtagttgccattgttattgtagttgcttctaaaa 1140


Query: 1141 aaggttatgatgcatgggctgcttcaaataataattntncttgcatnctttaacttcaaa 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 aaggttatgatgcatgggctgcttcaaataataattntncttgcatnctttaacttcaaa 1200


Query: 1201 nccttatatgaa 1212
||||||||||||
Sbjct: 1201 nccttatatgaa 1212


>Contig-U14788-1 (Contig-U14788-1Q) /CSM_Contig/Contig-U14788-1Q.Seq.d
Length = 782

Score = 52.0 bits (26), Expect = 1e-06
Identities = 29/30 (96%)
Strand = Plus / Plus


Query: 657 tgtgatgatggtaatttatgtaccattgat 686
||||||||||||||||||||||| ||||||
Sbjct: 677 tgtgatgatggtaatttatgtacaattgat 706


Score = 30.2 bits (15), Expect = 5.3
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 657 tgtgatgatggtaat 671
|||||||||||||||
Sbjct: 461 tgtgatgatggtaat 475


Score = 30.2 bits (15), Expect = 5.3
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 657 tgtgatgatggtaat 671
|||||||||||||||
Sbjct: 533 tgtgatgatggtaat 547


>Contig-U13473-1 (Contig-U13473-1Q) /CSM_Contig/Contig-U13473-1Q.Seq.d
Length = 986

Score = 50.1 bits (25), Expect = 6e-06
Identities = 31/33 (93%)
Strand = Plus / Plus


Query: 654 aattgtgatgatggtaatttatgtaccattgat 686
||||||||||||||| |||||||||| ||||||
Sbjct: 912 aattgtgatgatggtgatttatgtacaattgat 944


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,059
Number of Sequences: 6905
Number of extensions: 16059
Number of successful extensions: 1798
Number of sequences better than 10.0: 203
length of query: 1212
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1196
effective length of database: 5,564,391
effective search space: 6655011636
effective search space used: 6655011636
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.13
Homology vs DNA
Query= Contig-U08919-1 (Contig-U08919-1Q) /CSM_Contig/Contig-U08919-1Q.Seq.d
(1212 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ374526) Dictyostelium discoideum cDNA clone:ddc8m07, 3' e... 1292 0.0 1
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 1193 0.0 3
(BJ360885) Dictyostelium discoideum cDNA clone:ddc8m07, 5' e... 1066 0.0 1
(BJ385330) Dictyostelium discoideum cDNA clone:ddc54i14, 3' ... 38 7e-06 4
(BJ385053) Dictyostelium discoideum cDNA clone:ddc51l15, 3' ... 38 7e-06 4
(BJ353472) Dictyostelium discoideum cDNA clone:dda50f08, 3' ... 38 7e-06 4
(BJ384310) Dictyostelium discoideum cDNA clone:ddc49b04, 3' ... 38 8e-06 4
(BJ384135) Dictyostelium discoideum cDNA clone:ddc48j12, 3' ... 38 8e-06 4
(BJ380050) Dictyostelium discoideum cDNA clone:ddc36h20, 3' ... 38 8e-06 4
(BJ355819) Dictyostelium discoideum cDNA clone:dda58f10, 3' ... 38 8e-06 4
(BJ348495) Dictyostelium discoideum cDNA clone:dda33m08, 3' ... 38 8e-06 4
(BJ384563) Dictyostelium discoideum cDNA clone:ddc49m21, 3' ... 38 8e-06 4
(BJ351345) Dictyostelium discoideum cDNA clone:dda42j22, 3' ... 38 8e-06 4
(BJ348687) Dictyostelium discoideum cDNA clone:dda34c04, 3' ... 38 8e-06 4
(BJ348065) Dictyostelium discoideum cDNA clone:dda32g03, 3' ... 38 8e-06 4
(BJ383287) Dictyostelium discoideum cDNA clone:ddc52b17, 3' ... 38 8e-06 4
(BJ349394) Dictyostelium discoideum cDNA clone:dda36i11, 3' ... 38 8e-06 4
(BJ406281) Dictyostelium discoideum cDNA clone:dds34b22, 3' ... 38 8e-06 4
(BJ358287) Dictyostelium discoideum cDNA clone:dda56k19, 3' ... 38 8e-06 4
(BJ406506) Dictyostelium discoideum cDNA clone:dds35b16, 3' ... 38 8e-06 4
(BJ350677) Dictyostelium discoideum cDNA clone:dda40m16, 3' ... 38 8e-06 4
(BJ348668) Dictyostelium discoideum cDNA clone:dda33o21, 3' ... 38 8e-06 4
(BJ385086) Dictyostelium discoideum cDNA clone:ddc51c23, 3' ... 38 8e-06 4
(BJ352208) Dictyostelium discoideum cDNA clone:dda46c04, 3' ... 38 8e-06 4
(BJ349083) Dictyostelium discoideum cDNA clone:dda35h07, 3' ... 38 8e-06 4
(BJ352533) Dictyostelium discoideum cDNA clone:dda47g01, 3' ... 38 8e-06 4
(BJ349944) Dictyostelium discoideum cDNA clone:dda38m02, 3' ... 38 8e-06 4
(BJ407085) Dictyostelium discoideum cDNA clone:dds37m12, 3' ... 38 9e-06 4
(BJ354673) Dictyostelium discoideum cDNA clone:dda54k09, 3' ... 38 9e-06 4
(BJ386470) Dictyostelium discoideum cDNA clone:ddc58i09, 3' ... 38 9e-06 4
(BJ356295) Dictyostelium discoideum cDNA clone:dda59j23, 3' ... 38 9e-06 4
(BJ380379) Dictyostelium discoideum cDNA clone:ddc38a04, 3' ... 38 9e-06 4
(BJ380604) Dictyostelium discoideum cDNA clone:ddc38p14, 3' ... 38 9e-06 4
(BJ378716) Dictyostelium discoideum cDNA clone:ddc32i17, 3' ... 38 9e-06 4
(BJ348419) Dictyostelium discoideum cDNA clone:dda33m02, 3' ... 38 9e-06 4
(BJ408680) Dictyostelium discoideum cDNA clone:dds46i15, 3' ... 38 9e-06 4
(BJ405868) Dictyostelium discoideum cDNA clone:dds33f12, 3' ... 38 9e-06 4
(BJ351135) Dictyostelium discoideum cDNA clone:dda42m02, 3' ... 38 9e-06 4
(BJ350912) Dictyostelium discoideum cDNA clone:dda41m07, 3' ... 38 9e-06 4
(BJ384714) Dictyostelium discoideum cDNA clone:ddc50p07, 3' ... 38 9e-06 4
(BJ382269) Dictyostelium discoideum cDNA clone:ddc44n02, 3' ... 38 9e-06 4
(BJ354650) Dictyostelium discoideum cDNA clone:dda54f09, 3' ... 38 9e-06 4
(BJ348679) Dictyostelium discoideum cDNA clone:dda34b01, 3' ... 38 9e-06 4
(BJ408272) Dictyostelium discoideum cDNA clone:dds45d09, 3' ... 38 9e-06 4
(BJ404613) Dictyostelium discoideum cDNA clone:dds29g06, 3' ... 38 9e-06 4
(BJ385529) Dictyostelium discoideum cDNA clone:ddc55c07, 3' ... 38 9e-06 4
(BJ403520) Dictyostelium discoideum cDNA clone:dds25l09, 3' ... 38 9e-06 4
(BJ379264) Dictyostelium discoideum cDNA clone:ddc34d10, 3' ... 38 9e-06 4
(BJ380656) Dictyostelium discoideum cDNA clone:ddc38j23, 3' ... 38 9e-06 4
(BJ404013) Dictyostelium discoideum cDNA clone:dds27d05, 3' ... 38 1e-05 4
(BJ348764) Dictyostelium discoideum cDNA clone:dda34e07, 3' ... 38 1e-05 4
(BJ406553) Dictyostelium discoideum cDNA clone:dds35l16, 3' ... 38 1e-05 4
(BJ354559) Dictyostelium discoideum cDNA clone:dda54c04, 3' ... 38 1e-05 4
(BJ383429) Dictyostelium discoideum cDNA clone:ddc53b02, 3' ... 38 1e-05 4
(BJ385616) Dictyostelium discoideum cDNA clone:ddc55e18, 3' ... 38 1e-05 4
(BJ355175) Dictyostelium discoideum cDNA clone:dda56a02, 3' ... 38 1e-05 4
(BJ386184) Dictyostelium discoideum cDNA clone:ddc57l10, 3' ... 38 1e-05 4
(BJ406084) Dictyostelium discoideum cDNA clone:dds34h05, 3' ... 38 1e-05 4
(BJ382732) Dictyostelium discoideum cDNA clone:ddc45o17, 3' ... 38 1e-05 4
(BJ404402) Dictyostelium discoideum cDNA clone:dds28l12, 3' ... 38 1e-05 4
(BJ354079) Dictyostelium discoideum cDNA clone:dda52o09, 3' ... 38 1e-05 4
(BJ346757) Dictyostelium discoideum cDNA clone:dda24n22, 3' ... 38 1e-05 4
(BJ382393) Dictyostelium discoideum cDNA clone:ddc44i13, 3' ... 38 1e-05 4
(BJ349397) Dictyostelium discoideum cDNA clone:dda36j08, 3' ... 38 1e-05 4
(BJ405503) Dictyostelium discoideum cDNA clone:dds31m20, 3' ... 38 1e-05 4
(BJ384648) Dictyostelium discoideum cDNA clone:ddc50a08, 3' ... 38 1e-05 4
(BJ351247) Dictyostelium discoideum cDNA clone:dda42f13, 3' ... 38 1e-05 4
(BJ380232) Dictyostelium discoideum cDNA clone:ddc37a15, 3' ... 38 1e-05 4
(BJ352714) Dictyostelium discoideum cDNA clone:dda47l18, 3' ... 38 1e-05 4
(BJ349785) Dictyostelium discoideum cDNA clone:dda37k15, 3' ... 38 1e-05 4
(BJ406461) Dictyostelium discoideum cDNA clone:dds35h07, 3' ... 38 1e-05 4
(BJ408007) Dictyostelium discoideum cDNA clone:dds44k08, 3' ... 38 1e-05 4
(BJ383099) Dictyostelium discoideum cDNA clone:ddc46i23, 3' ... 38 1e-05 4
(BJ358116) Dictyostelium discoideum cDNA clone:dda65e23, 3' ... 38 1e-05 4
(BJ348715) Dictyostelium discoideum cDNA clone:dda34j01, 3' ... 38 1e-05 4
(BJ384602) Dictyostelium discoideum cDNA clone:ddc50f02, 3' ... 38 1e-05 4
(BJ384279) Dictyostelium discoideum cDNA clone:ddc48k20, 3' ... 38 1e-05 4
(BJ376756) Dictyostelium discoideum cDNA clone:ddc29f21, 3' ... 38 1e-05 4
(BJ383490) Dictyostelium discoideum cDNA clone:ddc53p05, 3' ... 38 1e-05 4
(BJ379418) Dictyostelium discoideum cDNA clone:ddc34e22, 3' ... 38 1e-05 4
(BJ378707) Dictyostelium discoideum cDNA clone:ddc32g16, 3' ... 38 1e-05 4
(BJ379784) Dictyostelium discoideum cDNA clone:ddc36a02, 3' ... 38 1e-05 4
(BJ355057) Dictyostelium discoideum cDNA clone:dda55j17, 3' ... 38 1e-05 4
(BJ351991) Dictyostelium discoideum cDNA clone:dda45d09, 3' ... 38 1e-05 4
(BJ350735) Dictyostelium discoideum cDNA clone:dda40h24, 3' ... 38 1e-05 4
(BJ351162) Dictyostelium discoideum cDNA clone:dda42b12, 3' ... 38 1e-05 4
(BJ351155) Dictyostelium discoideum cDNA clone:dda42a09, 3' ... 38 1e-05 4
(BJ355946) Dictyostelium discoideum cDNA clone:dda58a24, 3' ... 38 1e-05 4
(BJ406773) Dictyostelium discoideum cDNA clone:dds36k11, 3' ... 38 1e-05 4
(BJ358125) Dictyostelium discoideum cDNA clone:dda65g24, 3' ... 38 1e-05 4
(BJ352934) Dictyostelium discoideum cDNA clone:dda48m09, 3' ... 38 1e-05 4
(BJ352536) Dictyostelium discoideum cDNA clone:dda47g05, 3' ... 38 1e-05 4
(BJ405533) Dictyostelium discoideum cDNA clone:dds32c01, 3' ... 38 1e-05 4
(BJ380628) Dictyostelium discoideum cDNA clone:ddc38e20, 3' ... 38 1e-05 4
(BJ404345) Dictyostelium discoideum cDNA clone:dds28a10, 3' ... 38 1e-05 4
(BJ401730) Dictyostelium discoideum cDNA clone:dds19p03, 3' ... 38 1e-05 4
(BJ384872) Dictyostelium discoideum cDNA clone:ddc51d05, 3' ... 38 1e-05 4
(BJ383893) Dictyostelium discoideum cDNA clone:ddc47h13, 3' ... 38 1e-05 4
(BJ355727) Dictyostelium discoideum cDNA clone:dda58c05, 3' ... 38 1e-05 4
(BJ355101) Dictyostelium discoideum cDNA clone:dda55b24, 3' ... 38 1e-05 4

