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Dicty_cDB
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U08448-1
Contig ID Contig-U08448-1
Contig update 2002. 9.13
Contig sequence 
>Contig-U08448-1 (Contig-U08448-1Q) /CSM_Contig/Contig-U08448-1Q.Seq.d
ATGGTAGTGATTTAGTATTTTTAAATGATTTATTCGAGTATAATACTATA
GAGAATAAATGGACCCAATTAAAGGGTACTGGCGACCACCCACCTCAGAA
ATGCGGTCATAAGCTATTCAATTTCGGTGGTAAATTATTATTATTTGGTG
GTGGATATGGCTCACAATGGGATATTAAATATAATGATGTTCATATCTAT
GACAGATCTTTAAATAGGTGGACAAAAGTTAAAACAAAGGGAGAAATCAA
CGTTTGTACATTTACTGTTAGTTGGAGTGTTGGTCCATTTCTTTTCATCT
ATGGTGGTCAATCTGTTAAAGATGATCTATTAACTAATGATCTCTATATG
TTAGATACTGTAAATATGGAATGGAGTTCTATCAATACAAATTGTACACC
TTTTCCACGTGATATGGGTTCTGGTGTATTAGTTGGTTCAACACTTTATA
TGTTTGGTGGTTTCTCTTCAACACCATTAGATAGTTTATTCTCTTTAGAT
TTATTAAAAGATGAAAATTTAAATATATCACCTTCTCCAAATATTTAATA
AAAAAAAAAAATAAAATAAAATAAAATAAAAATGAAACCAAACGATTTTA
ACCGAAAA
Gap no gap
Contig length 608
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 1395895
End point 1396503
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U08448
List of clone(s) 

est1=SLC566E,1,609
Translated Amino Acid sequence 
GSDLVFLNDLFEYNTIENKWTQLKGTGDHPPQKCGHKLFNFGGKLLLFGGGYGSQWDIKY
NDVHIYDRSLNRWTKVKTKGEINVCTFTVSWSVGPFLFIYGGQSVKDDLLTNDLYMLDTV
NMEWSSINTNCTPFPRDMGSGVLVGSTLYMFGGFSSTPLDSLFSLDLLKDENLNISPSPN
I**kkkik*nkikmkpndfnrk
Translated Amino Acid sequence (All Frames) 
Frame A:
mvvi*yf*miyssiil*ringpn*rvlatthlrnavisysisvvnyyylvvdmahngiln
immfismtdl*iggqklkqrekstfvhlllvgvlvhffssmvvnllkmiy*lmisic*il
*iwngvlsiqivhlfhviwvlvy*lvqhficlvvslqhh*ivysl*iy*kmki*iyhllq
ifnkkkk*nkik*k*nqtilte


Frame B:
w**fsifk*firv*yyre*mdpikgywrpptsemrs*aiqfrw*iiiiwwwiwltmgy*i
**csyl*qifk*vdks*nkgrnqrlyiyc*lecwsisfhlwwsic*r*sin**slyvryc
kygmefyqyklytfst*ygfwciswfntlyvwwflfntir*filfrfikr*kfkyitfsk
ylikkknkik*nknetkrf*pk


Frame C:
GSDLVFLNDLFEYNTIENKWTQLKGTGDHPPQKCGHKLFNFGGKLLLFGGGYGSQWDIKY
NDVHIYDRSLNRWTKVKTKGEINVCTFTVSWSVGPFLFIYGGQSVKDDLLTNDLYMLDTV
NMEWSSINTNCTPFPRDMGSGVLVGSTLYMFGGFSSTPLDSLFSLDLLKDENLNISPSPN
I**kkkik*nkikmkpndfnrk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U08448-1 (Contig-U08448-1Q)
/CSM_Contig/Contig-U08448-1Q.Seq.d
         (608 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U08448-1 (Contig-U08448-1Q) /CSM_Contig/Conti...  1088  0.0
Contig-U12691-1 (Contig-U12691-1Q) /CSM_Contig/Conti...    44  2e-04
Contig-U13208-1 (Contig-U13208-1Q) /CSM_Contig/Conti...    42  7e-04
Contig-U14051-1 (Contig-U14051-1Q) /CSM_Contig/Conti...    36  0.042
Contig-U13554-1 (Contig-U13554-1Q) /CSM_Contig/Conti...    36  0.042
Contig-U11739-1 (Contig-U11739-1Q) /CSM_Contig/Conti...    36  0.042
Contig-U11278-1 (Contig-U11278-1Q) /CSM_Contig/Conti...    36  0.042
Contig-U09736-1 (Contig-U09736-1Q) /CSM_Contig/Conti...    36  0.042
Contig-U05426-1 (Contig-U05426-1Q) /CSM_Contig/Conti...    36  0.042
Contig-U13400-1 (Contig-U13400-1Q) /CSM_Contig/Conti...    34  0.17

>Contig-U08448-1 (Contig-U08448-1Q) /CSM_Contig/Contig-U08448-1Q.Seq.d
          Length = 608

 Score = 1088 bits (549), Expect = 0.0
 Identities = 549/549 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtagtgatttagtatttttaaatgatttattcgagtataatactatagagaataaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atggtagtgatttagtatttttaaatgatttattcgagtataatactatagagaataaat 60

                                                                       
Query: 61  ggacccaattaaagggtactggcgaccacccacctcagaaatgcggtcataagctattca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggacccaattaaagggtactggcgaccacccacctcagaaatgcggtcataagctattca 120

                                                                       
Query: 121 atttcggtggtaaattattattatttggtggtggatatggctcacaatgggatattaaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atttcggtggtaaattattattatttggtggtggatatggctcacaatgggatattaaat 180

