Contig-U08900-1
Contig ID Contig-U08900-1
Contig update 2002. 9.13
Contig sequence
>Contig-U08900-1 (Contig-U08900-1Q) /CSM_Contig/Contig-U08900-1Q.Seq.d
TAAAGAGAGAATGGCATGAATTAGTTGAAACATGTAATAGAGATATATTT
GGTAATAAAGAATTTAGAAATTTACAAATTGAAGCTATAAATTCAATTTT
ACATGATAGGGATACATTTGTAAGTTTACCAACTGGTGGCGGTAAGAGTT
TGTGTTTTCAAATTCCATCAATCGTTGATCATAGAGGTGTGACATTTGTA
ATATCACCATTGTTGGCATTGATGCAGGATCAAGTGCACAAATTGAAATC
ATTGGGTATTCCCGCAGAGTCAATCAATAGTTCGGGTAGTCAGCGTGAGA
ATAGGGATGTTTTAGACCAATTATTAAATGGTGAAACTTGTAAATTGAAA
TTAATTTATATTACACCTGAAAGATTGGCACAATCTGAATTCTTGCATTT
GTTAGACCAATTGTACGACCAAGGTAGGTTGAGAAGATTAGTGGTGGACG
AAGCTCATTGTATCTCTGAATGGGGCCACAGTTTCAGGCCAAAGTACAGA
CTAATTTCCACATTTCGTGATCGATTCCCCTCTGTACCGATATCGGCATT
CACTGCTAGTGCAACGTCAAATGTTGAAATTGATATTAAAAACTCACTAA
AAATGGTTAACCCAATTACAATCAATTCAAGTTTTCTCCGACCAAATTTA
CTATAC----------ATTTTTATCATGCTAAACTCAGTAATACTCAACG
TTCGAAATTACAAAAAGATTGGACCAATGGTGAATTTAAAATAGTTTGTA
CAACAATTGCATTTGGTATGGGTATTGATAAAGGTGATACAAGATTCGTC
ATTCATCATTCAATGCCTCAATCAATGGAATCCTATTATCAACAAACTGG
TAGAGCTGGTAGAGATGGTAAACATAGTGATTGTTTATTATTTTATAATA
AATCTGATTTAATGAGATTTAAACATATAATATCTCTTAATCAACCAAAA
GATCCATTCAATGCTTTTAGTAATTATAATGGTGTTGGTATTGGTGATAT
TGGTGGTGAACATTTAATATTAGATAATGATGGTAATTATATTAGCAATT
ATTCATCAGATGAATCTCAATATATGGATACTATTAAAAATAAAATTCAA
CAAACATCCACAAAACTTGAAATGTTGGACAGTGTTGCTTCATTTTGCTC
AACTCAATCGAAATGTCGTCGTGTAACTTTATTAAATTATTTTGGTGAAA
ACTCAAAATCTTGTGGAAATATGTGTGATATTTGTATTTCAAATTCAAAT
TCAAATTCAAATAATAGATCAAAAGCAAAACAAAATCAAATCGATTACTC
TGAAAGAATTTATAATAGAAATTCTATTCAATTTCATCTTTAAAAACAAA
AAAAGAAATCAC

Gap gap included
Contig length 1352
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 1386531
End point 1387887
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 2
Link to clone list U08900
List of clone(s)

est1=CFB294F,1,657
est2=CFB294Z,658,1354
Translated Amino Acid sequence
KREWHELVETCNRDIFGNKEFRNLQIEAINSILHDRDTFVSLPTGGGKSLCFQIPSIVDH
RGVTFVISPLLALMQDQVHKLKSLGIPAESINSSGSQRENRDVLDQLLNGETCKLKLIYI
TPERLAQSEFLHLLDQLYDQGRLRRLVVDEAHCISEWGHSFRPKYRLISTFRDRFPSVPI
SAFTASATSNVEIDIKNSLKMVNPITINSSFLRPNLLY---

---FYHAKLSNTQRSKLQKDWTNGEFKIVCTTIAFGMGIDKGDTRFVIHHSMPQSMESYY
QQTGRAGRDGKHSDCLLFYNKSDLMRFKHIISLNQPKDPFNAFSNYNGVGIGDIGGEHLI
LDNDGNYISNYSSDESQYMDTIKNKIQQTSTKLEMLDSVASFCSTQSKCRRVTLLNYFGE
NSKSCGNMCDICISNSNSNSNNRSKAKQNQIDYSERIYNRNSIQFHL*kqkkks


Translated Amino Acid sequence (All Frames)
Frame A:
*rengmn*lkhvieiylviknleiyklkl*iqfymigihl*vyqlvavrvcvfkfhqsli
iev*hl*yhhcwh*crikctn*nhwvfpqsqsivrvvsvrigmf*tny*mvklvn*n*fi
lhlkdwhnlnscic*tncttkvg*ed*wwtklivslngatvsgqstd*fphfvidsplyr
yrhsllvqrqmlklilkth*kwltqlqsiqvfsdqiyy---

---ifimlnsvilnvrnykkigpmvnlk*fvqqlhlvwvlikviqdssfiiqclnqwnpi
inklvelvemvnivivyyfiinli**dlni*yllinqkihsmllviimvlvlvilvvni*
y*immviilaiihqmnlniwillkikfnkhpqnlkcwtvllhfaqlnrnvvv*ly*iilv
ktqnlveicvifvfqiqiqiqiidqkqnkiksitlkefiieilfnfifknkkrnh

Frame B:
kerma*is*nm**ryiw**ri*kftn*sykfnft**gyickftnwwr*efvfsnsinr*s
*rcdicnitivgidagssaqieiigysrrvnq*fg*sa*e*gcfrpiikw*nl*ieinly
yt*kigti*ilafvrpivrpr*vekisggrsslyl*mgpqfqakvqtnfhis*siplctd
igihc*cnvkc*n*y*kltkng*pnynqfkfsptkfti---

---flsc*tq*ystfeitkrldqw*i*nslynnciwygy**r*ykirhssfnasingill
stnw*sw*rw*t**lfiil**i*fnei*tynis*stkrsiqcf**l*wcwyw*yww*tfn
ir**w*ly*qlfir*isiygyy*k*nstnihkt*nvgqccfillnsiemsscnfiklfw*
klkilwkyv*ylyfkfkfkfk**iksktksnrll*knl**kfysisslktkkei

Frame C:
KREWHELVETCNRDIFGNKEFRNLQIEAINSILHDRDTFVSLPTGGGKSLCFQIPSIVDH
RGVTFVISPLLALMQDQVHKLKSLGIPAESINSSGSQRENRDVLDQLLNGETCKLKLIYI
TPERLAQSEFLHLLDQLYDQGRLRRLVVDEAHCISEWGHSFRPKYRLISTFRDRFPSVPI
SAFTASATSNVEIDIKNSLKMVNPITINSSFLRPNLLY---

---FYHAKLSNTQRSKLQKDWTNGEFKIVCTTIAFGMGIDKGDTRFVIHHSMPQSMESYY
QQTGRAGRDGKHSDCLLFYNKSDLMRFKHIISLNQPKDPFNAFSNYNGVGIGDIGGEHLI
LDNDGNYISNYSSDESQYMDTIKNKIQQTSTKLEMLDSVASFCSTQSKCRRVTLLNYFGE
NSKSCGNMCDICISNSNSNSNNRSKAKQNQIDYSERIYNRNSIQFHL*kqkkks

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U08900-1 (Contig-U08900-1Q)
/CSM_Contig/Contig-U08900-1Q.Seq.d
(1362 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U08900-1 (Contig-U08900-1Q) /CSM_Contig/Conti... 2599 0.0
Contig-U09358-1 (Contig-U09358-1Q) /CSM_Contig/Conti... 54 4e-07
Contig-U04427-1 (Contig-U04427-1Q) /CSM_Contig/Conti... 54 4e-07
Contig-U12716-1 (Contig-U12716-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U05003-1 (Contig-U05003-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U11864-1 (Contig-U11864-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U09174-1 (Contig-U09174-1Q) /CSM_Contig/Conti... 44 4e-04
Contig-U12722-1 (Contig-U12722-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U06707-1 (Contig-U06707-1Q) /CSM_Contig/Conti... 42 0.002
Contig-U14355-1 (Contig-U14355-1Q) /CSM_Contig/Conti... 40 0.006

>Contig-U08900-1 (Contig-U08900-1Q) /CSM_Contig/Contig-U08900-1Q.Seq.d
Length = 1362

Score = 2599 bits (1311), Expect = 0.0
Identities = 1341/1341 (100%)
Strand = Plus / Plus


Query: 1 taaagagagaatggcatgaattagttgaaacatgtaatagagatatatttggtaataaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaagagagaatggcatgaattagttgaaacatgtaatagagatatatttggtaataaag 60


Query: 61 aatttagaaatttacaaattgaagctataaattcaattttacatgatagggatacatttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatttagaaatttacaaattgaagctataaattcaattttacatgatagggatacatttg 120


Query: 121 taagtttaccaactggtggcggtaagagtttgtgttttcaaattccatcaatcgttgatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taagtttaccaactggtggcggtaagagtttgtgttttcaaattccatcaatcgttgatc 180


Query: 181 atagaggtgtgacatttgtaatatcaccattgttggcattgatgcaggatcaagtgcaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atagaggtgtgacatttgtaatatcaccattgttggcattgatgcaggatcaagtgcaca 240


Query: 241 aattgaaatcattgggtattcccgcagagtcaatcaatagttcgggtagtcagcgtgaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aattgaaatcattgggtattcccgcagagtcaatcaatagttcgggtagtcagcgtgaga 300


Query: 301 atagggatgttttagaccaattattaaatggtgaaacttgtaaattgaaattaatttata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atagggatgttttagaccaattattaaatggtgaaacttgtaaattgaaattaatttata 360


Query: 361 ttacacctgaaagattggcacaatctgaattcttgcatttgttagaccaattgtacgacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttacacctgaaagattggcacaatctgaattcttgcatttgttagaccaattgtacgacc 420


