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Dicty_cDB
Contig List | Clone List | cDNA Library List
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U01506-1
Contig ID Contig-U01506-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U01506-1 (Contig-U01506-1Q) /CSM_Contig/Contig-U01506-1Q.Seq.d
TAATAATAATAATAATAATAATAATAATATGAGCTTATCCCCGGTTTCAA
CCCTTTTAATAAATCCATTGGGAAATGTTGTTTATGGTAATCCATCCTCA
CCAACATCAACTTCATCATCATCATCCCTAACACCAACATCAACCAACGA
AGAAATGATAAAGAAAGAAGTTAGTGGTACAAGTGAACCATCATCACCTT
CTACAGGTGAGTGTTACGGTAAAAAAAGCATAAATAAAAAAATAATAATA
AAAAAACAATATAATAATAAAAAATTAAAAATCTAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAA
Gap no gap
Contig length 323
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 3295406
End point 3295289
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U01506
List of clone(s) 

est1=SSA259Z,1,324
Translated Amino Acid sequence 
NNNNNNNNNMSLSPVSTLLINPLGNVVYGNPSSPTSTSSSSSLTPTSTNEEMIKKEVSGT
SEPSSPSTGECYGKKSINKKIIIKKQYNNKKLKI*kkkkkkkkkkkk
Translated Amino Acid sequence (All Frames) 
Frame A:
*********yelipgfnpfnksigkcclw*siltninfiiiipntninqrrndkers*wy
k*tiitfyr*vlr*kkhk*knnnkkti***kiknlkkkkkkkkkkkk


Frame B:
NNNNNNNNNMSLSPVSTLLINPLGNVVYGNPSSPTSTSSSSSLTPTSTNEEMIKKEVSGT
SEPSSPSTGECYGKKSINKKIIIKKQYNNKKLKI*kkkkkkkkkkkk


Frame C:
iiiiiiiii*ayprfqpf**ihwemlfmvihphqhqlhhhhp*hqhqptkk**rkklvvq
vnhhhllqvsvtvkka*ikk***knniiikn*kskkkkkkkkkkkkk
own update 2004. 6. 7
Homology vs CSM-cDNA 
Query= Contig-U01506-1 (Contig-U01506-1Q)
/CSM_Contig/Contig-U01506-1Q.Seq.d
         (323 letters)

Database: CSM
           8361 sequences; 7,895,291 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U01506-1 (Contig-U01506-1Q) /CSM_Contig/Conti...   377  e-105
Contig-U12522-1 (Contig-U12522-1Q) /CSM_Contig/Conti...    44  1e-04
Contig-U10804-1 (Contig-U10804-1Q) /CSM_Contig/Conti...    44  1e-04
Contig-U04626-1 (Contig-U04626-1Q) /CSM_Contig/Conti...    44  1e-04
Contig-U14522-1 (Contig-U14522-1Q) /CSM_Contig/Conti...    42  5e-04
Contig-U11541-1 (Contig-U11541-1Q) /CSM_Contig/Conti...    42  5e-04
Contig-U11515-1 (Contig-U11515-1Q) /CSM_Contig/Conti...    42  5e-04
Contig-U10893-1 (Contig-U10893-1Q) /CSM_Contig/Conti...    42  5e-04
Contig-U10675-1 (Contig-U10675-1Q) /CSM_Contig/Conti...    42  5e-04
Contig-U09471-1 (Contig-U09471-1Q) /CSM_Contig/Conti...    42  5e-04

>Contig-U01506-1 (Contig-U01506-1Q) /CSM_Contig/Contig-U01506-1Q.Seq.d
          Length = 323

 Score =  377 bits (190), Expect = e-105
 Identities = 190/190 (100%)
 Strand = Plus / Plus

                                                                       
Query: 30  tgagcttatccccggtttcaacccttttaataaatccattgggaaatgttgtttatggta 89
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30  tgagcttatccccggtttcaacccttttaataaatccattgggaaatgttgtttatggta 89

                                                                       
Query: 90  atccatcctcaccaacatcaacttcatcatcatcatccctaacaccaacatcaaccaacg 149
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90  atccatcctcaccaacatcaacttcatcatcatcatccctaacaccaacatcaaccaacg 149

                                                                       
Query: 150 aagaaatgataaagaaagaagttagtggtacaagtgaaccatcatcaccttctacaggtg 209
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 aagaaatgataaagaaagaagttagtggtacaagtgaaccatcatcaccttctacaggtg 209

                     
Query: 210 agtgttacgg 219
           ||||||||||
Sbjct: 210 agtgttacgg 219


>Contig-U12522-1 (Contig-U12522-1Q) /CSM_Contig/Contig-U12522-1Q.Seq.d
          Length = 1498

 Score = 44.1 bits (22), Expect = 1e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 105  catcaacttcatcatcatcatc 126
            ||||||||||||||||||||||
Sbjct: 1421 catcaacttcatcatcatcatc 1442


 Score = 30.2 bits (15), Expect = 1.9
 Identities = 18/19 (94%)
 Strand = Plus / Plus

                              
Query: 106 atcaacttcatcatcatca 124
           |||||| ||||||||||||
Sbjct: 852 atcaacatcatcatcatca 870


 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 113 tcatcatcatcatc 126
           ||||||||||||||
Sbjct: 877 tcatcatcatcatc 890


 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                          
Query: 113  tcatcatcatcatc 126
            ||||||||||||||
Sbjct: 1432 tcatcatcatcatc 1445


 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 113 tcatcatcatcatc 126
           ||||||||||||||
Sbjct: 874 tcatcatcatcatc 887


 Score = 28.2 bits (14), Expect = 7.5
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                          
Query: 113  tcatcatcatcatc 126
            ||||||||||||||
Sbjct: 1435 tcatcatcatcatc 1448


>Contig-U10804-1 (Contig-U10804-1Q) /CSM_Contig/Contig-U10804-1Q.Seq.d
          Length = 1746

 Score = 44.1 bits (22), Expect = 1e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 105 catcaacttcatcatcatcatc 126
           ||||||||||||||||||||||
Sbjct: 790 catcaacttcatcatcatcatc 811


 Score = 40.1 bits (20), Expect = 0.002
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 acatcaacttcatcatcatc 123
           ||||||||||||||||||||
Sbjct: 114 acatcaacttcatcatcatc 133


