| Contig-U08397-1 |
| Contig ID |
Contig-U08397-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
573 |
| Chromosome number (1..6, M) |
M |
| Chromosome length |
55569 |
| Start point |
579 |
| End point |
139 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
5 |
| Number of EST |
3 |
| Link to clone list |
U08397 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.13 |
| Homology vs DNA |
Query= Contig-U08397-1 (Contig-U08397-1Q) /CSM_Contig/Contig-U08397-1Q.Seq.d
(573 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(D16579) Dictyostelium discoideum mitochondrial genes for Gl... 367 0.0 5
(AB000109) Dictyostelium discoideum mitochondrial DNA, compl... 367 0.0 5
(AU275083) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 226 e-143 5
(AU275082) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 226 e-140 5
(AU275086) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 319 e-122 2
(AU261818) Dictyostelium discoideum vegetative cDNA clone:VS... 367 3e-97 1
(DQ336395) Dictyostelium citrinum mitochondrion, complete ge... 159 2e-85 4
(AU061862) Dictyostelium discoideum slug cDNA, clone SLG383. 151 3e-32 1
(BX620038) Anopheles gambiae EST, clone ANGNP1232F03T7. 50 0.088 1
(BM641346) 17000687307665 A.Gam.ad.cDNA1 Anopheles gambiae c... 50 0.088 1
(AC145960) Gallus gallus BAC clone CH261-18H1 from chromosom... 46 0.15 2
(CR792422) Zebrafish DNA sequence from clone CH211-282B22 in... 34 0.20 2
(EK388610) 1095469492324 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.35 1
(AC019171) Homo sapiens BAC clone RP11-173C1 from 2, complet... 42 0.39 3
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5... 38 0.64 6
(DV739265) ID0AFF13AC02CM1 ID0AFF Acyrthosiphon pisum cDNA c... 34 0.97 2
(DQ793110) Habromys simulatus strain Hsim018TD NADH dehydrog... 36 1.1 2
(DQ793108) Habromys simulatus strain Hsim017TD NADH dehydrog... 36 1.1 2
(AL438562) T3 end of clone XBC0AA001B11 of library XBC0AA fr... 32 1.1 3
(CR933017) Zebrafish DNA sequence from clone DKEY-11D18 in l... 46 1.4 1
(AY309457) Ninox novaeseelandiae mitochondrion, complete gen... 46 1.4 1
(AC190152) Gallus gallus BAC clone CH261-171P12 from chromos... 46 1.4 1
(AC189086) Gallus gallus BAC clone CH261-72K1 from chromosom... 46 1.4 1
(AF224524) Eulemur coronatus isolate JP121 cytochrome oxidas... 46 1.4 1
(AF224522) Eulemur coronatus isolate JP33 cytochrome oxidase... 46 1.4 1
(AM484104) Vitis vinifera contig VV78X199406.2, whole genome... 46 1.4 1
(AP005361) Homo sapiens genomic DNA, chromosome 8q23, clone:... 46 1.4 1
(AC091639) Homo sapiens chromosome 8, clone RP11-61K18, comp... 46 1.4 1
(CT827820) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 1.4 1
(AC223316) Bos taurus clone CH240-422E22, WORKING DRAFT SEQU... 46 1.4 1
(AC218686) Bos taurus clone CH240-297J20, WORKING DRAFT SEQU... 46 1.4 1
(CL577549) OB__Ba0031N15.r OB__Ba Oryza brachyantha genomic ... 46 1.4 1
(AC123521) Oryza sativa (japonica cultivar-group) chromosome... 44 1.4 2
(AC123522) Oryza sativa (japonica cultivar-group) chromosome... 44 1.8 2
(AC160778) Bos taurus clone CH240-96J9, WORKING DRAFT SEQUEN... 38 1.9 3
(BX927369) Zebrafish DNA sequence from clone CH211-134A4 in ... 34 2.7 2
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 34 2.8 6
(CU694445) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 34 2.8 2