Query: 421 aaggtaggttgagaagattagtggtggacgaagctcattgtatctctgaatggggccaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaggtaggttgagaagattagtggtggacgaagctcattgtatctctgaatggggccaca 480


Query: 481 gtttcaggccaaagtacagactaatttccacatttcgtgatcgattcccctctgtaccga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtttcaggccaaagtacagactaatttccacatttcgtgatcgattcccctctgtaccga 540


Query: 541 tatcggcattcactgctagtgcaacgtcaaatgttgaaattgatattaaaaactcactaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tatcggcattcactgctagtgcaacgtcaaatgttgaaattgatattaaaaactcactaa 600


Query: 601 aaatggttaacccaattacaatcaattcaagttttctccgaccaaatttactatacnnnn 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaatggttaacccaattacaatcaattcaagttttctccgaccaaatttactatacnnnn 660


Query: 661 nnnnnnatttttatcatgctaaactcagtaatactcaacgttcgaaattacaaaaagatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 nnnnnnatttttatcatgctaaactcagtaatactcaacgttcgaaattacaaaaagatt 720


Query: 721 ggaccaatggtgaatttaaaatagtttgtacaacaattgcatttggtatgggtattgata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggaccaatggtgaatttaaaatagtttgtacaacaattgcatttggtatgggtattgata 780


Query: 781 aaggtgatacaagattcgtcattcatcattcaatgcctcaatcaatggaatcctattatc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aaggtgatacaagattcgtcattcatcattcaatgcctcaatcaatggaatcctattatc 840


Query: 841 aacaaactggtagagctggtagagatggtaaacatagtgattgtttattattttataata 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aacaaactggtagagctggtagagatggtaaacatagtgattgtttattattttataata 900


Query: 901 aatctgatttaatgagatttaaacatataatatctcttaatcaaccaaaagatccattca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aatctgatttaatgagatttaaacatataatatctcttaatcaaccaaaagatccattca 960


Query: 961 atgcttttagtaattataatggtgttggtattggtgatattggtggtgaacatttaatat 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 atgcttttagtaattataatggtgttggtattggtgatattggtggtgaacatttaatat 1020


Query: 1021 tagataatgatggtaattatattagcaattattcatcagatgaatctcaatatatggata 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 tagataatgatggtaattatattagcaattattcatcagatgaatctcaatatatggata 1080


Query: 1081 ctattaaaaataaaattcaacaaacatccacaaaacttgaaatgttggacagtgttgctt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ctattaaaaataaaattcaacaaacatccacaaaacttgaaatgttggacagtgttgctt 1140


Query: 1141 cattttgctcaactcaatcgaaatgtcgtcgtgtaactttattaaattattttggtgaaa 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 cattttgctcaactcaatcgaaatgtcgtcgtgtaactttattaaattattttggtgaaa 1200


Query: 1201 actcaaaatcttgtggaaatatgtgtgatatttgtatttcaaattcaaattcaaattcaa 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 actcaaaatcttgtggaaatatgtgtgatatttgtatttcaaattcaaattcaaattcaa 1260


Query: 1261 ataatagatcaaaagcaaaacaaaatcaaatcgattactctgaaagaatttataatagaa 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 ataatagatcaaaagcaaaacaaaatcaaatcgattactctgaaagaatttataatagaa 1320


Query: 1321 attctattcaatttcatcttt 1341
|||||||||||||||||||||
Sbjct: 1321 attctattcaatttcatcttt 1341


>Contig-U09358-1 (Contig-U09358-1Q) /CSM_Contig/Contig-U09358-1Q.Seq.d
Length = 930

Score = 54.0 bits (27), Expect = 4e-07
Identities = 30/31 (96%)
Strand = Plus / Plus


Query: 751 caacaattgcatttggtatgggtattgataa 781
|||| ||||||||||||||||||||||||||
Sbjct: 700 caaccattgcatttggtatgggtattgataa 730


Score = 38.2 bits (19), Expect = 0.024
Identities = 22/23 (95%)
Strand = Plus / Plus


Query: 141 ggtaagagtttgtgttttcaaat 163
||||| |||||||||||||||||
Sbjct: 173 ggtaaaagtttgtgttttcaaat 195


Score = 36.2 bits (18), Expect = 0.097
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 852 agagctggtagagatggt 869
||||||||||||||||||
Sbjct: 801 agagctggtagagatggt 818


>Contig-U04427-1 (Contig-U04427-1Q) /CSM_Contig/Contig-U04427-1Q.Seq.d
Length = 876

Score = 54.0 bits (27), Expect = 4e-07
Identities = 27/27 (100%)
Strand = Plus / Plus


Query: 1240 caaattcaaattcaaattcaaataata 1266
|||||||||||||||||||||||||||
Sbjct: 453 caaattcaaattcaaattcaaataata 479


Score = 38.2 bits (19), Expect = 0.024
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 1238 ttcaaattcaaattcaaat 1256
|||||||||||||||||||
Sbjct: 457 ttcaaattcaaattcaaat 475


