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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U08806-1
Contig ID Contig-U08806-1
Contig update 2002. 9.13
Contig sequence 
>Contig-U08806-1 (Contig-U08806-1Q) /CSM_Contig/Contig-U08806-1Q.Seq.d
TTCAGAAGCTGGTAGAACCACATTTAGAACCATCATTAAATCATTGGAAA
TTCATCCATTCATTAGTGTACCATTATTGGTTGATTTTATACCAGAGAAA
CATGTTGCTGTCTCTGTTAGACCTTTCTATGCCGATAGAGGTTCATTAAG
AGATTTCATACATAAATCAAAACCAAAAATGCCATACGCTGATAAATATG
ATACTCATCTTCAATTAAATGAAAAAATAGTTTCAAAATTTGGTAGACAA
ATTTTAGAAGCTTTAATATTTTTAAAAAATCATAATTTCCCTTATTTTCA
TTTAAATTCTGCAAATGTTTTAGTTGATGATCAAATTTGTTTAATAAGTG
ATTATGAAAATTCATTTTTAGGATTAGAACCAAGATTTTCAGATTTTATT
AGACAACATAATGAAAAGATTGATCCAGATGTATTATCATTTGGTTTAGT
ATTATTTGAGATGGCATGTGGTTATGAGATGGAGAATCCACATTCAGTTG
ATATCTCTATTCCAGCACATTGCTATCCAGAAGTTAGAAAAGTATTAGGA
AGCAATTTTTAAACCATTCTATGGTACACCAATTACATTGGAAGNAGTTG
AGTAAAANGGATTTCTTTTCATATCATAAATTTAGGAATTTACCACTTCA
CAGATTAACTTATACTTCAAG----------AGGGTGGTTATGCAATTTC
AACTTCTTCTTCATTACCAAGTAATTTCTTGGCAAATGTAAAACCTGCAA
ATTCAACATCATATTCATTACTTTCAAATACTACAACAAATACAACTAAT
ACTTCAACAAGTAGTAGTTTAAATAGTAGTTTCAATAGTAACGTTTCAAC
TTCATATTCAAATGCAACAACCACTACAAATACCACTTCTGCATCAAGTG
TTTCACCACCAATTTCTTCACCACCTCCACCTCCACCTCCACCACCACCA
TCCAAATCTTCAGGACCACCACCTCCACCACCACCACCACCCAAATCTTC
AGGTCCTCCACCTCCAACCACCACCCAAATCCTCCCCACCACCACCAGCT
GATGGCAGTAGAAAAGGTTTACTATCCTCAATTGAATCTTTTTCTTCTTC
AAAATTAAAAAAAACAAAAACTGTTGATAAAAGTGGTCCGTTATTAAAAA
AATCTTAAAACAAAACAAAACAAAACAAAACAAAAAAAAGAAAACAAAAC
AAAAAATAAAAAATTAAATTATTTAAA
Gap gap included
Contig length 1217
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 1873506
End point 1874723
Strand (PLUS/MINUS) PLUS
Number of clones 4
Number of EST 6
Link to clone list U08806
List of clone(s) 

est1=AFJ111F,1,594
est2=VFH761F,280,671
est3=VFH761Z,672,1206
est4=VSB379Z,672,1218
est5=AFJ111Z,798,1202
est6=VSB473Z,883,1218
Translated Amino Acid sequence 
frsw*nhi*nhh*iignssih*ctiig*fytretccclc*tflcr*rfikrfht*iktkn
air**i*ysssik*knsfkiw*tnfrsfnifkks*fplfsfkfckcfs**snlfnk*l*k
fifrirtkifrfy*tt**kd*srciiiwfsii*dgmwl*dgestfs*ylysstllsrs*K
SIRKQFLNHSMVHQLHWKXLSKXDFFSYHKFRNLPLHRLTYTS---

---GGYAISTSSSLPSNFLANVKPANSTSYSLLSNTTTNTTNTSTSSSLNSSFNSNVSTS
YSNATTTTNTTSASSVSPPISSPPPPPPPPPPSKSSGPPPPPPPPPKSSGPPPPTTTQIL
PTTTS*wq*krftiln*iffffkikknknc**kwsvikkilkqnktkqnkkkktkqkikn
*ii*
Translated Amino Acid sequence (All Frames) 
Frame A:
frsw*nhi*nhh*iignssih*ctiig*fytretccclc*tflcr*rfikrfht*iktkn
air**i*ysssik*knsfkiw*tnfrsfnifkks*fplfsfkfckcfs**snlfnk*l*k
fifrirtkifrfy*tt**kd*srciiiwfsii*dgmwl*dgestfs*ylysstllsrs*K
SIRKQFLNHSMVHQLHWKXLSKXDFFSYHKFRNLPLHRLTYTS---

