Contig-U08849-1
Contig ID Contig-U08849-1
Contig update 2002. 9.13
Contig sequence
>Contig-U08849-1 (Contig-U08849-1Q) /CSM_Contig/Contig-U08849-1Q.Seq.d
TTAAAACAATGGGTGCAAGAGTTCTATCATTGGATGGTGGAGGAGTTAGA
GGTATATTACATTGCAATGTTTTACAAGAAATACAAAAGCAACTATATGG
TATTCATATTTCAAAATTGTTTGATTTAATTGTTGGTACATCTGCAGGTG
GATTAGTTGCTTTACAACTTGCATCAACTGAGAAAACACTACCAGAATTA
GCTATATCATTTGACATTTTGGCAAAAAAAGGTTATGAAAGACCTACATT
GGGTATTATTACCCATATATTTGGAAAACCCAAATATAAAAGAAAAAAAC
TAAAAGAATGTTATAAAACCATTTTAAATGACAAATTTTTATCAATTTCA
TTTCCAAAAATAAGGGCNTGCAGTTGTAACTGTAACACAAGAGTCTGGTG
ATTTTGATGAGTGTATATTTTCAAATTATCAAAAAAAACATACCCATCAA
AATGTTCAAAACAAACACATTTTATATCTGGTTCAAAAGTAACTGACGCA
GCTGAAGCCACATCAGCTGCACCTAAATATTTCAGAACATTTGAATATAA
TAGTCGTCAATTTCTTGAT----------ATNTTATGNACTANGGNTGCA
AAAAATAATATTAAAAATGATACTTCNATTTCAGGNAATCCNTTTTCNAT
AAATAATGGNANANAGAATTCNTTCATAACTACNAAAAATTNAAAATTCA
NACNATTAATCNAATCCNTTGGCNATTTACCNTTTATAAATTTTATTTNA
ATTAATTGCCNATAACCTTTTNAAATTATAAAAAAAAATATTTTAATATA
TTATTAAAAAAAAAAAACTATAATTTCTATATATCTTAATTAAAATTTAC
AATAAAAAAAACAAATAAAATAAAAAAAT

Gap gap included
Contig length 869
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 809624
End point 808752
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 2
Link to clone list U08849
List of clone(s)

est1=AFK850F,1,570
est2=AFK850Z,571,871
Translated Amino Acid sequence
ktmgarvlsldgggvrgilhcnvlqeiqkqlygihisklfdlivgtsagglvalqlaste
ktlpelaisfdilakkgyerptlgiithifgkpkykrkklkecyktilndkflsisfpki
racscncntrvw*f**VYIFKLSKKTYPSKCSKQTHFISGSKVTDAAEATSAAPKYFRTF
EYNSRQFLD---

---XLXTXXAKNNIKNDTSISGNPFSINNGXXNSFITTKNXKFXXLIXSXGXLPFINFIX
INCX*pfxiikkniliyy*kkktiisiyln*nlq*kkqik*kn


Translated Amino Acid sequence (All Frames)
Frame A:
lkqwvqefyhwmveelevyyiamfykkyksnymvfifqncli*llvhlqvd*llynlhql
rkhyqn*lyhltfwqkkvmkdlhwvllpiylenpnikekn*knvikpf*mtnfyqfhfqk
*gxavvtvtqesgdfdecifsnyqkkhthqnvqnkhilylvqk*ltqlkphqlhlniseh
lniivvnfl---

---XLXTXXAKNNIKNDTSISGNPFSINNGXXNSFITTKNXKFXXLIXSXGXLPFINFIX
INCX*pfxiikkniliyy*kkktiisiyln*nlq*kkqik*kn

Frame B:
*nngckssiigwwrs*ryitlqcftrntkatiwysyfkiv*fncwyicrwiscfttcin*
enttrisyii*hfgkkrl*ktyigyyypyiwktqi*kkktkrml*nhfk*qifinfiskn
kgxql*l*hkslvilmsvyfqiikknipikmfktntfyiwfksn*rs*shisct*ifqni
*i**ssis*---

---xyxlxxqkiilkmilxfqxixfx*imxxrixs*lxkixnsxx*snplaiyxl*ilfx
liaxnlxkl*kkif*yiikkkkl*flyilikiynkknk*nkk

Frame C:
ktmgarvlsldgggvrgilhcnvlqeiqkqlygihisklfdlivgtsagglvalqlaste
ktlpelaisfdilakkgyerptlgiithifgkpkykrkklkecyktilndkflsisfpki
racscncntrvw*f**VYIFKLSKKTYPSKCSKQTHFISGSKVTDAAEATSAAPKYFRTF
EYNSRQFLD---

---xmxxgckk*y*k*yfxfrxsxfxk*wxxefxhnyxkxkixtinxixwxftxykfyxn
*lpitfxnykkkyfnillkkknynfyis*lkftikktnkikk

own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U08849-1 (Contig-U08849-1Q)
/CSM_Contig/Contig-U08849-1Q.Seq.d
(879 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U08849-1 (Contig-U08849-1Q) /CSM_Contig/Conti... 724 0.0
Contig-U04554-1 (Contig-U04554-1Q) /CSM_Contig/Conti... 38 0.016
Contig-U12694-1 (Contig-U12694-1Q) /CSM_Contig/Conti... 36 0.062
Contig-U12182-1 (Contig-U12182-1Q) /CSM_Contig/Conti... 36 0.062
Contig-U09426-1 (Contig-U09426-1Q) /CSM_Contig/Conti... 36 0.062
Contig-U09344-1 (Contig-U09344-1Q) /CSM_Contig/Conti... 36 0.062
Contig-U08887-1 (Contig-U08887-1Q) /CSM_Contig/Conti... 36 0.062
Contig-U03236-1 (Contig-U03236-1Q) /CSM_Contig/Conti... 36 0.062
Contig-U01323-1 (Contig-U01323-1Q) /CSM_Contig/Conti... 36 0.062
Contig-U12657-1 (Contig-U12657-1Q) /CSM_Contig/Conti... 30 3.8