  Database: CSM
    Posted date:  Jun 7, 2004  8:33 AM
  Number of letters in database: 7,895,291
  Number of sequences in database:  8361
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7504
Number of Sequences: 8361
Number of extensions: 7504
Number of successful extensions: 2482
Number of sequences better than 10.0: 705
length of query: 323
length of database: 7,895,291
effective HSP length: 16
effective length of query: 307
effective length of database: 7,761,515
effective search space: 2382785105
effective search space used: 2382785105
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 4.29
Homology vs DNA 
Query= Contig-U01506-1 (Contig-U01506-1Q) /CSM_Contig/Contig-U01506-1Q.Seq.d
         (323 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(C25606) Dictyostelium discoideum slug cDNA, clone SSA259.        377   e-100  1
(AJ224893) Dictyostelium discoideum srfA gene.                    291   8e-75  1
(CK423615) AUF_IpSpn_68_m03 Spleen cDNA library Ictalurus pu...    42   0.011  2
(CT025772) Zebrafish DNA sequence from clone DKEY-261G4 in l...    52   0.013  1
(CR559945) Zebrafish DNA sequence from clone CH211-195E19 in...    52   0.013  1
(BX284670) Zebrafish DNA sequence from clone CH211-264D7 in ...    52   0.013  1
(AC134371) Rattus norvegicus clone CH230-125D15, *** SEQUENC...    52   0.013  1
(AC094844) Rattus norvegicus clone CH230-6B15, WORKING DRAFT...    52   0.013  1
(CT573379) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    52   0.013  1
(CK000041) AGENCOURT_16388202 NIH_ZGC_7 Danio rerio cDNA clo...    52   0.013  1
(CA474686) AGENCOURT_10700714 NCI_CGAP_ZKid1 Danio rerio cDN...    52   0.013  1
(AC152169) Mus musculus BAC clone RP23-79L13 from chromosome...    50   0.051  1
(AF093689) Dictyostelium discoideum MEK kinase alpha (mkkA) ...    50   0.051  1
(AC105186) Homo sapiens chromosome 8, clone CTD-2323A1, comp...    50   0.051  1
(AC226887) Oryza minuta clone OM__Ba0012I22, *** SEQUENCING ...    50   0.051  1
(ET437467) MUGQ_CH252P440K14Sp6_CP844_053 CHORI-252 Vervet M...    50   0.051  1
(CW674453) OP__Ba0065K11.f OP__Ba Oryza punctata genomic clo...    50   0.051  1
(CW264752) 104_733_11231475_148_35249_004 Sorghum methylatio...    50   0.051  1
(CW115276) 104_490_11106463_116_34592_026 Sorghum methylatio...    50   0.051  1
(CL170397) 104_371_10813783_148_31790_103 Sorghum methylatio...    50   0.051  1
(AG142178) Pan troglodytes DNA, clone: RP43-002H21.TJ.             50   0.051  1
(EH015027) USDA-FP_187669 Lysiphlebus testaceipes adult whol...    50   0.051  1
(EY933586) RS1EA57TF RS1(AR) Raphanus sativus var. oleiformi...    50   0.051  1
(EY931393) RS1DL73TF RS1(AR) Raphanus sativus var. oleiformi...    50   0.051  1
(EY929019) RS1EA57JQ RS1(AR) Raphanus sativus var. oleiformi...    50   0.051  1
(EY927364) RS1DL73JQ RS1(AR) Raphanus sativus var. oleiformi...    50   0.051  1
(EV144500) 0210434 Brassica napus Very early anther Brassica...    50   0.051  1
(DT093491) JGI_ANNN657.fwd ANNN Pimephales promelas Whole (L...    36   0.19   2
(DQ889039) Paralichthys olivaceus microsatellite Poli1476TUF...    48   0.20   1
(AP004902) Lotus japonicus genomic DNA, chromosome 2, clone:...    48   0.20   1
(AC131887) Rattus norvegicus clone CH230-3M14, WORKING DRAFT...    48   0.20   1
(AP010598) Lotus japonicus genomic DNA, chromosome 2, clone:...    48   0.20   1
(AC207959) Triticum aestivum clone TAACSPALLhA_2444K23, *** ...    48   0.20   1
(AC180351) Strongylocentrotus purpuratus clone R3-3118A14, W...    48   0.20   1
(AC179260) Strongylocentrotus purpuratus clone R3-42O21, WOR...    48   0.20   1
(EC359366) IMMUNEF088807K18 POSSUM_01-C-POSSUM-IMMUNE-2KB Tr...    48   0.20   1
(EC351203) LIVERF089496M13 POSSUM_01-POSSUM-LIVER-2KB Tricho...    48   0.20   1
(EC346580) LIVERF089543M22 POSSUM_01-POSSUM-LIVER-2KB Tricho...    48   0.20   1
(DY613260) IMMUNEF045821P12 POSSUM_01-C-POSSUM-IMMUNE-2KB Tr...    48   0.20   1
(CA834784) MCS030F05_159076 Ice plant Lambda Uni-Zap XR expr...    48   0.20   1
(BF480544) L0-2490T3 Ice plant Lambda Uni-Zap XR expression ...    48   0.20   1
(GD552088) 454PCS0179779 Scarlet Runner Bean globular-stage ...    48   0.20   1
(EY314350) CAWX25461.rev CAWX Helobdella robusta Primary Ear...    48   0.20   1
(EX423363) GQ03805.B7_B01 GQ038 - Stem - Active growth Picea...    48   0.20   1
(EX049628) BR034272 floral buds cDNA library KBFS Brassica r...    48   0.20   1
(EX039299) BR023943 floral bud cDNA library KBFL Brassica ra...    48   0.20   1
(DT146874) JGI_ANNO27520.fwd ANNO Pimephales promelas Whole ...    36   0.21   2
(DT161199) JGI_ANNO36699.fwd ANNO Pimephales promelas Whole ...    36   0.21   2
(DT160878) JGI_ANNO36508.fwd ANNO Pimephales promelas Whole ...    36   0.23   2
(DT354428) JGI_CABW499.fwd CABW Pimephales promelas ovary 7-...    36   0.24   2
(FG673845) G1143P322FE17.T0 Anolis carolinensis pooled norma...    42   0.25   2
(CW935311) EDCCT18TR A. castellanii, 6-8 kb library from tot...    44   0.31   2
(EU906957) Cynoglossus semilaevis microsatellite Cyse83 sequ...    42   0.38   2
(AC177681) Strongylocentrotus purpuratus clone R3-1014B2, WO...    36   0.45   2
(AC173739) Strongylocentrotus purpuratus clone R3-1004C8, WO...    36   0.45   2
(AC201027) Strongylocentrotus purpuratus clone R3-12I23, WOR...    44   0.46   2
(BQ487591) 46-E5515-006-001-O12-rev Sugar beet MPIZ-ADIS-006...    34   0.53   2
(BQ582737) E012281-024-007-J12-SP6 MPIZ-ADIS-024-inflorescen...    34   0.54   2
(AC177041) Strongylocentrotus purpuratus clone R3-38N14, WOR...    42   0.56   2
(CE281497) tigr-gss-dog-17000333760580 Dog Library Canis lup...    36   0.59   2
(EU550915) Arabidopsis thaliana isolate CS6182 TCP3 (TCP3) g...    36   0.59   2
(EU550902) Arabidopsis thaliana isolate CS6781 TCP3 (TCP3) g...    36   0.59   2
(EF148019) Populus trichocarpa clone WS0126_N04.                   34   0.60   2
(DT475340) WS0126.BR_N04 PT-GT-FL-A-3 Populus trichocarpa cD...    34   0.60   2
(DA522001) Homo sapiens cDNA clone FEBRA2012313, 5' end, mRN...    36   0.60   2
(AC168696) Strongylocentrotus purpuratus clone R3-3014G20, W...    40   0.73   2
(EY352026) CAWZ18430.rev CAWZ Helobdella robusta Primary Lat...    40   0.78   2
(FG345428) SF_06-b09 Bv_T50 Beta vulgaris subsp. vulgaris cD...    34   0.79   2
(AC118051) Mus musculus chromosome 1, clone RP24-430E15, com...    46   0.80   1
(AP010378) Lotus japonicus genomic DNA, chromosome 4, clone:...    46   0.80   1
(AP006710) Lotus japonicus genomic DNA, chromosome 1, clone:...    46   0.80   1
(AF361947) Dictyostelium discoideum SgcA (sgcA) mRNA, comple...    46   0.80   1
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701...    46   0.80   1