---rvvmqfqlllhyqviswqm*nlqiqhhihyfqilqqiqlilqqvvv*ivvsivtfql
hiqmqqplqipllhqvfhhqflhhlhlhlhhhhpnlqdhhlhhhhhpnlqvlhlqpppks
sppppadgsrkgllssiesfsssklkktktvdksgpllkks*nktkqnktkkrkqnkk*k
iklfk

Frame B:
seagrttfrtiiksleihpfisvpllvdfipekhvavsvrpfyadrgslrdfihkskpkm
pyadkydthlqlnekivskfgrqilealiflknhnfpyfhlnsanvlvddqiclisdyen
sflgleprfsdfirqhnekidpdvlsfglvlfemacgyemenphsvdisipahcypevrk
vlgsnf*tilwytnyigxs*vkxisfhiinlgiyhftd*lilq---

---gwlcnfnfffitk*flgkcktckfniifitfkyynkyn*yfnk**fk**fq**rfnf
ifkcnnhykyhfcikcfttnffttstststttiqifrtttstttttqifrsstsnhhpnp
phhhqlmavekvyypqlnlfllqn*kkqkllikvvry*knlktkqnktkqkkenktknkk
lnyl

Frame C:
qklvephlepslnhwkfihslvyhywlilyqrnmllslldlsmpievh*eisyinqnqkc
htlinmilifn*mkk*fqnlvdkf*kl*yf*kiiislifi*ilqmf*lmikfv**vimki
hf*d*nqdfqilldnimkrliqmyyhlv*yylrwhvvmrwrihiqlislfqhiaiqklek
y*eaifkpfygtpitlexve*xgflfis*i*efttsqinlyfk---

---GGYAISTSSSLPSNFLANVKPANSTSYSLLSNTTTNTTNTSTSSSLNSSFNSNVSTS
YSNATTTTNTTSASSVSPPISSPPPPPPPPPPSKSSGPPPPPPPPPKSSGPPPPTTTQIL
PTTTS*wq*krftiln*iffffkikknknc**kwsvikkilkqnktkqnkkkktkqkikn
*ii*
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U08806-1 (Contig-U08806-1Q)
/CSM_Contig/Contig-U08806-1Q.Seq.d
         (1227 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U08806-1 (Contig-U08806-1Q) /CSM_Contig/Conti...  1719  0.0
Contig-U12214-1 (Contig-U12214-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U12053-1 (Contig-U12053-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U11508-1 (Contig-U11508-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U06472-1 (Contig-U06472-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U04013-1 (Contig-U04013-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U01756-1 (Contig-U01756-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U14477-1 (Contig-U14477-1Q) /CSM_Contig/Conti...    36  0.087
Contig-U12716-1 (Contig-U12716-1Q) /CSM_Contig/Conti...    36  0.087
Contig-U11698-1 (Contig-U11698-1Q) /CSM_Contig/Conti...    36  0.087

>Contig-U08806-1 (Contig-U08806-1Q) /CSM_Contig/Contig-U08806-1Q.Seq.d
          Length = 1227

 Score = 1719 bits (867), Expect = 0.0
 Identities = 903/903 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcagaagctggtagaaccacatttagaaccatcattaaatcattggaaattcatccatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttcagaagctggtagaaccacatttagaaccatcattaaatcattggaaattcatccatt 60

                                                                       
Query: 61  cattagtgtaccattattggttgattttataccagagaaacatgttgctgtctctgttag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cattagtgtaccattattggttgattttataccagagaaacatgttgctgtctctgttag 120

                                                                       
Query: 121 acctttctatgccgatagaggttcattaagagatttcatacataaatcaaaaccaaaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acctttctatgccgatagaggttcattaagagatttcatacataaatcaaaaccaaaaat 180

                                                                       
Query: 181 gccatacgctgataaatatgatactcatcttcaattaaatgaaaaaatagtttcaaaatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gccatacgctgataaatatgatactcatcttcaattaaatgaaaaaatagtttcaaaatt 240

                                                                       
Query: 241 tggtagacaaattttagaagctttaatatttttaaaaaatcataatttcccttattttca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggtagacaaattttagaagctttaatatttttaaaaaatcataatttcccttattttca 300