>Contig-U08849-1 (Contig-U08849-1Q) /CSM_Contig/Contig-U08849-1Q.Seq.d
Length = 879

Score = 724 bits (365), Expect = 0.0
Identities = 525/554 (94%)
Strand = Plus / Plus


Query: 300 ctaaaagaatgttataaaaccattttaaatgacaaatttttatcaatttcatttccaaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ctaaaagaatgttataaaaccattttaaatgacaaatttttatcaatttcatttccaaaa 359


Query: 360 ataagggcntgcagttgtaactgtaacacaagagtctggtgattttgatgagtgtatatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ataagggcntgcagttgtaactgtaacacaagagtctggtgattttgatgagtgtatatt 419


Query: 420 ttcaaattatcnnnnnnnncatacccatcaaaatgttcaaaacaaacacattttatatct 479
||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttcaaattatcaaaaaaaacatacccatcaaaatgttcaaaacaaacacattttatatct 479


Query: 480 ggttcaaaagtaactgacgcagctgaagccacatcagctgcacctaaatatttcagaaca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ggttcaaaagtaactgacgcagctgaagccacatcagctgcacctaaatatttcagaaca 539


Query: 540 tttgaatataatagtcgtcaatttcttgatnnnnnnnnnnatnttatgnactanggntgc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tttgaatataatagtcgtcaatttcttgatnnnnnnnnnnatnttatgnactanggntgc 599


Query: 600 aaaaaataatattaaaaatgatacttcnatttcaggnaatccnttttcnataaataatgg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aaaaaataatattaaaaatgatacttcnatttcaggnaatccnttttcnataaataatgg 659


Query: 660 nananagaattcnttcataactacnaaaaattnaaaattcanacnattaatcnaatccnt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 nananagaattcnttcataactacnaaaaattnaaaattcanacnattaatcnaatccnt 719


Query: 720 tggcnatttaccntttataaattttatttnaattaattgccnataaccttttnaaattat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 tggcnatttaccntttataaattttatttnaattaattgccnataaccttttnaaattat 779


Query: 780 nnnnnnnnntattttaatatattattnnnnnnnnnnnnctataatttctatatatcttaa 839
||||||||||||||||| ||||||||||||||||||||||
Sbjct: 780 aaaaaaaaatattttaatatattattaaaaaaaaaaaactataatttctatatatcttaa 839


Query: 840 ttaaaatttacaat 853
||||||||||||||
Sbjct: 840 ttaaaatttacaat 853


Score = 500 bits (252), Expect = e-141
Identities = 266/273 (97%)
Strand = Plus / Plus


Query: 1 ttaaaacaatgggtgcaagagttctatcattggatggtggaggagttagaggtatattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaaaacaatgggtgcaagagttctatcattggatggtggaggagttagaggtatattac 60


Query: 61 attgcaatgttttacaagaaatacaaaagcaactatatggtattcatatttcaaaattgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgcaatgttttacaagaaatacaaaagcaactatatggtattcatatttcaaaattgt 120


Query: 121 ttgatttaattgttggtacatctgcaggtggattagttgctttacaacttgcatcaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgatttaattgttggtacatctgcaggtggattagttgctttacaacttgcatcaactg 180


Query: 181 agaaaacactaccagaattagctatatcatttgacattttggcnnnnnnnggttatgaaa 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 181 agaaaacactaccagaattagctatatcatttgacattttggcaaaaaaaggttatgaaa 240


Query: 241 gacctacattgggtattattacccatatatttg 273
|||||||||||||||||||||||||||||||||
Sbjct: 241 gacctacattgggtattattacccatatatttg 273


>Contig-U04554-1 (Contig-U04554-1Q) /CSM_Contig/Contig-U04554-1Q.Seq.d
Length = 896

Score = 38.2 bits (19), Expect = 0.016
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 601 aaaaataatattaaaaatg 619
|||||||||||||||||||
Sbjct: 284 aaaaataatattaaaaatg 302


>Contig-U12694-1 (Contig-U12694-1Q) /CSM_Contig/Contig-U12694-1Q.Seq.d
Length = 843

Score = 36.2 bits (18), Expect = 0.062
Identities = 18/18 (100%)
Strand = Plus / Minus


Query: 600 aaaaaataatattaaaaa 617
||||||||||||||||||
Sbjct: 126 aaaaaataatattaaaaa 109