                                                                       
Query: 181 ataatgatgttcatatctatgacagatctttaaataggtggacaaaagttaaaacaaagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ataatgatgttcatatctatgacagatctttaaataggtggacaaaagttaaaacaaagg 240

                                                                       
Query: 241 gagaaatcaacgtttgtacatttactgttagttggagtgttggtccatttcttttcatct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagaaatcaacgtttgtacatttactgttagttggagtgttggtccatttcttttcatct 300

                                                                       
Query: 301 atggtggtcaatctgttaaagatgatctattaactaatgatctctatatgttagatactg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atggtggtcaatctgttaaagatgatctattaactaatgatctctatatgttagatactg 360

                                                                       
Query: 361 taaatatggaatggagttctatcaatacaaattgtacaccttttccacgtgatatgggtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taaatatggaatggagttctatcaatacaaattgtacaccttttccacgtgatatgggtt 420

                                                                       
Query: 421 ctggtgtattagttggttcaacactttatatgtttggtggtttctcttcaacaccattag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctggtgtattagttggttcaacactttatatgtttggtggtttctcttcaacaccattag 480

                                                                       
Query: 481 atagtttattctctttagatttattaaaagatgaaaatttaaatatatcaccttctccaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atagtttattctctttagatttattaaaagatgaaaatttaaatatatcaccttctccaa 540

                    
Query: 541 atatttaat 549
           |||||||||
Sbjct: 541 atatttaat 549


 Score = 52.0 bits (26), Expect = 7e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 583 tgaaaccaaacgattttaaccgaaaa 608
           ||||||||||||||||||||||||||
Sbjct: 583 tgaaaccaaacgattttaaccgaaaa 608


>Contig-U12691-1 (Contig-U12691-1Q) /CSM_Contig/Contig-U12691-1Q.Seq.d
          Length = 850

 Score = 44.1 bits (22), Expect = 2e-04
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 453 tttggtggtttctcttcaacaccatt 478
           |||||||||||||||||| |||||||
Sbjct: 209 tttggtggtttctcttcaccaccatt 184


>Contig-U13208-1 (Contig-U13208-1Q) /CSM_Contig/Contig-U13208-1Q.Seq.d
          Length = 635

 Score = 42.1 bits (21), Expect = 7e-04
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 433 ttggttcaacactttatatgtttggtggt 461
           ||||| ||| |||||||||||||||||||
Sbjct: 63  ttggtacaaaactttatatgtttggtggt 91