                                                                       
Query: 301 tttaaattctgcaaatgttttagttgatgatcaaatttgtttaataagtgattatgaaaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttaaattctgcaaatgttttagttgatgatcaaatttgtttaataagtgattatgaaaa 360

                                                                       
Query: 361 ttcatttttaggattagaaccaagattttcagattttattagacaacataatgaaaagat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcatttttaggattagaaccaagattttcagattttattagacaacataatgaaaagat 420

                                                                       
Query: 421 tgatccagatgtattatcatttggtttagtattatttgagatggcatgtggttatgagat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgatccagatgtattatcatttggtttagtattatttgagatggcatgtggttatgagat 480

                                                                       
Query: 481 ggagaatccacattcagttgatatctctattccagcacattgctatccagaagttagaaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggagaatccacattcagttgatatctctattccagcacattgctatccagaagttagaaa 540

                                                                       
Query: 541 agtattaggaagcaatttttaaaccattctatggtacaccaattacattggaagnagttg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agtattaggaagcaatttttaaaccattctatggtacaccaattacattggaagnagttg 600

                                                                       
Query: 601 agtaaaanggatttcttttcatatcataaatttaggaatttaccacttcacagattaact 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agtaaaanggatttcttttcatatcataaatttaggaatttaccacttcacagattaact 660

                                                                       
Query: 661 tatacttcaagnnnnnnnnnnagggtggttatgcaatttcaacttcttcttcattaccaa 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tatacttcaagnnnnnnnnnnagggtggttatgcaatttcaacttcttcttcattaccaa 720

                                                                       
Query: 721 gtaatttcttggcaaatgtaaaacctgcaaattcaacatcatattcattactttcaaata 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtaatttcttggcaaatgtaaaacctgcaaattcaacatcatattcattactttcaaata 780

                                                                       
Query: 781 ctacaacaaatacaactaatacttcaacaagtagtagtttaaatagtagtttcaatagta 840
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctacaacaaatacaactaatacttcaacaagtagtagtttaaatagtagtttcaatagta 840

                                                                       
Query: 841 acgtttcaacttcatattcaaatgcaacaaccactacaaataccacttctgcatcaagtg 900
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 acgtttcaacttcatattcaaatgcaacaaccactacaaataccacttctgcatcaagtg 900

              
Query: 901 ttt 903
           |||
Sbjct: 901 ttt 903


 Score =  105 bits (53), Expect = 1e-22
 Identities = 53/53 (100%)
 Strand = Plus / Plus

                                                                 
Query: 1048 gctgatggcagtagaaaaggtttactatcctcaattgaatctttttcttcttc 1100
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 gctgatggcagtagaaaaggtttactatcctcaattgaatctttttcttcttc 1100


>Contig-U12214-1 (Contig-U12214-1Q) /CSM_Contig/Contig-U12214-1Q.Seq.d
          Length = 2445

 Score = 38.2 bits (19), Expect = 0.022
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 1081 attgaatctttttcttctt 1099
            |||||||||||||||||||
Sbjct: 1571 attgaatctttttcttctt 1553


>Contig-U12053-1 (Contig-U12053-1Q) /CSM_Contig/Contig-U12053-1Q.Seq.d
          Length = 1359

 Score = 38.2 bits (19), Expect = 0.022
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 782  tacaacaaatacaactaatacttcaac 808
            |||||||| |||||| |||||||||||
Sbjct: 1271 tacaacaactacaacaaatacttcaac 1297


