Contig-U08861-1
Contig ID Contig-U08861-1
Contig update 2002. 9.13
Contig sequence
>Contig-U08861-1 (Contig-U08861-1Q) /CSM_Contig/Contig-U08861-1Q.Seq.d
GTTTAAAATATATTTTTATTAAACACTAAAATAATAATAGTAAAAATAAT
ATTAATAATGAATAGAATACCTTCATTAAAATTATTTAATAGAGCATTAA
AATTTAAAGATAGAACATCAATTATAAATTATCCAAATAATAATACTCAA
AGATATACCTACAATGATTTATTAAATGAATCACAATCAATTGCTAATAT
TTTAAATTTTAAAAAAAAAGATTTAGAACAACAAAGAGTTGCATATTTTT
TTGGACAAAATTTTGATTATGTAAGAAGTCAATGGGGTATTTGGGCAGCA
GGAGGTACAGCAGTACCTTTAGCATTATCACATCCAATTCATGAATTACA
ATATACAATTGAGAATTCAAAGAGTTCAATGATTTTAACCAATTCAGAAA
ACTATTCAAAAATGAAAGAGATTGGAACCAATTTAAATATACCAGTGATT
GAAATACCAAAAGTTGGTGAATATACAATTCCCAAATCACAATGGTCATC
AATGGAAGATTATAAACAATATTCAATCGACTCGAATAGAAATGCATTAA
TAATCTATACAAGTGGTATAACATCAAAACCAAAAGGGAGTTGTGACAAC
ACATGCTAATATTGAAGCACAAATTCAAACATTGGT----------TTAG
AACGTTATGGTATGACCGAAATTGGTATGGCACTTTCAAATCCATTAAAA
GTTAATGAAAGAATTGGTGGTACTGTTGGTTTCCCTTTACCTGGTGTTCA
AATTAAAATTCAACCAGAATTAAATAATGATGATAATCAAAATAATAATC
AAAATAATAATGATAATAATAATAATAAGGAAGTTGGTGAATTATTAGTT
AAAGGACCACAAGTTTTTAAAGAATATTTTGAAAAAAGAAAAGCAACTGA
AGAGGCATTTACTGATGATGGTTGGTTTAAAACTGGTGATATCGTTGAGA
AGGATTTGTCAACTGGTAGATTGAAAATTTTAGGTAGATCAAGTGTTGAT
ATTATTAAACGTGGTGGTTTCAAAATTAGTGCACTTGAAATTGAAAGAGA
AATCTTGGATATGGATCCAAATATTCAAGAATGTGCTGTACTTGGTTTAC
CAAATGATGAATATGGTCAAGATATTGCTGCAATCATTGTTTATAAAAAA
AGCAAAAAACAACCAATGAGTTTTGAAGAATTTAAAACCAATTGTAAACA
AAGATTAGCACATTATAAAGTACCAAATAAGTTATTAATTTTAGAAAATA
AATTCCAAAGAATGCAATGTCTAAAGTTAATAAAAAAGAATACTAAAATA
TTTTC

Gap gap included
Contig length 1295
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 2877914
End point 2879217
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 2
Link to clone list U08861
List of clone(s)

est1=AFN551F,1,637
est2=AFN551Z,638,1297
Translated Amino Acid sequence
fkiyfy*tlk****k*y***ieylh*nylieh*nlkiehql*iiqiiilkdiptmiy*mn
hnqllif*ilkkki*nnkelhifldkilim*evngvfgqqevqqyl*hyhiqfmnyniql
riqrvq*f*piqktiqk*krlepi*iyq*lkyqklvniqfpnhnghqwkiinniqstrie
mh**siqvv*HQNQKGVVTTHANIEAQIQTL---

---LERYGMTEIGMALSNPLKVNERIGGTVGFPLPGVQIKIQPELNNDDNQNNNQNNNDN
NNNKEVGELLVKGPQVFKEYFEKRKATEEAFTDDGWFKTGDIVEKDLSTGRLKILGRSSV
DIIKRGGFKISALEIEREILDMDPNIQECAVLGLPNDEYGQDIAAIIVYKKSKKQPMSFE
EFKTNCKQRLAHYKVPNKLLILENKFQRMQCLKLIKKNTKIF


Translated Amino Acid sequence (All Frames)
Frame A:
v*nifllntkiiivkiilimnripslklfnralkfkdrtsiinypnnntqrytyndllne
sqsianilnfkkkdleqqrvayffgqnfdyvrsqwgiwaaggtavplalshpihelqyti
enskssmiltnsenyskmkeigtnlnipvieipkvgeytipksqwssmedykqysidsnr
naliiytsgitskpkgscdntc*y*stnsnig---

---LERYGMTEIGMALSNPLKVNERIGGTVGFPLPGVQIKIQPELNNDDNQNNNQNNNDN
NNNKEVGELLVKGPQVFKEYFEKRKATEEAFTDDGWFKTGDIVEKDLSTGRLKILGRSSV
DIIKRGGFKISALEIEREILDMDPNIQECAVLGLPNDEYGQDIAAIIVYKKSKKQPMSFE
EFKTNCKQRLAHYKVPNKLLILENKFQRMQCLKLIKKNTKIF

Frame B:
fkiyfy*tlk****k*y***ieylh*nylieh*nlkiehql*iiqiiilkdiptmiy*mn
hnqllif*ilkkki*nnkelhifldkilim*evngvfgqqevqqyl*hyhiqfmnyniql
riqrvq*f*piqktiqk*krlepi*iyq*lkyqklvniqfpnhnghqwkiinniqstrie
mh**siqvv*HQNQKGVVTTHANIEAQIQTL---

---*nvmv*pklvwhfqih*klmkelvvllvslylvfklkfnqn*immiikiiikiimii
iiirklvny*lkdhkflknilkkekqlkrhllmmvglklvislrricqlvd*kf*vdqvl
illnvvvsklvhlklkekswiwiqifknvlylvyqmmnmvkillqslfikkaknnq*vlk
nlkpivnkd*hiikyqisy*f*kinskecnv*s**krilkyf

Frame C:
lkyifikh*nnnsknninne*ntfikii**siki*r*ninyklsk**yskiylq*fik*i
tinc*yfkf*kkrfrttksciffwtkf*lckksmgylgsrrysstfsiitsns*itiyn*
efkefndfnqfrklfknerdwnqfkytsd*ntksw*iynsqitmvingrl*tifnrle*k
cinnlykwyniktkrel*qhmlilkhkfkhw---

---rtlwydrnwygtfksiks**knwwycwfpftwcsn*nstrik****sk**sk*****
***gsw*iis*rttsf*rif*kkksn*rgiy**wlv*nw*yr*egfvnw*ienfr*ikc*
yy*twwfqn*ct*n*krnlgygskysrmcctwftk**iwsryccnhcl*kkqkttnef*r
i*nql*tkistl*stk*vinfrk*ipknamskvnkkey*nif

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U08861-1 (Contig-U08861-1Q)
/CSM_Contig/Contig-U08861-1Q.Seq.d
(1305 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U08861-1 (Contig-U08861-1Q) /CSM_Contig/Conti... 1185 0.0
Contig-U11710-1 (Contig-U11710-1Q) /CSM_Contig/Conti... 46 1e-04
Contig-U10878-1 (Contig-U10878-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U08780-1 (Contig-U08780-1Q) /CSM_Contig/Conti... 38 0.023
Contig-U13593-1 (Contig-U13593-1Q) /CSM_Contig/Conti... 36 0.092
Contig-U13383-1 (Contig-U13383-1Q) /CSM_Contig/Conti... 36 0.092
Contig-U12062-1 (Contig-U12062-1Q) /CSM_Contig/Conti... 36 0.092
Contig-U11418-1 (Contig-U11418-1Q) /CSM_Contig/Conti... 36 0.092
Contig-U10398-1 (Contig-U10398-1Q) /CSM_Contig/Conti... 36 0.092
Contig-U10350-1 (Contig-U10350-1Q) /CSM_Contig/Conti... 36 0.092

>Contig-U08861-1 (Contig-U08861-1Q) /CSM_Contig/Contig-U08861-1Q.Seq.d
Length = 1305

Score = 1185 bits (598), Expect = 0.0
Identities = 660/676 (97%)
Strand = Plus / Plus


Query: 92 gagcattaaaatttaaagatagaacatcaattataaattatccaaataataatactcaaa 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 gagcattaaaatttaaagatagaacatcaattataaattatccaaataataatactcaaa 151


Query: 152 gatatacctacaatgatttattaaatgaatcacaatcaattgctaatattttaaattttn 211
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 gatatacctacaatgatttattaaatgaatcacaatcaattgctaatattttaaatttta 211


Query: 212 nnnnnnnngatttagaacaacaaagagttgcatannnnnnnggacaaaattttgattatg 271
|||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 212 aaaaaaaagatttagaacaacaaagagttgcatatttttttggacaaaattttgattatg 271


Query: 272 taagaagtcaatggggtatttgggcagcaggaggtacagcagtacctttagcattatcac 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 taagaagtcaatggggtatttgggcagcaggaggtacagcagtacctttagcattatcac 331


Query: 332 atccaattcatgaattacaatatacaattgagaattcaaagagttcaatgattttaacca 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 atccaattcatgaattacaatatacaattgagaattcaaagagttcaatgattttaacca 391


Query: 392 attcagaaaactattcaaaaatgaaagagattggaaccaatttaaatataccagtgattg 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 attcagaaaactattcaaaaatgaaagagattggaaccaatttaaatataccagtgattg 451