>(BJ374526) Dictyostelium discoideum cDNA clone:ddc8m07, 3' end,
single read.
Length = 665

Score = 1292 bits (652), Expect = 0.0
Identities = 664/664 (100%)
Strand = Plus / Minus


Query: 549 caatcgatatttgtgataaaaataactggtagtgttaaacatactccaatggaatgttct 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 caatcgatatttgtgataaaaataactggtagtgttaaacatactccaatggaatgttct 606


Query: 609 ggttgtaccaaatgtaataatggaaaatgtattccaattgaatccaattgtgatgatggt 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ggttgtaccaaatgtaataatggaaaatgtattccaattgaatccaattgtgatgatggt 546


Query: 669 aatttatgtaccattgatcaatgtatgaacaatggtagttgtattcacacacctctatca 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aatttatgtaccattgatcaatgtatgaacaatggtagttgtattcacacacctctatca 486


Query: 729 tgtaatatcaccaatccatgtatggattatacttgtaatgctgatattggctgtgttggt 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tgtaatatcaccaatccatgtatggattatacttgtaatgctgatattggctgtgttggt 426


Query: 789 gtaccaaaaatttgtccaaacaaaggtaattgtctaattggttattgtgatgctggtgaa 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gtaccaaaaatttgtccaaacaaaggtaattgtctaattggttattgtgatgctggtgaa 366


Query: 849 tgtaaattaaaagatcgtatttgtgactcaccttcattttgtcaaatttctcaatgttcc 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tgtaaattaaaagatcgtatttgtgactcaccttcattttgtcaaatttctcaatgttcc 306


Query: 909 gatgtgactggttgtattgttttcgataaagtttgtataccttcaaatccaaaatgtgaa 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gatgtgactggttgtattgttttcgataaagtttgtataccttcaaatccaaaatgtgaa 246


Query: 969 actggtgtttgtataaatgctacttcaactgaaccaggaagatgtgaatcggttgatttt 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 actggtgtttgtataaatgctacttcaactgaaccaggaagatgtgaatcggttgatttt 186


Query: 1029 gatccaaaaccttttgtttgtaaacccgctgcaatcatatcaacctctgttattgttggt 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gatccaaaaccttttgtttgtaaacccgctgcaatcatatcaacctctgttattgttggt 126


Query: 1089 gtttcagtcgctgctgctgtagttgccattgttattgtagttgcttctaaaaaaggttat 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 gtttcagtcgctgctgctgtagttgccattgttattgtagttgcttctaaaaaaggttat 66


Query: 1149 gatgcatgggctgcttcaaataataattntncttgcatnctttaacttcaaanccttata 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gatgcatgggctgcttcaaataataattntncttgcatnctttaacttcaaanccttata 6