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,962
Number of Sequences: 6905
Number of extensions: 10962
Number of successful extensions: 1326
Number of sequences better than 10.0: 175
length of query: 879
length of database: 5,674,871
effective HSP length: 16
effective length of query: 863
effective length of database: 5,564,391
effective search space: 4802069433
effective search space used: 4802069433
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.13
Homology vs DNA
Query= Contig-U08849-1 (Contig-U08849-1Q) /CSM_Contig/Contig-U08849-1Q.Seq.d
(879 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ327993) Dictyostelium discoideum cDNA clone:dda22d14, 5' ... 442 0.0 4
(BJ343262) Dictyostelium discoideum cDNA clone:dda22d14, 3' ... 250 8e-62 1
(DT571549) EST1082189 GH_TMO Gossypium hirsutum cDNA, mRNA s... 42 0.034 2
(DT558030) EST1068670 GH_TMO Gossypium hirsutum cDNA, mRNA s... 42 0.035 2
(CU861468) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.56 1
(CU856437) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.56 1
(CU606938) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.56 1
(EK032893) 1092956090019 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.56 1
(CT385721) Sus scrofa genomic clone CH242-444E20, genomic su... 48 0.56 1
(CT239159) Sus scrofa genomic clone CH242-143N6, genomic sur... 48 0.56 1
(CL643571) CH213-51F02.T7 CH213 Gasterosteus aculeatus genom... 48 0.56 1
(DB613182) Halocynthia roretzi cDNA clone:mae32n10, 5' end. 48 0.56 1
(DB608759) Halocynthia roretzi cDNA clone:mae15j23, 5' end. 48 0.56 1
(EU880585) Ehrlichia canis strain Bangkok patatin gene, comp... 48 0.56 1
(CP000939) Clostridium botulinum B1 str. Okra, complete genome. 48 0.56 1
(CP000107) Ehrlichia canis str. Jake, complete genome. 48 0.56 1
(BZ696021) SP__Ba0072H20.f SP__Ba Sorghum propinquum genomic... 38 0.63 2
(AC192265) Pan troglodytes chromosome X clone CH251-476F8, W... 38 1.4 5
(EK059406) 1092960062743 Global-Ocean-Sampling_GS-31-01-01-1... 38 1.5 2
(AM462251) Vitis vinifera contig VV78X147749.46, whole genom... 40 1.6 3
(EJ408521) 1093012115474 Global-Ocean-Sampling_GS-28-01-01-1... 40 1.7 2
(EJ262443) 1095349049880 Global-Ocean-Sampling_GS-27-01-01-1... 40 1.8 2
(EK294774) 1095462343456 Global-Ocean-Sampling_GS-31-01-01-1... 46 2.2 1
(EK229549) 1095460173352 Global-Ocean-Sampling_GS-31-01-01-1... 46 2.2 1
(EJ716129) 1092959419520 Global-Ocean-Sampling_GS-30-02-01-1... 46 2.2 1
(EJ706266) 1092956054494 Global-Ocean-Sampling_GS-30-02-01-1... 46 2.2 1
(CZ508173) GMW2-65D9a.b1 GMW2 Glycine max genomic, genomic s... 46 2.2 1
(DB744442) Apis mellifera head cDNA, RIKEN full-length enric... 46 2.2 1
(AP009604) Solanum lycopersicum DNA, chromosome 8, clone: C0... 38 2.5 6
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 36 2.6 7
(EK027330) 1092955380490 Global-Ocean-Sampling_GS-31-01-01-1... 38 2.7 3
(EK056136) 1092960024733 Global-Ocean-Sampling_GS-31-01-01-1... 38 2.8 3
(AC151438) Carollia perspicillata clone 438K12, WORKING DRAF... 38 2.9 2
(AL356122) Human DNA sequence from clone RP11-61P22 on chrom... 42 3.4 3
(AM441390) Vitis vinifera contig VV78X168574.16, whole genom... 34 4.4 4
(AC096647) Homo sapiens BAC clone RP11-2G16 from 2, complete... 38 4.5 4
(AC181953) Strongylocentrotus purpuratus clone R3-1005C19, W... 36 5.6 3
(BU390809) 603805715F1 CSEQCHN57 Gallus gallus cDNA clone Ch... 42 5.6 2
(AC151628) Carollia perspicillata clone 544P19, WORKING DRAF... 38 6.8 3
(AX339140) Sequence 7 from Patent WO0176451. 38 6.9 3
(EJ249251) 1095344017926 Global-Ocean-Sampling_GS-27-01-01-1... 36 6.9 2
(EJ757092) 1092963091426 Global-Ocean-Sampling_GS-30-02-01-1... 38 7.1 2
(CR752641) Zebrafish DNA sequence from clone DKEY-1P18 in li... 34 8.5 7
(BV227184) S233P6192FA9.T0 LabradorRetriever Canis familiari... 44 8.8 1
(AC163676) Mus musculus BAC clone RP24-81A22 from chromosome... 44 8.8 1
(AC138548) Mus musculus chromosome 3, clone RP24-210N9, comp... 44 8.8 1
(AC131695) Mus musculus BAC clone RP23-396F8 from chromosome... 44 8.8 1
(AC119986) Mus musculus chromosome 14, clone RP24-502B4, com... 44 8.8 1
(AC188686) Pan troglodytes BAC clone CH251-653M2 from chromo... 44 8.8 1
(AC148826) Pan troglodytes BAC clone CH251-484F13 from chrom... 44 8.8 1
(AC148318) Pan troglodytes BAC clone CH251-496K6 from chromo... 44 8.8 1
(AM427150) Vitis vinifera contig VV78X115655.5, whole genome... 44 8.8 1
(CQ691630) Sequence 36556 from Patent WO02070737. 44 8.8 1
(AL356277) Human DNA sequence from clone RP11-554D15 on chro... 44 8.8 1
(AC067817) Homo sapiens chromosome 8, clone RP11-723D22, com... 44 8.8 1
(AC004534) Homo sapiens PAC clone RP4-545C24 from 7q21-q22, ... 44 8.8 1
(AC148811) Canis familiaris clone RP81-314M16, WORKING DRAFT... 44 8.8 1
(AC134602) Mus musculus chromosome UNK clone RP23-245N18, WO... 44 8.8 1
(AC109526) Rattus norvegicus clone CH230-288E17, *** SEQUENC... 44 8.8 1
(CU633947) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.8 1
(CU582879) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.8 1
(CU570668) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.8 1
(AL355311) Human DNA sequence *** SEQUENCING CANCELLED *** f... 44 8.8 1
(AC183034) Bos taurus clone CH240-106P14, WORKING DRAFT SEQU... 44 8.8 1
(AC179828) Strongylocentrotus purpuratus clone R3-1012G5, WO... 44 8.8 1
(AC168398) Strongylocentrotus purpuratus clone R3-4002K7, WO... 44 8.8 1
(AC168395) Strongylocentrotus purpuratus clone R3-4002M13, W... 44 8.8 1
(AC024012) Homo sapiens chromosome 10 clone RP11-170J4 map 1... 44 8.8 1
(AL133564) Homo sapiens mRNA; cDNA DKFZp434J186 (from clone ... 44 8.8 1
(AZ537213) AST-2P02762 Genetrap PC-3 Human Prostatic Carcino... 44 8.8 1
(AQ989508) Rfc00058 Photorhabdus luminescens strain W14 M13 ... 44 8.8 1
(ER463648) 1092963910729 Global-Ocean-Sampling_GS-35-01-01-1... 44 8.8 1
(ER462472) 1092963903049 Global-Ocean-Sampling_GS-35-01-01-1... 44 8.8 1
(EK253087) 1095460289178 Global-Ocean-Sampling_GS-31-01-01-1... 44 8.8 1
(EK014798) 1092955225676 Global-Ocean-Sampling_GS-31-01-01-1... 44 8.8 1
(DU189418) 1098574292299 CHORI-243 Ovis aries genomic clone ... 44 8.8 1
(CW908106) RPCI42_148M15.TJ RPCI-42 Bos taurus genomic clone... 44 8.8 1
(CT316275) Sus scrofa genomic clone CH242-385C11, genomic su... 44 8.8 1
(CC944993) BOIGH81TR BO_1.4_1.6_KB_nuc Brassica oleracea gen... 44 8.8 1
(CT675476) Danio rerio EST, clone ZF_mu_155j11 5'. 44 8.8 1
(BG206264) RST25707 Athersys RAGE Library Homo sapiens cDNA,... 44 8.8 1
(FF723408) XABT39702.rev Gateway compatible cien cDNA librar... 44 8.8 1
(EY182460) CBTI8633.g1_B23.ab1:P Triphysaria pusilla root ti... 44 8.8 1
(CP000891) Shewanella baltica OS195, complete genome. 44 8.8 1
(CP000563) Shewanella baltica OS155, complete genome. 44 8.8 1
(AM454300) Vitis vinifera contig VV78X108646.5, whole genome... 36 9.0 3
(AC214597) Populus trichocarpa clone POP037-E17, complete se... 36 9.0 3