Query: 452 aaataccaaaagttggtgaatatacaattcccaaatcacaatggtcatcaatggaagatt 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 aaataccaaaagttggtgaatatacaattcccaaatcacaatggtcatcaatggaagatt 511


Query: 512 ataaacaatattcaatcgactcgaatagaaatgcattaataatctatacaagtggtataa 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ataaacaatattcaatcgactcgaatagaaatgcattaataatctatacaagtggtataa 571


Query: 572 catcaaaaccaaaagggagttgtgacaacacatgctaatattgaagcacaaattcaaaca 631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 catcaaaaccaaaagggagttgtgacaacacatgctaatattgaagcacaaattcaaaca 631


Query: 632 ttggtnnnnnnnnnnttagaacgttatggtatgaccgaaattggtatggcactttcaaat 691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ttggtnnnnnnnnnnttagaacgttatggtatgaccgaaattggtatggcactttcaaat 691


Query: 692 ccattaaaagttaatgaaagaattggtggtactgttggtttccctttacctggtgttcaa 751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ccattaaaagttaatgaaagaattggtggtactgttggtttccctttacctggtgttcaa 751


Query: 752 attaaaattcaaccag 767
||||||||||||||||
Sbjct: 752 attaaaattcaaccag 767


Score = 626 bits (316), Expect = e-179
Identities = 316/316 (100%)
Strand = Plus / Plus


Query: 829 ggaagttggtgaattattagttaaaggaccacaagtttttaaagaatattttgaaaaaag 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 ggaagttggtgaattattagttaaaggaccacaagtttttaaagaatattttgaaaaaag 888


Query: 889 aaaagcaactgaagaggcatttactgatgatggttggtttaaaactggtgatatcgttga 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 aaaagcaactgaagaggcatttactgatgatggttggtttaaaactggtgatatcgttga 948


Query: 949 gaaggatttgtcaactggtagattgaaaattttaggtagatcaagtgttgatattattaa 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 gaaggatttgtcaactggtagattgaaaattttaggtagatcaagtgttgatattattaa 1008


Query: 1009 acgtggtggtttcaaaattagtgcacttgaaattgaaagagaaatcttggatatggatcc 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 acgtggtggtttcaaaattagtgcacttgaaattgaaagagaaatcttggatatggatcc 1068


Query: 1069 aaatattcaagaatgtgctgtacttggtttaccaaatgatgaatatggtcaagatattgc 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1069 aaatattcaagaatgtgctgtacttggtttaccaaatgatgaatatggtcaagatattgc 1128


Query: 1129 tgcaatcattgtttat 1144
||||||||||||||||
Sbjct: 1129 tgcaatcattgtttat 1144


Score = 289 bits (146), Expect = 4e-78
Identities = 146/146 (100%)
Strand = Plus / Plus


Query: 1160 caaccaatgagttttgaagaatttaaaaccaattgtaaacaaagattagcacattataaa 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1160 caaccaatgagttttgaagaatttaaaaccaattgtaaacaaagattagcacattataaa 1219


Query: 1220 gtaccaaataagttattaattttagaaaataaattccaaagaatgcaatgtctaaagtta 1279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1220 gtaccaaataagttattaattttagaaaataaattccaaagaatgcaatgtctaaagtta 1279


Query: 1280 ataaaaaagaatactaaaatattttc 1305
||||||||||||||||||||||||||
Sbjct: 1280 ataaaaaagaatactaaaatattttc 1305


>Contig-U11710-1 (Contig-U11710-1Q) /CSM_Contig/Contig-U11710-1Q.Seq.d
Length = 1756

Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Plus


Query: 919 tggttggtttaaaactggtgatatcgt 945
|||||||||||||||||||||| ||||
Sbjct: 1128 tggttggtttaaaactggtgatgtcgt 1154


>Contig-U10878-1 (Contig-U10878-1Q) /CSM_Contig/Contig-U10878-1Q.Seq.d
Length = 1729

Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus


Query: 859 acaagtttttaaagaatattttgaa 883
|||||||||||||||||| ||||||
Sbjct: 294 acaagtttttaaagaatactttgaa 318


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 23,264
Number of Sequences: 6905
Number of extensions: 23264
Number of successful extensions: 2334
Number of sequences better than 10.0: 250
length of query: 1305
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1289
effective length of database: 5,564,391
effective search space: 7172499999
effective search space used: 7172499999
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.13
Homology vs DNA
Query= Contig-U08861-1 (Contig-U08861-1Q) /CSM_Contig/Contig-U08861-1Q.Seq.d
(1305 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ345701) Dictyostelium discoideum cDNA clone:dda28e13, 3' ... 626 0.0 3
(BJ328534) Dictyostelium discoideum cDNA clone:dda28e13, 5' ... 761 0.0 3
(FE237516) CAPG4412.rev CAPG Naegleria gruberi amoeba stage ... 32 0.001 4
(FE240333) CAPG5801.rev CAPG Naegleria gruberi amoeba stage ... 32 0.001 4
(AR548658) Sequence 3789 from patent US 6747137. 56 0.003 1
(CP000937) Francisella philomiragia subsp. philomiragia ATCC... 54 0.014 1
(CX580253) TTE00024236 Amplicon Express - Conjugative Form T... 52 0.017 2
(CV529986) ALV_012B_F06 Phaseolus vulgaris leaf EST library ... 40 0.035 3
(FE900062) PvEST5924 Bean pod tissue cDNA Entry Library Phas... 40 0.036 3
(CA847676) EST0584 tepary bean Root cDNA Phaseolus acutifoli... 40 0.036 3
(FE693787) Pv016D_M13F_B08.ab1 Phaseolus vulgaris cv Early g... 40 0.047 3
(BD455614) Listeria monocytogenes genome,polypeptides and uses. 52 0.054 1
(AX641669) Sequence 2859 from Patent WO0101118. 52 0.054 1
(CR628311) Human DNA sequence from clone XX-NCIH2171_5AD01. 52 0.054 1
(AC024382) Homo sapiens chromosome 8, clone RP11-351C8, comp... 52 0.054 1
(EK046131) 1092959551727 Global-Ocean-Sampling_GS-31-01-01-1... 52 0.054 1
(EK007326) 1092955116687 Global-Ocean-Sampling_GS-31-01-01-1... 52 0.054 1
(CK104146) I017P05.5pR Populus senescing leaves cDNA library... 52 0.054 1
(AL591980) Listeria monocytogenes strain EGD, complete genom... 52 0.054 1
(BD426631) The Nucleotide Sequence of the Haemophilus influe... 38 0.11 2
(AR632719) Sequence 1 from patent US 6846651. 38 0.11 2
(AR274513) Sequence 1 from patent US 6506581. 38 0.11 2
(L42023) Haemophilus influenzae Rd KW20, complete genome. 38 0.11 2
(CP000671) Haemophilus influenzae PittEE, complete genome. 38 0.11 2
(BD425888) The Nucleotide Sequence of the Haemophilus influe... 38 0.16 2
(DU490062) 1098415533130 CHORI-243 Ovis aries genomic clone ... 36 0.16 2
(AC137985) Medicago truncatula clone mth2-14m10, complete se... 40 0.17 7
(AZ982870) 2M0263O13R Mouse 10kb plasmid UUGC2M library Mus ... 38 0.19 2
(CU576536) M.truncatula DNA sequence from clone MTH2-166E15 ... 40 0.20 7
(AM433771) Vitis vinifera contig VV78X254535.3, whole genome... 36 0.20 4
(AC146853) Medicago truncatula clone mth2-66c24, WORKING DRA... 50 0.21 1
(AC172660) Bos taurus clone CH240-255G11, WORKING DRAFT SEQU... 50 0.21 1
(ER624903) 1093017565825 Global-Ocean-Sampling_GS-36-01-01-2... 50 0.21 1
(CW900538) RPCI42_136L8.TV RPCI-42 Bos taurus genomic clone ... 50 0.21 1
(EL352298) CCEL8925.b1_I23.ab1 CCE(LMS) endive Cichorium end... 50 0.21 1
(CP000942) Ureaplasma parvum serovar 3 str. ATCC 27815, comp... 42 0.35 19
(EU038215) Neisseria meningitidis strain 2004-038 CtrD (ctrD... 34 0.39 4
(AC108248) Rattus norvegicus clone CH230-27K18, *** SEQUENCI... 38 0.45 2
(AC106125) Rattus norvegicus clone CH230-119G20, *** SEQUENC... 34 0.46 2
(AE017308) Mycoplasma mobile 163K complete genome. 36 0.52 19
(AM634826) Entamoeba dispar GSS, clone dispar128e05.p1k. 34 0.61 2
(AL034557) Plasmodium falciparum MAL4P1. 48 0.84 1
(AL010254) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 48 0.84 1
(AL109947) Human DNA sequence from clone RP5-919F19 on chrom... 48 0.84 1
(AJ342132) Homo sapiens genomic sequence surrounding NotI si... 48 0.84 1
(AC130624) Rattus norvegicus clone CH230-146B6, WORKING DRAF... 48 0.84 1
(AC123014) Rattus norvegicus clone CH230-150E3, WORKING DRAF... 48 0.84 1
(AC098339) Rattus norvegicus clone CH230-2A16, *** SEQUENCIN... 48 0.84 1
(CU914454) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.84 1
(AC018536) Homo sapiens clone RP11-11G3, LOW-PASS SEQUENCE S... 48 0.84 1
(ET558546) fcg3x.606650d06 C. graminicola genomic sequence G... 48 0.84 1
(ET543679) fcg3x.226850h23.f C. graminicola genomic sequence... 48 0.84 1
(ET500977) fcg2x.pk534.b6.f C. graminicola genomic sequence ... 48 0.84 1
(ET061820) MUGQ_CH252P358D19T7_CP673_078 CHORI-252 Vervet Mo... 48 0.84 1
(EK154480) 1095456067791 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.84 1
(EJ616778) 1092963024022 Global-Ocean-Sampling_GS-29-01-01-1... 48 0.84 1
(EJ408512) 1093012114776 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.84 1
(EJ395259) 1093011993766 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.84 1
(EJ271670) 1095353019367 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.84 1
(ED455714) AUAC-aay35c09.b1 Ascaris suum whole genome shotgu... 48 0.84 1
(CU299461) Equus caballus GSS, BAC clone CH241-466A5, T7 end... 48 0.84 1
(EY259067) BF01031A2D02.f1 Normalized subtracted keck librar... 48 0.84 1
(EK248449) 1095460267525 Global-Ocean-Sampling_GS-31-01-01-1... 40 1.5 3
(EA394952) Sequence 43776 from patent US 7314974. 36 1.6 2
(AL929451) Mouse DNA sequence from clone RP23-300D11 on chro... 44 2.1 3
(AL359392) Human DNA sequence from clone RP11-332E3 on chrom... 46 2.2 2
(EJ838338) 1093017814990 Global-Ocean-Sampling_GS-30-02-01-1... 36 2.3 3
(EJ926267) 1093018782889 Global-Ocean-Sampling_GS-30-02-01-1... 36 2.4 3
(DR690394) EST1080480 Normalized pine embryo library, Lib_D ... 36 2.4 3
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 34 2.7 9
(EK006518) 1092955099857 Global-Ocean-Sampling_GS-31-01-01-1... 40 2.9 2
(EA275289) Sequence 182 from patent US 7256323. 40 3.3 4
(BX571706) Zebrafish DNA sequence from clone DKEYP-123H11 in... 46 3.3 1
(CU691277) Synthetic construct Homo sapiens gateway clone IM... 46 3.3 1
(AM474816) Vitis vinifera, whole genome shotgun sequence, co... 46 3.3 1
(AC126011) Medicago truncatula clone mth2-24f16, complete se... 46 3.3 1
(AC099567) Homo sapiens chromosome 1 clone RP5-936J12, compl... 46 3.3 1
(AC119517) Rattus norvegicus clone CH230-241O9, *** SEQUENCI... 46 3.3 1
(CU607096) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.3 1
(AC079629) Homo sapiens chromosome 3 clone RP11-69J10, WORKI... 46 3.3 1
(CU457717) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.3 1
(CU407174) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 3.3 1
(AC230770) Bos taurus clone CH240-499M3, WORKING DRAFT SEQUE... 46 3.3 1
(AC202327) Medicago truncatula clone mth2-166j3, WORKING DRA... 46 3.3 1
(AC190466) Papio anubis clone RP41-450B2, WORKING DRAFT SEQU... 46 3.3 1
(ER550326) 1093016219779 Global-Ocean-Sampling_GS-35-01-01-1... 46 3.3 1
(ER460978) 1092963893273 Global-Ocean-Sampling_GS-35-01-01-1... 46 3.3 1
(EK477585) 1095469494994 Global-Ocean-Sampling_GS-32-01-01-1... 46 3.3 1
(EJ875636) 1093018367484 Global-Ocean-Sampling_GS-30-02-01-1... 46 3.3 1
(EJ785956) 1093017315383 Global-Ocean-Sampling_GS-30-02-01-1... 46 3.3 1
(EJ054786) 1095456020648 Global-Ocean-Sampling_GS-26-01-01-1... 46 3.3 1
(EI893129) VUH1-73D21TV VUUBBa (VUH1) Vigna unguiculata geno... 46 3.3 1
(DU460529) 1098421087879 CHORI-243 Ovis aries genomic clone ... 46 3.3 1
(DV883704) LB02628.CR_D18 GC_BGC-26 Bos taurus cDNA clone IM... 46 3.3 1
(AV146803) Mus musculus 10-11 day embryo cDNA, partial seque... 46 3.3 1
(AU261519) Dictyostelium discoideum vegetative cDNA clone:VS... 46 3.3 1
(CR546772) Pongo abelii mRNA; EST DKFZp470O2424_r1 (from clo... 46 3.3 1
(BY361047) Mus musculus 12 days embryo female mullerian duct... 46 3.3 1
(BJ445791) Dictyostelium discoideum cDNA clone:ddv60l17, 3' ... 46 3.3 1
(BB764845) Mus musculus B16 F10Y cells cDNA, RIKEN full-leng... 46 3.3 1