Query: 1209 tgaa 1212
||||
Sbjct: 5 tgaa 2

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,365,212,405
Number of extensions: 79475844
Number of successful extensions: 6026185
Number of sequences better than 10.0: 998
Length of query: 1212
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1188
Effective length of database: 97,308,875,965
Effective search space: 115602944646420
Effective search space used: 115602944646420
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.24
Homology vs Protein
Query= Contig-U08919-1 (Contig-U08919-1Q) /CSM_Contig/Contig-U08919-1Q.Seq.d
(1212 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q557E9) RecName: Full=Protein psiG; Flags: Precursor; &AC11568... 771 0.0
(Q86HT1) RecName: Full=Protein psiL; Flags: Precursor; &AC11695... 276 8e-73
(Q94494) RecName: Full=Protein psiH; Flags: Precursor; &U67940_... 271 4e-71
(Q54P69) RecName: Full=Protein psiM; Flags: Precursor; 246 1e-63
(Q54VS2) RecName: Full=Protein psiP; Flags: Precursor; 219 2e-55
(Q54G85) RecName: Full=Protein psiJ; Flags: Precursor; 150 1e-34
(P11976) RecName: Full=Prestalk protein; AltName: Full=Extracell... 138 3e-31
A26838(A26838)prestalk protein precursor - slime mold (Dictyoste... 138 3e-31
(Q54CH8) RecName: Full=Protein psiN; Flags: Precursor; 130 7e-29
A27020(A27020)DIF-induced prestalk pDd63 protein precursor - sli... 125 3e-27
S44208(S44208) extracellular matrix protein B - Dictyostelium mi... 122 3e-26
AC116984_103(AC116984|pid:none) Dictyostelium discoideum chromos... 111 6e-23
AC117072_61(AC117072|pid:none) Dictyostelium discoideum chromoso... 91 8e-17
(Q54C31) RecName: Full=Protein psiR; Flags: Precursor; 88 5e-16
(Q55FQ4) RecName: Full=Protein psiB; Flags: Precursor; 86 3e-15
(Q54C32) RecName: Full=Protein psiQ; Flags: Precursor; 80 2e-13
AB077047_1(AB077047|pid:none) Periplaneta americana VgR mRNA for... 78 7e-13
AY540953_1(AY540953|pid:none) Strongylocentrotus purpuratus prot... 73 2e-11
EU974210_1(EU974210|pid:none) Zea mays clone 442907 keratin-asso... 69 3e-10
(P35953) RecName: Full=Very low-density lipoprotein receptor; ... 66 2e-09
DQ096731_1(DQ096731|pid:none) Danio rerio tenascin-C (TNC) mRNA,... 66 3e-09
AP008215_740(AP008215|pid:none) Oryza sativa (japonica cultivar-... 65 4e-09
AP005419_8(AP005419|pid:none) Oryza sativa Japonica Group genomi... 65 4e-09
FJ501956_1(FJ501956|pid:none) Oryza sativa Indica Group keratin ... 65 4e-09
BC013622_1(BC013622|pid:none) Mus musculus very low density lipo... 65 6e-09
BT011327_1(BT011327|pid:none) Drosophila melanogaster SD22390 fu... 65 6e-09
(P98156) RecName: Full=Very low-density lipoprotein receptor; ... 65 6e-09
AC115598_37(AC115598|pid:none) Dictyostelium discoideum chromoso... 64 1e-08
AE014297_4237(AE014297|pid:none) Drosophila melanogaster chromos... 64 1e-08
L33417_1(L33417|pid:none) Mus musculus very low density lipoprot... 63 2e-08
CP000251_2747(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 63 2e-08
AY262832_1(AY262832|pid:none) Solenopsis invicta vitellogenin re... 62 3e-08
L22431_1(L22431|pid:none) Human very low density lipoprotein rec... 62 4e-08
BX510920_1(BX510920|pid:none) Zebrafish DNA sequence from clone ... 62 4e-08
AL450467_2(AL450467|pid:none) Human DNA sequence from clone RP11... 62 4e-08
(P98155) RecName: Full=Very low-density lipoprotein receptor; ... 62 4e-08
AB208822_1(AB208822|pid:none) Homo sapiens mRNA for Very low-den... 62 4e-08
AY027889_1(AY027889|pid:none) Aedes aegypti vitellogenin recepto... 62 5e-08
A35844(A35844)Xotch protein - African clawed frog 62 5e-08
(P21783) RecName: Full=Neurogenic locus notch protein homolog; ... 62 5e-08
AY805407_1(AY805407|pid:none) Danio rerio notch1b mRNA, complete... 61 7e-08
AK295878_1(AK295878|pid:none) Homo sapiens cDNA FLJ50970 complet... 61 7e-08
I48952(I48952;S48217) VLDL receptor precursor, long splice form ... 61 9e-08
(Q95209) RecName: Full=Sortilin-related receptor; AltName: Full=... 60 1e-07
(P20063) RecName: Full=Low-density lipoprotein receptor; ... 60 1e-07
AM050637_1(AM050637|pid:none) Blattella germanica mRNA for vitel... 60 2e-07
BC163556_1(BC163556|pid:none) Danio rerio tenascin C, mRNA (cDNA... 60 2e-07
CP000769_2860(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 60 2e-07
QRRTLD(S03430;S05076;B48908)LDL receptor precursor - rat 60 2e-07
(P98157) RecName: Full=Low-density lipoprotein receptor-related ... 60 2e-07
BX004856_1(BX004856|pid:none) Zebrafish DNA sequence from clone ... 59 3e-07
(Q80YX1) RecName: Full=Tenascin; Short=TN; AltName: Ful... 59 3e-07
(P35952) RecName: Full=Low-density lipoprotein receptor; ... 59 3e-07
AL732556_3(AL732556|pid:none) Mouse DNA sequence from clone RP24... 59 3e-07
AL732556_1(AL732556|pid:none) Mouse DNA sequence from clone RP24... 59 3e-07
L36118_1(L36118|pid:none) Chiloscyllium plagiosum low-density li... 59 3e-07
AY466854_1(AY466854|pid:none) Macaca mulatta low density lipopro... 59 3e-07
AB006906_1(AB006906|pid:none) Xenopus laevis mRNA for vitellogen... 59 3e-07
(P35555) RecName: Full=Fibrillin-1; Flags: Precursor; &L13923_1... 59 3e-07
X63556_1(X63556|pid:none) H.sapiens mRNA for fibrillin. 59 3e-07
CP000769_2725(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 59 3e-07
EU955480_1(EU955480|pid:none) Zea mays clone 1534022 unknown mRNA. 59 3e-07
AB177802_1(AB177802|pid:none) Homo sapiens FBN1 gene for fibrill... 59 3e-07
EU596506_1(EU596506|pid:none) Rattus norvegicus tenascin C (Tnc)... 59 4e-07
BC140725_1(BC140725|pid:none) Homo sapiens keratin associated pr... 58 6e-07
QRXLL2(B40388)LDL receptor 2 precursor - African clawed frog 58 6e-07
AM746676_4982(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 58 6e-07
AK170264_1(AK170264|pid:none) Mus musculus NOD-derived CD11c +ve... 58 8e-07
BC019207_1(BC019207|pid:none) Mus musculus low density lipoprote... 58 8e-07
AY892737_1(AY892737|pid:none) Synthetic construct Homo sapiens c... 57 1e-06
AB209409_1(AB209409|pid:none) Homo sapiens mRNA for low density ... 57 1e-06
AF016537_1(AF016537|pid:none) Bos taurus very low density lipopr... 57 1e-06
AB384938_1(AB384938|pid:none) Synthetic construct DNA, clone: pF... 57 1e-06
(P01130) RecName: Full=Low-density lipoprotein receptor; ... 57 1e-06
AY540956_1(AY540956|pid:none) Lytechinus variegatus soft fertili... 57 1e-06
(Q99088) RecName: Full=Low-density lipoprotein receptor 2; ... 57 1e-06
AF135059_1(AF135059|pid:none) Rattus norvegicus fibrillin-1 mRNA... 57 1e-06
AJ133651_1(AJ133651|pid:none) Trichoderma harzianum cmp1 gene. 57 1e-06
BT022830_1(BT022830|pid:none) Drosophila melanogaster IP13337 fu... 57 1e-06
AE014134_2533(AE014134|pid:none) Drosophila melanogaster chromos... 57 1e-06
AE014134_2532(AE014134|pid:none) Drosophila melanogaster chromos... 57 1e-06
T29764(T29764)hypothetical protein T21E3.3 - Caenorhabditis eleg... 57 2e-06
(Q99087) RecName: Full=Low-density lipoprotein receptor 1; ... 57 2e-06
T16840(T16840)hypothetical protein T10E10.4 - Caenorhabditis ele... 57 2e-06
QRXLL1(A40388)LDL receptor 1 precursor - African clawed frog 57 2e-06
AF217403_1(AF217403|pid:none) Homo sapiens low density lipoprote... 57 2e-06
AF067952_1(AF067952|pid:none) Sus scrofa low density lipoprotein... 57 2e-06
(Q28832) RecName: Full=Low-density lipoprotein receptor; ... 57 2e-06
U39644_2(U39644|pid:none) Caenorhabditis elegans cosmid T10E10, ... 57 2e-06
AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromoso... 56 2e-06
U28735_9(U28735|pid:none) Caenorhabditis elegans cosmid F48E3, c... 56 2e-06
(P35951) RecName: Full=Low-density lipoprotein receptor; ... 56 2e-06
AB076352_1(AB076352|pid:none) Homo sapiens KRTAP18.5 mRNA for ke... 56 2e-06
U28735_10(U28735|pid:none) Caenorhabditis elegans cosmid F48E3, ... 56 2e-06
L14815_1(L14815|pid:none) Entamoeba histolytica HM-1:IMSS galact... 56 2e-06