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 20,370
Number of Sequences: 6905
Number of extensions: 20370
Number of successful extensions: 2620
Number of sequences better than 10.0: 250
length of query: 608
length of database: 5,674,871
effective HSP length: 16
effective length of query: 592
effective length of database: 5,564,391
effective search space: 3294119472
effective search space used: 3294119472
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.13
Homology vs DNA 
Query= Contig-U08448-1 (Contig-U08448-1Q) /CSM_Contig/Contig-U08448-1Q.Seq.d
         (608 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AC115607) Dictyostelium discoideum chromosome 2 map 4559693...  1088   0.0    2
(AU060999) Dictyostelium discoideum slug cDNA, clone SLC566.     1088   0.0    1
(AU034312) Dictyostelium discoideum slug cDNA, clone SLC566.      735   0.0    2
(DX521502) GH_MBb0030A05f GH_MBb Gossypium hirsutum genomic ...    50   0.093  1
(ES749980) BGBV-aad64g12.b1 Snail_EST_pSMART Biomphalaria gl...    46   0.15   2
(BJ333173) Dictyostelium discoideum cDNA clone:dda41o17, 5' ...    44   0.15   2
(EK043752) 1092959537994 Global-Ocean-Sampling_GS-31-01-01-1...    48   0.37   1
(AM433440) Vitis vinifera contig VV78X138200.7, whole genome...    38   0.38   3
(U48271) Dictyostelium discoideum UbpA deubiquitinase mRNA, ...    44   0.65   2
(AX344574) Sequence 25 from Patent WO0200932.                      38   0.67   7
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470...    36   0.88   10
(CR382400) Plasmodium falciparum chromosome 6, complete sequ...    36   0.96   8
(BX546443) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    40   1.2    4
(AC138200) Mus musculus chromosome 3, clone RP23-438J19, com...    46   1.5    1
(AC109308) Mus musculus chromosome 3, clone RP24-459K16, com...    46   1.5    1
(AC210845) Pongo abelii BAC clone CH276-72J16 from chromosom...    46   1.5    1
(BX005195) Human DNA sequence from clone RP11-203I2 on chrom...    46   1.5    1
(AL954685) Human DNA sequence from clone RP11-237M21 on chro...    46   1.5    1
(AL953854) Human DNA sequence from clone RP11-211P14 on chro...    46   1.5    1
(AL592525) Human DNA sequence from clone RP11-111G23 on chro...    46   1.5    1
(AL353791) Human DNA sequence from clone RP11-475B17 on chro...    46   1.5    1
(AL353729) Human DNA sequence from clone RP11-290L7 on chrom...    46   1.5    1
(AC025861) Homo sapiens clone RP11-766D10, WORKING DRAFT SEQ...    46   1.5    1
(CU467658) Human DNA sequence *** SEQUENCING IN PROGRESS ***...    46   1.5    1
(AL954141) Human DNA sequence *** SEQUENCING CANCELLED *** f...    46   1.5    1
(AC211898) Pongo abelii chromosome UNKNOWN clone CH276-386F1...    46   1.5    1
(ER441618) 1092963815545 Global-Ocean-Sampling_GS-35-01-01-1...    46   1.5    1
(EJ124296) 1092343387137 Global-Ocean-Sampling_GS-27-01-01-1...    46   1.5    1
(AC131091) Homo sapiens chromosome UNK clone CTD-2021H7, WOR...    38   1.5    4
(CU468857) Pig DNA sequence from clone CH242-57B1 on chromos...    32   1.9    8
(CU638842) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   2.0    2
(AK033357) Mus musculus 16 days embryo lung cDNA, RIKEN full...    40   2.5    2
(CU633632) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   2.7    2
(CU151849) Pig DNA sequence from clone CH242-198O5 on chromo...    34   2.8    2
(CU468151) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   2.8    2
(CT287279) Sus scrofa genomic clone CH242-258A11, genomic su...    34   3.8    2
(AC117441) Homo sapiens 3 BAC RP11-803L18 (Roswell Park Canc...    42   4.3    4
(CU104688) Mouse DNA sequence from clone RP23-304F23 on chro...    34   4.4    8
(AC103571) Rattus norvegicus clone CH230-23O14, WORKING DRAF...    38   4.7    4
(AX345288) Sequence 359 from Patent WO0200928.                     38   4.7    3
(AC147662) Pan troglodytes chromosome UNK clone CH251-272J24...    40   4.8    3
(AL050333) Human DNA sequence from clone RP1-93K22 on chromo...    42   4.9    2
(BC125940) Danio rerio zgc:154042, mRNA (cDNA clone MGC:1540...    44   5.8    1
(AC206099) Mus musculus BAC clone RP24-371J13 from chromosom...    44   5.8    1
(AC193216) Mus musculus BAC clone CH36-151N21 from chromosom...    44   5.8    1
(AC192634) Mus musculus BAC clone RP24-355N14 from chromosom...    44   5.8    1
(AC192056) Mus musculus BAC clone CH36-325O14 from chromosom...    44   5.8    1
(AC183662) Mus musculus BAC clone RP24-452J21 from chromosom...    44   5.8    1
(AC182453) Mus musculus BAC clone RP24-220F23 from chromosom...    44   5.8    1
(AC177799) Mus musculus BAC clone RP24-374O22 from chromosom...    44   5.8    1
(AC175663) Mus musculus BAC clone RP24-430F7 from chromosome...    44   5.8    1
(AC175493) Mus musculus BAC clone RP24-70B12 from chromosome...    44   5.8    1
(AC163279) Mus musculus BAC clone RP24-112D16 from chromosom...    44   5.8    1
(AC151532) Mus musculus BAC clone RP24-279A12 from chromosom...    44   5.8    1
(AC135808) Mus musculus BAC clone RP24-316N5 from chromosome...    44   5.8    1
(AC131186) Mus musculus BAC clone RP24-150P7 from Y, complet...    44   5.8    1
(AC129774) Mus musculus BAC clone RP24-167G16 from chromosom...    44   5.8    1
(AC155884) Medicago truncatula chromosome 2 clone mth2-10d10...    44   5.8    1
(AC135798) Medicago truncatula clone mth2-31c16, complete se...    44   5.8    1
(AC150499) Bos taurus  BAC CH240-105M18 (Children's Hospital...    44   5.8    1
(AC090137) Homo sapiens chromosome 8, clone RP11-56A10, comp...    44   5.8    1
(AC149777) Bos taurus clone CH240-10E23, WORKING DRAFT SEQUE...    44   5.8    1
(AC120300) Rattus norvegicus clone CH230-34B15, *** SEQUENCI...    44   5.8    1
(AC113770) Rattus norvegicus clone CH230-33C5, WORKING DRAFT...    44   5.8    1
(AC099246) Rattus norvegicus clone CH230-193D24, *** SEQUENC...    44   5.8    1
(AC097904) Rattus norvegicus clone CH230-146J13, *** SEQUENC...    44   5.8    1
(AC097608) Rattus norvegicus clone CH230-177E10, WORKING DRA...    44   5.8    1
(AC087355) Homo sapiens chromosome 8 clone RP11-413O21 map 8...    44   5.8    1
(AC036232) Homo sapiens chromosome 17 clone RP11-60B4 map 17...    44   5.8    1
(AC026032) Homo sapiens chromosome 8 clone RP11-56A10, WORKI...    44   5.8    1
(AC229592) Mus musculus chromosome Y clone CH36-337J22, WORK...    44   5.8    1
(AC222563) Mus musculus chromosome Y clone CH36-426O1, WORKI...    44   5.8    1
(AC220068) Mus musculus chromosome Y clone RP24-180G4, WORKI...    44   5.8    1
(AC214055) Mus musculus chromosome Y clone CH36-489D15, WORK...    44   5.8    1
(AC212855) Mus musculus chromosome Y clone CH36-190D12, WORK...    44   5.8    1
(AC202837) Mus musculus chromosome Y clone CH36-186F2, WORKI...    44   5.8    1
(AC202050) Mus musculus chromosome Y clone CH36-142O22, WORK...    44   5.8    1
(AC201929) Mus musculus chromosome Y clone CH36-14F17, *** S...    44   5.8    1
(AC201227) Strongylocentrotus purpuratus clone R3-15I4, WORK...    44   5.8    1
(AC200642) Mus musculus chromosome Y clone CH36-440P21, WORK...    44   5.8    1
(AC184190) Strongylocentrotus purpuratus clone R3-3020G20, W...    44   5.8    1
(AC025236) Homo sapiens chromosome 8 clone RP11-413O21, WORK...    44   5.8    1
(DH821668) Rattus norvegicus DNA, BAC clone: RNB1-425L19, 3'...    44   5.8    1
(DH629034) Rattus norvegicus DNA, BAC clone: RNB1-164I18, 5'...    44   5.8    1
(CT376423) Sus scrofa genomic clone CH242-437K3, genomic sur...    44   5.8    1
(CT233768) Sus scrofa genomic clone CH242-257M4, genomic sur...    44   5.8    1
(BZ182183) CH230-524A13.TV CHORI-230 Segment 2 Rattus norveg...    44   5.8    1
(BW558260) Ciona savignyi cDNA, clone:cslv005c11, 3'end, sin...    44   5.8    1
(BW557478) Ciona savignyi cDNA, clone:cslv001a19, 3'end, sin...    44   5.8    1
(CP000524) Bartonella bacilliformis KC583, complete genome.        44   5.8    1
(AC193000) Pan troglodytes BAC clone CH251-451H14 from chrom...    36   6.6    4
(AC215398) Solanum lycopersicum chromosome 2 clone C02HBa015...    40   6.9    4
(BJ328625) Dictyostelium discoideum cDNA clone:dda28j23, 5' ...    32   7.1    2
(AC184083) Populus trichocarpa clone Pop1-56J5, complete seq...    42   7.1    2
(AR102786) Sequence 1 from patent US 6087105.                      28   7.2    4
(U34622) Campylobacter jejuni invasion phenotype protein (ci...    28   7.2    4
(ES750053) BGBV-aad65a02.b1 Snail_EST_pSMART Biomphalaria gl...    40   7.4    2
(DI049443) HUMAN SCHIZOPHRENIA GENE.                               32   8.8    2
(DI046388) HUMAN SCHIZOPHRENIA GENE.                               32   8.8    2
(DD062477) HUMAN SCHIZOPHRENIA GENE.                               32   8.8    2