>(BJ345701) Dictyostelium discoideum cDNA clone:dda28e13, 3' end,
single read.
Length = 660

Score = 626 bits (316), Expect(3) = 0.0
Identities = 316/316 (100%)
Strand = Plus / Minus


Query: 829 ggaagttggtgaattattagttaaaggaccacaagtttttaaagaatattttgaaaaaag 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ggaagttggtgaattattagttaaaggaccacaagtttttaaagaatattttgaaaaaag 419


Query: 889 aaaagcaactgaagaggcatttactgatgatggttggtttaaaactggtgatatcgttga 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aaaagcaactgaagaggcatttactgatgatggttggtttaaaactggtgatatcgttga 359


Query: 949 gaaggatttgtcaactggtagattgaaaattttaggtagatcaagtgttgatattattaa 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gaaggatttgtcaactggtagattgaaaattttaggtagatcaagtgttgatattattaa 299


Query: 1009 acgtggtggtttcaaaattagtgcacttgaaattgaaagagaaatcttggatatggatcc 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 acgtggtggtttcaaaattagtgcacttgaaattgaaagagaaatcttggatatggatcc 239


Query: 1069 aaatattcaagaatgtgctgtacttggtttaccaaatgatgaatatggtcaagatattgc 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 aaatattcaagaatgtgctgtacttggtttaccaaatgatgaatatggtcaagatattgc 179


Query: 1129 tgcaatcattgtttat 1144
||||||||||||||||
Sbjct: 178 tgcaatcattgtttat 163

Score = 289 bits (146), Expect(3) = 0.0
Identities = 146/146 (100%)
Strand = Plus / Minus


Query: 1160 caaccaatgagttttgaagaatttaaaaccaattgtaaacaaagattagcacattataaa 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 caaccaatgagttttgaagaatttaaaaccaattgtaaacaaagattagcacattataaa 88


Query: 1220 gtaccaaataagttattaattttagaaaataaattccaaagaatgcaatgtctaaagtta 1279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 gtaccaaataagttattaattttagaaaataaattccaaagaatgcaatgtctaaagtta 28


Query: 1280 ataaaaaagaatactaaaatattttc 1305
||||||||||||||||||||||||||
Sbjct: 27 ataaaaaagaatactaaaatattttc 2

Score = 200 bits (101), Expect(3) = 0.0
Identities = 101/101 (100%)
Strand = Plus / Minus


Query: 647 ttagaacgttatggtatgaccgaaattggtatggcactttcaaatccattaaaagttaat 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 ttagaacgttatggtatgaccgaaattggtatggcactttcaaatccattaaaagttaat 601


Query: 707 gaaagaattggtggtactgttggtttccctttacctggtgt 747
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gaaagaattggtggtactgttggtttccctttacctggtgt 560