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,108
Number of Sequences: 6905
Number of extensions: 18108
Number of successful extensions: 2252
Number of sequences better than 10.0: 293
length of query: 1227
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1211
effective length of database: 5,564,391
effective search space: 6738477501
effective search space used: 6738477501
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.13
Homology vs DNA 
Query= Contig-U08806-1 (Contig-U08806-1Q) /CSM_Contig/Contig-U08806-1Q.Seq.d
         (1227 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ327075) Dictyostelium discoideum cDNA clone:dda19e03, 5' ...   531   0.0    3
(BJ413684) Dictyostelium discoideum cDNA clone:ddv16j15, 5' ...   283   0.0    3
(AU261984) Dictyostelium discoideum vegetative cDNA clone:VS...   440   e-143  3
(BJ434352) Dictyostelium discoideum cDNA clone:ddv16j15, 3' ...   333   e-110  2
(BJ344373) Dictyostelium discoideum cDNA clone:dda19e03, 3' ...   105   3e-36  2
(AU262034) Dictyostelium discoideum vegetative cDNA clone:VS...   105   3e-19  2
(CU695112) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   0.12   2
(AM910995) Plasmodium knowlesi strain H chromosome 13, compl...    50   0.20   1
(AC160285) Bos taurus clone CH240-81M9, WORKING DRAFT SEQUEN...    48   0.79   1
(AC222027) Bos taurus clone CH240-374C20, WORKING DRAFT SEQU...    48   0.79   1
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255...    48   0.79   1
(AL132969) Arabidopsis thaliana DNA chromosome 3, BAC clone ...    34   1.5    5
(DU047217) 152129 Tomato HindIII BAC Library Solanum lycoper...    34   2.1    2
(AC162304) Mus musculus chromosome 7, clone RP23-350J16, com...    46   3.1    1
(AC130672) Mus musculus chromosome 1, clone RP24-95L18, comp...    46   3.1    1
(AC198539) Myotis lucifugus clone CH235-152I8, WORKING DRAFT...    46   3.1    1
(AC189659) Brassica rapa subsp. pekinensis clone KBrS016N10,...    46   3.1    1
(AC189316) Brassica rapa subsp. pekinensis clone KBrB035I03,...    46   3.1    1
(AZ753994) RPCI-24-129E11.TJ RPCI-24 Mus musculus genomic cl...    46   3.1    1
(CU862034) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   6.1    6
(AC138449) Medicago truncatula clone mth2-14o23, complete se...    38   6.6    3
(BJ357363) Dictyostelium discoideum cDNA clone:dda63g07, 3' ...    36   7.7    2
(DU955686) 226991 Tomato MboI BAC Library Solanum lycopersic...    34   7.8    2
(EJ707010) 1092956057046 Global-Ocean-Sampling_GS-30-02-01-1...    34   7.8    2
(DU939198) 371277 Tomato EcoRI BAC Library Solanum lycopersi...    34   7.8    2
(DU939200) 371279 Tomato EcoRI BAC Library Solanum lycopersi...    34   7.8    2
(CK518656) rswea0_000908.y1 swe Bombyx mori cDNA, mRNA seque...    32   8.2    2
(AC187283) Zea mays chromosome 6 clone CH201-321C24; ZMMBBc0...    36   8.4    4
(AM465034) Vitis vinifera contig VV78X248899.5, whole genome...    36   10.0   2

>(BJ327075) Dictyostelium discoideum cDNA clone:dda19e03, 5' end,
           single read.
          Length = 593

 Score =  531 bits (268), Expect(3) = 0.0
 Identities = 268/268 (100%)
 Strand = Plus / Plus


Query: 281 cataatttcccttattttcatttaaattctgcaaatgttttagttgatgatcaaatttgt 340
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 cataatttcccttattttcatttaaattctgcaaatgttttagttgatgatcaaatttgt 340


Query: 341 ttaataagtgattatgaaaattcatttttaggattagaaccaagattttcagattttatt 400
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ttaataagtgattatgaaaattcatttttaggattagaaccaagattttcagattttatt 400


Query: 401 agacaacataatgaaaagattgatccagatgtattatcatttggtttagtattatttgag 460
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 agacaacataatgaaaagattgatccagatgtattatcatttggtttagtattatttgag 460


Query: 461 atggcatgtggttatgagatggagaatccacattcagttgatatctctattccagcacat 520
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 atggcatgtggttatgagatggagaatccacattcagttgatatctctattccagcacat 520


Query: 521 tgctatccagaagttagaaaagtattag 548
           ||||||||||||||||||||||||||||
Sbjct: 521 tgctatccagaagttagaaaagtattag 548

 Score =  428 bits (216), Expect(3) = 0.0
 Identities = 216/216 (100%)
 Strand = Plus / Plus


Query: 1   ttcagaagctggtagaaccacatttagaaccatcattaaatcattggaaattcatccatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttcagaagctggtagaaccacatttagaaccatcattaaatcattggaaattcatccatt 60


Query: 61  cattagtgtaccattattggttgattttataccagagaaacatgttgctgtctctgttag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cattagtgtaccattattggttgattttataccagagaaacatgttgctgtctctgttag 120


Query: 121 acctttctatgccgatagaggttcattaagagatttcatacataaatcaaaaccaaaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acctttctatgccgatagaggttcattaagagatttcatacataaatcaaaaccaaaaat 180


Query: 181 gccatacgctgataaatatgatactcatcttcaatt 216
           ||||||||||||||||||||||||||||||||||||
Sbjct: 181 gccatacgctgataaatatgatactcatcttcaatt 216

 Score = 91.7 bits (46), Expect(3) = 0.0
 Identities = 46/46 (100%)
 Strand = Plus / Plus