>(AC115607) Dictyostelium discoideum chromosome 2 map 4559693-4624405
             strain AX4, complete sequence.
          Length = 64707

 Score = 1088 bits (549), Expect(2) = 0.0
 Identities = 549/549 (100%)
 Strand = Plus / Plus


Query: 1     atggtagtgatttagtatttttaaatgatttattcgagtataatactatagagaataaat 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12044 atggtagtgatttagtatttttaaatgatttattcgagtataatactatagagaataaat 12103


Query: 61    ggacccaattaaagggtactggcgaccacccacctcagaaatgcggtcataagctattca 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12104 ggacccaattaaagggtactggcgaccacccacctcagaaatgcggtcataagctattca 12163


Query: 121   atttcggtggtaaattattattatttggtggtggatatggctcacaatgggatattaaat 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12164 atttcggtggtaaattattattatttggtggtggatatggctcacaatgggatattaaat 12223


Query: 181   ataatgatgttcatatctatgacagatctttaaataggtggacaaaagttaaaacaaagg 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12224 ataatgatgttcatatctatgacagatctttaaataggtggacaaaagttaaaacaaagg 12283


Query: 241   gagaaatcaacgtttgtacatttactgttagttggagtgttggtccatttcttttcatct 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12284 gagaaatcaacgtttgtacatttactgttagttggagtgttggtccatttcttttcatct 12343


Query: 301   atggtggtcaatctgttaaagatgatctattaactaatgatctctatatgttagatactg 360
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12344 atggtggtcaatctgttaaagatgatctattaactaatgatctctatatgttagatactg 12403


Query: 361   taaatatggaatggagttctatcaatacaaattgtacaccttttccacgtgatatgggtt 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12404 taaatatggaatggagttctatcaatacaaattgtacaccttttccacgtgatatgggtt 12463


Query: 421   ctggtgtattagttggttcaacactttatatgtttggtggtttctcttcaacaccattag 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12464 ctggtgtattagttggttcaacactttatatgtttggtggtttctcttcaacaccattag 12523


Query: 481   atagtttattctctttagatttattaaaagatgaaaatttaaatatatcaccttctccaa 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12524 atagtttattctctttagatttattaaaagatgaaaatttaaatatatcaccttctccaa 12583


Query: 541   atatttaat 549
             |||||||||
Sbjct: 12584 atatttaat 12592

 Score = 44.1 bits (22), Expect(2) = 0.0
 Identities = 22/22 (100%)
 Strand = Plus / Plus


Query: 584   gaaaccaaacgattttaaccga 605
             ||||||||||||||||||||||
Sbjct: 12627 gaaaccaaacgattttaaccga 12648