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 26,387
Number of Sequences: 6905
Number of extensions: 26387
Number of successful extensions: 3258
Number of sequences better than 10.0: 359
length of query: 1362
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1346
effective length of database: 5,564,391
effective search space: 7489670286
effective search space used: 7489670286
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.13
Homology vs DNA
Query= Contig-U08900-1 (Contig-U08900-1Q) /CSM_Contig/Contig-U08900-1Q.Seq.d
(1362 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ360035) Dictyostelium discoideum cDNA clone:ddc3k24, 5' e... 1300 0.0 1
(AC115607) Dictyostelium discoideum chromosome 2 map 4559693... 1292 0.0 1
(BJ373612) Dictyostelium discoideum cDNA clone:ddc3k24, 3' e... 1132 0.0 1
(AL396973) T7 end of clone XAR0AA001H06 of library XAR0AA fr... 72 2e-18 3
(AL392844) T7 end of clone AR0AA007C05 of library AR0AA from... 72 2e-18 3
(ER567510) 1093015775684 Global-Ocean-Sampling_GS-36-01-01-2... 46 3e-09 3
(EJ931140) 1093018807384 Global-Ocean-Sampling_GS-30-02-01-1... 44 4e-07 3
(EJ924482) 1093018775752 Global-Ocean-Sampling_GS-30-02-01-1... 44 5e-07 3
(EJ473632) 1095403428618 Global-Ocean-Sampling_GS-28-01-01-1... 56 5e-07 2
(AU037664) Dictyostelium discoideum slug cDNA, clone SSE150. 54 5e-06 2
(EJ835191) 1093017623593 Global-Ocean-Sampling_GS-30-02-01-1... 58 7e-06 2
(EJ997152) 1093024002412 Global-Ocean-Sampling_GS-30-02-01-1... 58 7e-06 2
(EK420786) 1095515504479 Global-Ocean-Sampling_GS-31-01-01-1... 46 8e-06 2
(EJ941244) 1093018867023 Global-Ocean-Sampling_GS-30-02-01-1... 46 8e-06 2
(EK429703) 1095516134250 Global-Ocean-Sampling_GS-31-01-01-1... 58 8e-06 2
(EK293335) 1095462337847 Global-Ocean-Sampling_GS-31-01-01-1... 64 1e-05 1
(EK244788) 1095460248026 Global-Ocean-Sampling_GS-31-01-01-1... 64 1e-05 1
(ER490192) 1093015322546 Global-Ocean-Sampling_GS-35-01-01-1... 52 2e-05 2
(EK088000) 1092961175964 Global-Ocean-Sampling_GS-31-01-01-1... 52 3e-05 2
(AC225691) Monodelphis domestica clone VMRC18-893H6, WORKING... 48 5e-05 2
(CZ280309) cp10g04.f Candida parapsilosis Random Genomic Lib... 46 8e-05 3
(CZ283682) cp31c03.f Candida parapsilosis Random Genomic Lib... 46 8e-05 3
(EJ516072) 1092955093855 Global-Ocean-Sampling_GS-29-01-01-1... 44 1e-04 2
(EJ521222) 1092955142042 Global-Ocean-Sampling_GS-29-01-01-1... 44 1e-04 2
(EJ936435) 1093018841441 Global-Ocean-Sampling_GS-30-02-01-1... 40 2e-04 3
(ER420426) 1092963699675 Global-Ocean-Sampling_GS-35-01-01-1... 42 3e-04 3
(EJ133798) 1092343583010 Global-Ocean-Sampling_GS-27-01-01-1... 38 4e-04 3
(DY961764) CLSM12098.b1_C02.ab1 CLS(LMS) lettuce sativa Lact... 40 4e-04 3
(FI090810) presp302_c_124 Prevotella sp. oral taxon 302 F002... 44 4e-04 3
(AC164044) Bos taurus clone CH240-96I21, WORKING DRAFT SEQUE... 46 7e-04 2
(BC126495) Bos taurus RecQ protein-like (DNA helicase Q1-lik... 46 8e-04 2
(EE386038) LB03081.CR_I07 GC_BGC-30 Bos taurus cDNA clone IM... 46 8e-04 2
(CN789452) 4123915 BARC 8BOV Bos taurus cDNA clone 8BOV_30D2... 46 8e-04 2
(DY466968) 1609094 MARC 11BOV Bos taurus cDNA 5', mRNA seque... 46 9e-04 2
(EE806563) 010914ONDC099047HT ONDC Ovis aries cDNA, mRNA seq... 46 9e-04 2
(EJ228035) 1092402525134 Global-Ocean-Sampling_GS-27-01-01-1... 58 0.001 1
(EJ111512) 1092343156024 Global-Ocean-Sampling_GS-27-01-01-1... 58 0.001 1
(EJ350571) 1092963584056 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.001 2
(EJ925675) 1093018780944 Global-Ocean-Sampling_GS-30-02-01-1... 44 0.001 2
(EJ842364) 1093017838698 Global-Ocean-Sampling_GS-30-02-01-1... 44 0.002 2
(EJ253257) 1095347002450 Global-Ocean-Sampling_GS-27-01-01-1... 38 0.004 3
(CZ280178) cp10a07.f Candida parapsilosis Random Genomic Lib... 46 0.005 2
(CZ289543) cp64g07.r Candida parapsilosis Random Genomic Lib... 46 0.005 2
(EJ206361) 1092344352977 Global-Ocean-Sampling_GS-27-01-01-1... 50 0.006 2
(EJ485858) 1095403500140 Global-Ocean-Sampling_GS-28-01-01-1... 44 0.006 2
(EK515736) 1095515498221 Global-Ocean-Sampling_GS-32-01-01-1... 40 0.006 2
(EJ497612) 1095403583726 Global-Ocean-Sampling_GS-28-01-01-1... 44 0.012 2
(EI026196) bb77h04.f Dekkera bruxellensis Random Genomic Lib... 54 0.014 1
(EI021566) bb30b04.r Dekkera bruxellensis Random Genomic Lib... 54 0.014 1
(EI018219) bb49b05.r Dekkera bruxellensis Random Genomic Lib... 54 0.014 1
(EI015215) bb75c11.f Dekkera bruxellensis Random Genomic Lib... 54 0.014 1
(EI014316) bb75g07.f Dekkera bruxellensis Random Genomic Lib... 54 0.014 1
(DV471867) 5261_B10_D19Z_078 Brachypodium distachyon callus ... 48 0.021 2
(ER512680) 1093015463221 Global-Ocean-Sampling_GS-35-01-01-1... 44 0.022 2
(AC191812) Rhesus Macaque BAC CH250-85J15 () complete seque... 42 0.036 2
(AC197596) Macaca mulatta clone CH250-320K2, WORKING DRAFT S... 42 0.036 2
(DD120887) STAPHYLOCOCCUS AUREUS PROTEINS AND NUCLEIC ACIDS. 44 0.042 2
(CS710547) Sequence 3087 from Patent EP1829892. 44 0.042 2
(AX620124) Sequence 3087 from Patent WO02094868. 44 0.042 2
(DJ377071) Identification of Essential Genes in Prokaryotes. 44 0.042 2
(AB173945) Macaca fascicularis brain cDNA clone: QmoA-11280,... 42 0.044 2
(CO646379) ILLUMIGEN_MCQ_39104 Katze_MMPB2 Macaca mulatta cD... 42 0.045 2
(FC161653) 1106908675437 BABEVPN-C-01-1-7KB Papio anubis cDN... 42 0.045 2
(FC113110) 1106800404364 BABEVPN-C-01-1-7KB Papio anubis cDN... 42 0.045 2
(EJ730898) 1092960128798 Global-Ocean-Sampling_GS-30-02-01-1... 40 0.051 3
(EA076317) Sequence 3675 from patent US 7183083. 52 0.056 1
(AX145707) Sequence 4429 from Patent WO0134809. 52 0.056 1
(AX144433) Sequence 3155 from Patent WO0134809. 52 0.056 1
(AR890014) Sequence 3675 from patent US 7060458. 52 0.056 1
(AR486343) Sequence 4429 from patent US 6703492. 52 0.056 1
(AR485159) Sequence 3155 from patent US 6703492. 52 0.056 1
(EK067471) 1092960143666 Global-Ocean-Sampling_GS-31-01-01-1... 52 0.056 1
(CL044610) CH216-61I23_Sp6.1 CH216 Xenopus (Silurana) tropic... 52 0.056 1
(BZ423494) id50a01.g1 WGS-SbicolorF (DH5a methyl filtered) S... 52 0.056 1
(CP000300) Methanococcoides burtonii DSM 6242, complete genome. 52 0.056 1
(CP000029) Staphylococcus epidermidis RP62A, complete genome. 52 0.056 1
(AF270389) Staphylococcus epidermidis strain SR1 clone step.... 52 0.056 1
(AE015929) Staphylococcus epidermidis ATCC 12228, complete g... 52 0.056 1
(BU004297) QGG4b08.yg.ab1 QG_EFGHJ lettuce serriola Lactuca ... 46 0.060 2
(EK143572) 1095456008835 Global-Ocean-Sampling_GS-31-01-01-1... 46 0.063 2
(CZ543561) SRAA-aad50g02.g1 Strongyloides ratti whole genome... 48 0.077 2
(EJ683172) 1092955151250 Global-Ocean-Sampling_GS-30-02-01-1... 40 0.080 3
(ER423009) 1092963725208 Global-Ocean-Sampling_GS-35-01-01-1... 42 0.081 2
(EJ115317) 1092343282256 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.081 2
(AM180355) Clostridium difficile 630 complete genome. 48 0.15 20
(AE014820) Plasmodium falciparum 3D7 chromosome 14 section 5... 36 0.18 13
(DQ927304) Tetrahymena paravorax strain RP mitochondrion, co... 34 0.20 7
(AC128626) Rattus norvegicus clone CH230-262D20, WORKING DRA... 50 0.22 1
(AC103214) Rattus norvegicus clone CH230-13K21, *** SEQUENCI... 50 0.22 1
(EJ587794) 1092961028409 Global-Ocean-Sampling_GS-29-01-01-1... 50 0.22 1
(EJ524326) 1092955172348 Global-Ocean-Sampling_GS-29-01-01-1... 50 0.22 1
(EJ252100) 1095344039800 Global-Ocean-Sampling_GS-27-01-01-1... 50 0.22 1
(ED631923) GM_WBa0034D16.f GM_WBa Glycine max genomic clone ... 50 0.22 1
(DY609599) IMMUNEF045804L1 POSSUM_01-C-POSSUM-IMMUNE-2KB Tri... 50 0.22 1
(CU582793) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.29 3
(CZ536661) SRAA-aad04e09.b1 Strongyloides ratti whole genome... 38 0.31 2
(BP915734) Adiantum capillus-veneris mRNA, clone: YMU001_000... 32 0.38 4
(AB179177) Macaca fascicularis testis cDNA clone: QtsA-14155... 36 0.42 3
(AY052404) Blumeria graminis QDE3-like protein (Qde3) gene, ... 38 0.50 2
(AB301598) Cerataphis freycinetiae mitochondrial genes for s... 46 0.53 2

>(BJ360035) Dictyostelium discoideum cDNA clone:ddc3k24, 5' end,
single read.
Length = 657

Score = 1300 bits (656), Expect = 0.0
Identities = 656/656 (100%)
Strand = Plus / Plus


Query: 1 taaagagagaatggcatgaattagttgaaacatgtaatagagatatatttggtaataaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taaagagagaatggcatgaattagttgaaacatgtaatagagatatatttggtaataaag 60


Query: 61 aatttagaaatttacaaattgaagctataaattcaattttacatgatagggatacatttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatttagaaatttacaaattgaagctataaattcaattttacatgatagggatacatttg 120


Query: 121 taagtttaccaactggtggcggtaagagtttgtgttttcaaattccatcaatcgttgatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taagtttaccaactggtggcggtaagagtttgtgttttcaaattccatcaatcgttgatc 180


Query: 181 atagaggtgtgacatttgtaatatcaccattgttggcattgatgcaggatcaagtgcaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atagaggtgtgacatttgtaatatcaccattgttggcattgatgcaggatcaagtgcaca 240


Query: 241 aattgaaatcattgggtattcccgcagagtcaatcaatagttcgggtagtcagcgtgaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aattgaaatcattgggtattcccgcagagtcaatcaatagttcgggtagtcagcgtgaga 300


Query: 301 atagggatgttttagaccaattattaaatggtgaaacttgtaaattgaaattaatttata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atagggatgttttagaccaattattaaatggtgaaacttgtaaattgaaattaatttata 360


Query: 361 ttacacctgaaagattggcacaatctgaattcttgcatttgttagaccaattgtacgacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttacacctgaaagattggcacaatctgaattcttgcatttgttagaccaattgtacgacc 420


Query: 421 aaggtaggttgagaagattagtggtggacgaagctcattgtatctctgaatggggccaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaggtaggttgagaagattagtggtggacgaagctcattgtatctctgaatggggccaca 480


Query: 481 gtttcaggccaaagtacagactaatttccacatttcgtgatcgattcccctctgtaccga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtttcaggccaaagtacagactaatttccacatttcgtgatcgattcccctctgtaccga 540


Query: 541 tatcggcattcactgctagtgcaacgtcaaatgttgaaattgatattaaaaactcactaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tatcggcattcactgctagtgcaacgtcaaatgttgaaattgatattaaaaactcactaa 600


Query: 601 aaatggttaacccaattacaatcaattcaagttttctccgaccaaatttactatac 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaatggttaacccaattacaatcaattcaagttttctccgaccaaatttactatac 656