Query: 549 gaagcaatttttaaaccattctatggtacaccaattacattggaag 594
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gaagcaatttttaaaccattctatggtacaccaattacattggaag 593

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,115,339,516
Number of extensions: 68171571
Number of successful extensions: 5468552
Number of sequences better than 10.0: 31
Length of query: 1227
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1203
Effective length of database: 97,308,875,965
Effective search space: 117062577785895
Effective search space used: 117062577785895
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 6.24
Homology vs Protein 
Query= Contig-U08806-1 (Contig-U08806-1Q) /CSM_Contig/Contig-U08806-1Q.Seq.d
         (1227 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54WZ5) RecName: Full=Probable inactive serine/threonine-protei...   374   e-111
DQ095196_1(DQ095196|pid:none) Mus musculus modulator of Na,K-ATP...    91   6e-17
AK150337_1(AK150337|pid:none) Mus musculus bone marrow macrophag...    91   6e-17
(Q91WB6) RecName: Full=PX domain-containing protein kinase-like ...    91   6e-17
BX649457_1(BX649457|pid:none) Zebrafish DNA sequence from clone ...    91   8e-17
AK152058_1(AK152058|pid:none) Mus musculus bone marrow macrophag...    91   1e-16
AK157364_1(AK157364|pid:none) Mus musculus activated spleen cDNA...    90   1e-16
AB209688_1(AB209688|pid:none) Homo sapiens mRNA for PX domain-co...    89   3e-16
BC108670_1(BC108670|pid:none) Homo sapiens PX domain containing ...    89   3e-16
AK296034_1(AK296034|pid:none) Homo sapiens cDNA FLJ50091 complet...    89   3e-16
BC014479_1(BC014479|pid:none) Homo sapiens PX domain containing ...    89   3e-16
BC008943_1(BC008943|pid:none) Homo sapiens PX domain containing ...    89   3e-16
CR859845_1(CR859845|pid:none) Pongo abelii mRNA; cDNA DKFZp469B2...    89   3e-16
AK131385_1(AK131385|pid:none) Homo sapiens cDNA FLJ16460 fis, cl...    89   3e-16
(Q6ZN39) RecName: Full=PX domain-containing protein kinase-like ...    89   3e-16
AY437879_1(AY437879|pid:none) Homo sapiens PX ser/thr kinase v2 ...    89   3e-16
AY847221_1(AY847221|pid:none) Homo sapiens PX serine/threonine k...    89   3e-16
AE014134_1362(AE014134|pid:none) Drosophila melanogaster chromos...    87   9e-16
AF051162_1(AF051162|pid:none) Drosophila melanogaster SLOB (Slob...    86   2e-15
AE014134_1361(AE014134|pid:none) Drosophila melanogaster chromos...    86   2e-15
AY060721_1(AY060721|pid:none) Drosophila melanogaster GH16988 fu...    86   3e-15
AY847222_1(AY847222|pid:none) Homo sapiens PX serine/threonine k...    85   6e-15
AE013599_560(AE013599|pid:none) Drosophila melanogaster chromoso...    79   4e-13
AE013599_559(AE013599|pid:none) Drosophila melanogaster chromoso...    79   4e-13
AY128506_1(AY128506|pid:none) Drosophila melanogaster SD08108 fu...    79   4e-13
(Q55F27) RecName: Full=Probable inactive serine/threonine-protei...    45   0.004
FM992689_523(FM992689|pid:none) Candida dubliniensis CD36 chromo...    45   0.007
AB010071_4(AB010071|pid:none) Arabidopsis thaliana genomic DNA, ...    43   0.020
U41994_13(U41994|pid:none) Caenorhabditis elegans cosmid F59A6, ...    42   0.034
T16511(T16511)hypothetical protein F59A6.1 - Caenorhabditis eleg...    42   0.034
AM502243_247(AM502243|pid:none) Leishmania infantum chromosome 25.     41   0.099
AB016885_14(AB016885|pid:none) Arabidopsis thaliana genomic DNA,...    40   0.17
EF014123_1(EF014123|pid:none) Synthetic construct flag-tagged pr...    40   0.17
(Q09147) RecName: Full=Fibroblast growth factor receptor homolog...    40   0.17
AP008217_1094(AP008217|pid:none) Oryza sativa (japonica cultivar...    40   0.22
AC124141_15(AC124141|pid:none) Oryza sativa (japonica cultivar-g...    40   0.22
AF067936_4(AF067936|pid:none) Caenorhabditis elegans cosmid C24G...    39   0.29