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117...    46   0.80   1
(AC104088) Homo sapiens BAC clone RP11-744C22 from 2, comple...    46   0.80   1
(AC095139) Rattus norvegicus clone CH230-7O10, *** SEQUENCIN...    46   0.80   1
(AP007423) Lotus japonicus genomic DNA, chromosome 4, clone:...    46   0.80   1
(AC181183) Strongylocentrotus purpuratus clone R3-14O6, WORK...    46   0.80   1
(AC180795) Strongylocentrotus purpuratus clone R3-3073H4, WO...    46   0.80   1
(AC180471) Strongylocentrotus purpuratus clone R3-3100C03, W...    46   0.80   1
(AC179968) Strongylocentrotus purpuratus clone R3-3035O08, W...    46   0.80   1
(AC179832) Strongylocentrotus purpuratus clone R3-1012E3, WO...    46   0.80   1
(AC177395) Strongylocentrotus purpuratus clone R3-53G21, WOR...    46   0.80   1
(AC177267) Strongylocentrotus purpuratus clone R3-43L8, WORK...    46   0.80   1
(BZ463527) BONOD17TF BO_1.6_2_KB_tot Brassica oleracea genom...    46   0.80   1
(CX929028) JGI_CAAN12371.fwd NIH_XGC_tropTe4 Xenopus (Silura...    46   0.80   1
(CX893085) JGI_CAAM5093.fwd NIH_XGC_tropTe3 Xenopus (Siluran...    46   0.80   1
(FG755744) G1146P313FA11.T0 Anolis carolinensis pooled norma...    46   0.80   1
(FG746488) G1146P35FI9.T0 Anolis carolinensis pooled normali...    46   0.80   1
(FG701296) G1144P337FL14.T0 Anolis carolinensis pooled norma...    46   0.80   1
(FG696289) G1144P326FI4.T0 Anolis carolinensis pooled normal...    46   0.80   1
(FG694125) G1144P326FC18.T0 Anolis carolinensis pooled norma...    46   0.80   1
(FG672017) G1143P310FB9.T0 Anolis carolinensis pooled normal...    46   0.80   1
(FF333835) 280455873 Pea aphid whole body normalized full le...    46   0.80   1
(FF332200) 280450785 Pea aphid whole body normalized full le...    46   0.80   1
(FF330513) 280443462 Pea aphid whole body normalized full le...    46   0.80   1
(FF329609) 280441140 Pea aphid whole body normalized full le...    46   0.80   1
(FF328493) 280437654 Pea aphid whole body normalized full le...    46   0.80   1
(FF328208) 280435916 Pea aphid whole body normalized full le...    46   0.80   1
(FF327856) 280434008 Pea aphid whole body normalized full le...    46   0.80   1
(FF320244) 280405814 Pea aphid whole body normalized full le...    46   0.80   1
(FF314774) 279397308 Pea aphid whole body normalized full le...    46   0.80   1
(FF314723) 279400876 Pea aphid whole body normalized full le...    46   0.80   1
(FF303886) 279357170 Pea aphid whole body normalized full le...    46   0.80   1
(FF301135) 279340220 Pea aphid whole body normalized full le...    46   0.80   1
(FE812950) CCAG30761.g1 CCAG Petrolisthes cinctipes heart, g...    46   0.80   1
(FE812949) CCAG30761.b1 CCAG Petrolisthes cinctipes heart, g...    46   0.80   1
(EY340698) CAWZ10762.fwd CAWZ Helobdella robusta Primary Lat...    46   0.80   1
(EX649583) 256733809 Pea aphid whole body normalized full le...    46   0.80   1
(EX642821) 256646807 Pea aphid whole body normalized full le...    46   0.80   1
(EX641488) 256637542 Pea aphid whole body normalized full le...    46   0.80   1
(EX641136) 256636063 Pea aphid whole body normalized full le...    46   0.80   1
(EX640618) 256633425 Pea aphid whole body normalized full le...    46   0.80   1
(EX639654) 256631206 Pea aphid whole body normalized full le...    46   0.80   1
(EX638866) 256623775 Pea aphid whole body normalized full le...    46   0.80   1
(EX637854) 256618381 Pea aphid whole body normalized full le...    46   0.80   1
(EX636739) 256610606 Pea aphid whole body normalized full le...    46   0.80   1
(EX636456) 256608837 Pea aphid whole body normalized full le...    46   0.80   1
(EX630068) 255462775 Pea aphid whole body normalized full le...    46   0.80   1
(EX629888) 255463989 Pea aphid whole body normalized full le...    46   0.80   1
(EX622948) 255423899 Pea aphid whole body normalized full le...    46   0.80   1
(EX619752) 255408553 Pea aphid whole body normalized full le...    46   0.80   1
(EX617953) 255401329 Pea aphid whole body normalized full le...    46   0.80   1
(EX615916) 255394597 Pea aphid whole body normalized full le...    46   0.80   1
(EX615794) 255391171 Pea aphid whole body normalized full le...    46   0.80   1
(EX611390) 255375195 Pea aphid whole body normalized full le...    46   0.80   1
(EX604319) 255344307 Pea aphid whole body normalized full le...    46   0.80   1
(EX602494) 255333271 Pea aphid whole body normalized full le...    46   0.80   1
(DA834088) Homo sapiens cDNA clone PLACE3000104, 5' end, mRN...    36   0.82   2
(AC176281) Strongylocentrotus purpuratus clone R3-3005L3, WO...    42   1.5    2
(AC079176) Homo sapiens X BAC RP11-325D5 (Roswell Park Cance...    34   1.6    2
(AC168554) Strongylocentrotus purpuratus clone R3-3091G16, W...    34   1.6    2
(L34674) Dictyostelium discoideum glycogen synthase kinase 3...    42   1.9    2
(DY954774) CHPZ2296.b1_P22.ab1 CHP(XYZ) plains sunflower Hel...    40   1.9    2
(DY954919) CHPZ2444.b1_H11.ab1 CHP(XYZ) plains sunflower Hel...    40   2.1    2
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074...    42   2.3    4
(AC171262) Pan troglodytes chromosome X clone RP43-43O10 map...    38   2.3    2
(EB234789) PEG003-C-209241-501 Normalized Pedal-Pleural Gang...    40   2.5    2
(EY487035) CBBP15558.fwd CBBP Hirudo medicinalis hermaphrodi...    34   2.6    2
(AG185830) Pan troglodytes DNA, clone: RP43-060A15.T7.             36   2.7    2
(AC108616) Rattus norvegicus clone CH230-294N12, WORKING DRA...    44   2.7    2
(AC108578) Rattus norvegicus clone CH230-223D6, *** SEQUENCI...    44   3.0    2
(CU076078) Zebrafish DNA sequence from clone CH73-309L7 in l...    44   3.2    1
(J03654) Human immunodeficiency virus type 2, isolate HIV2FG.      44   3.2    1
(AC152167) Mus musculus BAC clone RP23-330B16 from 7, comple...    44   3.2    1
(AC135081) Mus musculus BAC clone RP24-131A24 from chromosom...    44   3.2    1
(AC190424) Pan troglodytes BAC clone CH251-258A7 from chromo...    44   3.2    1
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ...    44   3.2    1
(DQ446952) Arabidopsis thaliana clone pENTR221-At5g15140 ald...    44   3.2    1
(CU633454) Podospora anserina genomic DNA chromosome 4, supe...    44   3.2    1
(AM430542) Vitis vinifera contig VV78X116814.10, whole genom...    44   3.2    1
(AL353993) Arabidopsis thaliana DNA chromosome 5, BAC clone ...    44   3.2    1
(AK118690) Arabidopsis thaliana At5g15140 mRNA for putative ...    44   3.2    1
(AC189448) Brassica rapa subsp. pekinensis clone KBrB071K22,...    44   3.2    1
(AR152157) Sequence 15 from patent US 6232455.                     44   3.2    1
(AR078487) Sequence 15 from patent US 5962665.                     44   3.2    1