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,450,243,772
Number of extensions: 95894856
Number of successful extensions: 7771171
Number of sequences better than 10.0: 137
Length of query: 1305
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1281
Effective length of database: 97,308,875,965
Effective search space: 124652670111165
Effective search space used: 124652670111165
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.24
Homology vs Protein
Query= Contig-U08861-1 (Contig-U08861-1Q) /CSM_Contig/Contig-U08861-1Q.Seq.d
(1305 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AM270172_9(AM270172|pid:none) Aspergillus niger contig An08c0170... 167 7e-40
CP001037_4150(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 162 3e-38
AM920436_2196(AM920436|pid:none) Penicillium chrysogenum Wiscons... 161 4e-38
AX357503_1(AX357503|pid:none) Sequence 1 from Patent WO0190322. ... 159 2e-37
(Q58DN7) RecName: Full=Acyl-CoA synthetase family member 3, mito... 159 2e-37
(Q4G176) RecName: Full=Acyl-CoA synthetase family member 3, mito... 159 2e-37
(Q3URE1) RecName: Full=Acyl-CoA synthetase family member 3, mito... 159 3e-37
CR954210_167(CR954210|pid:none) Ostreococcus tauri strain OTTH05... 151 3e-37
AY084636_1(AY084636|pid:none) Arabidopsis thaliana clone 113798 ... 154 7e-36
AY250842_1(AY250842|pid:none) Arabidopsis thaliana acyl-activati... 154 7e-36
(Q6GLK6) RecName: Full=Acyl-CoA synthetase family member 3, mito... 154 9e-36
CP000478_294(CP000478|pid:none) Syntrophobacter fumaroxidans MPO... 153 1e-35
BC166077_1(BC166077|pid:none) Xenopus tropicalis hypothetical pr... 152 3e-35
AP003274_15(AP003274|pid:none) Oryza sativa Japonica Group genom... 147 6e-34
AP008207_2590(AP008207|pid:none) Oryza sativa (japonica cultivar... 147 6e-34
AP007175_274(AP007175|pid:none) Aspergillus oryzae RIB40 genomic... 145 3e-33
CU633438_300(CU633438|pid:none) Podospora anserina genomic DNA c... 139 2e-32
BC021611_1(BC021611|pid:none) Mus musculus acyl-CoA synthetase f... 139 3e-31
CP001328_266(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 137 8e-31
CP000590_167(CP000590|pid:none) Ostreococcus lucimarinus CCE9901... 130 1e-30
AE017343_327(AE017343|pid:none) Cryptococcus neoformans var. neo... 131 5e-29
AM920436_1354(AM920436|pid:none) Penicillium chrysogenum Wiscons... 127 6e-29
CP000113_6975(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 127 7e-28
BA000030_5730(BA000030|pid:none) Streptomyces avermitilis MA-468... 127 9e-28
CP000090_648(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 125 3e-27
CP000555_1100(CP000555|pid:none) Methylibium petroleiphilum PM1,... 122 2e-26
AM260479_2902(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 122 2e-26
AP007255_3584(AP007255|pid:none) Magnetospirillum magneticum AMB... 122 2e-26
CP000453_2771(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-... 122 2e-26
CP000774_422(CP000774|pid:none) Parvibaculum lavamentivorans DS-... 122 4e-26
CU633749_2395(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 122 4e-26
AF016449_14(AF016449|pid:none) Caenorhabditis elegans cosmid C50... 121 6e-26
CP000362_1370(CP000362|pid:none) Roseobacter denitrificans OCh 1... 120 1e-25
CP000250_328(CP000250|pid:none) Rhodopseudomonas palustris HaA2,... 120 1e-25
AM420293_3938(AM420293|pid:none) Saccharopolyspora erythraea NRR... 119 2e-25
CP000283_481(CP000283|pid:none) Rhodopseudomonas palustris BisB5... 119 2e-25
AP009384_3298(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 119 3e-25
CP001392_985(CP001392|pid:none) Diaphorobacter sp. TPSY, complet... 119 3e-25
CP000804_550(CP000804|pid:none) Roseiflexus castenholzii DSM 139... 118 4e-25
CP001337_3659(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 118 5e-25
AF118888_1(AF118888|pid:none) Bradyrhizobium japonicum malonyl C... 117 7e-25
AM902716_3285(AM902716|pid:none) Bordetella petrii strain DSM 12... 117 7e-25
CP000267_1889(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 117 9e-25
CP000943_5723(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 117 9e-25
CP000740_85(CP000740|pid:none) Sinorhizobium medicae WSM419 plas... 116 2e-24
BX640428_117(BX640428|pid:none) Bordetella parapertussis strain ... 116 2e-24
CP000539_1059(CP000539|pid:none) Acidovorax sp. JS42, complete g... 116 2e-24
AL583920_210(AL583920|pid:none) Mycobacterium leprae strain TN c... 115 3e-24
CU459003_1467(CU459003|pid:none) Magnetospirillum gryphiswaldens... 115 5e-24
CP000480_4939(CP000480|pid:none) Mycobacterium smegmatis str. MC... 114 6e-24
CP000494_217(CP000494|pid:none) Bradyrhizobium sp. BTAi1, comple... 114 8e-24
AP008957_4178(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 110 8e-24
CP000133_905(CP000133|pid:none) Rhizobium etli CFN 42, complete ... 113 1e-23
CP000613_2274(CP000613|pid:none) Rhodospirillum centenum SW, com... 113 1e-23
CU234118_220(CU234118|pid:none) Bradyrhizobium sp. ORS278,comple... 113 2e-23
CP000390_1576(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 113 2e-23
CP000781_517(CP000781|pid:none) Xanthobacter autotrophicus Py2, ... 112 3e-23
AM236080_1001(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 112 4e-23
CP001074_997(CP001074|pid:none) Rhizobium etli CIAT 652, complet... 112 4e-23
CP000489_1699(CP000489|pid:none) Paracoccus denitrificans PD1222... 111 7e-23
CP000479_1284(CP000479|pid:none) Mycobacterium avium 104, comple... 110 8e-23
AP011115_6016(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 108 1e-22
CP000512_1486(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 110 1e-22
CP000656_2157(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 110 1e-22
CP000874_274(CP000874|pid:none) Rhizobium sp. NGR234 plasmid pNG... 109 2e-22
CP000386_1836(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 109 2e-22
BX572593_222(BX572593|pid:none) Rhodopseudomonas palustris CGA00... 109 2e-22
CP001096_218(CP001096|pid:none) Rhodopseudomonas palustris TIE-1... 109 2e-22
CP001001_1448(CP001001|pid:none) Methylobacterium radiotolerans ... 108 3e-22
CP001191_568(CP001191|pid:none) Rhizobium leguminosarum bv. trif... 108 3e-22
CP000076_4532(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 108 4e-22
CP000032_280(CP000032|pid:none) Ruegeria pomeroyi DSS-3 plasmid ... 107 1e-21
AE004091_3300(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 107 1e-21
AE016853_3999(AE016853|pid:none) Pseudomonas syringae pv. tomato... 106 2e-21
BC072391_1(BC072391|pid:none) Homo sapiens acyl-CoA synthetase f... 103 3e-21
CP001011_221(CP001011|pid:none) Xylella fastidiosa M23, complete... 105 3e-21
AE009442_216(AE009442|pid:none) Xylella fastidiosa Temecula1, co... 105 3e-21
CP000115_2782(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 105 3e-21
AM502246_120(AM502246|pid:none) Leishmania infantum chromosome 28. 105 3e-21
AE003849_287(AE003849|pid:none) Xylella fastidiosa 9a5c, complet... 105 4e-21
CP000662_412(CP000662|pid:none) Rhodobacter sphaeroides ATCC 170... 105 4e-21
CP001029_784(CP001029|pid:none) Methylobacterium populi BJ001, c... 105 5e-21
AM494965_123(AM494965|pid:none) Leishmania braziliensis chromoso... 105 5e-21
AM711867_1436(AM711867|pid:none) Clavibacter michiganensis subsp... 104 8e-21
AP006618_4762(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 104 8e-21
AP008226_1463(AP008226|pid:none) Thermus thermophilus HB8 genomi... 102 1e-20
CP000510_982(CP000510|pid:none) Psychromonas ingrahamii 37, comp... 103 1e-20
CP000680_1485(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 103 1e-20
CP001601_283(CP001601|pid:none) Corynebacterium aurimucosum ATCC... 103 1e-20
CP000058_1370(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 103 2e-20
CP000249_2944(CP000249|pid:none) Frankia sp. CcI3, complete geno... 103 2e-20
AP008226_1430(AP008226|pid:none) Thermus thermophilus HB8 genomi... 102 2e-20
AE017221_1059(AE017221|pid:none) Thermus thermophilus HB27, comp... 102 2e-20
CP000473_979(CP000473|pid:none) Solibacter usitatus Ellin6076, c... 102 2e-20
CP000820_3424(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 102 3e-20
CP001389_595(CP001389|pid:none) Rhizobium sp. NGR234, complete g... 102 4e-20
CP001364_1148(CP001364|pid:none) Chloroflexus sp. Y-400-fl, comp... 101 5e-20
CP000909_1046(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 101 5e-20
CT573213_4814(CT573213|pid:none) Frankia alni str. ACN14A chromo... 101 7e-20
CP001601_282(CP001601|pid:none) Corynebacterium aurimucosum ATCC... 100 9e-20
AM849034_1047(AM849034|pid:none) Clavibacter michiganensis subsp... 100 9e-20
CP000463_471(CP000463|pid:none) Rhodopseudomonas palustris BisA5... 100 1e-19
CP000542_2700(CP000542|pid:none) Verminephrobacter eiseniae EF01... 100 1e-19
AP008955_1667(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 100 2e-19
CP000926_4031(CP000926|pid:none) Pseudomonas putida GB-1, comple... 100 2e-19
CP000712_1322(CP000712|pid:none) Pseudomonas putida F1, complete... 99 3e-19
CP000826_2751(CP000826|pid:none) Serratia proteamaculans 568, co... 99 3e-19
CP000301_241(CP000301|pid:none) Rhodopseudomonas palustris BisB1... 99 3e-19
AP009152_352(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, c... 99 3e-19
CP001019_1103(CP001019|pid:none) Coxiella burnetii CbuG_Q212, co... 99 3e-19
AM911678_2(AM911678|pid:none) Pseudomonas putida acs1 gene for a... 99 3e-19
CP001600_1541(CP001600|pid:none) Edwardsiella ictaluri 93-146, c... 99 3e-19
EF219373_1(EF219373|pid:none) Marinobacter hydrocarbonoclasticus... 99 4e-19
AP006840_798(AP006840|pid:none) Symbiobacterium thermophilum IAM... 99 4e-19
CP000514_1569(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 99 4e-19
CP000557_2575(CP000557|pid:none) Geobacillus thermodenitrificans... 99 4e-19
AM420293_3773(AM420293|pid:none) Saccharopolyspora erythraea NRR... 99 4e-19
CP000804_1737(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 99 4e-19