>(BJ327993) Dictyostelium discoideum cDNA clone:dda22d14, 5' end,
single read.
Length = 570

Score = 442 bits (223), Expect(4) = 0.0
Identities = 223/223 (100%)
Strand = Plus / Plus


Query: 1 ttaaaacaatgggtgcaagagttctatcattggatggtggaggagttagaggtatattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttaaaacaatgggtgcaagagttctatcattggatggtggaggagttagaggtatattac 60


Query: 61 attgcaatgttttacaagaaatacaaaagcaactatatggtattcatatttcaaaattgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attgcaatgttttacaagaaatacaaaagcaactatatggtattcatatttcaaaattgt 120


Query: 121 ttgatttaattgttggtacatctgcaggtggattagttgctttacaacttgcatcaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgatttaattgttggtacatctgcaggtggattagttgctttacaacttgcatcaactg 180


Query: 181 agaaaacactaccagaattagctatatcatttgacattttggc 223
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaaaacactaccagaattagctatatcatttgacattttggc 223

Score = 260 bits (131), Expect(4) = 0.0
Identities = 131/131 (100%)
Strand = Plus / Plus


Query: 439 catacccatcaaaatgttcaaaacaaacacattttatatctggttcaaaagtaactgacg 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 catacccatcaaaatgttcaaaacaaacacattttatatctggttcaaaagtaactgacg 498


Query: 499 cagctgaagccacatcagctgcacctaaatatttcagaacatttgaatataatagtcgtc 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cagctgaagccacatcagctgcacctaaatatttcagaacatttgaatataatagtcgtc 558


Query: 559 aatttcttgat 569
|||||||||||
Sbjct: 559 aatttcttgat 569

Score = 216 bits (109), Expect(4) = 0.0
Identities = 112/112 (100%)
Strand = Plus / Plus


Query: 319 ccattttaaatgacaaatttttatcaatttcatttccaaaaataagggcntgcagttgta 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ccattttaaatgacaaatttttatcaatttcatttccaaaaataagggcntgcagttgta 378


Query: 379 actgtaacacaagagtctggtgattttgatgagtgtatattttcaaattatc 430
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 actgtaacacaagagtctggtgattttgatgagtgtatattttcaaattatc 430

Score = 87.7 bits (44), Expect(4) = 0.0
Identities = 44/44 (100%)
Strand = Plus / Plus


Query: 231 ggttatgaaagacctacattgggtattattacccatatatttgg 274
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ggttatgaaagacctacattgggtattattacccatatatttgg 274

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 783,511,874
Number of extensions: 48830286
Number of successful extensions: 3931400
Number of sequences better than 10.0: 88
Length of query: 879
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 855
Effective length of database: 97,308,875,965
Effective search space: 83199088950075
Effective search space used: 83199088950075
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.24
Homology vs Protein
Query= Contig-U08849-1 (Contig-U08849-1Q) /CSM_Contig/Contig-U08849-1Q.Seq.d
(879 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