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 712,734,266
Number of extensions: 47996302
Number of successful extensions: 4129026
Number of sequences better than 10.0: 106
Length of query: 608
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 585
Effective length of database: 93,106,754,628
Effective search space: 54467451457380
Effective search space used: 54467451457380
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 6.24
Homology vs Protein 
Query= Contig-U08448-1 (Contig-U08448-1Q) /CSM_Contig/Contig-U08448-1Q.Seq.d
         (608 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC115607_4(AC115607|pid:none) Dictyostelium discoideum chromosom...   287   2e-76
AK097719_1(AK097719|pid:none) Homo sapiens cDNA FLJ40400 fis, cl...    59   1e-07
EU956778_1(EU956778|pid:none) Zea mays clone 1573668 kelch motif...    56   7e-07
AC092557_12(AC092557|pid:none) Oryza sativa chromosome 3 BAC OSJ...    56   7e-07
BT060837_1(BT060837|pid:none) Zea mays full-length cDNA clone ZM...    56   7e-07
AP003578_15(AP003578|pid:none) Oryza sativa Japonica Group genom...    55   1e-06
BC068372_1(BC068372|pid:none) Danio rerio zgc:85727, mRNA (cDNA ...    55   1e-06
BT069267_1(BT069267|pid:none) Zea mays full-length cDNA clone ZM...    55   2e-06
(Q9BQ90) RecName: Full=Kelch domain-containing protein 3; AltNam...    54   3e-06
BC009460_1(BC009460|pid:none) Homo sapiens kelch domain containi...    54   3e-06
BT066948_1(BT066948|pid:none) Zea mays full-length cDNA clone ZM...    54   4e-06
(Q58CV6) RecName: Full=Kelch domain-containing protein 3;  &BC10...    53   8e-06
BT021774_1(BT021774|pid:none) Bos taurus kelch domain containing...    53   8e-06
AK004964_1(AK004964|pid:none) Mus musculus adult male liver cDNA...    52   1e-05
(Q6AYI2) RecName: Full=Kelch domain-containing protein 3;  &BC07...    52   1e-05
AM440167_1(AM440167|pid:none) Vitis vinifera contig VV78X156992....    52   1e-05
CR956379_15(CR956379|pid:none) Pig DNA sequence from clone CH242...    51   2e-05
CR956379_13(CR956379|pid:none) Pig DNA sequence from clone CH242...    51   2e-05
CR956379_16(CR956379|pid:none) Pig DNA sequence from clone CH242...    51   2e-05
BT083991_1(BT083991|pid:none) Zea mays full-length cDNA clone ZM...    51   2e-05
AE014298_1261(AE014298|pid:none) Drosophila melanogaster chromos...    50   5e-05
AC009176_17(AC009176|pid:none) Arabidopsis thaliana chromosome I...    50   5e-05
AY160095_1(AY160095|pid:none) Dictyostelium discoideum nucleotid...    49   1e-04
(Q5ZJ37) RecName: Full=Rab9 effector protein with Kelch motifs; ...    49   1e-04
(Q8H4D4) RecName: Full=tRNA wybutosine-synthesizing protein 2/3/...    48   2e-04
AY087364_1(AY087364|pid:none) Arabidopsis thaliana clone 34594 m...    48   2e-04
BT070700_1(BT070700|pid:none) Picea sitchensis clone WS02745_C17...    47   4e-04
EF677521_1(EF677521|pid:none) Picea sitchensis clone WS02770_B01...    47   4e-04
(Q93XW5) RecName: Full=Nitrile-specifier protein 5;          Sho...    47   4e-04
EF084571_1(EF084571|pid:none) Picea sitchensis clone WS02720_C14...    47   4e-04
AK226209_1(AK226209|pid:none) Arabidopsis thaliana mRNA for RanG...    47   5e-04
AY085861_1(AY085861|pid:none) Arabidopsis thaliana clone 19110 m...    47   5e-04
BC082658_1(BC082658|pid:none) Xenopus laevis hypothetical LOC494...    47   5e-04
BC159021_1(BC159021|pid:none) Xenopus tropicalis hypothetical pr...    46   7e-04
(O49326) RecName: Full=Nitrile-specifier protein 2;          Sho...    46   7e-04
BC153781_1(BC153781|pid:none) Xenopus laevis hypothetical protei...    46   7e-04
(Q9SDM9) RecName: Full=Nitrile-specifier protein 1;          Sho...    46   0.001
CR940353_551(CR940353|pid:none) Theileria annulata strain Ankara...    46   0.001
AK316853_1(AK316853|pid:none) Arabidopsis thaliana AT5G18590 mRN...    45   0.002
AC154090_8(AC154090|pid:none) Medicago truncatula clone mth2-92k...    45   0.002
EU973128_1(EU973128|pid:none) Zea mays clone 393745 unknown mRNA.      45   0.002
(O04316) RecName: Full=Nitrile-specifier protein 4;          Sho...    45   0.002
BT061032_1(BT061032|pid:none) Zea mays full-length cDNA clone ZM...    45   0.002
BT055017_1(BT055017|pid:none) Zea mays full-length cDNA clone ZM...    45   0.002
AF214574_1(AF214574|pid:none) Arabidopsis thaliana myrosinase-bi...    45   0.002
(P80197) RecName: Full=Actin-fragmin kinase;          Short=AFK;...    45   0.002
BT070350_1(BT070350|pid:none) Picea sitchensis clone WS02721_L10...    44   0.003
BC139848_1(BC139848|pid:none) Danio rerio host cell factor C1a, ...    44   0.003
AP005578_9(AP005578|pid:none) Oryza sativa Japonica Group genomi...    44   0.003
AL672002_20(AL672002|pid:none) Mouse DNA sequence from clone RP2...    44   0.004
AL672002_21(AL672002|pid:none) Mouse DNA sequence from clone RP2...    44   0.004
BC063435_1(BC063435|pid:none) Homo sapiens host cell factor C1 (...    44   0.004
AK088827_1(AK088827|pid:none) Mus musculus 2 days neonate thymus...    44   0.004
(Q61191) RecName: Full=Host cell factor; AltName: Full=HCF-1;   ...    44   0.004
U80821_1(U80821|pid:none) Mus musculus C1 transcription factor g...    44   0.004
(P51610) RecName: Full=Host cell factor; AltName: Full=HCF-1;   ...    44   0.004
BX571687_5(BX571687|pid:none) Zebrafish DNA sequence from clone ...    44   0.004
AK132817_1(AK132817|pid:none) Mus musculus adult male testis cDN...    44   0.005
AC024801_9(AC024801|pid:none) Caenorhabditis elegans cosmid Y50D...    44   0.005
AB023039_6(AB023039|pid:none) Arabidopsis thaliana genomic DNA, ...    44   0.005
(Q9CQ33) RecName: Full=Leucine-zipper-like transcriptional regul...    44   0.005
AK296347_1(AK296347|pid:none) Homo sapiens cDNA FLJ53345 complet...    44   0.005
CR548612_211(CR548612|pid:none) Paramecium tetraurelia macronucl...    44   0.005