BC120950_1(BC120950|pid:none) Homo sapiens keratin associated pr... 56 3e-06
(P60370) RecName: Full=Keratin-associated protein 10-5; AltName:... 56 3e-06
BC170345_1(BC170345|pid:none) Xenopus laevis low density lipopro... 56 3e-06
AB100603_1(AB100603|pid:none) Mus musculus Notch1 gene for trans... 56 3e-06
AB100603_2(AB100603|pid:none) Mus musculus Notch1 gene for trans... 56 3e-06
AY265357_1(AY265357|pid:none) Homo sapiens glycoprotein receptor... 56 3e-06
AF508809_1(AF508809|pid:none) Mus musculus notch 1 protein mRNA,... 56 3e-06
CR760336_1(CR760336|pid:none) Xenopus tropicalis finished cDNA, ... 56 3e-06
AF369477_1(AF369477|pid:none) Mus musculus strain 129P3/J lipopr... 55 4e-06
AC116956_34(AC116956|pid:none) Dictyostelium discoideum chromoso... 55 4e-06
BC047187_1(BC047187|pid:none) Danio rerio very low density lipop... 55 4e-06
(P41951) RecName: Full=Prion-like-(Q/N-rich) domain-bearing prot... 55 4e-06
(Q91ZX7) RecName: Full=Prolow-density lipoprotein receptor-relat... 55 4e-06
AB095016_1(AB095016|pid:none) Cynops pyrrhogaster Notch-1 mRNA f... 55 4e-06
(Q01705) RecName: Full=Neurogenic locus notch homolog protein 1;... 55 4e-06
CP000113_5275(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 55 4e-06
AJ507290_1(AJ507290|pid:none) Cupiennius salei mRNA for Delta2 p... 55 4e-06
AY265358_1(AY265358|pid:none) Homo sapiens glycoprotein receptor... 55 5e-06
AK295090_1(AK295090|pid:none) Homo sapiens cDNA FLJ50960 complet... 55 5e-06
AY845260_1(AY845260|pid:none) Mytilus edulis clone 2 foot protei... 55 5e-06
AC007556_2(AC007556|pid:none) Homo sapiens BAC clone RP11-18C9 f... 55 5e-06
(P98164) RecName: Full=Low-density lipoprotein receptor-related ... 55 5e-06
(P98158) RecName: Full=Low-density lipoprotein receptor-related ... 55 5e-06
AF315556_1(AF315556|pid:none) Caenorhabditis remanei notch-like ... 55 6e-06
CP001131_2828(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 55 6e-06
DQ234084_1(DQ234084|pid:none) Paramecium tetraurelia A51 surface... 55 6e-06
A54105(A54105;S17063;S31101)fibrillin-2 precursor - human 55 6e-06
S25111(S25111;S32554) alpha-2-macroglobulin receptor precursor -... 55 6e-06
AK302589_1(AK302589|pid:none) Homo sapiens cDNA FLJ51150 complet... 55 6e-06
(Q61555) RecName: Full=Fibrillin-2; Flags: Precursor; &A57278(A... 55 6e-06
T28674(T28674) alpha-51D-immobilization antigen - Paramecium tet... 54 8e-06
AM746676_8749(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 54 8e-06
(Q1ZXC5) RecName: Full=Protein psiC; Flags: Precursor; 54 8e-06
S18188(S18188)notch protein homolog - rat 54 8e-06
AM746676_392(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 54 8e-06
AB287423_1(AB287423|pid:none) Entamoeba dispar igl1 mRNA for int... 54 8e-06
AB015790_1(AB015790|pid:none) Mus musculus mRNA for LR11, comple... 54 8e-06
AM746676_6052(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 54 1e-05
(O88307) RecName: Full=Sortilin-related receptor; AltName: Full=... 54 1e-05
CP000113_6723(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 54 1e-05
(A2ARV4) RecName: Full=Low-density lipoprotein receptor-related ... 54 1e-05
AK137635_1(AK137635|pid:none) Mus musculus adult female vagina c... 54 1e-05
EU024890_1(EU024890|pid:none) Penaeus monodon vitellogenin recep... 54 1e-05
AB076354_1(AB076354|pid:none) Homo sapiens KRTAP18.7 mRNA for ke... 54 1e-05
AL592545_3(AL592545|pid:none) Mouse DNA sequence from clone RP23... 54 1e-05
AK147303_1(AK147303|pid:none) Mus musculus adult male brain UNDE... 54 1e-05
AB031297_1(AB031297|pid:none) Sarcophaga peregrina mRNA for 120-... 53 2e-05
AE014298_418(AE014298|pid:none) Drosophila melanogaster chromoso... 53 2e-05
AE014298_423(AE014298|pid:none) Drosophila melanogaster chromoso... 53 2e-05
AE014298_417(AE014298|pid:none) Drosophila melanogaster chromoso... 53 2e-05
AE014298_420(AE014298|pid:none) Drosophila melanogaster chromoso... 53 2e-05
AY173045_1(AY173045|pid:none) Morone americana vitellogenin rece... 53 2e-05
FN357317_8(FN357317|pid:none) Schistosoma mansoni genome sequenc... 53 2e-05
AL138972_3(AL138972|pid:none) Drosophila melanogaster BAC clone ... 53 2e-05
AC008178_1(AC008178|pid:none) Homo sapiens BAC clone RP11-551O2 ... 53 2e-05
AE014298_419(AE014298|pid:none) Drosophila melanogaster chromoso... 53 2e-05
(P60409) RecName: Full=Keratin-associated protein 10-7; AltName:... 53 2e-05
AL773560_5(AL773560|pid:none) Pig DNA sequence from clone PigI-5... 53 2e-05
AC116963_25(AC116963|pid:none) Dictyostelium discoideum chromoso... 53 2e-05
AK154429_1(AK154429|pid:none) Mus musculus NOD-derived CD11c +ve... 53 2e-05
AB287420_1(AB287420|pid:none) Achaearanea tepidariorum At-Delta ... 53 2e-05
CP000113_6294(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 53 2e-05
AY218841_2(AY218841|pid:none) Danio rerio clone BUSM1-81J4 brahm... 53 2e-05
A30363(A30363)glycoprotein GP330, renal - rat (fragments) 52 3e-05
Z37983_6(Z37983|pid:none) Caenorhabditis elegans Cosmid B0393, c... 52 3e-05
EU072820_1(EU072820|pid:none) Drosophila americana isolate IR04.... 52 3e-05
EU972808_1(EU972808|pid:none) Zea mays clone 388422 unknown mRNA. 52 4e-05
AB209735_1(AB209735|pid:none) Homo sapiens mRNA for fibrillin 2 ... 52 4e-05
X08030_1(X08030|pid:none) Chicken mRNA fragment for tenascin (cT... 52 4e-05
DQ103506_1(DQ103506|pid:none) Dermacentor variabilis vitellogeni... 52 4e-05
EU072824_1(EU072824|pid:none) Drosophila americana isolate IR04.... 52 4e-05
(P35950) RecName: Full=Low-density lipoprotein receptor; ... 52 5e-05
AE014296_853(AE014296|pid:none) Drosophila melanogaster chromoso... 52 5e-05
(Q9NZR2) RecName: Full=Low-density lipoprotein receptor-related ... 52 5e-05
AB209707_1(AB209707|pid:none) Homo sapiens mRNA for low density ... 52 5e-05
(Q61554) RecName: Full=Fibrillin-1; Flags: Precursor; &A55624(A... 52 5e-05
AK049346_1(AK049346|pid:none) Mus musculus ES cells cDNA, RIKEN ... 52 5e-05
AF283408_1(AF283408|pid:none) Homo sapiens candidate tumor suppr... 52 5e-05
AC068195_1(AC068195|pid:none) Homo sapiens BAC clone RP11-114B24... 52 5e-05
AM746676_2058(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 52 5e-05
(Q54FD8) RecName: Full=Protein psiD; Flags: Precursor; 52 5e-05
Z98877_8(Z98877|pid:none) Caenorhabditis elegans YAC Y69H2, comp... 51 7e-05
(Q07954) RecName: Full=Prolow-density lipoprotein receptor-relat... 51 7e-05
U03272_1(U03272|pid:none) Human fibrillin-2 mRNA, complete cds. 51 7e-05
AJ005083_1(AJ005083|pid:none) Tribolium castaneum notch gene, pa... 51 7e-05
AK295005_1(AK295005|pid:none) Homo sapiens cDNA FLJ61253 complet... 51 7e-05
BC135385_1(BC135385|pid:none) Xenopus tropicalis hypothetical pr... 51 7e-05
AF007248_1(AF007248|pid:none) Mus musculus mutant fibrillin-1 (F... 51 9e-05
AB287424_1(AB287424|pid:none) Entamoeba dispar igl2 mRNA for int... 51 9e-05
AF308602_1(AF308602|pid:none) Homo sapiens NOTCH 1 (N1) mRNA, co... 51 9e-05
AB210365_1(AB210365|pid:none) Ciona intestinalis mRNA for delta ... 51 9e-05
AL844547_6(AL844547|pid:none) Mouse DNA sequence from clone RP23... 51 9e-05
(Q25464) RecName: Full=Adhesive plaque matrix protein 2; AltName... 50 1e-04
AF097183_1(AF097183|pid:none) Cryptosporidium parvum HC-10 gene,... 50 1e-04
M33753_1(M33753|pid:none) D.melanogaster crumbs protein mRNA, co... 50 1e-04
BC044262_1(BC044262|pid:none) Xenopus laevis similar to delta-li... 50 1e-04
BC149826_1(BC149826|pid:none) Bos taurus keratin associated prot... 50 1e-04
BC172642_1(BC172642|pid:none) Synthetic construct Mus musculus c... 50 1e-04
S00670(S00670;A26637) neurogenic repetitive locus delta protein ... 50 1e-04
(P10040) RecName: Full=Protein crumbs; AltName: Full=95F; Flags:... 50 1e-04
T30176(T30176) EGF repeat transmembrane protein - mouse &U57368... 50 1e-04
A31246(A31246)neurogenic protein Delta precursor - fruit fly (Dr... 50 1e-04