CU638743_858(CU638743|pid:none) Podospora anserina genomic DNA c... 62 3e-08
AC152499_11(AC152499|pid:none) Medicago truncatula clone mth2-56... 60 1e-07
AM482217_5(AM482217|pid:none) Vitis vinifera contig VV78X182164.... 59 2e-07
CP001102_1305(CP001102|pid:none) Candidatus Amoebophilus asiatic... 58 5e-07
CU633750_297(CU633750|pid:none) Cupriavidus taiwanensis str. LMG... 57 6e-07
CP000092_127(CP000092|pid:none) Ralstonia eutropha JMP134 megapl... 57 6e-07
CP000117_1617(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 57 8e-07
CP001291_4536(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 56 1e-06
CU207211_2078(CU207211|pid:none) Herminiimonas arsenicoxydans ch... 56 1e-06
CP000733_874(CP000733|pid:none) Coxiella burnetii Dugway 5J108-1... 56 2e-06
CP000390_546(CP000390|pid:none) Mesorhizobium sp. BNC1, complete... 55 2e-06
CP001326_256(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 55 2e-06
AP007151_260(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 55 4e-06
CP000644_958(CP000644|pid:none) Aeromonas salmonicida subsp. sal... 55 4e-06
CP001020_677(CP001020|pid:none) Coxiella burnetii CbuK_Q154, com... 55 4e-06
EU959038_1(EU959038|pid:none) Zea mays clone 209512 patatin T5 p... 55 4e-06
CP000384_3160(CP000384|pid:none) Mycobacterium sp. MCS, complete... 53 1e-05
CP000874_1967(CP000874|pid:none) Rhizobium sp. NGR234 plasmid pN... 53 1e-05
CU458896_2069(CU458896|pid:none) Mycobacterium abscessus chromos... 53 1e-05
CP001037_1989(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 53 2e-05
AM910993_130(AM910993|pid:none) Plasmodium knowlesi strain H chr... 53 2e-05
AC084197_19(AC084197|pid:none) Caenorhabditis elegans cosmid Y73... 52 2e-05
CP001079_184(CP001079|pid:none) Anaplasma marginale str. Florida... 52 2e-05
AP006849_37(AP006849|pid:none) Oryza sativa Japonica Group genom... 52 3e-05
AP008215_855(AP008215|pid:none) Oryza sativa (japonica cultivar-... 52 3e-05
EU973191_1(EU973191|pid:none) Zea mays clone 394708 patatin T5 p... 52 3e-05
AM920439_312(AM920439|pid:none) Penicillium chrysogenum Wisconsi... 52 3e-05
AM920436_34(AM920436|pid:none) Penicillium chrysogenum Wisconsin... 52 3e-05
BT060501_1(BT060501|pid:none) Zea mays full-length cDNA clone ZM... 51 4e-05
AF061282_10(AF061282|pid:none) Sorghum bicolor 22 kDa kafirin cl... 51 6e-05
AM999887_271(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 51 6e-05
AP007161_245(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 51 6e-05
CP000393_1525(CP000393|pid:none) Trichodesmium erythraeum IMS101... 51 6e-05
AY233333_28(AY233333|pid:none) Escherichia coli strain ECOR31 hi... 51 6e-05
AB478515_66(AB478515|pid:none) Wolbachia endosymbiont of Cadra c... 50 8e-05
CP000585_207(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 50 8e-05
EF085549_1(EF085549|pid:none) Picea sitchensis clone WS0276_K19 ... 50 8e-05
CP001391_572(CP001391|pid:none) Wolbachia sp. wRi, complete geno... 50 1e-04
AB478516_60(AB478516|pid:none) Wolbachia endosymbiont of Cadra c... 50 1e-04
AL161590_32(AL161590|pid:none) Arabidopsis thaliana DNA chromoso... 50 1e-04
AP007174_307(AP007174|pid:none) Aspergillus oryzae RIB40 genomic... 50 1e-04
CP000781_552(CP000781|pid:none) Xanthobacter autotrophicus Py2, ... 50 1e-04
AJ002596_1(AJ002596|pid:none) Arabidopsis thaliana mRNA for pata... 50 1e-04
AE017196_502(AE017196|pid:none) Wolbachia endosymbiont of Drosop... 50 1e-04
CP000107_182(CP000107|pid:none) Ehrlichia canis str. Jake, compl... 50 1e-04
AP003917_6(AP003917|pid:none) Oryza sativa Japonica Group genomi... 49 2e-04
CP000470_209(CP000470|pid:none) Shewanella sp. ANA-3 plasmid 1, ... 49 2e-04
CP001102_399(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 49 2e-04
AM920428_7(AM920428|pid:none) Penicillium chrysogenum Wisconsin ... 49 2e-04
AY233333_31(AY233333|pid:none) Escherichia coli strain ECOR31 hi... 49 3e-04
AM999887_454(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 49 3e-04
CP000469_1247(CP000469|pid:none) Shewanella sp. ANA-3, complete ... 49 3e-04
CT573075_3(CT573075|pid:none) Zebrafish DNA sequence from clone ... 49 3e-04
CP000542_4567(CP000542|pid:none) Verminephrobacter eiseniae EF01... 49 3e-04
CP000700_31(CP000700|pid:none) Sphingomonas wittichii RW1 plasmi... 49 3e-04
CP001325_513(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 48 4e-04
AC005058_1(AC005058|pid:none) Homo sapiens BAC clone CTB-54D4 fr... 48 4e-04
CP000388_210(CP000388|pid:none) Pseudoalteromonas atlantica T6c,... 48 4e-04
AK168475_1(AK168475|pid:none) Mus musculus 17 days embryo kidney... 48 4e-04
CP001102_1033(CP001102|pid:none) Candidatus Amoebophilus asiatic... 48 4e-04
CU633901_266(CU633901|pid:none) Podospora anserina genomic DNA c... 48 4e-04
AK024335_1(AK024335|pid:none) Homo sapiens cDNA FLJ14273 fis, cl... 48 4e-04
AK291755_1(AK291755|pid:none) Homo sapiens cDNA FLJ77572 complet... 48 4e-04
AK004621_1(AK004621|pid:none) Mus musculus adult male lung cDNA,... 48 4e-04
(Q9NP80) RecName: Full=Calcium-independent phospholipase A2-gamm... 48 4e-04
AK108679_1(AK108679|pid:none) Oryza sativa Japonica Group cDNA c... 48 5e-04
EF066650_25(EF066650|pid:none) Sinorhizobium meliloti strain SM1... 48 5e-04
AP003962_8(AP003962|pid:none) Oryza sativa Japonica Group genomi... 48 5e-04
AE014296_1876(AE014296|pid:none) Drosophila melanogaster chromos... 48 5e-04
BT038613_1(BT038613|pid:none) Zea mays full-length cDNA clone ZM... 47 6e-04
AF158254_1(AF158254|pid:none) Nicotiana tabacum patatin-like pro... 47 6e-04
CP000738_1220(CP000738|pid:none) Sinorhizobium medicae WSM419, c... 47 6e-04
AP007171_777(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 47 6e-04
CP001327_520(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 47 8e-04
CP000847_867(CP000847|pid:none) Rickettsia akari str. Hartford, ... 47 8e-04
EU419878_1(EU419878|pid:none) Gallus gallus PNPLA8 mRNA, complet... 47 8e-04
AM435376_1(AM435376|pid:none) Vitis vinifera contig VV78X013204.... 47 8e-04
BT039730_1(BT039730|pid:none) Zea mays full-length cDNA clone ZM... 47 0.001
T03841(T03841) patatin homolog - common tobacco &U68484_1(U6848... 47 0.001
U68483_1(U68483|pid:none) Nicotiana tabacum patatin homolog gene... 47 0.001
AY809890_1(AY809890|pid:none) Schistosoma japonicum SJCHGC09449 ... 47 0.001