(DQ508940) Debaryomyces hansenii mitochondrion, complete gen... 32 3.0 2
(AF172282) Oryza sativa adh1-adh2 region. 44 3.2 2
(AL438318) T3 end of clone BC0AA014G02 of library BC0AA from... 32 3.6 2
(AM686249) Entamoeba terrapinae GSS, clone terra148e06.q1k. 32 3.6 2
(AC216910) Solanum lycopersicum chromosome 9 clone C09SLe006... 44 4.2 2
(AP010136) Lotus japonicus genomic DNA, clone: LjT19A14, TM0... 36 4.6 4
(AC161854) Bos taurus clone CH240-99C5, WORKING DRAFT SEQUEN... 36 4.7 3
(AC147437) Gallus gallus BAC clone CH261-80L21 from chromoso... 44 5.4 1
(AC113067) Mus musculus chromosome 16, clone RP23-264I14, co... 44 5.4 1
(AC099640) Mus musculus chromosome 1, clone RP24-339K18, com... 44 5.4 1
(AP008217) Oryza sativa (japonica cultivar-group) genomic DN... 44 5.4 1
(AM463797) Vitis vinifera contig VV78X186061.6, whole genome... 44 5.4 1
(EA692482) Sequence 71361 from patent US 7365185. 44 5.4 1
(AC109587) Homo sapiens chromosome 3 clone CTD-2013N24, comp... 44 5.4 1
(AC092060) Homo sapiens chromosome 3 clone RP11-582M4, compl... 44 5.4 1
(AC160479) Bos taurus clone CH240-82C6, WORKING DRAFT SEQUEN... 44 5.4 1
(AC118364) Rattus norvegicus clone CH230-325H3, *** SEQUENCI... 44 5.4 1
(AC107250) Rattus norvegicus clone CH230-22P19, WORKING DRAF... 44 5.4 1
(AC094292) Rattus norvegicus clone CH230-3I2, *** SEQUENCING... 44 5.4 1
(AC231157) Bos taurus clone CH240-76B15, WORKING DRAFT SEQUE... 44 5.4 1
(AC226545) Zea mays chromosome 5 clone ZMMBBb-611N24; ZMMBBb... 44 5.4 1
(AC206519) Zea mays chromosome 5 clone CH201-126P14; ZMMBBc0... 44 5.4 1
(AC167616) Bos taurus clone CH240-194C1, WORKING DRAFT SEQUE... 44 5.4 1
(AC012521) Homo sapiens chromosome 3 clone RP1-444J24, WORKI... 44 5.4 1
(BH028193) RPCI-24-324G20.TV RPCI-24 Mus musculus genomic cl... 44 5.4 1
(AZ184302) SP_1002_B2_B07_T7A Strongylocentrotus purpuratus,... 44 5.4 1
(EK476241) 1095469483335 Global-Ocean-Sampling_GS-32-01-01-1... 44 5.4 1
(EK474830) 1095469476242 Global-Ocean-Sampling_GS-32-01-01-1... 44 5.4 1
(ED560757) MUGQ_CH252P141H23Sp6_CN142_090 CHORI-252 Vervet M... 44 5.4 1
(ED537154) KBrB130E15R KBrB, Brassica rapa BamHI BAC library... 44 5.4 1
(DH561851) Rattus norvegicus DNA, BAC clone: RNB1-074C18, 3'... 44 5.4 1
(CG439146) OGVHF09TH ZM_0.7_1.5_KB Zea mays genomic clone ZM... 44 5.4 1
(CG242995) OGVCO67TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 44 5.4 1
(CC342491) OGRAY41TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 44 5.4 1
(CC326851) OGUAG96TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 44 5.4 1
(CC326835) OGUAG96TH ZM_0.7_1.5_KB Zea mays genomic clone ZM... 44 5.4 1
(CC146293) ZMMBBb0007P24.f ZMMBBb Zea mays subsp. mays genom... 44 5.4 1
(AG094721) Pan troglodytes DNA, clone: PTB-095J05.F. 44 5.4 1
(BB349466) Mus musculus 10 days neonate cerebellum cDNA, RIK... 44 5.4 1
(AC173959) Glycine max clone gmw1-27d20, WORKING DRAFT SEQUE... 40 7.0 3
(ES730386) Nad03b_13_D01_C005.g1 Nuphar advena flower bud li... 38 7.9 2
(AE014824) Plasmodium falciparum 3D7 chromosome 14 section 9... 36 8.0 8
(CT573082) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 8.8 4
(CK699925) ZF101-P00083-DEPE-F3_I22 GISZF001_ra Danio rerio ... 34 8.9 2
(FH313558) CHO_OF4482xd16f1.ab1 CHO_OF4 Nicotiana tabacum ge... 40 9.1 2