AF159157_1(AF159157|pid:none) Hydra vulgaris head-activator bind... 50 1e-04
AC004663_1(AC004663|pid:none) Homo sapiens chromosome 19, cosmid... 50 1e-04
AB209447_1(AB209447|pid:none) Homo sapiens mRNA for Notch homolo... 50 1e-04
AB363982_1(AB363982|pid:none) Tenebrio molitor mRNA for modular ... 50 1e-04
AF056116_15(AF056116|pid:none) Fugu rubripes serine/threonine ki... 50 1e-04
(P46530) RecName: Full=Neurogenic locus notch homolog protein 1;... 50 2e-04
AY437157_1(AY437157|pid:none) Drosophila melanogaster isolate so... 50 2e-04
(A8MXZ3) RecName: Full=Putative keratin-associated protein 9-2-l... 50 2e-04
(Q9UMG7) RecName: Full=Tenascin-X; Short=TN-X; AltName:... 50 2e-04
AB010266_2(AB010266|pid:none) Mus musculus Creb-rp, Tnx, Cyp21 g... 50 2e-04
AL049547_2(AL049547|pid:none) Human DNA sequence from clone RP1-... 50 2e-04
AL645922_24(AL645922|pid:none) Human DNA sequence from clone XXb... 50 2e-04
(A8MUX0) RecName: Full=Putative keratin-associated protein 10-li... 50 2e-04
U73710_1(U73710|pid:none) Entamoeba dispar Gal/GalNAc-inhibitabl... 50 2e-04
AL035436_2(AL035436|pid:none) Drosophila melanogaster cosmid clo... 50 2e-04
X71923_1(X71923|pid:none) H.sapiens XB gene for tenascin-X, exon... 50 2e-04
AK220196_1(AK220196|pid:none) Mus musculus mRNA for mKIAA4226 pr... 50 2e-04
AL805948_1(AL805948|pid:none) Mouse DNA sequence from clone RP23... 50 2e-04
X56160_1(X56160|pid:none) Human mRNA for tenascin. 50 2e-04
(Q9JI18) RecName: Full=Low-density lipoprotein receptor-related ... 50 2e-04
M16152_1(M16152|pid:none) Drosophila melanogaster Notch growth f... 50 2e-04
BC172946_1(BC172946|pid:none) Synthetic construct Mus musculus c... 50 2e-04
Y12539_1(Y12539|pid:none) Branchiostoma floridae mRNA for putati... 50 2e-04
U54641_1(U54641|pid:none) Chironomus thummi 220 kDa silk protein... 50 2e-04
AY437163_1(AY437163|pid:none) Drosophila melanogaster isolate so... 50 2e-04
AB210038_1(AB210038|pid:none) Homo sapiens mRNA for TNC variant ... 50 2e-04
AB209873_1(AB209873|pid:none) Homo sapiens mRNA for notch1 prepr... 50 2e-04
AB218869_1(AB218869|pid:none) Rhyparobia maderae LpR mRNA for Li... 50 2e-04
I46412(I46412;S34215) keratin KAP5.4 - sheep &X73434_1(X73434|p... 50 2e-04
AY437145_1(AY437145|pid:none) Drosophila melanogaster isolate so... 50 2e-04
AY437211_1(AY437211|pid:none) Drosophila melanogaster isolate so... 50 2e-04
(P24821) RecName: Full=Tenascin; Short=TN; AltName: Ful... 50 2e-04
(P46531) RecName: Full=Neurogenic locus notch homolog protein 1;... 50 2e-04
AY437205_1(AY437205|pid:none) Drosophila melanogaster isolate so... 50 2e-04
AJ291489_1(AJ291489|pid:none) Paracentrotus lividus mRNA for fib... 50 2e-04
AK304015_1(AK304015|pid:none) Homo sapiens cDNA FLJ60213 complet... 50 2e-04
AY437193_1(AY437193|pid:none) Drosophila melanogaster isolate so... 50 2e-04
AC115680_25(AC115680|pid:none) Dictyostelium discoideum chromoso... 49 3e-04
FJ039903_1(FJ039903|pid:none) Hordeum vulgare DEP1 (DEP1) mRNA, ... 49 3e-04
AM746676_3301(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 49 3e-04
AF508961_1(AF508961|pid:none) Xenopus laevis lipoprotein recepto... 49 3e-04
EU273942_1(EU273942|pid:none) Amphimedon queenslandica notch mRN... 49 3e-04
AY553633_1(AY553633|pid:none) Paramecium primaurelia surface ant... 49 3e-04
AF337950_1(AF337950|pid:none) Entamoeba histolytica Gal/GalNAc l... 49 3e-04
(Q9NS15) RecName: Full=Latent-transforming growth factor beta-bi... 49 4e-04
AK024477_1(AK024477|pid:none) Homo sapiens mRNA for FLJ00070 pro... 49 4e-04
AB209498_1(AB209498|pid:none) Homo sapiens mRNA for low density ... 49 4e-04
DQ900937_1(DQ900937|pid:none) Ciona intestinalis gamma-carboxygl... 49 4e-04
AM746676_2497(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 49 4e-04
AM920429_155(AM920429|pid:none) Penicillium chrysogenum Wisconsi... 49 4e-04
AK124524_1(AK124524|pid:none) Homo sapiens cDNA FLJ42533 fis, cl... 49 4e-04
AY995116_1(AY995116|pid:none) Strigamia maritima notch mRNA, par... 49 4e-04
AF135060_1(AF135060|pid:none) Rattus norvegicus fibrillin-2 mRNA... 49 4e-04
AK299351_1(AK299351|pid:none) Homo sapiens cDNA FLJ59398 complet... 49 4e-04
AB041857_1(AB041857|pid:none) Ciona intestinalis mRNA for Ci-MET... 49 5e-04
CT025750_1(CT025750|pid:none) Zebrafish DNA sequence from clone ... 49 5e-04
Y10354_1(Y10354|pid:none) D.rerio notch6 mRNA. 49 5e-04
X68794_1(X68794|pid:none) Drosophila melanogaster mRNA for type ... 49 5e-04
BC172899_1(BC172899|pid:none) Synthetic construct Homo sapiens c... 49 5e-04
BT033001_1(BT033001|pid:none) Drosophila melanogaster IP21817 fu... 49 5e-04
FJ222591_1(FJ222591|pid:none) Periplaneta americana Notch protei... 49 5e-04
BC136667_1(BC136667|pid:none) Homo sapiens low density lipoprote... 48 6e-04
U19972_1(U19972|pid:none) Mus musculus fibrillin-1 mRNA, partial... 48 6e-04
AB231861_1(AB231861|pid:none) Homo sapiens KIAA0816 mRNA for low... 48 6e-04
AM746676_6867(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 48 6e-04
AB084910_1(AB084910|pid:none) Homo sapiens LRP10 mRNA for low de... 48 6e-04
AB384531_1(AB384531|pid:none) Synthetic construct DNA, clone: pF... 48 6e-04
(Q04721) RecName: Full=Neurogenic locus notch homolog protein 2;... 48 6e-04
AF308601_1(AF308601|pid:none) Homo sapiens NOTCH 2 (N2) mRNA, co... 48 6e-04
AX357059_1(AX357059|pid:none) Sequence 21 from Patent EP1175909.... 48 6e-04
AE014298_1834(AE014298|pid:none) Drosophila melanogaster chromos... 48 8e-04
A49175(A49175;PH1570;S32113) Motch B protein - mouse (fragment) ... 48 8e-04
U13646_1(U13646|pid:none) Caenorhabditis elegans cosmid ZK783, c... 48 8e-04
(P46023) RecName: Full=G-protein coupled receptor GRL101; Flags:... 48 8e-04
AB001327_1(AB001327|pid:none) Halocynthia roretzi mRNA for HrNot... 48 8e-04
AM746676_6862(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 48 8e-04
AK054663_1(AK054663|pid:none) Homo sapiens cDNA FLJ30101 fis, cl... 48 8e-04
AF056359_1(AF056359|pid:none) Mus musculus tumor necrosis factor... 48 8e-04
T34513(T34513)hypothetical protein ZK783.1 - Caenorhabditis eleg... 48 8e-04
AK144161_1(AK144161|pid:none) Mus musculus RCB-0464 Meth-A cDNA,... 47 0.001
BC145270_1(BC145270|pid:none) Mus musculus a disintegrin and met... 47 0.001
AK296312_1(AK296312|pid:none) Homo sapiens cDNA FLJ50552 complet... 47 0.001
AY313175_1(AY313175|pid:none) Cricetulus griseus tumor necrosis ... 47 0.001
X62009_1(X62009|pid:none) Homo sapiens partial mRNA for fibrilli... 47 0.001
AK298571_1(AK298571|pid:none) Homo sapiens cDNA FLJ59733 complet... 47 0.001
AB174356_1(AB174356|pid:none) Macaca fascicularis brain cDNA clo... 47 0.001
AJ007365_1(AJ007365|pid:none) Mus musculus mRNA for TNF-alpha co... 47 0.001
AK137693_1(AK137693|pid:none) Mus musculus adult female vagina c... 47 0.001
BC138420_1(BC138420|pid:none) Mus musculus a disintegrin and met... 47 0.001
(O08999) RecName: Full=Latent-transforming growth factor beta-bi... 47 0.001
AK139471_1(AK139471|pid:none) Mus musculus 10 days neonate corte... 47 0.001
AF380348_1(AF380348|pid:none) Cricetulus griseus tumor necrosis ... 47 0.001
Y12004_1(Y12004|pid:none) M.musculus mRNA for receptor LR11/gp25... 47 0.001
A55035(A55035;S45034) cysteine-rich protein CRP1 - earthworm (En... 47 0.001
U57753_1(U57753|pid:none) Strongylocentrotus purpuratus SFE1 mRN... 47 0.001
BC138416_1(BC138416|pid:none) Mus musculus a disintegrin and met... 47 0.001
Z27078_4(Z27078|pid:none) Caenorhabditis elegans Cosmid K04H4, c... 47 0.001
Z27078_3(Z27078|pid:none) Caenorhabditis elegans Cosmid K04H4, c... 47 0.001
AY313173_1(AY313173|pid:none) Cricetulus griseus tumor necrosis ... 47 0.001
AC116960_61(AC116960|pid:none) Dictyostelium discoideum chromoso... 47 0.001
AL590997_30(AL590997|pid:none) Mouse DNA sequence from clone RP2... 47 0.001