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,522,734,619
Number of extensions: 95392259
Number of successful extensions: 8241138
Number of sequences better than 10.0: 221
Length of query: 1362
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1338
Effective length of database: 97,308,875,965
Effective search space: 130199276041170
Effective search space used: 130199276041170
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.24
Homology vs Protein
Query= Contig-U08900-1 (Contig-U08900-1Q) /CSM_Contig/Contig-U08900-1Q.Seq.d
(1362 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC134322_1(AC134322|pid:none) Medicago truncatula clone mth2-17i... 301 4e-80
(Q09811) RecName: Full=ATP-dependent DNA helicase hus2/rqh1; ... 296 9e-79
AL590447_114(AL590447|pid:none) chromosome VII of strain GB-M1 o... 291 5e-77
AF205407_1(AF205407|pid:none) Neurospora crassa QDE3 protein (qd... 289 2e-76
AY120761_1(AY120761|pid:none) Arabidopsis thaliana DNA helicase ... 283 1e-74
AJ404473_1(AJ404473|pid:none) Arabidopsis thaliana mRNA for DNA ... 283 1e-74
AJ404474_1(AJ404474|pid:none) Arabidopsis thaliana mRNA for DNA ... 281 3e-74
CR382138_145(CR382138|pid:none) Debaryomyces hansenii strain CBS... 281 5e-74
B86243(B86243) DNA helicase homolog, 74946-78841 [imported] - Ar... 280 7e-74
AP007155_260(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 275 3e-72
CR382124_530(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 275 4e-72
FN392319_1526(FN392319|pid:none) Pichia pastoris GS115 chromosom... 274 6e-72
AP008217_1445(AP008217|pid:none) Oryza sativa (japonica cultivar... 274 6e-72
FM992689_979(FM992689|pid:none) Candida dubliniensis CD36 chromo... 268 3e-70
AF259396_1(AF259396|pid:none) Aspergillus nidulans RecQ helicase... 268 3e-70
CU928181_327(CU928181|pid:none) Zygosaccharomyces rouxii strain ... 268 4e-70
BX538353_6(BX538353|pid:none) Cryptosporidium parvum chromosome ... 267 6e-70
CP000500_675(CP000500|pid:none) Pichia stipitis CBS 6054 chromos... 266 2e-69
AK295194_1(AK295194|pid:none) Homo sapiens cDNA FLJ56969 complet... 263 8e-69
AY052404_1(AY052404|pid:none) Blumeria graminis QDE3-like protei... 260 9e-68
AJ404470_1(AJ404470|pid:none) Arabidopsis thaliana mRNA for DNA ... 258 3e-67
(P54132) RecName: Full=Bloom syndrome protein; EC=3.6.1... 258 5e-67
CP000510_192(CP000510|pid:none) Psychromonas ingrahamii 37, comp... 258 5e-67
AB008674_1(AB008674|pid:none) Mus musculus mRNA for mBlm, comple... 256 2e-66
(O88700) RecName: Full=Bloom syndrome protein homolog; ... 256 2e-66
CU928180_112(CU928180|pid:none) Kluyveromyces thermotolerans str... 255 2e-66
CP001108_60(CP001108|pid:none) Prosthecochloris aestuarii DSM 27... 254 4e-66
EF148838_1(EF148838|pid:none) Populus trichocarpa x Populus delt... 253 1e-65
CP000099_1145(CP000099|pid:none) Methanosarcina barkeri str. Fus... 253 1e-65
(Q9I920) RecName: Full=Bloom syndrome protein homolog; ... 253 1e-65
AC159703_22(AC159703|pid:none) Trypanosoma brucei chromosome 8 c... 253 1e-65
(Q9DEY9) RecName: Full=Bloom syndrome protein homolog; ... 252 2e-65
CP000950_3947(CP000950|pid:none) Yersinia pseudotuberculosis YPI... 252 2e-65
AE009952_390(AE009952|pid:none) Yersinia pestis KIM, complete ge... 252 2e-65
AC018908_7(AC018908|pid:none) Arabidopsis thaliana chromosome 1 ... 251 3e-65
CP000559_20(CP000559|pid:none) Methanocorpusculum labreanum Z, c... 251 4e-65
T24415(T24415)hypothetical protein T04A11.6 - Caenorhabditis ele... 251 4e-65
AJ404471_1(AJ404471|pid:none) Arabidopsis thaliana mRNA for DNA ... 251 6e-65
CR954246_2506(CR954246|pid:none) Pseudoalteromonas haloplanktis ... 251 6e-65
CP000020_68(CP000020|pid:none) Vibrio fischeri ES114 chromosome ... 250 7e-65
CP001139_67(CP001139|pid:none) Vibrio fischeri MJ11 chromosome I... 250 7e-65
EU956995_1(EU956995|pid:none) Zea mays clone 1579825 unknown mRNA. 249 2e-64
CT573073_976(CT573073|pid:none) Kuenenia stuttgartiensis genome ... 249 2e-64
EF486797_1(EF486797|pid:none) Oryzias latipes Bloom syndrome hel... 249 2e-64
(Q9VGI8) RecName: Full=Bloom syndrome protein homolog; ... 249 2e-64
BX511171_2(BX511171|pid:none) Zebrafish DNA sequence from clone ... 248 3e-64
AL606626_8(AL606626|pid:none) Oryza sativa genomic DNA, chromoso... 248 4e-64
U92536_1(U92536|pid:none) Drosophila melanogaster RECQ helicase ... 248 5e-64
CP001124_3649(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 248 5e-64
CP000139_1950(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 247 8e-64
CR380954_26(CR380954|pid:none) Candida glabrata strain CBS138 ch... 246 1e-63
CP000254_2319(CP000254|pid:none) Methanospirillum hungatei JF-1,... 246 1e-63
AE008384_1217(AE008384|pid:none) Methanosarcina mazei strain Goe... 246 1e-63
CP001103_194(CP001103|pid:none) Alteromonas macleodii 'Deep ecot... 246 2e-63
CP000828_5456(CP000828|pid:none) Acaryochloris marina MBIC11017,... 246 2e-63
CP000687_1085(CP000687|pid:none) Actinobacillus pleuropneumoniae... 246 2e-63
CP000644_161(CP000644|pid:none) Aeromonas salmonicida subsp. sal... 246 2e-63
CP001091_1174(CP001091|pid:none) Actinobacillus pleuropneumoniae... 244 4e-63
CR626927_3163(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 244 5e-63
CP000962_1053(CP000962|pid:none) Clostridium botulinum A3 str. L... 244 5e-63
AM412317_994(AM412317|pid:none) Clostridium botulinum A str. ATC... 244 7e-63
AM942759_3315(AM942759|pid:none) Proteus mirabilis strain HI4320... 244 7e-63
CR940353_458(CR940353|pid:none) Theileria annulata strain Ankara... 243 9e-63
CP001101_66(CP001101|pid:none) Chlorobium phaeobacteroides BS1, ... 243 9e-63
CP000462_3971(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 243 9e-63
AE010299_4393(AE010299|pid:none) Methanosarcina acetivorans str.... 243 9e-63
BX950851_4145(BX950851|pid:none) Erwinia carotovora subsp. atros... 243 9e-63
CP000447_3785(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 243 1e-62
CP000939_995(CP000939|pid:none) Clostridium botulinum B1 str. Ok... 243 1e-62
CP001097_41(CP001097|pid:none) Chlorobium limicola DSM 245, comp... 243 2e-62
CP000728_974(CP000728|pid:none) Clostridium botulinum F str. Lan... 243 2e-62
AM778952_33(AM778952|pid:none) Microcystis aeruginosa PCC 7806 g... 243 2e-62
CP000302_330(CP000302|pid:none) Shewanella denitrificans OS217, ... 242 3e-62
CP001581_1048(CP001581|pid:none) Clostridium botulinum A2 str. K... 241 3e-62
CP000627_2481(CP000627|pid:none) Vibrio cholerae O395 chromosome... 241 4e-62
CP001291_1397(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 241 4e-62
CP000140_1130(CP000140|pid:none) Parabacteroides distasonis ATCC... 241 4e-62
AE014299_4125(AE014299|pid:none) Shewanella oneidensis MR-1, com... 241 6e-62
AE003852_194(AE003852|pid:none) Vibrio cholerae O1 biovar eltor ... 241 6e-62
AL157959_1977(AL157959|pid:none) Neisseria meningitidis serogrou... 241 6e-62
CP000388_251(CP000388|pid:none) Pseudoalteromonas atlantica T6c,... 241 6e-62
CP000746_343(CP000746|pid:none) Actinobacillus succinogenes 130Z... 240 7e-62
CP000946_4095(CP000946|pid:none) Escherichia coli ATCC 8739, com... 240 7e-62
CP000083_69(CP000083|pid:none) Colwellia psychrerythraea 34H, co... 240 1e-61
AP009552_89(AP009552|pid:none) Microcystis aeruginosa NIES-843 D... 240 1e-61
CP001102_1078(CP001102|pid:none) Candidatus Amoebophilus asiatic... 240 1e-61
CP000753_379(CP000753|pid:none) Shewanella baltica OS185, comple... 240 1e-61
CP001020_1234(CP001020|pid:none) Coxiella burnetii CbuK_Q154, co... 239 1e-61
AM494961_133(AM494961|pid:none) Leishmania braziliensis chromoso... 239 1e-61
AM421808_256(AM421808|pid:none) Neisseria meningitidis serogroup... 239 1e-61
AE016828_398(AE016828|pid:none) Coxiella burnetii RSA 493, compl... 239 1e-61
CP001321_11(CP001321|pid:none) Haemophilus parasuis SH0165, comp... 239 2e-61
CR940348_451(CR940348|pid:none) Theileria annulata strain Ankara... 239 2e-61
AB114857_1(AB114857|pid:none) Lentinula edodes Le.recQ gene for ... 239 2e-61
CP000783_3626(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 239 2e-61
AE000513_1267(AE000513|pid:none) Deinococcus radiodurans R1 chro... 239 2e-61
AE017180_893(AE017180|pid:none) Geobacter sulfurreducens PCA, co... 239 2e-61
CU207366_1726(CU207366|pid:none) Gramella forsetii KT0803 comple... 239 2e-61
AE002098_262(AE002098|pid:none) Neisseria meningitidis MC58, com... 239 2e-61
FM180568_4122(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 239 2e-61
CP001252_400(CP001252|pid:none) Shewanella baltica OS223, comple... 238 3e-61
CP000563_379(CP000563|pid:none) Shewanella baltica OS155, comple... 238 3e-61
CP000822_151(CP000822|pid:none) Citrobacter koseri ATCC BAA-895,... 238 3e-61
(P15043) RecName: Full=ATP-dependent DNA helicase recQ; ... 238 4e-61
CP000142_2541(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 238 4e-61
AE005674_3902(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 238 4e-61
CP000266_3412(CP000266|pid:none) Shigella flexneri 5 str. 8401, ... 238 4e-61
CU928163_4252(CU928163|pid:none) Escherichia coli UMN026 chromos... 238 4e-61
M87049_54(M87049|pid:none) E. coli genomic sequence of the regio... 238 4e-61
CP001019_1376(CP001019|pid:none) Coxiella burnetii CbuG_Q212, co... 238 4e-61
CP000117_2683(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 238 4e-61
CP000446_3572(CP000446|pid:none) Shewanella sp. MR-4, complete g... 238 4e-61
CP000653_3939(CP000653|pid:none) Enterobacter sp. 638, complete ... 238 5e-61
CP000469_3736(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 238 5e-61
CP001616_2937(CP001616|pid:none) Tolumonas auensis DSM 9187, com... 238 5e-61
CP000109_1993(CP000109|pid:none) Thiomicrospira crunogena XCL-2,... 238 5e-61
CP000247_3978(CP000247|pid:none) Escherichia coli 536, complete ... 237 6e-61
CU928162_4386(CU928162|pid:none) Escherichia coli ED1a chromosom... 237 6e-61
CP000671_1489(CP000671|pid:none) Haemophilus influenzae PittEE, ... 237 8e-61
CP000947_1825(CP000947|pid:none) Haemophilus somnus 2336, comple... 237 8e-61