(U51923) Dictyostelium discoideum STE20-telated kinase DPAK1...    44   3.2    1
(AY190950) Drosophila willistoni clone DWIF01_1_E5 (D1417) g...    44   3.2    1
(AL929359) Plasmodium falciparum strain 3D7, chromosome 9; s...    44   3.2    1
(AF430399) Penaeus esculentus microsatellite CSGES269 sequence.    44   3.2    1
(AF131221) Dictyostelium discoideum p21-activated protein ki...    44   3.2    1
(AC171131) Helobdella robusta clone CH306-1A2, complete sequ...    44   3.2    1
(AC171127) Helobdella robusta clone CH306-1A1, complete sequ...    44   3.2    1
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    44   3.2    1
(AC024761) Caenorhabditis elegans cosmid Y38C1AA, complete s...    44   3.2    1
(AL021326) Human DNA sequence from clone RP1-124C6 on chromo...    44   3.2    1
(AC106745) Homo sapiens chromosome 16 clone RP11-134D3, comp...    44   3.2    1
(AC093519) Homo sapiens chromosome 16 clone RP11-107C10, com...    44   3.2    1
(AC079456) Homo sapiens 12 BAC RP11-206B11 (Roswell Park Can...    44   3.2    1
(AC150423) Branchiostoma floridae clone CH302-79L22, WORKING...    44   3.2    1
(AC149941) Strongylocentrotus purpuratus clone R3-17I13, WOR...    44   3.2    1
(AC149940) Strongylocentrotus purpuratus clone R3-15I1, WORK...    44   3.2    1
(AC149938) Strongylocentrotus purpuratus clone R3-15A13, WOR...    44   3.2    1
(AC134658) Rattus norvegicus clone CH230-30P17, WORKING DRAF...    44   3.2    1
(AC131502) Lytechinus variegatus clone Lv60B16, *** SEQUENCI...    44   3.2    1
(AC109973) Rattus norvegicus clone CH230-66J18, *** SEQUENCI...    44   3.2    1
(AC098979) Rattus norvegicus clone CH230-182F15, WORKING DRA...    44   3.2    1
(FP102842) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   3.2    1
(AC068929) Homo sapiens chromosome 1 clone RP11-206C14 map 1...    44   3.2    1
(AC234749) Brassica rapa subsp. pekinensis chromosome Linkag...    44   3.2    1
(AC232523) Brassica rapa subsp. pekinensis clone KBrB077C20,...    44   3.2    1
(AC217144) Solanum lycopersicum chromosome 9 clone C09SLm000...    44   3.2    1
(AC208328) Zea mays chromosome 2 clone CH201-121N9; ZMMBBc01...    44   3.2    1
(AC201668) Strongylocentrotus purpuratus clone R3-22N11, WOR...    44   3.2    1
(AC201663) Strongylocentrotus purpuratus clone R3-3081B8, WO...    44   3.2    1
(AC201182) Strongylocentrotus purpuratus clone R3-14O1, WORK...    44   3.2    1
(AC201016) Strongylocentrotus purpuratus clone R3-12H10, WOR...    44   3.2    1
(AC198780) Zea mays chromosome 7 clone CH201-61K12; ZMMBBc00...    44   3.2    1
(AC190049) Brassica rapa subsp. pekinensis clone KBrB010B23,...    44   3.2    1
(AC186515) Zea mays chromosome 8 clone CH201-268M1; ZMMBBc02...    44   3.2    1
(AC184882) Strongylocentrotus purpuratus clone R3-1015A21, W...    44   3.2    1
(AC184679) Strongylocentrotus purpuratus clone R3-1037F15, W...    44   3.2    1
(AC184322) Strongylocentrotus purpuratus clone R3-1116G16, W...    44   3.2    1
(AC184280) Strongylocentrotus purpuratus clone R3-32K14, WOR...    44   3.2    1
(AC181782) Strongylocentrotus purpuratus clone R3-1032E03, W...    44   3.2    1
(AC181595) Strongylocentrotus purpuratus clone R3-1109B3, WO...    44   3.2    1
(AC181187) Strongylocentrotus purpuratus clone R3-3040G7, WO...    44   3.2    1
(AC181029) Strongylocentrotus purpuratus clone R3-3050O24, W...    44   3.2    1
(AC180589) Strongylocentrotus purpuratus clone R3-3094J22, W...    44   3.2    1
(AC180394) Strongylocentrotus purpuratus clone R3-3106M4, WO...    44   3.2    1
(AC180273) Strongylocentrotus purpuratus clone R3-3123N06, W...    44   3.2    1
(AC180271) Strongylocentrotus purpuratus clone R3-3123M09, W...    44   3.2    1
(AC180180) Strongylocentrotus purpuratus clone R3-4001I9, WO...    44   3.2    1
(AC180070) Strongylocentrotus purpuratus clone R3-3029O13, W...    44   3.2    1
(AC179962) Strongylocentrotus purpuratus clone R3-3034P20, W...    44   3.2    1
(AC179857) Strongylocentrotus purpuratus clone R3-1007G7, WO...    44   3.2    1
(AC179790) Strongylocentrotus purpuratus clone R3-1015B13, W...    44   3.2    1
(AC179678) Strongylocentrotus purpuratus clone R3-60A5, WORK...    44   3.2    1
(AC179239) Strongylocentrotus purpuratus clone R3-1106L20, W...    44   3.2    1
(AC179076) Strongylocentrotus purpuratus clone R3-4009G6, WO...    44   3.2    1
(AC179049) Strongylocentrotus purpuratus clone R3-1108C21, W...    44   3.2    1
(AC179012) Strongylocentrotus purpuratus clone R3-1108J03, W...    44   3.2    1
(AC178846) Strongylocentrotus purpuratus clone R3-26F6, WORK...    44   3.2    1
(AC178830) Strongylocentrotus purpuratus clone R3-29F11, WOR...    44   3.2    1
(AC178828) Strongylocentrotus purpuratus clone R3-25J14, WOR...    44   3.2    1
(AC178805) Strongylocentrotus purpuratus clone R3-22G01, WOR...    44   3.2    1
(AC178734) Strongylocentrotus purpuratus clone R3-3002L9, WO...    44   3.2    1
(AC178675) Strongylocentrotus purpuratus clone R3-12B2, WORK...    44   3.2    1
(AC178207) Strongylocentrotus purpuratus clone R3-3085F05, W...    44   3.2    1
(AC178100) Strongylocentrotus purpuratus clone R3-3068H2, WO...    44   3.2    1
(AC178060) Strongylocentrotus purpuratus clone R3-3056K24, W...    44   3.2    1
(AC177817) Zea mays chromosome 1 clone CH201-226G16; ZMMBBc0...    44   3.2    1
(AC177492) Strongylocentrotus purpuratus clone R3-61N21, WOR...    44   3.2    1
(AC177183) Strongylocentrotus purpuratus clone R3-4018G10, W...    44   3.2    1
(AC176850) Strongylocentrotus purpuratus clone R3-3120I9, WO...    44   3.2    1
(AC176652) Strongylocentrotus purpuratus clone R3-3080O09, W...    44   3.2    1
(AC176643) Strongylocentrotus purpuratus clone R3-3080M10, W...    44   3.2    1
(AC176608) Strongylocentrotus purpuratus clone R3-3079G22, W...    44   3.2    1
(AC176590) Strongylocentrotus purpuratus clone R3-3077L03, W...    44   3.2    1
(AC176576) Strongylocentrotus purpuratus clone R3-3077E11, W...    44   3.2    1
(AC176567) Strongylocentrotus purpuratus clone R3-3076M20, W...    44   3.2    1
(AC176416) Strongylocentrotus purpuratus clone R3-12I3, WORK...    44   3.2    1
(AC176159) Strongylocentrotus purpuratus clone R3-3019G08, W...    44   3.2    1
(AC176124) Strongylocentrotus purpuratus clone R3-24N17, WOR...    44   3.2    1
(AC176058) Strongylocentrotus purpuratus clone R3-19A12, WOR...    44   3.2    1
(AC175843) Strongylocentrotus purpuratus clone R3-15M1, WORK...    44   3.2    1
(AC172391) Strongylocentrotus purpuratus clone R3-14O19, WOR...    44   3.2    1
(AC172309) Strongylocentrotus purpuratus clone R3-14K19, WOR...    44   3.2    1
(AC006741) Caenorhabditis elegans clone Y38C1, *** SEQUENCIN...    44   3.2    1