BC056132_1(BC056132|pid:none) Xenopus laevis kelch domain contai...    44   0.005
AK083411_1(AK083411|pid:none) Mus musculus 9 days embryo whole b...    44   0.005
(Q8N653) RecName: Full=Leucine-zipper-like transcriptional regul...    44   0.005
Z97074_1(Z97074|pid:none) Homo sapiens mRNA for Rab9 effector p4...    43   0.006
BC047023_1(BC047023|pid:none) Homo sapiens Rab9 effector protein...    43   0.006
AK317016_1(AK317016|pid:none) Arabidopsis thaliana AT2G36360 mRN...    43   0.006
BC065725_1(BC065725|pid:none) Homo sapiens Rab9 effector protein...    43   0.006
AP008209_3177(AP008209|pid:none) Oryza sativa (japonica cultivar...    43   0.006
CR456837_1(CR456837|pid:none) Homo sapiens full open reading fra...    43   0.006
AK100499_1(AK100499|pid:none) Oryza sativa Japonica Group cDNA c...    43   0.006
AC079678_5(AC079678|pid:none) Arabidopsis thaliana chromosome 1 ...    43   0.006
FJ374638_1(FJ374638|pid:none) Brassica rapa subsp. pekinensis ep...    43   0.006
BT054403_1(BT054403|pid:none) Zea mays full-length cDNA clone ZM...    43   0.008
AM910994_458(AM910994|pid:none) Plasmodium knowlesi strain H chr...    43   0.008
CU633438_482(CU633438|pid:none) Podospora anserina genomic DNA c...    42   0.010
CR940347_1105(CR940347|pid:none) Theileria annulata strain Ankar...    42   0.010
(P15258) RecName: Full=Protein ral2;  &A33827(A33827;T39887) &AL...    42   0.013
BX842633_2(BX842633|pid:none) Neurospora crassa DNA linkage grou...    42   0.013
BC166344_1(BC166344|pid:none) Xenopus tropicalis hypothetical pr...    42   0.013
AL929106_6(AL929106|pid:none) Mouse DNA sequence from clone RP23...    42   0.013
AL929106_7(AL929106|pid:none) Mouse DNA sequence from clone RP23...    42   0.013
(Q8VCH5) RecName: Full=Rab9 effector protein with Kelch motifs; ...    42   0.013
BC070638_1(BC070638|pid:none) Xenopus laevis hypothetical protei...    42   0.013
(Q9Y5Z7) RecName: Full=Host cell factor 2;          Short=HCF-2;...    42   0.017
AF149414_4(AF149414|pid:none) Arabidopsis thaliana BAC T19J18.  ...    42   0.017
(Q8W4K1) RecName: Full=tRNA wybutosine-synthesizing protein 2/3/...    42   0.017
AC115604_14(AC115604|pid:none) Dictyostelium discoideum chromoso...    41   0.023
BC041793_1(BC041793|pid:none) Homo sapiens kelch domain containi...    41   0.023
EU404423_1(EU404423|pid:none) Arabidopsis thaliana ecotype REN-1...    41   0.030
EU404381_1(EU404381|pid:none) Arabidopsis thaliana ecotype RMX-A...    41   0.030
EU404378_1(EU404378|pid:none) Arabidopsis thaliana ecotype RRS-1...    41   0.030
EU404441_1(EU404441|pid:none) Arabidopsis thaliana ecotype Br-0 ...    41   0.030
EU404432_1(EU404432|pid:none) Arabidopsis thaliana ecotype Nd-1 ...    41   0.030
AF416786_1(AF416786|pid:none) Arabidopsis thaliana epithiospecif...    41   0.030
EU404431_1(EU404431|pid:none) Arabidopsis thaliana ecotype LER-1...    41   0.030
BT065676_1(BT065676|pid:none) Zea mays full-length cDNA clone ZM...    41   0.030
EU404468_1(EU404468|pid:none) Arabidopsis thaliana ecotype Ms-0 ...    41   0.030
EU404457_1(EU404457|pid:none) Arabidopsis thaliana ecotype Wa-1 ...    41   0.030
EU404417_1(EU404417|pid:none) Arabidopsis thaliana ecotype Tamm-...    41   0.030
EU404379_1(EU404379|pid:none) Arabidopsis thaliana ecotype Knox-...    41   0.030
EU404426_1(EU404426|pid:none) Arabidopsis thaliana ecotype Uod-7...    41   0.030
BC124660_1(BC124660|pid:none) Danio rerio zgc:153342, mRNA (cDNA...    41   0.030
AY074550_1(AY074550|pid:none) Arabidopsis thaliana putative jasm...    41   0.030
(O04318) RecName: Full=Nitrile-specifier protein 3;          Sho...    40   0.039
AL929603_76(AL929603|pid:none) Trypanosoma brucei chromosome 1, ...    40   0.039
EU404471_1(EU404471|pid:none) Arabidopsis thaliana ecotype Oy-0 ...    40   0.039
AF412043_1(AF412043|pid:none) Arabidopsis thaliana AT5g04420/T32...    40   0.039
CP000586_145(CP000586|pid:none) Ostreococcus lucimarinus CCE9901...    40   0.039
AK317314_1(AK317314|pid:none) Arabidopsis thaliana AT5G04420 mRN...    40   0.039
DQ059298_1(DQ059298|pid:none) Brassica oleracea var. italica epi...    40   0.051
(Q6AXB2) RecName: Full=Rab9 effector protein with Kelch motifs; ...    40   0.051
AY835383_1(AY835383|pid:none) Danio rerio kelch repeat-containin...    40   0.066
EU404458_1(EU404458|pid:none) Arabidopsis thaliana ecotype Fei-0...    40   0.066
EU404462_1(EU404462|pid:none) Arabidopsis thaliana ecotype Pro-0...    40   0.066
FM992688_14(FM992688|pid:none) Candida dubliniensis CD36 chromos...    40   0.066
EU404389_1(EU404389|pid:none) Arabidopsis thaliana ecotype Fab-2...    40   0.066
CT005259_21(CT005259|pid:none) Leishmania major strain Friedlin,...    39   0.087
AM502238_23(AM502238|pid:none) Leishmania infantum chromosome 20.      39   0.087
BC012987_1(BC012987|pid:none) Homo sapiens kelch domain containi...    39   0.11
CP000512_375(CP000512|pid:none) Acidovorax citrulli AAC00-1, com...    39   0.11
CU633899_57(CU633899|pid:none) Podospora anserina genomic DNA ch...    39   0.15
BC155757_1(BC155757|pid:none) Danio rerio si:dkey-98f17.2, mRNA ...    39   0.15
AE014187_647(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    39   0.15
AF412054_1(AF412054|pid:none) Arabidopsis thaliana AT5g50310/MXI...    38   0.19
AE010300_1758(AE010300|pid:none) Leptospira interrogans serovar ...    38   0.19
BC048880_1(BC048880|pid:none) Danio rerio kelch domain containin...    38   0.19
AM437230_1(AM437230|pid:none) Vitis vinifera contig VV78X027677....    38   0.19
AL606623_6(AL606623|pid:none) Oryza sativa genomic DNA, chromoso...    38   0.19
AM910994_394(AM910994|pid:none) Plasmodium knowlesi strain H chr...    38   0.25
(Q28DE7) RecName: Full=Kelch domain-containing protein 10;             38   0.25