U40030_4(U40030|pid:none) Caenorhabditis elegans cosmid T13C2, c... 47 0.001
AF514281_1(AF514281|pid:none) Oreochromis aureus vitellogenin re... 47 0.001
AF387318_1(AF387318|pid:none) Gallus gallus slit-3 mRNA, partial... 47 0.001
(P17053) RecName: Full=G surface protein, allelic form 168; Flag... 47 0.001
T25768(T25768)hypothetical protein F46F11.7 - Caenorhabditis ele... 47 0.001
BC151843_1(BC151843|pid:none) Homo sapiens tenascin C, mRNA (cDN... 47 0.001
AK047014_1(AK047014|pid:none) Mus musculus 10 days neonate cereb... 47 0.001
AL032657_4(AL032657|pid:none) Caenorhabditis elegans YAC Y47H9C,... 47 0.001
BC162468_1(BC162468|pid:none) Danio rerio jagged 1a, mRNA (cDNA ... 47 0.002
BC148222_1(BC148222|pid:none) Mus musculus cDNA clone IMAGE:4013... 47 0.002
EU854565_1(EU854565|pid:none) Danio rerio fibrillin 4 (fbn4) mRN... 47 0.002
T16408(T16408)hypothetical protein F48E3.9 - Caenorhabditis eleg... 47 0.002
AE014297_3999(AE014297|pid:none) Drosophila melanogaster chromos... 47 0.002
(P60410) RecName: Full=Keratin-associated protein 10-8; AltName:... 47 0.002
A23475(A23475)G surface protein - Paramecium primaurelia 47 0.002
AB255883_1(AB255883|pid:none) Rhyparobia maderae VgR mRNA for vi... 47 0.002
AF337951_1(AF337951|pid:none) Entamoeba histolytica Gal/GalNAc l... 47 0.002
AK295612_1(AK295612|pid:none) Homo sapiens cDNA FLJ54620 complet... 47 0.002
BC172897_1(BC172897|pid:none) Synthetic construct Homo sapiens c... 47 0.002
(Q8VI56) RecName: Full=Low-density lipoprotein receptor-related ... 46 0.002
EU441156_1(EU441156|pid:none) Patiria miniata delta protein mRNA... 46 0.002
AL845369_7(AL845369|pid:none) Zebrafish DNA sequence from clone ... 46 0.002
AJ879619_2(AJ879619|pid:none) Solea senegalensis mRNA for very l... 46 0.002
AJ879619_1(AJ879619|pid:none) Solea senegalensis mRNA for very l... 46 0.002
U69614_1(U69614|pid:none) Mus musculus TNF-alpha converting enzy... 46 0.002
AL691489_1(AL691489|pid:none) Mouse DNA sequence from clone RP23... 46 0.002
(Q9TU53) RecName: Full=Cubilin; Flags: Precursor; &AF137068_1(A... 46 0.002
CU138540_8(CU138540|pid:none) Zebrafish DNA sequence from clone ... 46 0.002
D87558_1(D87558|pid:none) Gallus gallus mRNA for C-Serrate-2, pa... 46 0.002
AF247637_1(AF247637|pid:none) Mus musculus LDLR dan mRNA, comple... 46 0.002
T13171(T13171) probable vitellogenin receptor - fruit fly (Droso... 46 0.002
CT033773_2(CT033773|pid:none) Mouse DNA sequence from clone RP23... 46 0.003
DQ462703_1(DQ462703|pid:none) Bos taurus low density lipoprotein... 46 0.003
(Q9Z1K9) RecName: Full=Disintegrin and metalloproteinase domain-... 46 0.003
AB299015_1(AB299015|pid:none) Haemaphysalis longicornis mRNA for... 46 0.003
(P26372) RecName: Full=Keratin, ultra high-sulfur matrix protein... 46 0.003
F87789(F87789) protein C34G6.2 [imported] - Caenorhabditis elega... 46 0.003
AE017349_30(AE017349|pid:none) Cryptococcus neoformans var. neof... 46 0.003
AK304737_1(AK304737|pid:none) Homo sapiens cDNA FLJ61597 partial... 46 0.003
(Q62220) RecName: Full=Keratin-associated protein 5-4; AltName: ... 46 0.003
AY901986_1(AY901986|pid:none) Xenopus laevis proprotein converta... 45 0.004
AY901987_1(AY901987|pid:none) Xenopus laevis proprotein converta... 45 0.004
AE014296_2190(AE014296|pid:none) Drosophila melanogaster chromos... 45 0.004
AY901988_1(AY901988|pid:none) Xenopus laevis proprotein converta... 45 0.004
AB126074_1(AB126074|pid:none) Homo sapiens KRTAP5-5 mRNA for ker... 45 0.004
BT011026_1(BT011026|pid:none) Drosophila melanogaster RE46519 fu... 45 0.004
(Q5M9B3) RecName: Full=Integrin beta-like protein 1; Flags: Prec... 45 0.004
U81825_1(U81825|pid:none) Pacifastacus leniusculus pacifastin li... 45 0.004
(Q5FC62) RecName: Full=Uncharacterized protein C35A5.10; &Z7118... 45 0.004
(O57409) RecName: Full=Delta-like protein B; Short=Delt... 45 0.004
AF283374_1(AF283374|pid:none) Homo sapiens candidate tumor suppr... 45 0.004
BC046744_1(BC046744|pid:none) Xenopus laevis Integrin beta-like ... 45 0.004
DQ917572_1(DQ917572|pid:none) Parhyale hawaiensis notch protein ... 45 0.005
AE014298_2386(AE014298|pid:none) Drosophila melanogaster chromos... 45 0.005
AE014297_4001(AE014297|pid:none) Drosophila melanogaster chromos... 45 0.005
AK290785_1(AK290785|pid:none) Homo sapiens cDNA FLJ77085 complet... 45 0.005
(O70244) RecName: Full=Cubilin; AltName: Full=Intrinsic factor-c... 45 0.005
(Q8WSW3) RecName: Full=Cadmium metallothionein; AltName: Full=MT... 45 0.005
(Q9W7R3) RecName: Full=Teneurin-4; Short=Ten-4; AltName... 45 0.005
AL591496_16(AL591496|pid:none) Mouse DNA sequence from clone RP2... 45 0.005
BT046152_1(BT046152|pid:none) Drosophila melanogaster IP21864 fu... 45 0.005
CP000113_1974(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 45 0.005
BC071037_1(BC071037|pid:none) Xenopus laevis hypothetical protei... 45 0.005
T22274(T22274)hypothetical protein F46B3.9 - Caenorhabditis eleg... 45 0.005
(Q968Z6) RecName: Full=Protein psiA; AltName: Full=Prespore-cell... 45 0.005
AE014297_4000(AE014297|pid:none) Drosophila melanogaster chromos... 45 0.005
AK029742_1(AK029742|pid:none) Mus musculus adult male testis cDN... 45 0.005
AL591496_15(AL591496|pid:none) Mouse DNA sequence from clone RP2... 45 0.005
DQ289584_1(DQ289584|pid:none) Spodoptera frugiperda integrin bet... 45 0.007
U89335_1(U89335|pid:none) Homo sapiens chromosome 6 notch4 (NOTC... 45 0.007
AE014134_2530(AE014134|pid:none) Drosophila melanogaster chromos... 45 0.007
BT011063_1(BT011063|pid:none) Drosophila melanogaster LD21010 fu... 45 0.007
U40030_3(U40030|pid:none) Caenorhabditis elegans cosmid T13C2, c... 45 0.007
AY061030_1(AY061030|pid:none) Drosophila melanogaster HL05736 fu... 45 0.007
(O88799) RecName: Full=Zonadhesin; Flags: Precursor; &T42215(T4... 45 0.007
AF003521_1(AF003521|pid:none) Homo sapiens Jagged 2 mRNA, comple... 45 0.007
AP009049_1701(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 45 0.007
X62008_1(X62008|pid:none) Homo sapiens partial mRNA for fibrilli... 45 0.007
(P49134) RecName: Full=Integrin beta-1; AltName: Full=Fibronecti... 45 0.007
AF501273_1(AF501273|pid:none) Entamoeba histolytica clone C1 Gal... 45 0.007
BC095744_1(BC095744|pid:none) Danio rerio integrin, beta-like 1,... 45 0.007
AE017347_137(AE017347|pid:none) Cryptococcus neoformans var. neo... 45 0.007
BX927239_21(BX927239|pid:none) Human DNA sequence from clone DAM... 45 0.007
AB023961_1(AB023961|pid:none) Homo sapiens NOTCH4 gene, exon 1 t... 45 0.007
AY901989_1(AY901989|pid:none) Xenopus laevis proprotein converta... 45 0.007
AF029778_1(AF029778|pid:none) Homo sapiens Jagged2 (JAG2) mRNA, ... 45 0.007
CR933878_21(CR933878|pid:none) Human DNA sequence from clone DAM... 45 0.007
(O35806) RecName: Full=Latent-transforming growth factor beta-bi... 45 0.007
AL662830_12(AL662830|pid:none) Human DNA sequence from clone XXb... 45 0.007
AE014297_4008(AE014297|pid:none) Drosophila melanogaster chromos... 45 0.007
U35363_1(U35363|pid:none) Bos taurus latent TGF-beta binding pro... 45 0.007
AL807754_1(AL807754|pid:none) Zebrafish DNA sequence from clone ... 45 0.007
AF499438_1(AF499438|pid:none) Caenorhabditis briggsae notch-like... 44 0.009
DQ482581_1(DQ482581|pid:none) Galleria mellonella lipophorin rec... 44 0.009
AK066765_1(AK066765|pid:none) Oryza sativa Japonica Group cDNA c... 44 0.009
T23682(T23682) hypothetical protein M02G9.3 - Caenorhabditis ele... 44 0.009
X15202_1(X15202|pid:none) Mouse mRNA for fibronectin receptor be... 44 0.009
AL110498_8(AL110498|pid:none) Caenorhabditis elegans YAC Y64G10A... 44 0.009
BC050675_1(BC050675|pid:none) Homo sapiens cysteine-rich with EG... 44 0.009
(P09055) RecName: Full=Integrin beta-1; AltName: Full=Fibronecti... 44 0.009
AK088729_1(AK088729|pid:none) Mus musculus 2 days neonate thymus... 44 0.009