CP000555_2224(CP000555|pid:none) Methylibium petroleiphilum PM1,... 99 4e-19
CR628336_1514(CR628336|pid:none) Legionella pneumophila str. Par... 98 6e-19
AE017354_1528(AE017354|pid:none) Legionella pneumophila subsp. p... 98 6e-19
AE016825_93(AE016825|pid:none) Chromobacterium violaceum ATCC 12... 98 6e-19
AB471785_2(AB471785|pid:none) Rhodococcus sp. HI-31 DNA, cyclohe... 97 1e-18
CP000949_3820(CP000949|pid:none) Pseudomonas putida W619, comple... 97 1e-18
CP000930_75(CP000930|pid:none) Heliobacterium modesticaldum Ice1... 97 1e-18
BA000004_2006(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 97 2e-18
T16318(T16318)hypothetical protein F41C3.3 - Caenorhabditis eleg... 97 2e-18
AE017221_1093(AE017221|pid:none) Thermus thermophilus HB27, comp... 95 2e-18
CP000804_866(CP000804|pid:none) Roseiflexus castenholzii DSM 139... 96 2e-18
CP000509_2569(CP000509|pid:none) Nocardioides sp. JS614, complet... 96 2e-18
CP000141_824(CP000141|pid:none) Carboxydothermus hydrogenoforman... 96 3e-18
CP000926_4030(CP000926|pid:none) Pseudomonas putida GB-1, comple... 96 3e-18
AM942759_1149(AM942759|pid:none) Proteus mirabilis strain HI4320... 96 3e-18
CP001321_203(CP001321|pid:none) Haemophilus parasuis SH0165, com... 96 3e-18
AP009387_775(AP009387|pid:none) Burkholderia multivorans ATCC 17... 96 4e-18
CP001392_3239(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 96 4e-18
CP000686_221(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 96 4e-18
CP001322_1575(CP001322|pid:none) Desulfatibacillum alkenivorans ... 96 4e-18
CP000513_950(CP000513|pid:none) Dichelobacter nodosus VCS1703A, ... 96 4e-18
BX248355_5(BX248355|pid:none) Corynebacterium diphtheriae gravis... 96 4e-18
BA000004_1131(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 96 4e-18
AM911678_1(AM911678|pid:none) Pseudomonas putida acs1 gene for a... 96 4e-18
CP000937_1241(CP000937|pid:none) Francisella philomiragia subsp.... 96 4e-18
CP000613_3462(CP000613|pid:none) Rhodospirillum centenum SW, com... 95 5e-18
CP000616_178(CP000616|pid:none) Burkholderia vietnamiensis G4 ch... 95 5e-18
BA000040_1319(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 95 5e-18
AP008957_5683(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 95 5e-18
CP000512_4493(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 94 5e-18
AP003256_24(AP003256|pid:none) Oryza sativa Japonica Group genom... 95 6e-18
AP008957_5494(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 95 6e-18
CP000083_3239(CP000083|pid:none) Colwellia psychrerythraea 34H, ... 95 6e-18
CP000454_3557(CP000454|pid:none) Arthrobacter sp. FB24, complete... 95 6e-18
AP008230_3791(AP008230|pid:none) Desulfitobacterium hafniense Y5... 95 6e-18
AF150669_1(AF150669|pid:none) Pseudomonas putida long-chain-fatt... 95 6e-18
CP001087_989(CP001087|pid:none) Desulfobacterium autotrophicum H... 94 8e-18
CP000960_738(CP000960|pid:none) Burkholderia cenocepacia MC0-3 c... 94 8e-18
CP000155_4661(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 94 8e-18
CP000494_903(CP000494|pid:none) Bradyrhizobium sp. BTAi1, comple... 94 8e-18
CP000712_1323(CP000712|pid:none) Pseudomonas putida F1, complete... 94 8e-18
CP001103_3399(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 94 8e-18
AF411962_2(AF411962|pid:none) Xanthomonas oryzae pv. oryzae RpfA... 92 9e-18
CP000967_1728(CP000967|pid:none) Xanthomonas oryzae pv. oryzae P... 92 9e-18
AP008229_2722(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 92 9e-18
AE013598_2812(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 92 9e-18
CP001298_3787(CP001298|pid:none) Methylobacterium chloromethanic... 94 1e-17
BA000043_2690(BA000043|pid:none) Geobacillus kaustophilus HTA426... 94 1e-17
AJ576102_39(AJ576102|pid:none) Bacillus amyloliquefaciens partia... 94 1e-17
CP000750_3477(CP000750|pid:none) Kineococcus radiotolerans SRS30... 94 1e-17
CP000271_2283(CP000271|pid:none) Burkholderia xenovorans LB400 c... 94 1e-17
CP000686_2033(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 94 1e-17
AM238664_1111(AM238664|pid:none) Streptomyces ambofaciens ATCC 2... 94 1e-17
CP000563_1833(CP000563|pid:none) Shewanella baltica OS155, compl... 94 1e-17
CP000076_4531(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 94 1e-17
AE009952_2200(AE009952|pid:none) Yersinia pestis KIM, complete g... 94 1e-17
CP000323_193(CP000323|pid:none) Psychrobacter cryohalolentis K5,... 94 1e-17
CP000697_2426(CP000697|pid:none) Acidiphilium cryptum JF-5, comp... 94 1e-17
AP009389_1376(AP009389|pid:none) Pelotomaculum thermopropionicum... 94 1e-17
CP000378_1546(CP000378|pid:none) Burkholderia cenocepacia AU 105... 94 1e-17
CP000305_1548(CP000305|pid:none) Yersinia pestis Nepal516, compl... 94 1e-17
CU234118_6217(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 94 1e-17
AL939126_191(AL939126|pid:none) Streptomyces coelicolor A3(2) co... 94 1e-17
AE008922_1828(AE008922|pid:none) Xanthomonas campestris pv. camp... 91 2e-17
CP001052_1629(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 93 2e-17
CP001053_385(CP001053|pid:none) Burkholderia phytofirmans PsJN c... 93 2e-17
CP000557_570(CP000557|pid:none) Geobacillus thermodenitrificans ... 93 2e-17
CP000789_1295(CP000789|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 93 2e-17
CP000908_3602(CP000908|pid:none) Methylobacterium extorquens PA1... 93 2e-17
EF089399_60(EF089399|pid:none) Uncultured marine bacterium EB0_3... 93 2e-17
CR931997_2042(CR931997|pid:none) Corynebacterium jeikeium K411 c... 93 2e-17
AE014299_2524(AE014299|pid:none) Shewanella oneidensis MR-1, com... 93 2e-17
CP000884_945(CP000884|pid:none) Delftia acidovorans SPH-1, compl... 92 3e-17
CP000544_2178(CP000544|pid:none) Halorhodospira halophila SL1, c... 92 3e-17
CP000961_2913(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 92 3e-17
CP000388_2782(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 92 3e-17
BX950851_2351(BX950851|pid:none) Erwinia carotovora subsp. atros... 92 3e-17
AM233362_586(AM233362|pid:none) Francisella tularensis subsp. ho... 92 4e-17
AJ749949_1528(AJ749949|pid:none) Francisella tularensis subsp. t... 92 4e-17
CP001087_4708(CP001087|pid:none) Desulfobacterium autotrophicum ... 92 4e-17
CP000439_1393(CP000439|pid:none) Francisella tularensis subsp. n... 92 4e-17
CP000092_163(CP000092|pid:none) Ralstonia eutropha JMP134 megapl... 92 4e-17
AP011115_5882(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 92 4e-17
CP000608_319(CP000608|pid:none) Francisella tularensis subsp. tu... 92 4e-17
AP009152_1549(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 92 4e-17
CP000699_308(CP000699|pid:none) Sphingomonas wittichii RW1, comp... 92 4e-17
CP000738_110(CP000738|pid:none) Sinorhizobium medicae WSM419, co... 92 5e-17
CP000384_3640(CP000384|pid:none) Mycobacterium sp. MCS, complete... 92 5e-17
CP001389_117(CP001389|pid:none) Rhizobium sp. NGR234, complete g... 92 5e-17
CP001252_2378(CP001252|pid:none) Shewanella baltica OS223, compl... 92 5e-17
CP001010_816(CP001010|pid:none) Polynucleobacter necessarius sub... 92 5e-17
CP000753_1861(CP000753|pid:none) Shewanella baltica OS185, compl... 92 5e-17
AP008955_2581(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 92 5e-17
AE017221_342(AE017221|pid:none) Thermus thermophilus HB27, compl... 92 5e-17
(Q8ZES9) RecName: Full=Long-chain-fatty-acid--CoA ligase; ... 92 5e-17
CP000440_447(CP000440|pid:none) Burkholderia ambifaria AMMD chro... 91 7e-17
CP000614_1480(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 91 7e-17
CP000612_2914(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 91 7e-17
AB076368_4(AB076368|pid:none) Comamonas testosteroni tesH, tesI,... 91 7e-17
BA000043_1475(BA000043|pid:none) Geobacillus kaustophilus HTA426... 91 7e-17
CP000304_2899(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 91 7e-17
BA000031_870(BA000031|pid:none) Vibrio parahaemolyticus RIMD 221... 91 7e-17
CP001111_1830(CP001111|pid:none) Stenotrophomonas maltophilia R5... 90 7e-17
CP000469_2370(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 91 9e-17
(Q0P4F7) RecName: Full=Acyl-CoA synthetase family member 2, mito... 91 9e-17
CP000384_741(CP000384|pid:none) Mycobacterium sp. MCS, complete ... 91 9e-17
CP000283_1321(CP000283|pid:none) Rhodopseudomonas palustris BisB... 91 9e-17
DQ988993_1(DQ988993|pid:none) Streptomyces ghanaensis moe gene c... 91 9e-17
CP000444_2236(CP000444|pid:none) Shewanella sp. MR-7, complete g... 91 9e-17
CP001087_4709(CP001087|pid:none) Desulfobacterium autotrophicum ... 91 9e-17
AE004091_3299(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 91 9e-17
CP000638_519(CP000638|pid:none) Agrobacterium vitis S4 plasmid p... 91 9e-17
AM181176_4720(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 91 9e-17
CP000438_1699(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA... 91 9e-17
BA000045_435(BA000045|pid:none) Gloeobacter violaceus PCC 7421 D... 91 1e-16
BA000004_3103(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 91 1e-16
AE017333_1065(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 91 1e-16
CP001283_2950(CP001283|pid:none) Bacillus cereus AH820, complete... 91 1e-16
CP001063_1776(CP001063|pid:none) Shigella boydii CDC 3083-94, co... 91 1e-16
CP000817_3886(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 91 1e-16
CP000555_353(CP000555|pid:none) Methylibium petroleiphilum PM1, ... 91 1e-16
AM286415_2252(AM286415|pid:none) Yersinia enterocolitica subsp. ... 91 1e-16
CP000302_1612(CP000302|pid:none) Shewanella denitrificans OS217,... 91 1e-16
CR380957_291(CR380957|pid:none) Candida glabrata strain CBS138 c... 91 1e-16
AE008691_1822(AE008691|pid:none) Thermoanaerobacter tengcongensi... 90 2e-16
CP000266_1328(CP000266|pid:none) Shigella flexneri 5 str. 8401, ... 90 2e-16
CP000661_2811(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 90 2e-16