CP000436_1712(CP000436|pid:none) Haemophilus somnus 129PT, compl... 237 8e-61
CP000383_294(CP000383|pid:none) Cytophaga hutchinsonii ATCC 3340... 237 8e-61
CP000951_1869(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 237 8e-61
CP000647_4261(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 236 1e-60
CU928160_3882(CU928160|pid:none) Escherichia coli IAI1 chromosom... 236 1e-60
AP006725_162(AP006725|pid:none) Klebsiella pneumoniae NTUH-K2044... 236 1e-60
AE017143_408(AE017143|pid:none) Haemophilus ducreyi strain 35000... 236 1e-60
AE016825_477(AE016825|pid:none) Chromobacterium violaceum ATCC 1... 236 2e-60
(Q9CL21) RecName: Full=ATP-dependent DNA helicase recQ; ... 236 2e-60
AE004969_1570(AE004969|pid:none) Neisseria gonorrhoeae FA 1090, ... 236 2e-60
AF047374_1(AF047374|pid:none) Neisseria gonorrhoeae RecQ (recQ) ... 236 2e-60
CP001050_2121(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945... 236 2e-60
CP001323_169(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 236 2e-60
CP001600_115(CP001600|pid:none) Edwardsiella ictaluri 93-146, co... 235 2e-60
AY442255_1(AY442255|pid:none) Populus alba x Populus tremula clo... 235 3e-60
BX294143_106(BX294143|pid:none) Rhodopirellula baltica SH 1 comp... 235 3e-60
AE010300_964(AE010300|pid:none) Leptospira interrogans serovar l... 234 5e-60
CP000482_1133(CP000482|pid:none) Pelobacter propionicus DSM 2379... 234 5e-60
CT005263_152(CT005263|pid:none) Leishmania major strain Friedlin... 234 5e-60
AE016795_895(AE016795|pid:none) Vibrio vulnificus CMCP6 chromoso... 234 5e-60
CP000880_3550(CP000880|pid:none) Salmonella enterica subsp. ariz... 234 7e-60
CP000057_779(CP000057|pid:none) Haemophilus influenzae 86-028NP,... 234 7e-60
AM933172_3739(AM933172|pid:none) Salmonella enterica subsp. ente... 233 9e-60
CP000672_1160(CP000672|pid:none) Haemophilus influenzae PittGG, ... 233 9e-60
CP001037_3178(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 233 9e-60
CP001107_254(CP001107|pid:none) Eubacterium rectale ATCC 33656, ... 233 1e-59
CP001127_3876(CP001127|pid:none) Salmonella enterica subsp. ente... 232 2e-59
AM902716_901(AM902716|pid:none) Bordetella petrii strain DSM 128... 232 2e-59
CP000148_2685(CP000148|pid:none) Geobacter metallireducens GS-15... 232 3e-59
AE014613_3122(AE014613|pid:none) Salmonella enterica subsp. ente... 231 3e-59
AE017220_3857(AE017220|pid:none) Salmonella enterica subsp. ente... 231 3e-59
CP000096_1629(CP000096|pid:none) Pelodictyon luteolum DSM 273, c... 231 3e-59
CP000780_1086(CP000780|pid:none) Candidatus Methanoregula boonei... 231 3e-59
AP009049_2097(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 231 5e-59
CP000673_2327(CP000673|pid:none) Clostridium kluyveri DSM 555, c... 231 5e-59
CP000655_691(CP000655|pid:none) Polynucleobacter necessarius sub... 231 5e-59
CP001099_656(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 231 6e-59
AE006468_3839(AE006468|pid:none) Salmonella enterica subsp. ente... 230 8e-59
AC007654_16(AC007654|pid:none) Genomic sequence for Arabidopsis ... 229 1e-58
CP000698_4221(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 229 1e-58
CP000153_1923(CP000153|pid:none) Sulfurimonas denitrificans DSM ... 229 2e-58
CP000473_942(CP000473|pid:none) Solibacter usitatus Ellin6076, c... 228 3e-58
CP001336_2881(CP001336|pid:none) Desulfitobacterium hafniense DC... 228 3e-58
CP000614_309(CP000614|pid:none) Burkholderia vietnamiensis G4 ch... 228 4e-58
CP001102_1206(CP001102|pid:none) Candidatus Amoebophilus asiatic... 228 4e-58
AE017226_323(AE017226|pid:none) Treponema denticola ATCC 35405, ... 228 4e-58
CP000076_1553(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 228 5e-58
CU207366_584(CU207366|pid:none) Gramella forsetii KT0803 complet... 228 5e-58
BX640434_30(BX640434|pid:none) Bordetella parapertussis strain 1... 227 7e-58
AE015927_1874(AE015927|pid:none) Clostridium tetani E88, complet... 227 7e-58
CR628337_903(CR628337|pid:none) Legionella pneumophila str. Lens... 227 9e-58
CP000529_112(CP000529|pid:none) Polaromonas naphthalenivorans CJ... 227 9e-58
CP000781_4268(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 226 1e-57
AE017340_2535(AE017340|pid:none) Idiomarina loihiensis L2TR, com... 226 1e-57
CP000378_2747(CP000378|pid:none) Burkholderia cenocepacia AU 105... 226 1e-57
CP000246_1510(CP000246|pid:none) Clostridium perfringens ATCC 13... 226 1e-57
CP000312_1304(CP000312|pid:none) Clostridium perfringens SM101, ... 226 1e-57
BX640421_159(BX640421|pid:none) Bordetella pertussis strain Toha... 226 2e-57
BX571965_3247(BX571965|pid:none) Burkholderia pseudomallei strai... 226 2e-57
AM747720_234(AM747720|pid:none) Burkholderia cenocepacia J2315 c... 226 2e-57
CP000526_3106(CP000526|pid:none) Burkholderia mallei SAVP1 chrom... 226 2e-57
CP000546_1880(CP000546|pid:none) Burkholderia mallei NCTC 10229 ... 226 2e-57
CP000284_1094(CP000284|pid:none) Methylobacillus flagellatus KT,... 226 2e-57
CP000086_3018(CP000086|pid:none) Burkholderia thailandensis E264... 225 2e-57
AP009385_2954(AP009385|pid:none) Burkholderia multivorans ATCC 1... 225 2e-57
CP000613_2379(CP000613|pid:none) Rhodospirillum centenum SW, com... 225 3e-57
AP008217_1573(AP008217|pid:none) Oryza sativa (japonica cultivar... 225 3e-57
CP000744_1773(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 225 3e-57
CP000450_2435(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 225 3e-57
CP000382_1402(CP000382|pid:none) Clostridium novyi NT, complete ... 225 3e-57
CP000360_3537(CP000360|pid:none) Acidobacteria bacterium Ellin34... 225 3e-57
AM295250_367(AM295250|pid:none) Staphylococcus carnosus subsp. c... 224 4e-57
CP000075_3737(CP000075|pid:none) Pseudomonas syringae pv. syring... 224 4e-57
AM849034_55(AM849034|pid:none) Clavibacter michiganensis subsp. ... 224 4e-57
CP000230_89(CP000230|pid:none) Rhodospirillum rubrum ATCC 11170,... 224 6e-57
CP000058_1460(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 224 6e-57
CP001096_5236(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 224 6e-57
CP000721_1805(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 224 6e-57
CP000269_2929(CP000269|pid:none) Janthinobacterium sp. Marseille... 224 7e-57
CP001503_242(CP001503|pid:none) Burkholderia glumae BGR1 chromos... 224 7e-57
CP000304_2411(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 224 7e-57
AE017354_847(AE017354|pid:none) Legionella pneumophila subsp. pn... 223 9e-57
AM920689_1224(AM920689|pid:none) Xanthomonas campestris pv. camp... 223 9e-57
CP000685_279(CP000685|pid:none) Flavobacterium johnsoniae UW101,... 223 1e-56
AE015924_1569(AE015924|pid:none) Porphyromonas gingivalis W83, c... 223 1e-56
CP000394_879(CP000394|pid:none) Granulibacter bethesdensis CGDNI... 223 2e-56
AM420293_3251(AM420293|pid:none) Saccharopolyspora erythraea NRR... 223 2e-56
CP001111_3097(CP001111|pid:none) Stenotrophomonas maltophilia R5... 222 2e-56
CP000033_940(CP000033|pid:none) Lactobacillus acidophilus NCFM, ... 222 2e-56
CU459003_3135(CU459003|pid:none) Magnetospirillum gryphiswaldens... 222 2e-56
CP001186_2699(CP001186|pid:none) Bacillus cereus G9842, complete... 222 2e-56
AE008923_3077(AE008923|pid:none) Xanthomonas axonopodis pv. citr... 222 3e-56
CP000667_3056(CP000667|pid:none) Salinispora tropica CNB-440, co... 222 3e-56
CP000612_1243(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 222 3e-56
AJ938182_670(AJ938182|pid:none) Staphylococcus aureus RF122 comp... 222 3e-56
CR555306_2385(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 222 3e-56
CP001176_2679(CP001176|pid:none) Bacillus cereus B4264, complete... 221 4e-56
CP000724_4520(CP000724|pid:none) Alkaliphilus metalliredigens QY... 221 4e-56
CP000680_1801(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 221 4e-56
AP008230_1775(AP008230|pid:none) Desulfitobacterium hafniense Y5... 221 4e-56
AP009152_2330(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 221 4e-56
CP000903_2551(CP000903|pid:none) Bacillus weihenstephanensis KBA... 221 5e-56
CP000282_1487(CP000282|pid:none) Saccharophagus degradans 2-40, ... 221 5e-56
AM286690_735(AM286690|pid:none) Alcanivorax borkumensis SK2, com... 221 5e-56
CP000348_2139(CP000348|pid:none) Leptospira borgpetersenii serov... 221 6e-56
CP001114_1240(CP001114|pid:none) Deinococcus deserti VCD115, com... 221 6e-56
CP000884_140(CP000884|pid:none) Delftia acidovorans SPH-1, compl... 220 8e-56
AM398681_1197(AM398681|pid:none) Flavobacterium psychrophilum JI... 220 8e-56
AE017194_2818(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 220 8e-56
BA000045_2629(BA000045|pid:none) Gloeobacter violaceus PCC 7421 ... 220 8e-56
AM260479_3411(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 220 8e-56
CP000116_896(CP000116|pid:none) Thiobacillus denitrificans ATCC ... 220 1e-55
CP001078_1987(CP001078|pid:none) Clostridium botulinum E3 str. A... 219 1e-55
CP000712_1376(CP000712|pid:none) Pseudomonas putida F1, complete... 219 2e-55
AP009153_1702(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 219 2e-55
CP001056_2271(CP001056|pid:none) Clostridium botulinum B str. Ek... 219 2e-55
CP000463_4870(CP000463|pid:none) Rhodopseudomonas palustris BisA... 219 2e-55
AE009442_581(AE009442|pid:none) Xylella fastidiosa Temecula1, co... 218 3e-55
AP006618_4501(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 218 4e-55
AM743169_3486(AM743169|pid:none) Stenotrophomonas maltophilia K2... 218 4e-55
BA000040_242(BA000040|pid:none) Bradyrhizobium japonicum USDA 11... 218 5e-55
CP001154_2755(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 218 5e-55
CP000139_427(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, ... 218 5e-55
AP008955_5674(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 218 5e-55
CP001215_1692(CP001215|pid:none) Bacillus anthracis str. CDC 684... 217 7e-55
AE017355_2541(AE017355|pid:none) Bacillus thuringiensis serovar ... 217 9e-55