(FH673505) CHO_OF5042xm09f1.ab1 CHO_OF5 Nicotiana tabacum ge...    44   3.2    1
(FH187914) CHO_OF3437xc01f1.ab1 CHO_OF3 Nicotiana tabacum ge...    44   3.2    1
(AM672301) Entamoeba terrapinae GSS, clone terra234f02.p1k.        44   3.2    1
(EI192209) ZMMBBb0095F04.fv ZMMBB_VAL Zea mays genomic clone...    44   3.2    1
(ED983185) hfqb0095F04.fq.scf ZMMBB_VAL Zea mays genomic clo...    44   3.2    1
(ED755069) GM_WBb0123D17.f GM_WBb Glycine max genomic clone ...    44   3.2    1
(ED481198) ZMMBBb0095F04.fq ZMMBB_VAL Zea mays genomic clone...    44   3.2    1
(DX459320) Cpl00974 Papaya Genomic DNA BAC Library Carica pa...    44   3.2    1
(DX094171) AU_BAC003A2C05_T7 CHORI212 Ictalurus punctatus ge...    44   3.2    1
(DH176435) Oryzias latipes Fosmid clone:GOLWFno454_g08, forw...    44   3.2    1
(DE137682) Oryzias latipes DNA, reverse end of BAC clone: Mn...    44   3.2    1
(CL535793) trib014xm20.g1 T. reesei HindIII BAC library Hypo...    44   3.2    1
(CL532994) trib008xe17.b3 T. reesei HindIII BAC library Hypo...    44   3.2    1
(CL306648) ZMMBBb0095F04f ZMMBBb (HindIII) Zea mays subsp. m...    44   3.2    1
(CG789445) ZMMBBb0263H14.f ZMMBBb Zea mays subsp. mays genom...    44   3.2    1
(CC758609) ZMMBBb0145N19.r ZMMBBb Zea mays subsp. mays genom...    44   3.2    1
(EL492366) CHUS764.b1_H24.ab1 CHU(LMS) puzzle sunflower Heli...    44   3.2    1
(EL490584) CHUS5654.b1_K22.ab1 CHU(LMS) puzzle sunflower Hel...    44   3.2    1
(EL479800) CHUM1778.b1_C14.ab1 CHU(LMS) puzzle sunflower Hel...    44   3.2    1
(EH745272) CNMS487.b2_N01.ab1 CNM(LMS) spotted knapweed Cent...    44   3.2    1
(EH742814) CNMS2496.b1_P23.ab1 CNM(LMS) spotted knapweed Cen...    44   3.2    1
(EH740874) CNMS14111.b1_M24.ab1 CNM(LMS) spotted knapweed Ce...    44   3.2    1
(EH728498) CNMM14956.b1_H20.ab1 CNM(LMS) spotted knapweed Ce...    44   3.2    1
(EH720456) CNML6880.b1_P16.ab1 CNM(LMS) spotted knapweed Cen...    44   3.2    1
(EH716387) CNML2719.b1_M07.ab1 CNM(LMS) spotted knapweed Cen...    44   3.2    1
(EH713663) CNML13189.b1_J09.ab1 CNM(LMS) spotted knapweed Ce...    44   3.2    1
(EH630620) EST1727 LK04 Laupala kohalensis cDNA clone 106102...    44   3.2    1
(EG602689) EMBRYOF101124D22 POSSUM_01-POSSUM-C-EMBRYO-2KB Tr...    44   3.2    1
(EG535723) RrLXMa50j15f1 CSM Rutilus rutilus cDNA clone 50j1...    44   3.2    1
(EG414158) SAAH-aab18f06.b1 Agen 0058 Schmidtea mediterranea...    44   3.2    1
(EG021300) BMSA01-T7-03-A11 Brassica napus Full-length cDNA ...    44   3.2    1
(EE482980) BNYS8DCT_UP_033_C06_21APR2005_044 Brassica napus ...    44   3.2    1
(EE482090) BNYS8DCT_UP_021_B07_20APR2005_061 Brassica napus ...    44   3.2    1
(EE477563) BNYS4DCT_UP_023_G05_21MAR2005_035 Brassica napus ...    44   3.2    1
(EE464569) BNSCS2CT_UP_029_G10_07JAN2005_068 Brassica napus ...    44   3.2    1
(EE463312) BNSCS2CT_UP_008_F01_05JAN2005_005 Brassica napus ...    44   3.2    1
(EE455187) BNBS4DCT_UP_024_B03_26MAR2005_029 Brassica napus ...    44   3.2    1
(DY943320) CHPY11196.b1_G15.ab1 CHP(XYZ) plains sunflower He...    44   3.2    1
(DY914800) CHAY10304.b1_P08.ab1 CHA(XYZ) common wild sunflow...    44   3.2    1
(DY893266) CeleSEQ12556 Cunninghamella elegans pBluescript (...    44   3.2    1
(DY887810) CeleSEQ4518 Cunninghamella elegans pBluescript (E...    44   3.2    1
(DY887779) CeleSEQ4453 Cunninghamella elegans pBluescript (E...    44   3.2    1
(DW494576) GH_RMIRS_103_A11_R Cotton Normalized Library rand...    44   3.2    1
(DW170162) CLVY8471.b1_M05.ab1 CLV(XYZ) lettuce virosa Lactu...    44   3.2    1
(DT287653) JGI_CAAW732.fwd CAAW Pimephales promelas testis 7...    44   3.2    1
(DT269049) JGI_CAAV2701.fwd CAAV Pimephales promelas testis ...    44   3.2    1
(DT263509) JGI_CAAU12608.fwd CAAU Pimephales promelas brain ...    44   3.2    1
(DT242486) JGI_CAAT12535.fwd CAAT Pimephales promelas brain ...    44   3.2    1
(DT241175) JGI_CAAT11829.fwd CAAT Pimephales promelas brain ...    44   3.2    1
(DT232860) JGI_CAAT7312.fwd CAAT Pimephales promelas brain 7...    44   3.2    1
(DT230745) JGI_CAAT5012.fwd CAAT Pimephales promelas brain 7...    44   3.2    1
(DT226168) JGI_CAAT2506.fwd CAAT Pimephales promelas brain 7...    44   3.2    1
(DT225356) JGI_CAAT2063.fwd CAAT Pimephales promelas brain 7...    44   3.2    1
(DT210364) JGI_CAAS16465.fwd CAAS Pimephales promelas brain ...    44   3.2    1
(AU298719) Cryptomeria japonica mRNA, clone: CM0007, 3' end,...    44   3.2    1
(DR224778) 75656 CERES-148 Arabidopsis thaliana cDNA clone 4...    44   3.2    1
(DR224777) 1141440 CERES-148 Arabidopsis thaliana cDNA clone...    44   3.2    1
(DR169497) RTPHOS1_32_H09.g1_A029 Roots minus phosphorous Pi...    44   3.2    1
(AU071585) Dictyostelium discoideum slug cDNA, clone SSB837.       44   3.2    1
(AM809261) Nicotiana tabacum EST, clone nt006147071.               44   3.2    1
(AM792587) Nicotiana tabacum EST, clone nt002230017.               44   3.2    1
(AM532955) Paracentrotus lividus EST, clone MPMGp1171C10107Q...    44   3.2    1
(AM528380) Paracentrotus lividus EST, clone MPMGp1171B11203Q...    44   3.2    1
(D73785) Caenorhabditis elegans cDNA clone yk63b10 : 5' end,...    44   3.2    1
(CV124448) OSTR30029H11 pDONR201 Entry vector Caenorhabditis...    44   3.2    1
(CV124447) OSTF30029H11 pDONR201 Entry vector Caenorhabditis...    44   3.2    1
(CN762887) ID0AAA5BH11RM1 ApMS Acyrthosiphon pisum cDNA clon...    44   3.2    1
(CN757929) ID0AAA20DD11RM1 ApMS Acyrthosiphon pisum cDNA clo...    44   3.2    1
(CN755336) ID0AAA15CC06RM1 ApMS Acyrthosiphon pisum cDNA clo...    44   3.2    1
(CN753876) ID0AAA11BF09RM1 ApMS Acyrthosiphon pisum cDNA clo...    44   3.2    1
(CN750768) ApDT-XXVI-A3 ApDT Acyrthosiphon pisum cDNA clone ...    44   3.2    1
(CN584280) USDA-FP_127348 Acyrthosiphon pisum, Pea Aphid Acy...    44   3.2    1
(CK358721) AGENCOURT_17158508 NIH_MGC_233 Rattus norvegicus ...    44   3.2    1
(CF450841) EST687186 normalized cDNA library of onion Allium...    44   3.2    1
(CF450840) EST687185 normalized cDNA library of onion Allium...    44   3.2    1
(CF449734) EST686079 normalized cDNA library of onion Allium...    44   3.2    1
(CD817776) BN20.043C06F011127 BN20 Brassica napus cDNA clone...    44   3.2    1
(CD816123) BN15.028J24F020327 BN15 Brassica napus cDNA clone...    44   3.2    1
(CD813734) BN15.020N03F020211 BN15 Brassica napus cDNA clone...    44   3.2    1
(CD195246) MS1-0088T-L353-A08-2.B MS1-0088 Schistosoma manso...    44   3.2    1
(BU034265) QHJ3J09.yg.ab1 QH_EFGHJ sunflower RHA280 Helianth...    44   3.2    1
(BP663475) Arabidopsis thaliana cDNA clone:RAFL21-48-D16, 3'...    44   3.2    1
(BJ811236) Caenorhabditis elegans cDNA clone:yk1453g09 : 3' ...    44   3.2    1