X79198_1(X79198|pid:none) H.sapiens HCF-1 gene.                        38   0.25
CR855555_1(CR855555|pid:none) Xenopus tropicalis finished cDNA, ...    38   0.25
AJ622827_1(AJ622827|pid:none) Emericella nidulans teaA gene for ...    37   0.33
AM270133_44(AM270133|pid:none) Aspergillus niger contig An07c016...    37   0.33
BC073038_1(BC073038|pid:none) Xenopus laevis MGC82652 protein, m...    37   0.33
AM746676_2058(AM746676|pid:none) Sorangium cellulosum 'So ce 56'...    37   0.33
AJ437480_3(AJ437480|pid:none) Paramecium tetraurelia partial npe...    37   0.33
AE013599_3555(AE013599|pid:none) Drosophila melanogaster chromos...    37   0.43
T29816(T29816)hypothetical protein C46A5.9 - Caenorhabditis eleg...    37   0.43
AF072907_1(AF072907|pid:none) Caenorhabditis elegans host cell f...    37   0.43
BC082451_1(BC082451|pid:none) Xenopus laevis MGC84191 protein, m...    37   0.43
FM992691_525(FM992691|pid:none) Candida dubliniensis CD36 chromo...    37   0.56
U88869_1(U88869|pid:none) Plasmodium falciparum protein serine/t...    37   0.56
AE014187_628(AE014187|pid:none) Plasmodium falciparum 3D7 chromo...    37   0.56
CP000875_818(CP000875|pid:none) Herpetosiphon aurantiacus ATCC 2...    37   0.56
CP001159_136(CP001159|pid:none) Thalassiosira pseudonana CCMP133...    37   0.56
AK023986_1(AK023986|pid:none) Homo sapiens cDNA FLJ13924 fis, cl...    36   0.73
AK055598_1(AK055598|pid:none) Homo sapiens cDNA FLJ31036 fis, cl...    36   0.73
(Q8TBB5) RecName: Full=Kelch domain-containing protein 4;  &BC02...    36   0.73
(Q4V8F4) RecName: Full=Rab9 effector protein with Kelch motifs; ...    36   0.73
AM920427_1649(AM920427|pid:none) Penicillium chrysogenum Wiscons...    36   0.73
AB037753_1(AB037753|pid:none) Homo sapiens mRNA for KIAA1332 pro...    36   0.73
(Q6P3S6) RecName: Full=F-box only protein 42;  &AB384595_1(AB384...    36   0.73
BC043410_1(BC043410|pid:none) Homo sapiens F-box protein 42, mRN...    36   0.73
AK009481_1(AK009481|pid:none) Mus musculus adult male tongue cDN...    36   0.96
AK051418_1(AK051418|pid:none) Mus musculus 12 days embryo spinal...    36   0.96
(Q3KRE6) RecName: Full=Kelch domain-containing protein 2;  &BC10...    36   0.96
AX405888_1(AX405888|pid:none) Sequence 303 from Patent WO0222660.      36   0.96
BX161429_1(BX161429|pid:none) human full-length cDNA clone CS0DI...    36   0.96
CR457205_1(CR457205|pid:none) Homo sapiens full open reading fra...    36   0.96
EU686636_1(EU686636|pid:none) Uncultured marine group III euryar...    36   0.96
CP000593_247(CP000593|pid:none) Ostreococcus lucimarinus CCE9901...    35   1.3
BT038562_1(BT038562|pid:none) Zea mays full-length cDNA clone ZM...    35   1.3
BC001044_1(BC001044|pid:none) Homo sapiens kelch domain containi...    35   1.3
AM910991_203(AM910991|pid:none) Plasmodium knowlesi strain H chr...    35   1.6
DQ174778_1(DQ174778|pid:none) Toxoplasma gondii leucine zipper-l...    35   1.6
FN357293_25(FN357293|pid:none) Schistosoma mansoni genome sequen...    35   1.6
DQ923399_1(DQ923399|pid:none) Triticum aestivum FKF1 protein mRN...    35   1.6
AE014188_54(AE014188|pid:none) Plasmodium falciparum 3D7 chromos...    35   1.6
AY513272_1(AY513272|pid:none) Mus musculus endothelial different...    35   1.6
AY808550_1(AY808550|pid:none) Schistosoma japonicum SJCHGC03295 ...    35   2.1
(Q5R8W1) RecName: Full=Kelch domain-containing protein 4;  &CR85...    35   2.1
AY337016_1(AY337016|pid:none) Brassica rapa subsp. pekinensis cl...    35   2.1
AL844507_240(AL844507|pid:none) Plasmodium falciparum 3D7 chromo...    35   2.1
BT054764_1(BT054764|pid:none) Zea mays full-length cDNA clone ZM...    35   2.1
BC062489_1(BC062489|pid:none) Xenopus tropicalis kelch domain co...    35   2.1
AB055250_1(AB055250|pid:none) Macaca fascicularis brain cDNA, cl...    35   2.1
(O14248) RecName: Full=Tip elongation aberrant protein 3; AltNam...    35   2.1
(P50090) RecName: Full=Kelch repeat-containing protein 2;  &AY69...    35   2.1
BC093264_1(BC093264|pid:none) Danio rerio zgc:112202, mRNA (cDNA...    34   2.8
BX511265_17(BX511265|pid:none) Zebrafish DNA sequence from clone...    34   2.8
(Q4KLM4) RecName: Full=Ectoderm-neural cortex protein 2;        ...    34   2.8
AP008217_1077(AP008217|pid:none) Oryza sativa (japonica cultivar...    34   2.8
(Q4G5Y1) RecName: Full=Kelch domain-containing protein 2; AltNam...    34   2.8
BX908811_15(BX908811|pid:none) Neurospora crassa DNA linkage gro...    34   3.6
AJ566620_1(AJ566620|pid:none) Paramecium tetraurelia macronuclea...    34   3.6
AM270234_24(AM270234|pid:none) Aspergillus niger contig An11c017...    33   4.8
AJ851426_1(AJ851426|pid:none) Gallus gallus mRNA for hypothetica...    33   4.8
D87454_1(D87454|pid:none) Human mRNA for KIAA0265 gene, partial ...    33   6.2
AP007163_61(AP007163|pid:none) Aspergillus oryzae RIB40 genomic ...    33   6.2
AM502252_189(AM502252|pid:none) Leishmania infantum chromosome 34.     33   6.2
BC139565_1(BC139565|pid:none) Danio rerio zgc:162310, mRNA (cDNA...    33   6.2
AM910991_292(AM910991|pid:none) Plasmodium knowlesi strain H chr...    33   6.2
(Q6PID8) RecName: Full=Kelch domain-containing protein 10;  &BC0...    33   6.2
(Q5U3Y0) RecName: Full=Kelch domain-containing protein 10;  &AK0...    33   8.1
(Q6PAR0) RecName: Full=Kelch domain-containing protein 10;  &BC0...    33   8.1
AK010783_1(AK010783|pid:none) Mus musculus ES cells cDNA, RIKEN ...    33   8.1
AK085130_1(AK085130|pid:none) Mus musculus 13 days embryo lung c...    33   8.1
AM270075_11(AM270075|pid:none) Aspergillus niger contig An04c014...    33   8.1
BC119567_1(BC119567|pid:none) Mus musculus kelch domain containi...    33   8.1
AP008214_548(AP008214|pid:none) Oryza sativa (japonica cultivar-...    33   8.1