AE016879_2593(AE016879|pid:none) Bacillus anthracis str. Ames, c... 216 1e-54
CP000009_2344(CP000009|pid:none) Gluconobacter oxydans 621H, com... 216 1e-54
CP000764_1828(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 216 1e-54
CP000941_673(CP000941|pid:none) Xylella fastidiosa M12, complete... 216 1e-54
AP008210_851(AP008210|pid:none) Oryza sativa (japonica cultivar-... 216 1e-54
CP000453_865(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-1... 216 1e-54
CP001011_633(CP001011|pid:none) Xylella fastidiosa M23, complete... 216 1e-54
CU207366_1427(CU207366|pid:none) Gramella forsetii KT0803 comple... 216 2e-54
AE015929_501(AE015929|pid:none) Staphylococcus epidermidis ATCC ... 216 2e-54
CU633749_2888(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 216 2e-54
BX294151_190(BX294151|pid:none) Rhodopirellula baltica SH 1 comp... 215 3e-54
AE016822_1762(AE016822|pid:none) Leifsonia xyli subsp. xyli str.... 215 3e-54
CP000029_378(CP000029|pid:none) Staphylococcus epidermidis RP62A... 215 3e-54
BA000016_343(BA000016|pid:none) Clostridium perfringens str. 13 ... 215 3e-54
CP000517_864(CP000517|pid:none) Lactobacillus helveticus DPC 457... 215 3e-54
AL954747_2566(AL954747|pid:none) Nitrosomonas europaea ATCC 1971... 215 3e-54
CP000934_125(CP000934|pid:none) Cellvibrio japonicus Ueda107, co... 215 3e-54
CP000283_4388(CP000283|pid:none) Rhodopseudomonas palustris BisB... 214 4e-54
AP009380_1551(AP009380|pid:none) Porphyromonas gingivalis ATCC 3... 214 6e-54
CP000885_1141(CP000885|pid:none) Clostridium phytofermentans ISD... 214 8e-54
AL939120_166(AL939120|pid:none) Streptomyces coelicolor A3(2) co... 213 1e-53
CP000413_962(CP000413|pid:none) Lactobacillus gasseri ATCC 33323... 213 1e-53
CP001078_2754(CP001078|pid:none) Clostridium botulinum E3 str. A... 213 1e-53
CP000721_4394(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 213 1e-53
CP001013_555(CP001013|pid:none) Leptothrix cholodnii SP-6, compl... 213 1e-53
AE007869_55(AE007869|pid:none) Agrobacterium tumefaciens str. C5... 213 2e-53
BA000030_4858(BA000030|pid:none) Streptomyces avermitilis MA-468... 213 2e-53
AP008934_1998(AP008934|pid:none) Staphylococcus saprophyticus su... 212 2e-53
CU234118_1063(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 211 4e-53
AJ404472_1(AJ404472|pid:none) Arabidopsis thaliana mRNA for DNA ... 211 4e-53
(P46063) RecName: Full=ATP-dependent DNA helicase Q1; E... 211 5e-53
D37984_1(D37984|pid:none) Homo sapiens mRNA for DNA helicase Q1,... 211 5e-53
AE017198_1016(AE017198|pid:none) Lactobacillus johnsonii NCC 533... 211 5e-53
AM270417_25(AM270417|pid:none) Uncultured organism cosmid clone ... 211 5e-53
BA000028_3041(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 211 5e-53
AY891375_1(AY891375|pid:none) Synthetic construct Homo sapiens c... 211 5e-53
CP000423_1008(CP000423|pid:none) Lactobacillus casei ATCC 334, c... 211 6e-53
CP001056_3014(CP001056|pid:none) Clostridium botulinum B str. Ek... 210 8e-53
CP000777_299(CP000777|pid:none) Leptospira biflexa serovar Patoc... 210 1e-52
CP000555_108(CP000555|pid:none) Methylibium petroleiphilum PM1, ... 210 1e-52
CP000494_6506(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 210 1e-52
AM889285_1749(AM889285|pid:none) Gluconacetobacter diazotrophicu... 209 1e-52
AP006716_2173(AP006716|pid:none) Staphylococcus haemolyticus JCS... 209 1e-52
CP000133_2913(CP000133|pid:none) Rhizobium etli CFN 42, complete... 209 1e-52
AC133008_18(AC133008|pid:none) Oryza sativa (japonica cultivar-g... 209 1e-52
BC168026_1(BC168026|pid:none) Xenopus tropicalis cDNA clone MGC:... 209 2e-52
CP000813_1823(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 209 2e-52
(Q5RF63) RecName: Full=ATP-dependent DNA helicase Q1; E... 208 3e-52
CP000319_3267(CP000319|pid:none) Nitrobacter hamburgensis X14, c... 208 4e-52
AF027868_53(AF027868|pid:none) Bacillus subtilis chromosome regi... 208 4e-52
AP006841_3926(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 207 5e-52
CR626927_3605(CR626927|pid:none) Bacteroides fragilis NCTC 9343,... 207 5e-52
CP000301_2950(CP000301|pid:none) Rhodopseudomonas palustris BisB... 207 7e-52
BX294156_150(BX294156|pid:none) Rhodopirellula baltica SH 1 comp... 207 9e-52
CP001071_1681(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 207 9e-52
CP001104_1646(CP001104|pid:none) Eubacterium eligens ATCC 27750,... 206 1e-51
AD1419(AD1419) ATP-dependent DNA helicases homolog lmo2757 [impo... 206 2e-51
CP001389_2226(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 205 3e-51
BX842655_8(BX842655|pid:none) Bdellovibrio bacteriovorus complet... 205 3e-51
CP000473_7614(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 205 3e-51
AE015928_3936(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 204 5e-51
AM263198_2704(AM263198|pid:none) Listeria welshimeri serovar 6b ... 204 6e-51
CR954253_790(CR954253|pid:none) Lactobacillus delbrueckii subsp.... 204 6e-51
CP000412_662(CP000412|pid:none) Lactobacillus delbrueckii subsp.... 204 6e-51
CP000634_881(CP000634|pid:none) Agrobacterium vitis S4 chromosom... 204 6e-51
AE017333_2107(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 204 6e-51
CP000113_1902(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 203 1e-50
AE1794(AE1794) ATP-dependent DNA helicases homolog lin2900 [impo... 203 1e-50
CP000685_137(CP000685|pid:none) Flavobacterium johnsoniae UW101,... 203 1e-50
CP000738_2198(CP000738|pid:none) Sinorhizobium medicae WSM419, c... 203 1e-50
CP000425_1836(CP000425|pid:none) Lactococcus lactis subsp. cremo... 202 2e-50
(Q5UPX0) RecName: Full=Putative ATP-dependent RNA helicase R290;... 202 3e-50
CP000422_539(CP000422|pid:none) Pediococcus pentosaceus ATCC 257... 202 3e-50
AY714855_28(AY714855|pid:none) Uncultured archaeon GZfos32E7 clo... 201 5e-50
AP006627_1838(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, c... 201 5e-50
AL591688_2326(AL591688|pid:none) Sinorhizobium meliloti 1021 com... 201 7e-50
CP000139_2005(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 200 9e-50
CP000094_275(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, c... 200 1e-49
BX842648_231(BX842648|pid:none) Bdellovibrio bacteriovorus compl... 199 1e-49
CP000264_443(CP000264|pid:none) Jannaschia sp. CCS1, complete ge... 199 1e-49
AM286690_1161(AM286690|pid:none) Alcanivorax borkumensis SK2, co... 199 1e-49
CP001191_2670(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 199 1e-49
CP001095_1932(CP001095|pid:none) Bifidobacterium longum subsp. i... 199 2e-49
AE005176_1808(AE005176|pid:none) Lactococcus lactis subsp. lacti... 199 2e-49
CP000248_3186(CP000248|pid:none) Novosphingobium aromaticivorans... 198 3e-49
CT005238_73(CT005238|pid:none) Methylocapsa acidiphila B2, overl... 198 3e-49
CP000821_2314(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 198 3e-49
CP000304_294(CP000304|pid:none) Pseudomonas stutzeri A1501, comp... 198 4e-49
AP010656_142(AP010656|pid:none) Candidatus Azobacteroides pseudo... 198 4e-49
AM398681_1954(AM398681|pid:none) Flavobacterium psychrophilum JI... 197 7e-49
AB074261_1(AB074261|pid:none) Gallus gallus mRNA for RECQL1 prot... 196 1e-48
CP000943_4(CP000943|pid:none) Methylobacterium sp. 4-46, complet... 196 2e-48
BT042100_1(BT042100|pid:none) Zea mays full-length cDNA clone ZM... 196 2e-48
CP001349_4(CP001349|pid:none) Methylobacterium nodulans ORS 2060... 196 2e-48
CP001298_7(CP001298|pid:none) Methylobacterium chloromethanicum ... 195 3e-48
CP000908_6(CP000908|pid:none) Methylobacterium extorquens PA1, c... 195 3e-48
CP000472_2486(CP000472|pid:none) Shewanella piezotolerans WP3, c... 195 4e-48
CP001001_1110(CP001001|pid:none) Methylobacterium radiotolerans ... 195 4e-48
FM954972_638(FM954972|pid:none) Vibrio splendidus LGP32 chromoso... 195 4e-48
AE016830_2292(AE016830|pid:none) Enterococcus faecalis V583, com... 194 5e-48
CP000076_283(CP000076|pid:none) Pseudomonas fluorescens Pf-5, co... 193 1e-47
AE005673_3439(AE005673|pid:none) Caulobacter crescentus CB15, co... 193 1e-47
(Q19546) RecName: Full=Probable Werner syndrome ATP-dependent he... 193 1e-47
CP001472_617(CP001472|pid:none) Acidobacterium capsulatum ATCC 5... 192 2e-47
FM178380_11(FM178380|pid:none) Aliivibrio salmonicida LFI1238 ch... 192 3e-47
CP000435_545(CP000435|pid:none) Synechococcus sp. CC9311, comple... 192 3e-47
BA000004_1607(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 192 3e-47
CP000699_1901(CP000699|pid:none) Sphingomonas wittichii RW1, com... 192 3e-47
AP007281_730(AP007281|pid:none) Lactobacillus reuteri JCM 1112 D... 191 4e-47
CP000159_1634(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 191 4e-47
CT971583_542(CT971583|pid:none) Synechococcus WH7803 complete ge... 191 5e-47
CP000510_3211(CP000510|pid:none) Psychromonas ingrahamii 37, com... 191 5e-47
CP000851_2229(CP000851|pid:none) Shewanella pealeana ATCC 700345... 191 5e-47
BX569694_142(BX569694|pid:none) Synechococcus sp. WH8102 complet... 191 7e-47
CP000771_486(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 190 9e-47
BC014735_1(BC014735|pid:none) Mus musculus RecQ protein-like, mR... 190 1e-46
AK148430_1(AK148430|pid:none) Mus musculus B16 F10Y cells cDNA, ... 190 1e-46
CP001280_13(CP001280|pid:none) Methylocella silvestris BL2, comp... 190 1e-46
AB017105_1(AB017105|pid:none) Mus musculus mRNA for DNA helicase... 190 1e-46
(Q9Z129) RecName: Full=ATP-dependent DNA helicase Q1; E... 190 1e-46
CP000554_2152(CP000554|pid:none) Prochlorococcus marinus str. MI... 189 2e-46
AK138325_1(AK138325|pid:none) Mus musculus adult male hypothalam... 189 2e-46
AK137589_1(AK137589|pid:none) Mus musculus adult male bone cDNA,... 189 2e-46
BX548175_212(BX548175|pid:none) Prochlorococcus marinus MIT9313 ... 189 3e-46
CP000503_1969(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 188 3e-46
CP000661_17(CP000661|pid:none) Rhodobacter sphaeroides ATCC 1702... 188 3e-46
AE016853_5279(AE016853|pid:none) Pseudomonas syringae pv. tomato... 188 4e-46