(BJ793804) Caenorhabditis elegans cDNA clone:yk1692f07 : 3' ...    44   3.2    1
(BJ443659) Dictyostelium discoideum cDNA clone:ddv53m17, 3' ...    44   3.2    1
(BJ363000) Dictyostelium discoideum cDNA clone:ddc24c17, 5' ...    44   3.2    1
(BJ324679) Dictyostelium discoideum cDNA clone:dda7p08, 5' e...    44   3.2    1
(BJ139908) Caenorhabditis elegans cDNA clone:yk1152a12 : 3' ...    44   3.2    1
(BJ131758) Caenorhabditis elegans cDNA clone:yk1058d04 : 3' ...    44   3.2    1
(BG125577) EST471223 tomato shoot/meristem Solanum lycopersi...    44   3.2    1
(GE750054) MUS17-D16.y1d-s SHGC-MUS Mytilus californianus cD...    44   3.2    1
(GE748354) MUS22-D16.y1d-s SHGC-MUS Mytilus californianus cD...    44   3.2    1
(GE568526) CCHT3085.b1_I03.ab1 CCHT Niger Seed Guizotia abys...    44   3.2    1
(GE520280) CCFU387.b7_E01.ab1 CCF(STU) sunflower Helianthus ...    44   3.2    1
(FK196194) XABT208520.g1 Gateway compatible cien cDNA librar...    44   3.2    1
(FK196040) XABT208424.g1 Gateway compatible cien cDNA librar...    44   3.2    1
(FK127526) XABT166375.g1 Gateway compatible cien cDNA librar...    44   3.2    1
(FG786093) G1148P36FL13.T0 Anolis carolinensis pooled normal...    44   3.2    1
(FG750056) G1146P330FG7.T0 Anolis carolinensis pooled normal...    44   3.2    1
(FG311524) NB.39.9a NB Schmidtea mediterranea cDNA clone NB....    44   3.2    1
(FF737731) XABT50517.rev Gateway compatible cien cDNA librar...    44   3.2    1
(FF338510) 280471332 Pea aphid whole body normalized full le...    44   3.2    1
(FF327386) 280433008 Pea aphid whole body normalized full le...    44   3.2    1
(FF325230) 280424381 Pea aphid whole body normalized full le...    44   3.2    1
(FF321409) 280412283 Pea aphid whole body normalized full le...    44   3.2    1
(FF321183) 280410217 Pea aphid whole body normalized full le...    44   3.2    1
(FF320301) 280406234 Pea aphid whole body normalized full le...    44   3.2    1
(FF319793) 280405096 Pea aphid whole body normalized full le...    44   3.2    1
(FF318957) 280399705 Pea aphid whole body normalized full le...    44   3.2    1
(FF312623) 279385481 Pea aphid whole body normalized full le...    44   3.2    1
(FF311968) 279383330 Pea aphid whole body normalized full le...    44   3.2    1
(FF309724) 279376917 Pea aphid whole body normalized full le...    44   3.2    1
(FF309417) 279374263 Pea aphid whole body normalized full le...    44   3.2    1
(FF308175) 279370870 Pea aphid whole body normalized full le...    44   3.2    1
(FF307141) 279367592 Pea aphid whole body normalized full le...    44   3.2    1
(FF302585) 279351253 Pea aphid whole body normalized full le...    44   3.2    1
(FF294319) 279300275 Pea aphid whole body normalized full le...    44   3.2    1
(FF293061) 279293636 Pea aphid whole body normalized full le...    44   3.2    1
(FE591541) CAXG5734.fwd Amphioxus Branchiostoma floridae unp...    44   3.2    1
(FE576859) CAXG10181.fwd Amphioxus Branchiostoma floridae un...    44   3.2    1
(FE113234) LV_HC_RA058J07f Litopenaeus vannamei hemocyte cDN...    44   3.2    1
(FE113233) LV_HC_RA058H07r Litopenaeus vannamei hemocyte cDN...    44   3.2    1
(FE113232) LV_HC_RA058H07f Litopenaeus vannamei hemocyte cDN...    44   3.2    1
(FE113231) LV_HC_RA058F07r Litopenaeus vannamei hemocyte cDN...    44   3.2    1
(FE097019) LV_GL_RA53B11f Litopenaeus vannamei gills cDNA li...    44   3.2    1
(FE095812) LV_GL_RA50D12f Litopenaeus vannamei gills cDNA li...    44   3.2    1
(FE091721) LV_GL_RA43K11f Litopenaeus vannamei gills cDNA li...    44   3.2    1
(FD981310) RR3GZ25TF RR3(NY) Raphanus raphanistrum subsp. ra...    44   3.2    1
(FD977086) RR3GZ25JQ RR3(NY) Raphanus raphanistrum subsp. ra...    44   3.2    1
(FD948969) RS2H489TF RS2(RS) Raphanus sativus cDNA 5', mRNA ...    44   3.2    1
(FD556429) RR4EL17TF RR4(PB) Raphanus raphanistrum subsp. la...    44   3.2    1
(FD548150) RR3EG03TF RR3(NY) Raphanus raphanistrum subsp. ra...    44   3.2    1
(FD237346) CBZF26048.g1 CBZF: Normalized blue catfish cDNA l...    44   3.2    1
(FD237345) CBZF26048.b1 CBZF: Normalized blue catfish cDNA l...    44   3.2    1
(FD208318) CBZA8688.g1 CBZA: Normalized channel catfish cDNA...    44   3.2    1
(FD208268) CBZA8653.g1 CBZA: Normalized channel catfish cDNA...    44   3.2    1
(FD208267) CBZA8653.b1 CBZA: Normalized channel catfish cDNA...    44   3.2    1
(FD203210) CBZA5682.b1 CBZA: Normalized channel catfish cDNA...    44   3.2    1
(FD202203) CBZA5118.g1 CBZA: Normalized channel catfish cDNA...    44   3.2    1
(FD202202) CBZA5118.b1 CBZA: Normalized channel catfish cDNA...    44   3.2    1
(FD198699) CBZA3053.g1 CBZA: Normalized channel catfish cDNA...    44   3.2    1
(FD187370) CBZA19828.g1 CBZA: Normalized channel catfish cDN...    44   3.2    1
(FD187369) CBZA19828.b1 CBZA: Normalized channel catfish cDN...    44   3.2    1
(FD182002) CBZA16720.g1 CBZA: Normalized channel catfish cDN...    44   3.2    1
(FD182001) CBZA16720.b1 CBZA: Normalized channel catfish cDN...    44   3.2    1
(FD181724) CBZA16565.g1 CBZA: Normalized channel catfish cDN...    44   3.2    1
(FD181723) CBZA16565.b1 CBZA: Normalized channel catfish cDN...    44   3.2    1
(FD172399) CBZA1118.g1 CBZA: Normalized channel catfish cDNA...    44   3.2    1
(FD172398) CBZA1118.b1 CBZA: Normalized channel catfish cDNA...    44   3.2    1
(FD110439) CBZB13941.g1 CBZB: Normalized channel catfish cDN...    44   3.2    1
(FD110438) CBZB13941.b1 CBZB: Normalized channel catfish cDN...    44   3.2    1
(FD106318) CBZB11384.g1 CBZB: Normalized channel catfish cDN...    44   3.2    1
(FD106190) CBZB11249.g1 CBZB: Normalized channel catfish cDN...    44   3.2    1
(FD104864) CBZB10393.g1 CBZB: Normalized channel catfish cDN...    44   3.2    1
(FD022791) CBNI8750.g1 CBNI: Normalized channel catfish cDNA...    44   3.2    1
(FD022790) CBNI8750.b1 CBNI: Normalized channel catfish cDNA...    44   3.2    1
(FD021877) CBNI7852.g1 CBNI: Normalized channel catfish cDNA...    44   3.2    1
(FD021876) CBNI7852.b1 CBNI: Normalized channel catfish cDNA...    44   3.2    1
(FD017437) CBNI4837.b1 CBNI: Normalized channel catfish cDNA...    44   3.2    1
(FD013962) CBNI20748.g1 CBNI: Normalized channel catfish cDN...    44   3.2    1
(FD012297) CBNI14517.g1 CBNI: Normalized channel catfish cDN...    44   3.2    1
(FD012296) CBNI14517.b1 CBNI: Normalized channel catfish cDN...    44   3.2    1
(FC851839) CBHN7045.rev CBHN Metridium senile tentacle Metri...    44   3.2    1
(EY924895) RR4E774TF RR4(PB) Raphanus raphanistrum subsp. la...    44   3.2    1
(EY924005) RR4DX41TF RR4(PB) Raphanus raphanistrum subsp. la...    44   3.2    1
(EY916734) RR3E963TF RR3(NY) Raphanus raphanistrum subsp. ra...    44   3.2    1