AJ617735_1(AJ617735|pid:none) Hevea brasiliensis partial mRNA fo... 46 0.001
CP001291_2614(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 46 0.001
(Q42502) RecName: Full=Patatin-2-Kuras 3; EC=3.1.1.-; F... 46 0.001
AF113546_1(AF113546|pid:none) Hevea brasiliensis latex protein a... 46 0.001
AJ223038_1(AJ223038|pid:none) Hevea brasiliensis mRNA for latex ... 46 0.001
CP000409_355(CP000409|pid:none) Rickettsia canadensis str. McKie... 46 0.001
AM436318_2(AM436318|pid:none) Vitis vinifera contig VV78X058876.... 46 0.001
BT066538_1(BT066538|pid:none) Zea mays full-length cDNA clone ZM... 46 0.001
(Q3YJT3) RecName: Full=Patatin-2-Kuras 1; EC=3.1.1.-; F... 46 0.001
AL954747_2520(AL954747|pid:none) Nitrosomonas europaea ATCC 1971... 46 0.002
AF158253_1(AF158253|pid:none) Nicotiana tabacum patatin-like pro... 46 0.002
CS163776_1(CS163776|pid:none) Sequence 7 from Patent WO200508309... 46 0.002
CP000053_360(CP000053|pid:none) Rickettsia felis URRWXCal2, comp... 46 0.002
AX146911_1(AX146911|pid:none) Sequence 11 from Patent WO0136468. 46 0.002
BC077558_1(BC077558|pid:none) Xenopus laevis MGC83523 protein, m... 46 0.002
(Q8LPW4) RecName: Full=Patatin-17; EC=3.1.1.-; Flags: P... 45 0.002
(Q3YJT2) RecName: Full=Patatin-2-Kuras 2; EC=3.1.1.-; F... 45 0.002
EU962920_1(EU962920|pid:none) Zea mays clone 246543 patatin clas... 45 0.002
(Q5XTS1) RecName: Full=Calcium-independent phospholipase A2-gamm... 45 0.002
CP000586_131(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 45 0.002
(Q2MY41) RecName: Full=Patatin-10; EC=3.1.1.-; Flags: P... 45 0.003
(Q2MY37) RecName: Full=Patatin-14; EC=3.1.1.-; Flags: P... 45 0.003
B26017(B26017)patatin T58 precursor - potato 45 0.003
S05593(S05593) patatin precursor (clone pPATB1) - potato (fragme... 45 0.003
CS163782_1(CS163782|pid:none) Sequence 13 from Patent WO20050830... 45 0.003
(Q3YJT0) RecName: Full=Patatin-2-Kuras 4; EC=3.1.1.-; F... 45 0.003
(P15477) RecName: Full=Patatin-B2; EC=3.1.1.-; Flags: P... 45 0.003
AM452376_1(AM452376|pid:none) Vitis vinifera contig VV78X078974.... 45 0.003
(Q2MY52) RecName: Full=Patatin group M-2; EC=3.1.1.-; F... 45 0.003
(P15476) RecName: Full=Patatin-B1; EC=3.1.1.-; Flags: P... 45 0.003
T22327(T22327) hypothetical protein F47A4.5 - Caenorhabditis ele... 45 0.003
BC067375_1(BC067375|pid:none) Danio rerio phospholipase A2, grou... 45 0.003
(P11768) RecName: Full=Patatin group M-1; EC=3.1.1.-; A... 45 0.003
(Q2MY45) RecName: Full=Patatin-06; EC=3.1.1.-; Flags: P... 45 0.003
BX571946_1(BX571946|pid:none) Zebrafish DNA sequence from clone ... 45 0.003
AF193067_1(AF193067|pid:none) Vigna unguiculata patatin-like pro... 45 0.004
CP000462_2851(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 45 0.004
EF145888_1(EF145888|pid:none) Populus trichocarpa clone WS0114_A... 44 0.005
CP001295_19(CP001295|pid:none) Cyanothece sp. PCC 7424 plasmid p... 44 0.005
AF498099_1(AF498099|pid:none) Solanum chacoense patatin storage ... 44 0.005
AX876424_1(AX876424|pid:none) Sequence 11329 from Patent EP10746... 44 0.007
AF102988_1(AF102988|pid:none) Homo sapiens Ca2+-independent phos... 44 0.007
AF117692_1(AF117692|pid:none) Homo sapiens calcium-independent p... 44 0.007
AF061282_14(AF061282|pid:none) Sorghum bicolor 22 kDa kafirin cl... 44 0.007
AL022322_4(AL022322|pid:none) Human DNA sequence from clone CTA-... 44 0.007
(O60733) RecName: Full=85 kDa calcium-independent phospholipase ... 44 0.007
T12503(T12503)hypothetical protein DKFZp434A102.1 - human (fragm... 44 0.007
BX294013_9(BX294013|pid:none) Neurospora crassa DNA linkage grou... 44 0.007
CP000884_748(CP000884|pid:none) Delftia acidovorans SPH-1, compl... 44 0.007
AF061282_12(AF061282|pid:none) Sorghum bicolor 22 kDa kafirin cl... 44 0.007
AM920458_1(AM920458|pid:none) Penicillium chrysogenum Wisconsin ... 44 0.007
AM920428_498(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 44 0.007
AF102989_1(AF102989|pid:none) Homo sapiens Ca2+-independent phos... 44 0.007
AM920437_2668(AM920437|pid:none) Penicillium chrysogenum Wiscons... 44 0.007
AK153333_1(AK153333|pid:none) Mus musculus bone marrow macrophag... 44 0.009
(P97819) RecName: Full=85 kDa calcium-independent phospholipase ... 44 0.009
(P97570) RecName: Full=85 kDa calcium-independent phospholipase ... 44 0.009
BC052845_1(BC052845|pid:none) Mus musculus phospholipase A2, gro... 44 0.009
T33857(T33857)hypothetical protein D1037.5 - Caenorhabditis eleg... 44 0.009
EU973572_1(EU973572|pid:none) Zea mays clone 401130 unknown mRNA. 44 0.009
(Q2MY58) RecName: Full=Patatin group A-3; EC=3.1.1.-; F... 43 0.012
CP000685_3223(CP000685|pid:none) Flavobacterium johnsoniae UW101... 43 0.012
AM889285_2893(AM889285|pid:none) Gluconacetobacter diazotrophicu... 43 0.016
(Q2MY54) RecName: Full=Patatin group J-1; EC=3.1.1.-; F... 43 0.016
AM920457_1(AM920457|pid:none) Penicillium chrysogenum Wisconsin ... 43 0.016
(Q2MY60) RecName: Full=Patatin-02; EC=3.1.1.-; AltName:... 43 0.016
(Q41487) RecName: Full=Patatin-16; EC=3.1.1.-; Flags: P... 43 0.016
AL138648_5(AL138648|pid:none) Arabidopsis thaliana DNA chromosom... 42 0.021
(Q2MY56) RecName: Full=Patatin group D-2; EC=3.1.1.-; F... 42 0.021
AC006618_1(AC006618|pid:none) Caenorhabditis elegans cosmid C45B... 42 0.021
CP000615_1039(CP000615|pid:none) Burkholderia vietnamiensis G4 c... 42 0.027
CP000875_2528(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 42 0.027
CP000571_2308(CP000571|pid:none) Burkholderia pseudomallei 668 c... 42 0.027
AC097279_16(AC097279|pid:none) Oryza sativa chromosome 3 BAC OSJ... 42 0.027
CP000085_722(CP000085|pid:none) Burkholderia thailandensis E264 ... 42 0.035
CP000379_965(CP000379|pid:none) Burkholderia cenocepacia AU 1054... 42 0.035
Z68299_8(Z68299|pid:none) Caenorhabditis elegans Cosmid T04B2, c... 42 0.035
T24442(T24442;T26042)hypothetical protein T04B2.5 - Caenorhabdit... 42 0.035
CP000909_3076(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 42 0.035
AJ620477_24(AJ620477|pid:none) Angiococcus disciformis partial O... 41 0.060
AJ620477_25(AJ620477|pid:none) Angiococcus disciformis partial O... 41 0.060
CS131067_1(CS131067|pid:none) Sequence 122 from Patent WO2005066... 40 0.078
CP001337_174(CP001337|pid:none) Chloroflexus aggregans DSM 9485,... 40 0.078
CU633749_1897(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 40 0.078