CP001615_2954(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 187 6e-46
CR382132_709(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 187 6e-46
CR954247_117(CR954247|pid:none) Pseudoalteromonas haloplanktis s... 187 6e-46
CP000267_399(CP000267|pid:none) Rhodoferax ferrireducens T118, c... 187 6e-46
CP001150_2758(CP001150|pid:none) Rhodobacter sphaeroides KD131 c... 187 8e-46
CP000143_2971(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 187 8e-46
CP000097_1823(CP000097|pid:none) Synechococcus sp. CC9902, compl... 187 8e-46
CP000577_27(CP000577|pid:none) Rhodobacter sphaeroides ATCC 1702... 187 8e-46
BC170790_1(BC170790|pid:none) Xenopus tropicalis RecQ protein-li... 187 8e-46
CP001322_3762(CP001322|pid:none) Desulfatibacillum alkenivorans ... 187 1e-45
AK073504_1(AK073504|pid:none) Oryza sativa Japonica Group cDNA c... 186 2e-45
CP000909_2003(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 186 2e-45
AE014187_276(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 185 3e-45
BC126495_1(BC126495|pid:none) Bos taurus RecQ protein-like (DNA ... 185 3e-45
BA000031_2341(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 184 5e-45
CP000927_4192(CP000927|pid:none) Caulobacter sp. K31, complete g... 184 6e-45
AE017333_2328(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 184 6e-45
CP000031_108(CP000031|pid:none) Ruegeria pomeroyi DSS-3, complet... 184 8e-45
CP000830_3318(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 183 1e-44
AP008955_2427(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 182 2e-44
AL662946_2(AL662946|pid:none) Oryza sativa genomic DNA, chromoso... 182 2e-44
CP000512_3928(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 182 2e-44
CP000377_2658(CP000377|pid:none) Silicibacter sp. TM1040, comple... 182 3e-44
AP006618_299(AP006618|pid:none) Nocardia farcinica IFM 10152 DNA... 182 3e-44
AB2411(AB2411) ATP-dependent DNA helicase [imported] - Nostoc sp... 181 4e-44
CP000075_4947(CP000075|pid:none) Pseudomonas syringae pv. syring... 181 5e-44
CP001160_382(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 181 7e-44
CP000749_2207(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 181 7e-44
CP000891_2363(CP000891|pid:none) Shewanella baltica OS195, compl... 181 7e-44
CP000753_2225(CP000753|pid:none) Shewanella baltica OS185, compl... 181 7e-44
AM910995_206(AM910995|pid:none) Plasmodium knowlesi strain H chr... 181 7e-44
CP001291_1014(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 180 1e-43
DQ489736_69(DQ489736|pid:none) Leuconostoc citreum KM20, complet... 180 1e-43
CP000473_723(CP000473|pid:none) Solibacter usitatus Ellin6076, c... 179 2e-43
CP000348_2480(CP000348|pid:none) Leptospira borgpetersenii serov... 179 3e-43
AJ421618_1(AJ421618|pid:none) Arabidopsis thaliana mRNA for heli... 179 3e-43
CP000961_2270(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 178 3e-43
CP000444_2012(CP000444|pid:none) Shewanella sp. MR-7, complete g... 177 6e-43
CP001038_156(CP001038|pid:none) Nostoc punctiforme PCC 73102 pla... 177 6e-43
AF091216_1(AF091216|pid:none) Mus musculus Wrn protein (Wrn) gen... 177 6e-43
AK171490_1(AK171490|pid:none) Mus musculus B6-derived CD11 +ve d... 177 6e-43
CP001344_2545(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 177 8e-43
CP000828_5026(CP000828|pid:none) Acaryochloris marina MBIC11017,... 177 8e-43
CP000583_168(CP000583|pid:none) Ostreococcus lucimarinus CCE9901... 177 1e-42
FM177140_1545(FM177140|pid:none) Lactobacillus casei BL23 comple... 176 1e-42
AB179177_1(AB179177|pid:none) Macaca fascicularis testis cDNA cl... 176 1e-42
(O09053) RecName: Full=Werner syndrome ATP-dependent helicase ho... 176 2e-42
AF241636_1(AF241636|pid:none) Mus musculus WRN protein (Wrn) mRN... 176 2e-42
D86526_1(D86526|pid:none) Mus musculus WRN typeI gene, complete ... 176 2e-42
AP004257_4(AP004257|pid:none) Oryza sativa Japonica Group genomi... 176 2e-42
CP000817_1852(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 176 2e-42
AE014299_2327(AE014299|pid:none) Shewanella oneidensis MR-1, com... 176 2e-42
CP000117_2109(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 175 3e-42
CP000806_2135(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 175 3e-42
CP000158_537(CP000158|pid:none) Hyphomonas neptunium ATCC 15444,... 175 3e-42
CP000750_825(CP000750|pid:none) Kineococcus radiotolerans SRS302... 175 3e-42
AM711867_27(AM711867|pid:none) Clavibacter michiganensis subsp. ... 174 7e-42
CP000447_1907(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 174 7e-42
CR954205_429(CR954205|pid:none) Ostreococcus tauri strain OTTH05... 174 9e-42
CP001213_1079(CP001213|pid:none) Bifidobacterium animalis subsp.... 173 1e-41
CP000021_1163(CP000021|pid:none) Vibrio fischeri ES114 chromosom... 173 1e-41
AE015929_1170(AE015929|pid:none) Staphylococcus epidermidis ATCC... 173 1e-41
CU694391_159(CU694391|pid:none) Ralstonia solanacearum strain Mo... 173 1e-41
CP000749_1441(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 172 3e-41
CT573213_714(CT573213|pid:none) Frankia alni str. ACN14A chromos... 172 3e-41
CR857790_1(CR857790|pid:none) Pongo abelii mRNA; cDNA DKFZp459L2... 171 4e-41
AY442327_1(AY442327|pid:none) Homo sapiens Werner syndrome (WRN)... 171 6e-41
FM242711_1928(FM242711|pid:none) Listeria monocytogenes Clip8145... 171 7e-41
CP000233_889(CP000233|pid:none) Lactobacillus salivarius UCC118,... 170 1e-40
CP000875_4532(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 170 1e-40
AM295250_1106(AM295250|pid:none) Staphylococcus carnosus subsp. ... 170 1e-40
CP000416_740(CP000416|pid:none) Lactobacillus brevis ATCC 367, c... 170 1e-40
CP001175_603(CP001175|pid:none) Listeria monocytogenes HCC23, co... 169 2e-40
AE017262_1951(AE017262|pid:none) Listeria monocytogenes str. 4b ... 169 2e-40
AM270070_32(AM270070|pid:none) Aspergillus niger contig An04c009... 169 3e-40
AJ271844_1(AJ271844|pid:none) Aspergillus nidulans recQ gene for... 169 3e-40
CP000352_3314(CP000352|pid:none) Ralstonia metallidurans CH34, c... 168 4e-40
CP001329_497(CP001329|pid:none) Micromonas sp. RCC299 chromosome... 168 4e-40
CP001071_1054(CP001071|pid:none) Akkermansia muciniphila ATCC BA... 167 6e-40
T16536(T16536)hypothetical protein K02F3.1 - Caenorhabditis eleg... 167 1e-39
AF1317(AF1317) ATP-dependent DNA helicase homolog recS [imported... 166 1e-39
CP000246_312(CP000246|pid:none) Clostridium perfringens ATCC 131... 166 2e-39
CP000312_306(CP000312|pid:none) Clostridium perfringens SM101, c... 165 3e-39
CP000903_1385(CP000903|pid:none) Bacillus weihenstephanensis KBA... 165 4e-39
AE016830_1447(AE016830|pid:none) Enterococcus faecalis V583, com... 165 4e-39
AM849034_31(AM849034|pid:none) Clavibacter michiganensis subsp. ... 164 5e-39
CP001326_340(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 164 7e-39
A86404(A86404)probable protein ATP-dependent DNA helicase RecQ [... 163 2e-38
CP000764_1154(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 162 3e-38
CR954205_59(CR954205|pid:none) Ostreococcus tauri strain OTTH059... 162 3e-38
AE017343_443(AE017343|pid:none) Cryptococcus neoformans var. neo... 162 3e-38
CP000239_2497(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 162 3e-38
CP000001_1346(CP000001|pid:none) Bacillus cereus E33L, complete ... 161 4e-38
CP001186_1372(CP001186|pid:none) Bacillus cereus G9842, complete... 161 6e-38
CP000931_2205(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 161 6e-38
AE017355_1341(AE017355|pid:none) Bacillus thuringiensis serovar ... 161 6e-38
AP008934_1265(AP008934|pid:none) Staphylococcus saprophyticus su... 160 1e-37
CP001341_1000(CP001341|pid:none) Arthrobacter chlorophenolicus A... 160 1e-37
AE016877_1355(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 160 1e-37
AM920437_1843(AM920437|pid:none) Penicillium chrysogenum Wiscons... 159 2e-37
CP001176_1410(CP001176|pid:none) Bacillus cereus B4264, complete... 159 2e-37
AE016879_1385(AE016879|pid:none) Bacillus anthracis str. Ames, c... 159 2e-37
CP000485_1262(CP000485|pid:none) Bacillus thuringiensis str. Al ... 159 2e-37
CP000474_907(CP000474|pid:none) Arthrobacter aurescens TC1, comp... 159 3e-37
AP006716_1430(AP006716|pid:none) Staphylococcus haemolyticus JCS... 158 4e-37
CP001283_1490(CP001283|pid:none) Bacillus cereus AH820, complete... 158 4e-37
CP000240_651(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-13... 158 5e-37
CP000584_44(CP000584|pid:none) Ostreococcus lucimarinus CCE9901 ... 158 5e-37
BT032859_1(BT032859|pid:none) Drosophila melanogaster RE21659 fu... 157 6e-37
AE014296_2551(AE014296|pid:none) Drosophila melanogaster chromos... 157 6e-37
BX284749_12(BX284749|pid:none) Neurospora crassa DNA linkage gro... 157 8e-37
AP009552_3961(AP009552|pid:none) Microcystis aeruginosa NIES-843... 157 8e-37
(O94762) RecName: Full=ATP-dependent DNA helicase Q5; E... 156 1e-36
EF560729_1(EF560729|pid:none) Homo sapiens clone DKFZp686F07249 ... 156 1e-36
AK304168_1(AK304168|pid:none) Homo sapiens cDNA FLJ61700 complet... 156 1e-36
CR860710_1(CR860710|pid:none) Pongo abelii mRNA; cDNA DKFZp459N0... 156 2e-36
CP001053_2281(CP001053|pid:none) Burkholderia phytofirmans PsJN ... 155 2e-36
BX571856_1460(BX571856|pid:none) Staphylococcus aureus subsp. au... 155 4e-36
AJ938182_1344(AJ938182|pid:none) Staphylococcus aureus RF122 com... 155 4e-36
AB042825_1(AB042825|pid:none) Homo sapiens RECQL5 gamma mRNA for... 154 9e-36
BC172840_1(BC172840|pid:none) Synthetic construct Homo sapiens c... 153 1e-35
CP000393_1321(CP000393|pid:none) Trichodesmium erythraeum IMS101... 153 2e-35
AP008231_252(AP008231|pid:none) Synechococcus elongatus PCC 6301... 152 3e-35
CP000100_1299(CP000100|pid:none) Synechococcus elongatus PCC 794... 152 3e-35
CP000362_3293(CP000362|pid:none) Roseobacter denitrificans OCh 1... 152 4e-35
AK075084_1(AK075084|pid:none) Homo sapiens cDNA FLJ90603 fis, cl... 151 5e-35
CP001141_284(CP001141|pid:none) Phaeodactylum tricornutum CCAP 1... 149 2e-34