>AC115607_4(AC115607|pid:none) Dictyostelium discoideum chromosome 2
           map 4559693-4624405 strain AX4, complete sequence.
          Length = 447

 Score =  287 bits (734), Expect = 2e-76
 Identities = 139/173 (80%), Positives = 139/173 (80%)
 Frame = +3

Query: 3   GSDLVFLNDLFEYNTIENKWTQLKGTGDHPPQKCXXXXXXXXXXXXXXXXXXXSQWDIKY 182
           GSDLVFLNDLFEYNTIENKWTQLKGTGDHPPQKC                   SQWDIKY
Sbjct: 267 GSDLVFLNDLFEYNTIENKWTQLKGTGDHPPQKCGHKLFNFGGKLLLFGGGYGSQWDIKY 326

Query: 183 NDVHIYDRSLNRWTKVKTKGEINVCTFTVSWSVGPFLFIYGGQSVKDDLLTNDLYMLDTV 362
           NDVHIYDRSLNRWTKVKTKGEINVCTFTVSWSVGPFLFIYGGQSVKDDLLTNDLYMLDTV
Sbjct: 327 NDVHIYDRSLNRWTKVKTKGEINVCTFTVSWSVGPFLFIYGGQSVKDDLLTNDLYMLDTV 386

Query: 363 NMEWSSINTNCTPFPRDMGSGVLVGSTLYMFGGXXXXXXXXXXXXXXXKDENL 521
           NMEWSSINTNCTPFPRDMGSGVLVGSTLYMFGG               KDENL
Sbjct: 387 NMEWSSINTNCTPFPRDMGSGVLVGSTLYMFGGFSSTPLDSLFSLDLLKDENL 439

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 845,891,333
Number of extensions: 14594812
Number of successful extensions: 33612
Number of sequences better than 10.0: 208
Number of HSP's gapped: 33381
Number of HSP's successfully gapped: 346
Length of query: 202
Length of database: 1,040,966,779
Length adjustment: 122
Effective length of query: 80
Effective length of database: 650,044,009
Effective search space: 52003520720
Effective search space used: 52003520720
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
PSORT 

 psg: 0.75  gvh: 0.59  alm: 0.38  top: 0.53  tms: 0.00  mit: 0.20  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: cytoplasmic
	 32.0 %: nuclear
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: Golgi

>> prediction for Contig-U08448-1 is cyt
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0