CP000478_107(CP000478|pid:none) Syntrophobacter fumaroxidans MPO... 90 2e-16
AE000782_2340(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304... 90 2e-16
AM747720_1535(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 90 2e-16
CP000267_534(CP000267|pid:none) Rhodoferax ferrireducens T118, c... 90 2e-16
CP000958_515(CP000958|pid:none) Burkholderia cenocepacia MC0-3 c... 90 2e-16
AE005674_1423(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 90 2e-16
CP000247_1731(CP000247|pid:none) Escherichia coli 536, complete ... 90 2e-16
(P69451) RecName: Full=Long-chain-fatty-acid--CoA ligase; ... 90 2e-16
DQ077554_12(DQ077554|pid:none) Uncultured bacterium MedeBAC49C08... 90 2e-16
CP000057_443(CP000057|pid:none) Haemophilus influenzae 86-028NP,... 90 2e-16
CP000036_1177(CP000036|pid:none) Shigella boydii Sb227, complete... 90 2e-16
(P46450) RecName: Full=Long-chain-fatty-acid--CoA ligase; ... 90 2e-16
AM260479_2675(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 90 2e-16
CP000614_2615(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 90 2e-16
AM942444_212(AM942444|pid:none) Corynebacterium urealyticum DSM ... 90 2e-16
CP001322_2022(CP001322|pid:none) Desulfatibacillum alkenivorans ... 90 2e-16
CP001102_745(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 90 2e-16
BX842646_252(BX842646|pid:none) Bdellovibrio bacteriovorus compl... 90 2e-16
BA000030_378(BA000030|pid:none) Streptomyces avermitilis MA-4680... 90 2e-16
CU928158_1212(CU928158|pid:none) Escherichia fergusonii ATCC 354... 90 2e-16
CP000804_1728(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 90 2e-16
BX571965_1899(BX571965|pid:none) Burkholderia pseudomallei strai... 90 2e-16
AM743169_2115(AM743169|pid:none) Stenotrophomonas maltophilia K2... 88 2e-16
CP000503_2235(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 89 3e-16
AP011115_3125(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 89 3e-16
BA000004_3104(BA000004|pid:none) Bacillus halodurans C-125 DNA, ... 89 3e-16
CP000378_63(CP000378|pid:none) Burkholderia cenocepacia AU 1054 ... 89 3e-16
CP000440_1411(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 89 3e-16
CP000378_1045(CP000378|pid:none) Burkholderia cenocepacia AU 105... 89 3e-16
CP000386_1717(CP000386|pid:none) Rubrobacter xylanophilus DSM 99... 89 3e-16
AP006627_586(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, co... 89 3e-16
CP000660_436(CP000660|pid:none) Pyrobaculum arsenaticum DSM 1351... 89 3e-16
AP009179_875(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic D... 89 3e-16
AE016827_1358(AE016827|pid:none) Mannheimia succiniciproducens M... 89 3e-16
AP009493_4269(AP009493|pid:none) Streptomyces griseus subsp. gri... 89 3e-16
CP001615_2455(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 89 3e-16
AP009385_2468(AP009385|pid:none) Burkholderia multivorans ATCC 1... 89 3e-16
CP000507_1927(CP000507|pid:none) Shewanella amazonensis SB2B, co... 89 3e-16
CP001196_3329(CP001196|pid:none) Oligotropha carboxidovorans OM5... 89 3e-16
CP000854_4621(CP000854|pid:none) Mycobacterium marinum M, comple... 89 3e-16
CP000961_3951(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 89 3e-16
CP000507_2887(CP000507|pid:none) Shewanella amazonensis SB2B, co... 89 3e-16
CP000090_863(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 89 3e-16
AJ408880_1(AJ408880|pid:none) Sinorhizobium meliloti fadD gene f... 89 3e-16
CP000542_2503(CP000542|pid:none) Verminephrobacter eiseniae EF01... 89 3e-16
CP000961_2386(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 89 3e-16
CP000144_543(CP000144|pid:none) Rhodobacter sphaeroides 2.4.1 ch... 89 3e-16
CP000282_1882(CP000282|pid:none) Saccharophagus degradans 2-40, ... 89 3e-16
BA000040_2237(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 89 3e-16
EU899775_1(EU899775|pid:none) Escherichia coli strain 493/89 lon... 89 3e-16
CP000687_401(CP000687|pid:none) Actinobacillus pleuropneumoniae ... 89 3e-16
CP000924_570(CP000924|pid:none) Thermoanaerobacter pseudethanoli... 89 3e-16
CP000569_393(CP000569|pid:none) Actinobacillus pleuropneumoniae ... 89 3e-16
CP000686_973(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 89 3e-16
AE000516_3287(AE000516|pid:none) Mycobacterium tuberculosis CDC1... 89 3e-16
CP000151_451(CP000151|pid:none) Burkholderia sp. 383 chromosome ... 89 3e-16
(Q17QJ1) RecName: Full=Acyl-CoA synthetase family member 2, mito... 89 3e-16
(Q8XDR6) RecName: Full=Long-chain-fatty-acid--CoA ligase; ... 89 3e-16
CP000386_348(CP000386|pid:none) Rubrobacter xylanophilus DSM 994... 89 3e-16
CR954247_488(CR954247|pid:none) Pseudoalteromonas haloplanktis s... 89 5e-16
CP001151_598(CP001151|pid:none) Rhodobacter sphaeroides KD131 ch... 89 5e-16
CP000708_279(CP000708|pid:none) Brucella ovis ATCC 25840 chromos... 89 5e-16
AP009385_1493(AP009385|pid:none) Burkholderia multivorans ATCC 1... 89 5e-16
BA000043_1030(BA000043|pid:none) Geobacillus kaustophilus HTA426... 89 5e-16
CP000887_269(CP000887|pid:none) Brucella abortus S19 chromosome ... 89 5e-16
AE014291_280(AE014291|pid:none) Brucella suis 1330 chromosome I,... 89 5e-16
AP009385_382(AP009385|pid:none) Burkholderia multivorans ATCC 17... 89 5e-16
AP009493_1333(AP009493|pid:none) Streptomyces griseus subsp. gri... 89 5e-16
(P38137) RecName: Full=Peroxisomal-coenzyme A synthetase; ... 89 5e-16
CP000458_2554(CP000458|pid:none) Burkholderia cenocepacia HI2424... 89 5e-16
CP000713_2173(CP000713|pid:none) Psychrobacter sp. PRwf-1, compl... 89 5e-16
CP000378_1934(CP000378|pid:none) Burkholderia cenocepacia AU 105... 89 5e-16
CP001488_290(CP001488|pid:none) Brucella melitensis ATCC 23457 c... 89 5e-16
AM747720_2767(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 88 6e-16
CP000578_548(CP000578|pid:none) Rhodobacter sphaeroides ATCC 170... 88 6e-16
CP000086_1094(CP000086|pid:none) Burkholderia thailandensis E264... 88 6e-16
CP000728_3269(CP000728|pid:none) Clostridium botulinum F str. La... 88 6e-16
AP011115_1213(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 88 6e-16
AL939129_256(AL939129|pid:none) Streptomyces coelicolor A3(2) co... 88 6e-16
CP000939_3290(CP000939|pid:none) Clostridium botulinum B1 str. O... 88 6e-16
CP000151_1486(CP000151|pid:none) Burkholderia sp. 383 chromosome... 88 6e-16
CP000821_1665(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 88 6e-16
CP001280_3341(CP001280|pid:none) Methylocella silvestris BL2, co... 88 6e-16
DQ324263_1(DQ324263|pid:none) Moraxella osloensis acyl-CoA synth... 88 8e-16
CP000474_2913(CP000474|pid:none) Arthrobacter aurescens TC1, com... 88 8e-16
CP000884_1262(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 88 8e-16
CP000353_1121(CP000353|pid:none) Ralstonia metallidurans CH34 me... 88 8e-16
CP000447_1720(CP000447|pid:none) Shewanella frigidimarina NCIMB ... 88 8e-16
CP000323_1187(CP000323|pid:none) Psychrobacter cryohalolentis K5... 88 8e-16
AP009044_475(AP009044|pid:none) Corynebacterium glutamicum R DNA... 88 8e-16
AX066447_1(AX066447|pid:none) Sequence 29 from Patent WO0100805.... 88 8e-16
DQ098103_1(DQ098103|pid:none) Rhodococcus aetherivorans strain I... 88 8e-16
CP000454_3044(CP000454|pid:none) Arthrobacter sp. FB24, complete... 88 8e-16
AX954601_1(AX954601|pid:none) Sequence 67 from Patent WO03093453... 88 8e-16
AY825941_2(AY825941|pid:none) Streptomyces triostinicus triostin... 88 8e-16
CP000578_182(CP000578|pid:none) Rhodobacter sphaeroides ATCC 170... 88 8e-16
BA000012_5442(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 87 1e-15
CP000863_215(CP000863|pid:none) Acinetobacter baumannii ACICU, c... 87 1e-15
AM849034_2320(AM849034|pid:none) Clavibacter michiganensis subsp... 87 1e-15
CP000254_2370(CP000254|pid:none) Methanospirillum hungatei JF-1,... 87 1e-15
CP000270_3645(CP000270|pid:none) Burkholderia xenovorans LB400 c... 87 1e-15
AE017340_1815(AE017340|pid:none) Idiomarina loihiensis L2TR, com... 87 1e-15
EF011627_2(EF011627|pid:none) Stenotrophomonas maltophilia aconi... 86 1e-15
AC152421_25(AC152421|pid:none) Medicago truncatula clone mth2-7h... 87 1e-15
CP000096_2014(CP000096|pid:none) Pelodictyon luteolum DSM 273, c... 87 1e-15
CP001087_1354(CP001087|pid:none) Desulfobacterium autotrophicum ... 87 1e-15
CP000854_1926(CP000854|pid:none) Mycobacterium marinum M, comple... 87 1e-15
AM942444_1891(AM942444|pid:none) Corynebacterium urealyticum DSM... 87 1e-15
AP009240_1825(AP009240|pid:none) Escherichia coli SE11 DNA, comp... 87 1e-15
AP008957_373(AP008957|pid:none) Rhodococcus erythropolis PR4 DNA... 87 1e-15
AB211309_1(AB211309|pid:none) Streptomyces lasaliensis gene clus... 87 1e-15
CP000141_1569(CP000141|pid:none) Carboxydothermus hydrogenoforma... 87 1e-15
AE017220_1811(AE017220|pid:none) Salmonella enterica subsp. ente... 87 1e-15
CP000088_1991(CP000088|pid:none) Thermobifida fusca YX, complete... 87 1e-15
CP000113_212(CP000113|pid:none) Myxococcus xanthus DK 1622, comp... 87 1e-15
CP001154_1919(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 87 1e-15
BA000028_1176(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 87 2e-15
AE006470_46(AE006470|pid:none) Chlorobium tepidum TLS, complete ... 87 2e-15
BX640451_126(BX640451|pid:none) Bordetella bronchiseptica strain... 87 2e-15
AE016958_2874(AE016958|pid:none) Mycobacterium avium subsp. para... 87 2e-15
CP000444_3117(CP000444|pid:none) Shewanella sp. MR-7, complete g... 87 2e-15
CP000271_1107(CP000271|pid:none) Burkholderia xenovorans LB400 c... 87 2e-15
CP000446_881(CP000446|pid:none) Shewanella sp. MR-4, complete ge... 87 2e-15
CP000088_2151(CP000088|pid:none) Thermobifida fusca YX, complete... 87 2e-15
CP001252_3275(CP001252|pid:none) Shewanella baltica OS223, compl... 87 2e-15
CP000804_680(CP000804|pid:none) Roseiflexus castenholzii DSM 139... 87 2e-15
AM420293_6757(AM420293|pid:none) Saccharopolyspora erythraea NRR... 87 2e-15
CP000362_510(CP000362|pid:none) Roseobacter denitrificans OCh 11... 87 2e-15