CS131065_1(CS131065|pid:none) Sequence 120 from Patent WO2005066... 40 0.078
AM260479_2344(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 40 0.10
EF413636_1(EF413636|pid:none) Uncultured organism clone PLP pata... 40 0.10
AP007163_14(AP007163|pid:none) Aspergillus oryzae RIB40 genomic ... 40 0.10
CP000813_1380(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 40 0.10
CP000849_501(CP000849|pid:none) Rickettsia bellii OSU 85-389, co... 40 0.13
AE016825_441(AE016825|pid:none) Chromobacterium violaceum ATCC 1... 39 0.17
(Q2MY40) RecName: Full=Patatin-11; EC=3.1.1.-; Flags: P... 39 0.17
CP000090_2106(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 39 0.23
AM180355_2237(AM180355|pid:none) Clostridium difficile 630 compl... 39 0.23
BX908798_1293(BX908798|pid:none) Parachlamydia-related symbiont ... 39 0.30
CP001227_452(CP001227|pid:none) Rickettsia peacockii str. Rustic... 39 0.30
CP000155_5836(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 38 0.39
CP000683_672(CP000683|pid:none) Rickettsia massiliae MTU5, compl... 38 0.51
CP000943_4350(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 38 0.51
AM181176_4372(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 38 0.51
CP000282_1884(CP000282|pid:none) Saccharophagus degradans 2-40, ... 37 0.66
(Q04958) RecName: Full=Lysophospholipase NTE1; EC=3.1.1... 37 1.1
CP000644_387(CP000644|pid:none) Aeromonas salmonicida subsp. sal... 37 1.1
CR382132_423(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 37 1.1
CP000076_1555(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 37 1.1
CP000094_1470(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 37 1.1
CR378679_24(CR378679|pid:none) Photobacterium profundum SS9 chro... 37 1.1
CP000934_1696(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 36 1.5
CP000790_1675(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 36 1.5
AP009153_3381(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 36 1.5
CP000316_3038(CP000316|pid:none) Polaromonas sp. JS666, complete... 36 1.9
CR555306_2294(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 36 1.9
CP000270_2776(CP000270|pid:none) Burkholderia xenovorans LB400 c... 35 2.5
BT043146_1(BT043146|pid:none) Zea mays full-length cDNA clone ZM... 35 2.5
BT000869_1(BT000869|pid:none) Arabidopsis thaliana clone C103467... 35 2.5
AE016825_4374(AE016825|pid:none) Chromobacterium violaceum ATCC ... 35 2.5
FM209186_1726(FM209186|pid:none) Pseudomonas aeruginosa LESB58 c... 35 2.5
CP000813_1621(CP000813|pid:none) Bacillus pumilus SAFR-032, comp... 35 2.5
CP000141_2035(CP000141|pid:none) Carboxydothermus hydrogenoforma... 35 2.5
AE004091_3339(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 35 2.5
AE017344_410(AE017344|pid:none) Cryptococcus neoformans var. neo... 35 2.5
(Q756Z0) RecName: Full=Lysophospholipase NTE1; EC=3.1.1... 35 3.3
CP000514_496(CP000514|pid:none) Marinobacter aquaeolei VT8, comp... 35 3.3
CT573326_3630(CT573326|pid:none) Pseudomonas entomophila str. L4... 35 3.3
CP000926_3994(CP000926|pid:none) Pseudomonas putida GB-1, comple... 35 3.3
CP000076_4318(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 35 3.3
CP000359_1069(CP000359|pid:none) Deinococcus geothermalis DSM 11... 35 3.3
CP000875_1140(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 35 3.3
CP000868_1212(CP000868|pid:none) Burkholderia multivorans ATCC 1... 35 3.3
AE017194_4865(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 35 4.3
CP000269_2248(CP000269|pid:none) Janthinobacterium sp. Marseille... 35 4.3
FB905949_1(FB905949|pid:none) Sequence 125222 from Patent WO2008... 35 4.3
AP006618_995(AP006618|pid:none) Nocardia farcinica IFM 10152 DNA... 35 4.3
AP003728_4(AP003728|pid:none) Oryza sativa Japonica Group genomi... 35 4.3
FB905947_1(FB905947|pid:none) Sequence 125220 from Patent WO2008... 35 4.3
FP236842_659(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/96... 35 4.3
AM454315_1(AM454315|pid:none) Vitis vinifera contig VV78X020860.... 35 4.3
AE015928_1782(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 34 5.6
CP000901_764(CP000901|pid:none) Yersinia pestis Angola, complete... 34 5.6
AC004697_13(AC004697|pid:none) Arabidopsis thaliana chromosome 2... 34 5.6
AP008209_944(AP008209|pid:none) Oryza sativa (japonica cultivar-... 34 5.6
BX842627_19(BX842627|pid:none) Neurospora crassa DNA linkage gro... 34 5.6
CP000949_3779(CP000949|pid:none) Pseudomonas putida W619, comple... 34 5.6
CU633895_205(CU633895|pid:none) Podospora anserina genomic DNA c... 34 5.6
CP001052_2439(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 34 5.6
CR543861_721(CR543861|pid:none) Acinetobacter sp. ADP1 complete ... 34 5.6
CP000094_1696(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 34 5.6
CP000267_353(CP000267|pid:none) Rhodoferax ferrireducens T118, c... 34 5.6
BX936398_578(BX936398|pid:none) Yersinia pseudotuberculosis IP32... 34 5.6
CP000305_303(CP000305|pid:none) Yersinia pestis Nepal516, comple... 34 5.6
CP000304_4059(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 34 5.6
CP000529_1598(CP000529|pid:none) Polaromonas naphthalenivorans C... 34 5.6
CP000950_3583(CP000950|pid:none) Yersinia pseudotuberculosis YPI... 34 5.6
CP000720_3452(CP000720|pid:none) Yersinia pseudotuberculosis IP ... 34 5.6
CP001359_2134(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 34 7.3
CP001131_2048(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 34 7.3
CP000251_2388(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 34 7.3
CP001359_1545(CP001359|pid:none) Anaeromyxobacter dehalogenans 2... 34 7.3
FB905945_1(FB905945|pid:none) Sequence 125218 from Patent WO2008... 34 7.3
CP001503_1180(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 34 7.3
AK229196_1(AK229196|pid:none) Arabidopsis thaliana mRNA for hypo... 34 7.3
CP000471_2973(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 33 9.6
(Q6BQK9) RecName: Full=Lysophospholipase NTE1; EC=3.1.1... 33 9.6
FN392320_494(FN392320|pid:none) Pichia pastoris GS115 chromosome... 33 9.6
FB905965_1(FB905965|pid:none) Sequence 125238 from Patent WO2008... 33 9.6
CP000655_1225(CP000655|pid:none) Polynucleobacter necessarius su... 33 9.6
AL034559_4(AL034559|pid:none) Plasmodium falciparum MAL3P7, comp... 33 9.6