(Q54R82) RecName: Full=Mitogen-activated protein kinase kinase k...    39   0.29
AF462860_1(AF462860|pid:none) Arabidopsis thaliana AT5g58950/k19...    39   0.38
AM464618_3(AM464618|pid:none) Vitis vinifera contig VV78X011041....    39   0.38
AJ298992_1(AJ298992|pid:none) Fagus sylvatica partial mRNA for p...    39   0.38
AY064216_1(AY064216|pid:none) Capsicum annuum receptor protein k...    39   0.49
EF014122_1(EF014122|pid:none) Synthetic construct flag-tagged pr...    39   0.49
AL096859_4(AL096859|pid:none) Arabidopsis thaliana DNA chromosom...    39   0.49
AK223626_1(AK223626|pid:none) Homo sapiens mRNA for c-src tyrosi...    38   0.64
(Q0VBZ0) RecName: Full=Tyrosine-protein kinase CSK;          EC=...    38   0.64
(P41720) RecName: Full=Serine/threonine-protein kinase 1;       ...    38   0.64
AJ577132_1(AJ577132|pid:none) Yarrowia lipolytica partial ste11 ...    38   0.84
AK298245_1(AK298245|pid:none) Homo sapiens cDNA FLJ51496 complet...    38   0.84
AB006558_1(AB006558|pid:none) Ephydatia fluviatilis EfPTK11 mRNA...    38   0.84
AK137297_1(AK137297|pid:none) Mus musculus adult male urinary bl...    38   0.84
AY335760_1(AY335760|pid:none) Synthetic construct Homo sapiens c...    38   0.84
AP003106_6(AP003106|pid:none) Oryza sativa Japonica Group genomi...    38   0.84
(P41240) RecName: Full=Tyrosine-protein kinase CSK;          EC=...    38   0.84
AK297694_1(AK297694|pid:none) Homo sapiens cDNA FLJ55227 complet...    38   0.84
EF043691_1(EF043691|pid:none) Synthetic construct clone ATCC 103...    38   0.84
(P32577) RecName: Full=Tyrosine-protein kinase CSK;          EC=...    38   0.84
AM437807_3(AM437807|pid:none) Vitis vinifera contig VV78X040480....    38   0.84
AJ719465_1(AJ719465|pid:none) Gallus gallus mRNA for hypothetica...    38   0.84
AK316723_1(AK316723|pid:none) Arabidopsis thaliana AT5G03730 mRN...    37   1.1
BT069715_1(BT069715|pid:none) Zea mays full-length cDNA clone ZM...    37   1.1
(Q07553) RecName: Full=Guanylate cyclase 32E;          EC=4.6.1....    37   1.1
AM910986_87(AM910986|pid:none) Plasmodium knowlesi strain H chro...    37   1.1
DQ508128_1(DQ508128|pid:none) Synthetic construct flag-tagged pr...    37   1.1
BC097064_1(BC097064|pid:none) Danio rerio mitogen-activated prot...    37   1.4
(Q7RAH3) RecName: Full=Calcium-dependent protein kinase 1;      ...    37   1.9
EF677305_1(EF677305|pid:none) Picea sitchensis clone WS02765_B19...    37   1.9
D84827(D84827)probable protein kinase [imported] - Arabidopsis t...    37   1.9
AC007020_4(AC007020|pid:none) Arabidopsis thaliana chromosome 2 ...    37   1.9
AC007211_17(AC007211|pid:none) Arabidopsis thaliana chromosome 2...    36   2.4
FJ795040_1(FJ795040|pid:none) Glycine max with no lysine kinase ...    36   2.4
A84831(A84831) probable protein kinase [imported] - Arabidopsis ...    36   2.4
AB006698_13(AB006698|pid:none) Arabidopsis thaliana genomic DNA,...    36   2.4
AC137836_10(AC137836|pid:none) Medicago truncatula clone mth2-10...    36   2.4
AP008209_1380(AP008209|pid:none) Oryza sativa (japonica cultivar...    36   2.4
FJ795037_1(FJ795037|pid:none) Glycine max with no lysine kinase ...    36   2.4
AC139290_18(AC139290|pid:none) Medicago truncatula clone mth2-23...    36   2.4
BC169994_1(BC169994|pid:none) Xenopus laevis c-src tyrosine kina...    36   3.2
AM494961_179(AM494961|pid:none) Leishmania braziliensis chromoso...    36   3.2
A38903(A38903;A36474) protein kinase 1 - fission yeast (Schizosa...    36   3.2
CR382139_422(CR382139|pid:none) Debaryomyces hansenii strain CBS...    36   3.2
AY074626_1(AY074626|pid:none) Arabidopsis thaliana At2g41930/T6D...    35   4.1
FM992688_1145(FM992688|pid:none) Candida dubliniensis CD36 chrom...    35   4.1
EF014099_1(EF014099|pid:none) Synthetic construct HA-tagged prot...    35   4.1
(P22987) RecName: Full=Protein kinase kin1;          EC=2.7.11.1...    35   4.1