L33861_1(L33861|pid:none) Sea urchin fibropellin Ia mRNA, 3' end. 44 0.009
AB220440_1(AB220440|pid:none) Macaca fascicularis mRNA, clone Qc... 44 0.009
AF029779_1(AF029779|pid:none) Homo sapiens hJAG2.del-E6 (JAG2) m... 44 0.009
AM746676_988(AM746676|pid:none) Sorangium cellulosum 'So ce 56' ... 44 0.009
AK159689_1(AK159689|pid:none) Mus musculus osteoclast-like cell ... 44 0.009
AF020201_1(AF020201|pid:none) Homo sapiens Jagged 2 mRNA, comple... 44 0.009
AB073427_1(AB073427|pid:none) Ciona savignyi mRNA for Delta, com... 44 0.009
(P13508) RecName: Full=Protein glp-1; Flags: Precursor; &A32901... 44 0.009
CR352252_1(CR352252|pid:none) Zebrafish DNA sequence from clone ... 44 0.009
AM746676_1800(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 44 0.011
AY142126_1(AY142126|pid:none) Giardia intestinalis isolate WB cl... 44 0.011
AC080162_4(AC080162|pid:none) Homo sapiens BAC clone RP11-400L8 ... 44 0.011
AL807828_3(AL807828|pid:none) Mouse DNA sequence from clone RP23... 44 0.011
U92649_1(U92649|pid:none) Homo sapiens snake venom-like protease... 44 0.011
AY630342_1(AY630342|pid:none) Manduca sexta plasmatocyte-specifi... 44 0.011
DQ470680_1(DQ470680|pid:none) Homo sapiens CRELD2-zeta (CRELD2) ... 44 0.011
DQ786775_1(DQ786775|pid:none) Mus musculus FEX2 mRNA, complete c... 44 0.011
AF033584_1(AF033584|pid:none) Giardia intestinalis variant-speci... 44 0.011
(P78536) RecName: Full=Disintegrin and metalloproteinase domain-... 44 0.011
FN357618_12(FN357618|pid:none) Schistosoma mansoni genome sequen... 44 0.011
AB210518_1(AB210518|pid:none) Ciona intestinalis mRNA for jagged... 44 0.015
EU152252_1(EU152252|pid:none) Hydra vulgaris notch mRNA, complet... 44 0.015
BT029727_1(BT029727|pid:none) Drosophila melanogaster IP17596 fu... 44 0.015
U31961_14(U31961|pid:none) Drosophila melanogaster bithorax comp... 44 0.015
A56136(A56136)jagged protein precursor - rat 44 0.015
CR933353_1(CR933353|pid:none) Mini antigen, Paramecium tetraurel... 44 0.015
AF184615_1(AF184615|pid:none) Branchiostoma californiense propro... 44 0.015
AK095875_1(AK095875|pid:none) Homo sapiens cDNA FLJ38556 fis, cl... 44 0.015
AM403063_1(AM403063|pid:none) Blattella germanica mRNA for lipop... 44 0.015
U20217_1(U20217|pid:none) Mus musculus fibrillin-2 mRNA, partial... 44 0.015
(P41990) RecName: Full=Anterior pharynx in excess protein 1; Fla... 44 0.015
AM403064_1(AM403064|pid:none) Blattella germanica mRNA for lipop... 44 0.015
U88173_9(U88173|pid:none) Caenorhabditis elegans cosmid F46F11, ... 44 0.015
D88991(D88991)protein apx-1 [imported] - Caenorhabditis elegans 44 0.015
AF461685_1(AF461685|pid:none) Mus musculus Jedi-736 protein mRNA... 44 0.015
FN357327_12(FN357327|pid:none) Schistosoma mansoni genome sequen... 44 0.015
AF444274_1(AF444274|pid:none) Mus musculus Jedi protein mRNA, co... 44 0.015
(Q9QXX0) RecName: Full=Protein jagged-1; Short=Jagged1;... 44 0.015
BT066452_1(BT066452|pid:none) Zea mays full-length cDNA clone ZM... 44 0.015
BC084572_1(BC084572|pid:none) Homo sapiens Notch homolog 2 (Dros... 43 0.020
BT066663_1(BT066663|pid:none) Zea mays full-length cDNA clone ZM... 43 0.020
AF074902_1(AF074902|pid:none) Caenorhabditis elegans laminin alp... 43 0.020
BC131611_1(BC131611|pid:none) Homo sapiens keratin associated pr... 43 0.020
EF125736_1(EF125736|pid:none) Nyctotherus ovalis hypothetical pr... 43 0.020
BC119785_1(BC119785|pid:none) Mus musculus latent transforming g... 43 0.020
(P60014) RecName: Full=Keratin-associated protein 10-10; AltName... 43 0.020
JN0786(JN0786)integrin beta-4 chain precursor - mouse 43 0.020
(Q8VIK5) RecName: Full=Platelet endothelial aggregation receptor... 43 0.020
F87908(F87908;E87908) protein T22A3.8 [imported] - Caenorhabditi... 43 0.020
AL607108_2(AL607108|pid:none) Mouse DNA sequence from clone RP23... 43 0.026
AE014297_4006(AE014297|pid:none) Drosophila melanogaster chromos... 43 0.026
(Q9BQ66) RecName: Full=Keratin-associated protein 4-12; AltName:... 43 0.026
(Q66PY1) RecName: Full=Signal peptide, CUB and EGF-like domain-c... 43 0.026
AF288451_1(AF288451|pid:none) Xenopus laevis LTBP-1S protein mRN... 43 0.026
BC079849_1(BC079849|pid:none) Mus musculus signal peptide, CUB d... 43 0.026
AY142135_1(AY142135|pid:none) Giardia intestinalis isolate WB cl... 43 0.026
(P60331) RecName: Full=Keratin-associated protein 10-1; AltName:... 43 0.026
AE014297_4009(AE014297|pid:none) Drosophila melanogaster chromos... 43 0.026
AY581198_1(AY581198|pid:none) Bos taurus integrin beta 5 (ITGB5)... 43 0.026
AL607108_4(AL607108|pid:none) Mouse DNA sequence from clone RP23... 43 0.026
Z98877_10(Z98877|pid:none) Caenorhabditis elegans YAC Y69H2, com... 43 0.026
CP000099_1162(CP000099|pid:none) Methanosarcina barkeri str. Fus... 43 0.026
AF448145_3(AF448145|pid:none) Myxococcus xanthus che3 chemosenso... 43 0.026
Y14330_1(Y14330|pid:none) Homo sapiens partial mRNA for jagged2 ... 43 0.026
AK302554_1(AK302554|pid:none) Homo sapiens cDNA FLJ51576 complet... 42 0.033
BX883044_5(BX883044|pid:none) Rattus norvegicus chromosome 20, m... 42 0.033
S82451_1(S82451|pid:none) latent transforming growth factor-beta... 42 0.033
S28291(S28291)hypothetical protein ZC84.1 - Caenorhabditis elegans 42 0.033
(Q701N2) RecName: Full=Keratin-associated protein 5-5; AltName: ... 42 0.033
(A8MX34) RecName: Full=Putative keratin-associated protein 10-li... 42 0.033
(P78504) RecName: Full=Protein jagged-1; Short=Jagged1;... 42 0.033
AK312722_1(AK312722|pid:none) Homo sapiens cDNA, FLJ93126, highl... 42 0.033
AF230275_1(AF230275|pid:none) Giardia intestinalis isolate Ad-1 ... 42 0.033
T16246(T16246)hypothetical protein F35A5.4 - Caenorhabditis eleg... 42 0.033
AJ295695_1(AJ295695|pid:none) Homo sapiens mRNA for stabilin-2 (... 42 0.033
AF492700_1(AF492700|pid:none) Caenorhabditis elegans strain DR13... 42 0.033
DQ314737_1(DQ314737|pid:none) Danio rerio crumbs-like protein 2b... 42 0.033
AL590992_2(AL590992|pid:none) Mouse DNA sequence from clone RP23... 42 0.033
BC078659_1(BC078659|pid:none) Homo sapiens latent transforming g... 42 0.033
U61276_1(U61276|pid:none) Human transmembrane protein Jagged 1 (... 42 0.033
AB209865_1(AB209865|pid:none) Homo sapiens mRNA for latent trans... 42 0.033
BC098393_1(BC098393|pid:none) Homo sapiens jagged 1 (Alagille sy... 42 0.033
AB052958_1(AB052958|pid:none) Homo sapiens mRNA for FELE-2, comp... 42 0.033
(Q8WWQ8) RecName: Full=Stabilin-2; AltName: Full=Fasciclin, EGF-... 42 0.033
FJ664126_1(FJ664126|pid:none) Tetrahymena tropicalis copper-indu... 42 0.044
(Q6L8H2) RecName: Full=Keratin-associated protein 5-3; AltName: ... 42 0.044
AY142131_1(AY142131|pid:none) Giardia intestinalis isolate WB cl... 42 0.044
AJ003118_1(AJ003118|pid:none) Oncorhynchus mykiss mRNA for somat... 42 0.044
AF468059_1(AF468059|pid:none) Bos taurus integrin beta 5 subunit... 42 0.044
AJ507288_1(AJ507288|pid:none) Cupiennius salei partial mRNA for ... 42 0.044
DQ871216_1(DQ871216|pid:none) Bos taurus integrin beta 5 mRNA, c... 42 0.044
AY142129_1(AY142129|pid:none) Giardia intestinalis isolate WB cl... 42 0.044
AB201466_1(AB201466|pid:none) Holotrichia diomphalia EGF-like mR... 42 0.044
AK074051_1(AK074051|pid:none) Homo sapiens mRNA for FLJ00122 pro... 42 0.044
AJ536342_1(AJ536342|pid:none) Glomeris marginata partial mRNA fo... 42 0.044
CR940348_368(CR940348|pid:none) Theileria annulata strain Ankara... 42 0.044
AY128478_1(AY128478|pid:none) Drosophila melanogaster RE42104 fu... 42 0.044
AM270078_56(AM270078|pid:none) Aspergillus niger contig An04c017... 42 0.044
(P60412) RecName: Full=Keratin-associated protein 10-11; AltName... 42 0.044
BT001632_1(BT001632|pid:none) Drosophila melanogaster RE38584 fu... 42 0.044
AL592307_1(AL592307|pid:none) Human DNA sequence from clone RP11... 42 0.057