(EY913010) RR3D205TF RR3(NY) Raphanus raphanistrum subsp. ra...    44   3.2    1
(EY908188) RR2E432TF RR2(MS) Raphanus raphanistrum subsp. ra...    44   3.2    1
(EY900338) RR1E485TF RR1(CS) Raphanus raphanistrum subsp. ma...    44   3.2    1
(EY895905) RR1E485JQ RR1(CS) Raphanus raphanistrum subsp. ma...    44   3.2    1
(EY895474) RR1DY59JQ RR1(CS) Raphanus raphanistrum subsp. ma...    44   3.2    1
(EY485431) CBBP14590.rev CBBP Hirudo medicinalis hermaphrodi...    44   3.2    1
(EY482420) CBBP12345.rev CBBP Hirudo medicinalis hermaphrodi...    44   3.2    1
(EY359378) CAWZ6402.fwd CAWZ Helobdella robusta Primary Late...    44   3.2    1
(EY343266) CAWZ12397.rev CAWZ Helobdella robusta Primary Lat...    44   3.2    1
(EX648775) 256725164 Pea aphid whole body normalized full le...    44   3.2    1
(EX647673) 256719251 Pea aphid whole body normalized full le...    44   3.2    1
(EX638644) 256623258 Pea aphid whole body normalized full le...    44   3.2    1
(EX630827) 255495042 Pea aphid whole body normalized full le...    44   3.2    1
(EX626130) 255437991 Pea aphid whole body normalized full le...    44   3.2    1
(EX625754) 255432426 Pea aphid whole body normalized full le...    44   3.2    1
(EX620254) 255412943 Pea aphid whole body normalized full le...    44   3.2    1
(EX612882) 255381902 Pea aphid whole body normalized full le...    44   3.2    1
(EX133077) BR116907 root cDNA library KHRT Brassica rapa sub...    44   3.2    1
(EX116210) BR070909 pistil cDNA library KCOW Brassica rapa s...    44   3.2    1
(EX115788) BR070487 pistil cDNA library KCOV Brassica rapa s...    44   3.2    1
(EV530445) RR1AG07JQ RR1(CS) Raphanus raphanistrum subsp. ma...    44   3.2    1
(EV525799) RR1AG07TF RR1(CS) Raphanus raphanistrum subsp. ma...    44   3.2    1
(EV086904) BNSCS5CT_UP_127_F08_29MAY2007_054 Brassica napus ...    44   3.2    1
(EV086422) BNSCS5CT_UP_122_A11_30MAY2007_095 Brassica napus ...    44   3.2    1
(EV074369) BNSCS4CT_UP_208_B04_23MAY2007_030 Brassica napus ...    44   3.2    1
(EV060579) BNSCS3CT_UP_298_F12_01JUN2007_086 Brassica napus ...    44   3.2    1
(EV044633) BNSCS3CT_UP_102_E12_05MAY2007_088 Brassica napus ...    44   3.2    1
(EV041071) BNSCS3CT_UP_057_E08_05MAY2007_056 Brassica napus ...    44   3.2    1
(ES752692) C20L_16_D10_E002.g1 USDA-Tifton Peanut Library C2...    44   3.2    1
(AA420920) CpEST.361 uniZAPCpIOWAsporoLib3 Cryptosporidium p...    44   3.2    1
(CZ870078) OC__Ba0267P24.f OC__Ba Oryza coarctata genomic cl...    38   3.3    2
(AC092268) Homo sapiens chromosome X clone RP11-185O17 map p...    38   3.4    3
(DR746843) F10_AECAL_P19_F10 Aedes aegypti adult female corp...    40   3.8    2
(AC117267) Dictyostelium discoideum chromosome 2 map 5836255...    40   5.4    2
(AC181958) Strongylocentrotus purpuratus clone R3-1003P19, W...    34   5.6    4
(AC107388) Homo sapiens chromosome 4 clone RP11-507D22, WORK...    32   5.8    2
(AC005690) Homo sapiens chromosome 4 clone C0483I23, complet...    32   5.9    2
(AC106894) Homo sapiens BAC clone RP11-141E13 from 4, comple...    32   5.9    2
(AC176268) Strongylocentrotus purpuratus clone R3-3057O9, WO...    32   5.9    2
(AC181700) Strongylocentrotus purpuratus clone R3-3102I11, W...    32   5.9    2
(AC180505) Strongylocentrotus purpuratus clone R3-3099M09, W...    32   6.0    2
(AC176478) Strongylocentrotus purpuratus clone R3-3070K21, W...    32   6.0    2
(AC023057) Homo sapiens chromosome 3 clone RP11-57L14, WORKI...    32   6.0    2
(AC152405) Medicago truncatula chromosome 8 clone mth2-49f2,...    42   6.0    2
(AC129455) Rattus norvegicus clone CH230-9C2, *** SEQUENCING...    38   6.5    3
(AC181502) Strongylocentrotus purpuratus clone R3-1111D7, WO...    42   6.8    2
(AC179134) Strongylocentrotus purpuratus clone R3-4011N3, WO...    42   7.3    2
(CF660954) CcLL10a33e13f1 Carp liver library 5 Cyprinus carp...    36   7.4    2
(AM796920) Nicotiana tabacum EST, clone nt005218020.               32   7.4    2
(ES810821) UFL_229_65 Cotton fiber 0-10 day post anthesis Go...    32   7.7    2
(FI147277) CTDZ06109 Setaria Italica Microsatellite enriched...    30   7.9    2
(AZ530095) ENTBY31TR Entamoeba histolytica Sheared DNA Entam...    32   7.9    2
(FD710337) CAAA15920.fwd CAAA Petromyzon marinus Petromyzon ...    30   7.9    2
(AC168446) Strongylocentrotus purpuratus clone R3-39C13, WOR...    40   7.9    2
(EY501525) CBBP587.rev CBBP Hirudo medicinalis hermaphrodite...    30   7.9    2
(EY504187) CBBP7356.rev CBBP Hirudo medicinalis hermaphrodit...    30   8.0    2
(CN740275) SM_TP0661 Suidasia medanensis cDNA library Suidas...    32   8.0    2
(EY495283) CBBP2206.rev CBBP Hirudo medicinalis hermaphrodit...    30   8.0    2
(DV126409) CV03045A1F01.f1 CV03-normalized library Euphorbia...    30   8.1    2
(CQ331864) Sequence 5958 from Patent WO0157275.                    32   8.1    2
(CQ295250) Sequence 6355 from Patent WO0186003.                    32   8.1    2
(CQ257939) Sequence 6200 from Patent WO0157277.                    32   8.1    2
(CQ219445) Sequence 6284 from Patent WO0157273.                    32   8.1    2
(CQ174294) Sequence 5690 from Patent WO0157274.                    32   8.1    2
(CQ136145) Sequence 6167 from Patent WO0157276.                    32   8.1    2
(CQ097315) Sequence 6174 from Patent WO0157272.                    32   8.1    2
(CQ069888) Sequence 5688 from Patent WO0157278.                    32   8.1    2
(AC178462) Strongylocentrotus purpuratus clone R3-3039P05, W...    42   8.3    3
(CQ344646) Sequence 18740 from Patent WO0157275.                   32   8.4    2
(CQ307808) Sequence 18913 from Patent WO0186003.                   32   8.4    2
(CQ270549) Sequence 18810 from Patent WO0157277.                   32   8.4    2
(CQ232496) Sequence 19335 from Patent WO0157273.                   32   8.4    2
(CQ184203) Sequence 15599 from Patent WO0157274.                   32   8.4    2
(CQ149220) Sequence 19242 from Patent WO0157276.                   32   8.4    2
(CQ110491) Sequence 19350 from Patent WO0157272.                   32   8.4    2
(CQ079108) Sequence 14908 from Patent WO0157278.                   32   8.4    2
(AC180344) Strongylocentrotus purpuratus clone R3-3116G4, WO...    36   8.6    2
(BJ352490) Dictyostelium discoideum cDNA clone:dda46m24, 3' ...    32   9.0    2
(EC906387) XBT_L-1_M05.t Xenoturbella bocki, whole animal ex...    34   9.1    2
(EB245159) PEG003-C-227661-501 Normalized Pedal-Pleural Gang...    36   9.2    2
(AC179673) Strongylocentrotus purpuratus clone R3-14I3, WORK...    40   9.4    2
(FG854491) UCRVU05_CCNN19194_g1 Cowpea IT84S-2049 Mixed Tiss...    34   9.6    2
(EX879312) CcLXAa28n04n1 ECA Cyprinus carpio cDNA clone 28n0...    30   9.9    3