AP003231_4(AP003231|pid:none) Oryza sativa Japonica Group genomi...    35   4.1
AY168502_1(AY168502|pid:none) Halichoerus grypus oocyte maturati...    35   4.1
AK172347_1(AK172347|pid:none) Mus musculus activated spleen cDNA...    35   4.1
AP008207_3010(AP008207|pid:none) Oryza sativa (japonica cultivar...    35   4.1
AY035053_1(AY035053|pid:none) Arabidopsis thaliana putative rece...    35   4.1
AK111625_1(AK111625|pid:none) Oryza sativa Japonica Group cDNA c...    35   4.1
M69017_1(M69017|pid:none) S.cerevisiae protein kinase 1 gene, co...    35   4.1
EF681137_1(EF681137|pid:none) Arabidopsis thaliana FERONIA recep...    35   4.1
(P13185) RecName: Full=Protein kinase KIN1;          EC=2.7.11.1...    35   4.1
FJ708740_1(FJ708740|pid:none) Arabidopsis thaliana leucine-rich ...    35   5.4
AM502225_75(AM502225|pid:none) Leishmania infantum chromosome 7.       35   5.4
AC144483_2(AC144483|pid:none) Medicago truncatula clone mth2-12f...    35   5.4
FB811741_1(FB811741|pid:none) Sequence 31014 from Patent WO20080...    35   7.1
AE017350_179(AE017350|pid:none) Cryptococcus neoformans var. neo...    35   7.1
AM271000_1(AM271000|pid:none) Datisca glomerata mRNA for putativ...    35   7.1
CR380958_145(CR380958|pid:none) Candida glabrata strain CBS138 c...    35   7.1
CU928169_177(CU928169|pid:none) Kluyveromyces thermotolerans str...    35   7.1
AM483981_1(AM483981|pid:none) Vitis vinifera contig VV78X053593....    35   7.1
AC157488_3(AC157488|pid:none) Medicago truncatula chromosome 2 c...    35   7.1
AY140910_3(AY140910|pid:none) Candidatus Fritschea bemisiae stra...    35   7.1
AC002336_15(AC002336|pid:none) Arabidopsis thaliana chromosome 2...    35   7.1
BC124789_1(BC124789|pid:none) Danio rerio zgc:153997, mRNA (cDNA...    35   7.1
BT061049_1(BT061049|pid:none) Zea mays full-length cDNA clone ZM...    35   7.1
BT088647_1(BT088647|pid:none) Zea mays full-length cDNA clone ZM...    35   7.1
AJ243961_5(AJ243961|pid:none) Oryza sativa chromosome 4 BAC l133...    34   9.2
AJ010093_1(AJ010093|pid:none) Brassica napus mRNA for MAP3K beta...    34   9.2
D50468_1(D50468|pid:none) Arabidopsis thaliana mRNA for mitogen-...    34   9.2
(Q39008) RecName: Full=Mitogen-activated protein kinase kinase k...    34   9.2
AB000796_1(AB000796|pid:none) Arabidopsis thaliana mRNA for NPK1...    34   9.2
AL662970_13(AL662970|pid:none) Oryza sativa genomic DNA, chromos...    34   9.2
BC059394_1(BC059394|pid:none) Homo sapiens v-yes-1 Yamaguchi sar...    34   9.2
U16176_1(U16176|pid:none) Arabidopsis thaliana protein kinase (A...    34   9.2
AY044687_1(AY044687|pid:none) Epomops franqueti oocyte maturatio...    34   9.2
AF034090_1(AF034090|pid:none) Neurospora crassa MAPKK kinase (nr...    34   9.2
AP005312_20(AP005312|pid:none) Oryza sativa Japonica Group genom...    34   9.2
(P51566) RecName: Full=Serine/threonine-protein kinase AFC1;    ...    34   9.2
(Q93804) RecName: Full=Myoblast growth factor receptor egl-15;  ...    34   9.2
EF014096_1(EF014096|pid:none) Synthetic construct HA-tagged prot...    34   9.2
CU928174_328(CU928174|pid:none) Zygosaccharomyces rouxii strain ...    34   9.2
CR855160_1(CR855160|pid:none) Oryza sativa genomic DNA, chromoso...    34   9.2
FJ708761_1(FJ708761|pid:none) Arabidopsis thaliana leucine-rich ...    34   9.2
AC079037_8(AC079037|pid:none) Oryza sativa chromosome 10 clone O...    34   9.2
AC000106_13(AC000106|pid:none) Sequence of BAC F7G19 from Arabid...    34   9.2
AB003358_1(AB003358|pid:none) Xenopus laevis mRNA for Lyn protei...    34   9.2
AP002845_6(AP002845|pid:none) Oryza sativa Japonica Group genomi...    34   9.2
EF014103_1(EF014103|pid:none) Synthetic construct HA-tagged prot...    34   9.2
AY288941_1(AY288941|pid:none) Caenorhabditis elegans EGL-15 mRNA...    34   9.2
BC125943_1(BC125943|pid:none) Danio rerio c-src tyrosine kinase,...    34   9.2