CP001151_1097(CP001151|pid:none) Rhodobacter sphaeroides KD131 c... 87 2e-15
AP007157_804(AP007157|pid:none) Aspergillus oryzae RIB40 genomic... 87 2e-15
CP000085_1789(CP000085|pid:none) Burkholderia thailandensis E264... 86 2e-15
(P63521) RecName: Full=Long-chain-fatty-acid--CoA ligase; ... 86 2e-15
CP000891_1052(CP000891|pid:none) Shewanella baltica OS195, compl... 86 2e-15
CP001022_2132(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 86 2e-15
CP000301_4021(CP000301|pid:none) Rhodopseudomonas palustris BisB... 86 2e-15
AM408590_2529(AM408590|pid:none) Mycobacterium bovis BCG Pasteur... 86 2e-15
CP000511_957(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1,... 86 2e-15
A70551(A70551) probable acid-CoA ligase (EC 6.2.1.-) fadD35 - My... 86 2e-15
CP001050_299(CP001050|pid:none) Neisseria gonorrhoeae NCCP11945,... 86 2e-15
CP000774_558(CP000774|pid:none) Parvibaculum lavamentivorans DS-... 86 2e-15
CP000857_1854(CP000857|pid:none) Salmonella enterica subsp. ente... 86 2e-15
CP000753_1004(CP000753|pid:none) Shewanella baltica OS185, compl... 86 2e-15
CP001138_1227(CP001138|pid:none) Salmonella enterica subsp. ente... 86 2e-15
CP000633_410(CP000633|pid:none) Agrobacterium vitis S4 chromosom... 86 2e-15
CP000656_5239(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 86 2e-15
AP011115_2974(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 86 2e-15
CP000026_987(CP000026|pid:none) Salmonella enterica subsp. enter... 86 2e-15
CP000821_2259(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 86 3e-15
CP000141_426(CP000141|pid:none) Carboxydothermus hydrogenoforman... 86 3e-15
BX640412_274(BX640412|pid:none) Bordetella pertussis strain Toha... 86 3e-15
CP000150_274(CP000150|pid:none) Burkholderia sp. 383 chromosome ... 86 3e-15
CP000572_3515(CP000572|pid:none) Burkholderia pseudomallei 1106a... 86 3e-15
CP000270_3921(CP000270|pid:none) Burkholderia xenovorans LB400 c... 86 3e-15
CP000927_1127(CP000927|pid:none) Caulobacter sp. K31, complete g... 86 3e-15
CP000250_1342(CP000250|pid:none) Rhodopseudomonas palustris HaA2... 86 3e-15
AE000666_653(AE000666|pid:none) Methanothermobacter thermautotro... 86 3e-15
AE017333_1020(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 86 3e-15
CP000667_2373(CP000667|pid:none) Salinispora tropica CNB-440, co... 86 3e-15
AE014299_3562(AE014299|pid:none) Shewanella oneidensis MR-1, com... 86 3e-15
CP000713_2172(CP000713|pid:none) Psychrobacter sp. PRwf-1, compl... 86 3e-15
CP001503_2775(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 86 3e-15
CP000271_485(CP000271|pid:none) Burkholderia xenovorans LB400 ch... 86 3e-15
CP000267_2239(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 86 3e-15
CU234118_2174(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 86 3e-15
AM933173_1266(AM933173|pid:none) Salmonella enterica subsp. ente... 86 3e-15
AP008957_5916(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 86 4e-15
CP000143_135(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 ch... 86 4e-15
AE017282_1481(AE017282|pid:none) Methylococcus capsulatus str. B... 86 4e-15
CP000449_1646(CP000449|pid:none) Maricaulis maris MCS10, complet... 86 4e-15
CP001175_876(CP001175|pid:none) Listeria monocytogenes HCC23, co... 86 4e-15
BX640434_186(BX640434|pid:none) Bordetella parapertussis strain ... 86 4e-15
CP001099_1968(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,... 86 4e-15
CP000961_3992(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 86 4e-15
CP000830_1210(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 86 4e-15
CP001393_738(CP001393|pid:none) Anaerocellum thermophilum DSM 67... 86 4e-15
CP000817_257(CP000817|pid:none) Lysinibacillus sphaericus C3-41,... 85 5e-15
CP000512_4277(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 85 5e-15
CP000813_953(CP000813|pid:none) Bacillus pumilus SAFR-032, compl... 85 5e-15
CP000964_1925(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 85 5e-15
CT573213_3430(CT573213|pid:none) Frankia alni str. ACN14A chromo... 85 5e-15
CP000605_1011(CP000605|pid:none) Bifidobacterium longum DJO10A, ... 85 5e-15
AM942759_2633(AM942759|pid:none) Proteus mirabilis strain HI4320... 85 5e-15
AF290948_2(AF290948|pid:none) Pseudomonas putida FadD2 (fadD2) a... 85 5e-15
CP000142_1345(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 85 5e-15
CP000479_928(CP000479|pid:none) Mycobacterium avium 104, complet... 85 5e-15
CP000115_2669(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 85 5e-15
CP000746_1094(CP000746|pid:none) Actinobacillus succinogenes 130... 85 5e-15
AF354454_1(AF354454|pid:none) Capsicum annuum putative acyl-CoA ... 85 5e-15
CP000568_231(CP000568|pid:none) Clostridium thermocellum ATCC 27... 85 5e-15
CT573213_180(CT573213|pid:none) Frankia alni str. ACN14A chromos... 85 5e-15
CP000561_825(CP000561|pid:none) Pyrobaculum calidifontis JCM 115... 83 6e-15
CU928145_1830(CU928145|pid:none) Escherichia coli 55989 chromoso... 85 7e-15
AL009126_1059(AL009126|pid:none) Bacillus subtilis subsp. subtil... 85 7e-15
CP001338_984(CP001338|pid:none) Candidatus Methanosphaerula palu... 85 7e-15
(O07610) RecName: Full=Long-chain-fatty-acid--CoA ligase; ... 85 7e-15
CU928160_1713(CU928160|pid:none) Escherichia coli IAI1 chromosom... 85 7e-15
AE005674_1529(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 85 7e-15
AM270070_4(AM270070|pid:none) Aspergillus niger contig An04c0090... 85 7e-15
AE005174_2454(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 85 7e-15
CP000821_3686(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 85 7e-15
CP000141_1679(CP000141|pid:none) Carboxydothermus hydrogenoforma... 85 7e-15
CP000946_1888(CP000946|pid:none) Escherichia coli ATCC 8739, com... 85 7e-15
CP001390_3515(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 85 7e-15
CP000247_1631(CP000247|pid:none) Escherichia coli 536, complete ... 84 9e-15
CU651637_1626(CU651637|pid:none) Escherichia coli LF82 chromosom... 84 9e-15
CP000557_2728(CP000557|pid:none) Geobacillus thermodenitrificans... 84 9e-15
FJ418564_36(FJ418564|pid:none) Rhodococcus sp. T104 transposase,... 84 9e-15
CP000850_1215(CP000850|pid:none) Salinispora arenicola CNS-205, ... 84 9e-15
CP000542_351(CP000542|pid:none) Verminephrobacter eiseniae EF01-... 84 9e-15
CP000112_557(CP000112|pid:none) Desulfovibrio desulfuricans G20,... 84 9e-15
CP001063_1640(CP001063|pid:none) Shigella boydii CDC 3083-94, co... 84 9e-15
AE014075_2035(AE014075|pid:none) Escherichia coli CFT073, comple... 84 9e-15
FM180568_1786(FM180568|pid:none) Escherichia coli 0127:H6 E2348/... 84 9e-15
CP000769_1237(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 84 9e-15
BX248355_6(BX248355|pid:none) Corynebacterium diphtheriae gravis... 84 1e-14
CP000859_337(CP000859|pid:none) Desulfococcus oleovorans Hxd3, c... 84 1e-14
CP000559_25(CP000559|pid:none) Methanocorpusculum labreanum Z, c... 84 1e-14
CP001052_3419(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 84 1e-14
AE017333_2040(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 84 1e-14
CP000141_577(CP000141|pid:none) Carboxydothermus hydrogenoforman... 84 1e-14
CP001230_1887(CP001230|pid:none) Persephonella marina EX-H1, com... 84 1e-14
CP000141_1683(CP000141|pid:none) Carboxydothermus hydrogenoforma... 84 1e-14
(Q65FT5) RecName: Full=2-succinylbenzoate--CoA ligase; ... 84 1e-14
(A8ALR6) RecName: Full=Probable crotonobetaine/carnitine-CoA lig... 84 1e-14
CP000699_3279(CP000699|pid:none) Sphingomonas wittichii RW1, com... 84 1e-14
CP001103_1131(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 84 1e-14
CP000780_1735(CP000780|pid:none) Candidatus Methanoregula boonei... 84 1e-14
CP000875_2395(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 84 1e-14
AM167904_976(AM167904|pid:none) Bordetella avium 197N complete g... 84 1e-14
AM260479_3210(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 84 1e-14
CP000758_2673(CP000758|pid:none) Ochrobactrum anthropi ATCC 4918... 84 1e-14
CP001276_828(CP001276|pid:none) Thermomicrobium roseum DSM 5159 ... 84 1e-14
AH1283(AH1283) O-succinylbenzoic acid-CoA ligase homolog menE [i... 84 1e-14
CP000474_923(CP000474|pid:none) Arthrobacter aurescens TC1, comp... 84 1e-14
(P58730) RecName: Full=2-succinylbenzoate--CoA ligase; ... 84 1e-14
AM114193_378(AM114193|pid:none) Uncultured methanogenic archaeon... 84 1e-14
CP001322_689(CP001322|pid:none) Desulfatibacillum alkenivorans A... 84 1e-14
CP000884_5956(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 84 1e-14
CP000092_271(CP000092|pid:none) Ralstonia eutropha JMP134 megapl... 84 1e-14
AK300145_1(AK300145|pid:none) Homo sapiens cDNA FLJ50666 complet... 84 1e-14
AP008230_4298(AP008230|pid:none) Desulfitobacterium hafniense Y5... 84 1e-14
AM260479_834(AM260479|pid:none) Ralstonia eutropha H16 chromosom... 84 1e-14
CT573213_3282(CT573213|pid:none) Frankia alni str. ACN14A chromo... 84 1e-14
(Q96CM8) RecName: Full=Acyl-CoA synthetase family member 2, mito... 83 2e-14
CP001338_253(CP001338|pid:none) Candidatus Methanosphaerula palu... 83 2e-14
CP000949_1811(CP000949|pid:none) Pseudomonas putida W619, comple... 83 2e-14
CR543861_217(CR543861|pid:none) Acinetobacter sp. ADP1 complete ... 83 2e-14
AE000782_1016(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304... 83 2e-14
BC014123_1(BC014123|pid:none) Homo sapiens acyl-CoA synthetase f... 83 2e-14
CP000820_4226(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 83 2e-14
AK295258_1(AK295258|pid:none) Homo sapiens cDNA FLJ54351 complet... 83 2e-14
CU928163_1959(CU928163|pid:none) Escherichia coli UMN026 chromos... 83 2e-14
CP000943_162(CP000943|pid:none) Methylobacterium sp. 4-46, compl... 83 2e-14
AF184956_8(AF184956|pid:none) Bacillus subtilis mycosubtilin ope... 83 2e-14
AP006627_342(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, co... 83 2e-14