>CU638743_858(CU638743|pid:none) Podospora anserina genomic DNA
chromosome 3, supercontig 2.
Length = 1349

Score = 62.0 bits (149), Expect = 3e-08
Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
Frame = +3

Query: 12 GARVLSLDGGGVRGILHCNVLQEIQKQ--LYGIHISKLFDLIVGTSAGGLVALQLASTEK 185
G R+L+LDGGGVRGI+ ++Q ++++ L + ++++FDLIVGTS GG+VAL L K
Sbjct: 785 GVRILTLDGGGVRGIVELALVQALEQEIGLTNVRLAEMFDLIVGTSTGGIVALALTFPGK 844

Query: 186 TLPE--LAISFDILAKKG 233
LP A++ LA++G
Sbjct: 845 -LPSDPAAVASSPLARRG 861

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,040,832,055
Number of extensions: 18054865
Number of successful extensions: 44477
Number of sequences better than 10.0: 248
Number of HSP's gapped: 44271
Number of HSP's successfully gapped: 251
Length of query: 293
Length of database: 1,040,966,779
Length adjustment: 127
Effective length of query: 166
Effective length of database: 634,022,584
Effective search space: 105247748944
Effective search space used: 105247748944
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.61 gvh: 0.40 alm: 0.40 top: 0.53 tms: 0.00 mit: 0.35 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: mitochondrial
32.0 %: cytoplasmic
24.0 %: nuclear
4.0 %: cytoskeletal
4.0 %: vesicles of secretory system

>> prediction for Contig-U08849-1 is mit

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0