>AC134322_1(AC134322|pid:none) Medicago truncatula clone mth2-17i21,
complete sequence.
Length = 1159

Score = 301 bits (771), Expect = 4e-80
Identities = 164/459 (35%), Positives = 254/459 (55%), Gaps = 50/459 (10%)
Frame = +3

Query: 12 WHELVETCNRDIFGNKEFRNLQIEAINSILHDRDTFVSLPTGGGKSLCFQIPSIVDHRGV 191
W + +E N+ +FGN FR Q E IN+ + D FV +PTGGGKSL +Q+P++++ G+
Sbjct: 392 WTKELEVNNKKVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALINP-GI 450

Query: 192 TFVISPLLALMQDQVHKLKSLGIPAESINSSGSQRENRDVLDQLLNGETCKLKLIYITPE 371
T VISPL++L+QDQ+ L IPA ++++ E +++L +L N + CK KL+Y+TPE
Sbjct: 451 TLVISPLVSLIQDQIMHLLQANIPAAYLSANLEWAEQQEILREL-NSDYCKYKLLYVTPE 509

Query: 372 RLAQSE-FLHLLDQLYDQGRLRRLVVDEAHCISEWGHSFRPKYRLISTFRDRFPSVPISA 548
++A+S+ L L+ L+ + L R+V+DEAHC+S+WGH FRP Y+ + + +FP+ P+ A
Sbjct: 510 KVARSDVLLRQLESLHGRELLSRIVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNTPVLA 569

Query: 549 FTASATSNVEIDIKNSLKMVNPITINSSFLRPNLLY------------------------ 656
TA+AT++V+ D+ +L +VN + SF RPNL Y
Sbjct: 570 LTATATASVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIRENHFDE 629

Query: 657 -----------------------XXXXFYHAKLSNTQRSKLQKDWTNGEFKIVCTTIAFG 767
FYH + QR+ +Q+ W+ E I+C T+AFG
Sbjct: 630 CGIIYCLSRMDCEKVAEKLQECGHKCAFYHGSMDPDQRAHVQRQWSKDEINIICATVAFG 689

Query: 768 MGIDKGDTRFVIHHSMPQSMESYYQQTGRAGRDGKHSDCLLFYNKSDLMRFKHIISLNQP 947
MGI+K D RFVIHHS+P+S+E Y+Q+ GRAGRDG+ S C+L+Y+ SD +R KH++S+
Sbjct: 690 MGINKPDVRFVIHHSLPKSVEGYHQECGRAGRDGQRSSCVLYYSYSDYIRVKHMLSVGAV 749

Query: 948 KDPFNAFSNYNGVGIGDIGGEHLILDNDGNYISNYSSDESQYMDTIKNKIQQTSTKLEML 1127
+ SN +S S++ T ++ +T+T E L
Sbjct: 750 EQ------------------------------SNMTSGYSRFNATNSGRLLETNT--ENL 777

Query: 1128 DSVASFCSTQSKCRRVTLLNYFGE--NSKSCGNMCDICI 1238
+ S+C CRR+ L +FGE +S +C CD C+
Sbjct: 778 LRMVSYCENDVDCRRLIQLVHFGEKFDSSNCHKTCDNCV 816

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,031,532,437
Number of extensions: 39557538
Number of successful extensions: 120398
Number of sequences better than 10.0: 3338
Number of HSP's gapped: 118484
Number of HSP's successfully gapped: 4292
Length of query: 454
Length of database: 1,040,966,779
Length adjustment: 132
Effective length of query: 322
Effective length of database: 618,001,159
Effective search space: 198996373198
Effective search space used: 198996373198
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.45 alm: 0.39 top: 0.53 tms: 0.00 mit: 0.29 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: cytoplasmic
40.0 %: nuclear
4.0 %: cytoskeletal
4.0 %: mitochondrial
4.0 %: peroxisomal

>> prediction for Contig-U08900-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 1
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0