>(C25606) Dictyostelium discoideum slug cDNA, clone SSA259.
          Length = 324

 Score =  377 bits (190), Expect = e-100
 Identities = 190/190 (100%)
 Strand = Plus / Plus


Query: 30  tgagcttatccccggtttcaacccttttaataaatccattgggaaatgttgtttatggta 89
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 30  tgagcttatccccggtttcaacccttttaataaatccattgggaaatgttgtttatggta 89


Query: 90  atccatcctcaccaacatcaacttcatcatcatcatccctaacaccaacatcaaccaacg 149
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90  atccatcctcaccaacatcaacttcatcatcatcatccctaacaccaacatcaaccaacg 149


Query: 150 aagaaatgataaagaaagaagttagtggtacaagtgaaccatcatcaccttctacaggtg 209
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 aagaaatgataaagaaagaagttagtggtacaagtgaaccatcatcaccttctacaggtg 209


Query: 210 agtgttacgg 219
           ||||||||||
Sbjct: 210 agtgttacgg 219

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 238,627,308
Number of extensions: 17671754
Number of successful extensions: 2475388
Number of sequences better than 10.0: 490
Length of query: 323
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 300
Effective length of database: 99,442,330,388
Effective search space: 29832699116400
Effective search space used: 29832699116400
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
protein update 2009. 7.16
Homology vs Protein 
Query= Contig-U01506-1 (Contig-U01506-1Q) /CSM_Contig/Contig-U01506-1Q.Seq.d
         (323 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ224893_1(AJ224893|pid:none) Dictyostelium discoideum srfA gene.      45   8e-04
(Q54TY7) RecName: Full=Serum response factor homolog A; AltName:...    45   8e-04

>AJ224893_1(AJ224893|pid:none) Dictyostelium discoideum srfA gene.
          Length = 420

 Score = 45.1 bits (105), Expect = 8e-04
 Identities = 25/47 (53%), Positives = 26/47 (55%)
 Frame = +2

Query: 29  MSLSPVSTLLINPLGNVVYGNXXXXXXXXXXXXXXXXXXNEEMIKKE 169
           MSLS VS  +INPLGNVVYGN                  NEEMIKKE
Sbjct: 1   MSLSTVSNHIINPLGNVVYGNPSSPTSTSSSSSLTPTSTNEEMIKKE 47

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 204,979,945
Number of extensions: 1541039
Number of successful extensions: 2340
Number of sequences better than 10.0: 2
Number of HSP's gapped: 2340
Number of HSP's successfully gapped: 2
Length of query: 107
Length of database: 1,051,180,864
Length adjustment: 75
Effective length of query: 32
Effective length of database: 808,438,939
Effective search space: 25870046048
Effective search space used: 25870046048
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 28 (15.4 bits)
PSORT 

 psg: 0.89  gvh: 0.50  alm: 0.43  top: 0.33  tms: 0.00  mit: 0.43  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.60  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: mitochondrial
	 24.0 %: nuclear
	 16.0 %: cytoplasmic
	  8.0 %: extracellular, including cell wall
	  8.0 %: endoplasmic reticulum
	  4.0 %: cytoskeletal
	  4.0 %: vacuolar

>> prediction for Contig-U01506-1 is mit
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0