>AM270172_9(AM270172|pid:none) Aspergillus niger contig An08c0170,
complete genome.
Length = 548

Score = 167 bits (422), Expect(2) = 7e-40
Identities = 91/200 (45%), Positives = 132/200 (66%)
Frame = +2

Query: 647 LERYGMTEIGMALSNPLKVNERIGGTVGFPLPGVQIKIQPELXXXXXXXXXXXXXXXXXX 826
LER+GMTEIGMA+S L+ +RI G+VG+PLPGVQ+++ +
Sbjct: 338 LERFGMTEIGMAISCGLETEKRIDGSVGWPLPGVQVRLTDK----------ESGKVIDAV 387

Query: 827 KEVGELLVKGPQVFKEYFEKRKATEEAFTDDGWFKTGDIVEKDLSTGRLKILGRSSVDII 1006
E G + +KG VF EY+ K +AT++ FT+DGWFKTGD+ +D + G I GR+SVD+I
Sbjct: 388 DEDGMIEIKGDNVFMEYWRKPEATKKEFTEDGWFKTGDVARRD-AQGAYFIQGRASVDLI 446

Query: 1007 KRGGFKISALEIEREILDMDPNIQECAVLGLPNDEYGQDIAAIIVYKKSKKQPMSFEEFK 1186
K GG+KISALE+ER++L +D IQE AV+GL ++E+GQ +AA +V ++S +P+ +
Sbjct: 447 KSGGYKISALEVERKMLGLDA-IQEVAVVGLADEEWGQRVAA-VVKQRSGTEPLELASLR 504

Query: 1187 TNCKQRLAHYKVPNKLLILE 1246
KQ +A YKVP L ++E
Sbjct: 505 AQLKQEMAPYKVPTVLKLVE 524

Score = 21.9 bits (45), Expect(2) = 7e-40
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1

Query: 1252 IPKNAMSKVNKK 1287
I +NAM KVNKK
Sbjct: 526 IERNAMGKVNKK 537

Score = 89.0 bits (219), Expect(2) = 4e-19
Identities = 61/186 (32%), Positives = 90/186 (48%), Gaps = 13/186 (6%)
Frame = +1

Query: 70 PSLKLFNRALKFKDRT--SIINYPNNNTQRYTYNDLLNESQSIANILN-----FKKKDLE 228
PSL LF +A F T + Q +TY LL ++ ++ ++ + +LE
Sbjct: 25 PSLPLFVQANAFAQNTPDKVAVVDATKGQEFTYGQLLADAAALKKVILEELGLTEVGNLE 84

Query: 229 QQRVAYFFGQNFDYVRSQWGIWAAGGTAVPLALSHPIHELQYTIENSKSSMILTNSENYS 408
++R+A+ +DYV +QW +WAAGG VPL +HP+ EL YTI +S S+IL +
Sbjct: 85 ERRIAFLTPNGYDYVVTQWAVWAAGGVTVPLCTTHPVKELLYTIGDSDPSLILLHPTFAD 144

Query: 409 KMKEIGTNLNIPVIEIP------KVGEYTIPKSQWSSMEDYKQYSIDSNRNALIIYTSGI 570
+ ++ PV P T+P S DY+ AL+IYTSG
Sbjct: 145 FETPLKESITKPVPFKPLTPHQQTTTAITLPTISPISFLDYR---------ALMIYTSGT 195

Query: 571 TSKPKG 588
TS PKG
Sbjct: 196 TSNPKG 201

Score = 30.4 bits (67), Expect(2) = 4e-19
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +2

Query: 578 NQKGVVTTHANIEAQIQTLVXXXLERYGMTEIGMALSNPLKVNERIGGTVGFPLPGVQIK 757
N KG VTTH NI Q Q L+ +Y T+ + + V+ I G L GV ++
Sbjct: 198 NPKGCVTTHKNITFQAQCLIEAW--KYSPTDRLIHVLPLHHVHGIINGLAASLLSGVTVE 255

Query: 758 IQPE 769
+ P+
Sbjct: 256 MHPK 259

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,756,750,159
Number of extensions: 32815793
Number of successful extensions: 108278
Number of sequences better than 10.0: 5088
Number of HSP's gapped: 102616
Number of HSP's successfully gapped: 6839
Length of query: 435
Length of database: 1,040,966,779
Length adjustment: 131
Effective length of query: 304
Effective length of database: 621,205,444
Effective search space: 188846454976
Effective search space used: 188846454976
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.80 gvh: 0.31 alm: 0.49 top: 0.53 tms: 0.00 mit: 0.19 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: nuclear
32.0 %: cytoplasmic
20.0 %: cytoskeletal
4.0 %: mitochondrial

>> prediction for Contig-U08861-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0