>(Q54WZ5) RecName: Full=Probable inactive serine/threonine-protein
           kinase slob2; AltName: Full=Slowpoke-binding protein 2;
          Length = 574

 Score =  374 bits (961), Expect(2) = e-111
 Identities = 183/186 (98%), Positives = 184/186 (98%)
 Frame = +2

Query: 2   SEAGRTTFRTIIKSLEIHPFISVPLLVDFIPEKHVAVSVRPFYADRGSLRDFIHKSKPKM 181
           SEAGRTTFRTIIKSLEIHPFISVPLLVDFIPEKHVAVSVRPFYADRGSLRDFIHKSKPKM
Sbjct: 124 SEAGRTTFRTIIKSLEIHPFISVPLLVDFIPEKHVAVSVRPFYADRGSLRDFIHKSKPKM 183

Query: 182 PYADKYDTHLQLNEKIVSKFGRQILEALIFLKNHNFPYFHLNSANVLVDDQICLISDYEN 361
           PYADKYDTHLQLNEKIVSKFGRQILEALIFLKNHNFPYFHLNSANVLVDDQICLISDYEN
Sbjct: 184 PYADKYDTHLQLNEKIVSKFGRQILEALIFLKNHNFPYFHLNSANVLVDDQICLISDYEN 243

Query: 362 SFLGLEPRFSDFIRQHNEKIDPDVLSFGLVLFEMACGYEMENPHSVDISIPAHCYPEVRK 541
           SFLGLEPRFSDFIRQHNEKIDPDVLSFGLVLFEMACGYEMENPHSVDISIPAHCYPEVRK
Sbjct: 244 SFLGLEPRFSDFIRQHNEKIDPDVLSFGLVLFEMACGYEMENPHSVDISIPAHCYPEVRK 303

Query: 542 VLGSNF 559
           VL + F
Sbjct: 304 VLEAIF 309

 Score = 51.2 bits (121), Expect(2) = e-111
 Identities = 22/24 (91%), Positives = 23/24 (95%)
 Frame = +1

Query: 598 LSKXDFFSYHKFRNLPLHRLTYTS 669
           LSK DFFSYHKF+NLPLHRLTYTS
Sbjct: 322 LSKMDFFSYHKFKNLPLHRLTYTS 345

 Score = 46.6 bits (109), Expect = 0.002
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +3

Query: 684 GGYAISTSSSLPSNFLANVKPA 749
           GGYAISTSSSLPSNFLANVKPA
Sbjct: 418 GGYAISTSSSLPSNFLANVKPA 439

 Score = 36.2 bits (82), Expect = 2.4
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +3

Query: 531 KLEKY*EAIFKPFYGTPITLE 593
           ++ K  EAIFKPFYGTPITLE
Sbjct: 300 EVRKVLEAIFKPFYGTPITLE 320

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,334,428,107
Number of extensions: 23950689
Number of successful extensions: 63963
Number of sequences better than 10.0: 133
Number of HSP's gapped: 63863
Number of HSP's successfully gapped: 136
Length of query: 409
Length of database: 1,040,966,779
Length adjustment: 131
Effective length of query: 278
Effective length of database: 621,205,444
Effective search space: 172695113432
Effective search space used: 172695113432
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.78  gvh: 0.48  alm: 0.53  top: 0.53  tms: 0.00  mit: 0.43  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 56.0 %: mitochondrial
	 28.0 %: nuclear
	 12.0 %: cytoplasmic
	  4.0 %: peroxisomal

>> prediction for Contig-U08806-1 is mit
VS (DIR, S) 2
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0