>(Q557E9) RecName: Full=Protein psiG; Flags: Precursor;
&AC115684_22(AC115684|pid:none)
Length = 706

Score = 771 bits (1992), Expect = 0.0
Identities = 356/408 (87%), Positives = 356/408 (87%), Gaps = 13/408 (3%)
Frame = +3

Query: 6 LPNLPIPGGDKISKYCRHTNITCTQPSNNKCVITGCSKDTNGKCEVIGNLECADKSKYCM 185
LPNLPIPGGDKISKYCRHTNITCTQPSNNKCVITGCSKDTNGKCEVIGNLECADKSKYCM
Sbjct: 277 LPNLPIPGGDKISKYCRHTNITCTQPSNNKCVITGCSKDTNGKCEVIGNLECADKSKYCM 336

Query: 186 TLTGCDPKLGCQYKSNCIGPCLTGECNNGKCTSMDADYRSNELGEDPCKIYSCNAKNGGC 365
TLTGCDPKLGCQYKSNCIGPCLTGECNNGKCTSMDADY SNELGEDPCKIYSCNAKNGGC
Sbjct: 337 TLTGCDPKLGCQYKSNCIGPCLTGECNNGKCTSMDADYCSNELGEDPCKIYSCNAKNGGC 396

Query: 366 MATPKCTSPSSSNPCVIPTCSADKGVCGTYTQNSTECNCNCKLNPCQKNNCDQSVNPPXX 545
MATPKCTSPSSSNPCVIPTCSADKGVCGTYTQNSTECNCNCKLNPCQKNNCDQSVNPP
Sbjct: 397 MATPKCTSPSSSNPCVIPTCSADKGVCGTYTQNSTECNCNCKLNPCQKNNCDQSVNPPVC 456

Query: 546 XQ-SIFVI------------KITGSVKHTPMECSGCTKCNNGKCIPIESNCDDGNLCTID 686
I I KITGSVKHTPMECSGCTKCNNGKCIPIESNCDDGNLCTID
Sbjct: 457 SPLPIDTIDDGNPCTIDICDKITGSVKHTPMECSGCTKCNNGKCIPIESNCDDGNLCTID 516

Query: 687 QCMNNGSCIHTPLSCNITNPCMDYTCNADIGCVGVPKICPNKGNCLIGYCDAGECKLKDR 866
QCMNNGSCIHTPLSCNITNPCMDYTCNADIGCVGVPKICPNKGNCLIGYCDAGECKLKDR
Sbjct: 517 QCMNNGSCIHTPLSCNITNPCMDYTCNADIGCVGVPKICPNKGNCLIGYCDAGECKLKDR 576

Query: 867 ICDSPSFCQISQCSDVTGCIVFDKVCIPSNPKCETGVCINATSTEPGRCESVDFDPKPFV 1046
ICDSPSFCQISQCSDVTGCIVFDKVCIPSNPKCETGVCINATSTEPGRCESVDFDPKPFV
Sbjct: 577 ICDSPSFCQISQCSDVTGCIVFDKVCIPSNPKCETGVCINATSTEPGRCESVDFDPKPFV 636

Query: 1047 CKPXXXXXXXXXXXXXXXXXXXXXXXXXXXKKGYDAWAASNNNXXCXL 1190
CKP KKGYDAWAASNNN L
Sbjct: 637 CKPAAIISTSVIVGVSVAAAVVAIAIVVASKKGYDAWAASNNNSLASL 684

Score = 43.1 bits (100), Expect = 0.020
Identities = 56/213 (26%), Positives = 76/213 (35%), Gaps = 64/213 (30%)
Frame = +3

Query: 609 GCTKCNNGKCIPIESNCDDGNLCTIDQC------MNNGS-----CIHTPLSCN--ITNPC 749
G T CN + +CDD + CTID C + G C HT ++C N C
Sbjct: 254 GSTCCNK------DLDCDDDDPCTIDSCPLPNLPIPGGDKISKYCRHTNITCTQPSNNKC 307

Query: 750 MDYTCNAD----------IGCVGVPKICPNK----------------GNCLIGYCDAGEC 851
+ C+ D + C K C G CL G C+ G+C
Sbjct: 308 VITGCSKDTNGKCEVIGNLECADKSKYCMTLTGCDPKLGCQYKSNCIGPCLTGECNNGKC 367

Query: 852 KLKD------RICDSPSFCQISQCSDVT-GCIVFDKVCIPSN------PKC--ETGVCIN 986
D + + P C+I C+ GC+ K PS+ P C + GVC
Sbjct: 368 TSMDADYCSNELGEDP--CKIYSCNAKNGGCMATPKCTSPSSSNPCVIPTCSADKGVCGT 425

Query: 987 AT--STE--------PGRCESVDFDPKPFVCKP 1055
T STE P + + D P VC P
Sbjct: 426 YTQNSTECNCNCKLNPCQKNNCDQSVNPPVCSP 458

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,096,094,160
Number of extensions: 47799152
Number of successful extensions: 150995
Number of sequences better than 10.0: 1270
Number of HSP's gapped: 145042
Number of HSP's successfully gapped: 2444
Length of query: 404
Length of database: 1,040,966,779
Length adjustment: 131
Effective length of query: 273
Effective length of database: 621,205,444
Effective search space: 169589086212
Effective search space used: 169589086212
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.31 alm: 0.11 top: 0.60 tms: 0.07 mit: 0.25 mip: 0.04
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.33 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 1.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

24.0 %: cytoplasmic
16.0 %: nuclear
16.0 %: vesicles of secretory system
8.0 %: Golgi
8.0 %: endoplasmic reticulum
8.0 %: mitochondrial
8.0 %: plasma membrane
4.0 %: extracellular, including cell wall
4.0 %: cytoskeletal
4.0 %: vacuolar

>> prediction for Contig-U08919-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0