(AC106549) Rattus norvegicus clone CH230-126G7, *** SEQUENCI... 30 9.1 2
(AC097780) Rattus norvegicus clone CH230-39A11, *** SEQUENCI... 30 9.2 2
(AC130443) Rattus norvegicus clone CH230-290M3, *** SEQUENCI... 30 9.3 2
(AC164894) Bos taurus clone CH240-157O2, WORKING DRAFT SEQUE... 30 9.5 2
(FH313640) CHO_OF4482xd16r1.ab1 CHO_OF4 Nicotiana tabacum ge... 40 9.5 2
(BX649264) Zebrafish DNA sequence from clone CH211-260K9 in ... 32 9.6 2
(AC174705) Bos taurus clone CH240-242E24, WORKING DRAFT SEQU... 30 9.7 2
(EK297310) 1095462351490 Global-Ocean-Sampling_GS-31-01-01-1... 38 9.8 2
(CK396877) AGENCOURT_17255061 NIH_ZGC_4 Danio rerio cDNA clo... 34 9.9 2
(BX119908) Zebrafish DNA sequence from clone CH211-225A3 in ... 32 9.9 2
>(D16579) Dictyostelium discoideum mitochondrial genes for Glu-tRNA,
NADH dehydrogenase subunit 4, NADH dehydrogenase subunit
2, cytochrome oxidase subunit 3, ORF 447, complete
sequence and cds.
Length = 6483
Score = 367 bits (185), Expect(5) = 0.0
Identities = 185/185 (100%)
Strand = Plus / Minus
Query: 389 ggactaatcctatttattatatccgttccttcacatcctattaacattattccacttaat 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ggactaatcctatttattatatccgttccttcacatcctattaacattattccacttaat 293
Query: 449 actattagtattccttgtactcctaatataaatattctttgaaatttttggttcggcatt 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 actattagtattccttgtactcctaatataaatattctttgaaatttttggttcggcatt 233
Query: 509 attttctttcttaatattactcctaatattgctatccctatcactacattcattatactt 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 attttctttcttaatattactcctaatattgctatccctatcactacattcattatactt 173
Query: 569 attgc 573
|||||
Sbjct: 172 attgc 168
Score = 226 bits (114), Expect(5) = 0.0
Identities = 114/114 (100%)
Strand = Plus / Minus
Query: 88 cggttcttgagccccatactcctatcattattaccattgggattagggttgcttcatata 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 cggttcttgagccccatactcctatcattattaccattgggattagggttgcttcatata 592
Query: 148 cgatatataattgcactaaatctgttgctgcaaaaaagtttattattaatattt 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 cgatatataattgcactaaatctgttgctgcaaaaaagtttattattaatattt 538
Score = 153 bits (77), Expect(5) = 0.0
Identities = 77/77 (100%)
Strand = Plus / Minus
Query: 1 actatataagataccaattgacattaacataaatatacttccgattaaagtatagattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 actatataagataccaattgacattaacataaatatacttccgattaaagtatagattaa 678
Query: 61 tatttgaaatgctgcta 77
|||||||||||||||||
Sbjct: 677 tatttgaaatgctgcta 661
Score = 46.1 bits (23), Expect(5) = 0.0
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 203 ctgttaataataacattatttga 225
|||||||||||||||||||||||
Sbjct: 537 ctgttaataataacattatttga 515
Score = 42.1 bits (21), Expect(5) = 0.0
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 228 atttttgttcggttttttctt 248
|||||||||||||||||||||
Sbjct: 513 atttttgttcggttttttctt 493
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 540,221,492
Number of extensions: 33754978
Number of successful extensions: 2807905
Number of sequences better than 10.0: 94
Length of query: 573
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 550
Effective length of database: 93,106,754,628
Effective search space: 51208715045400
Effective search space used: 51208715045400
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.24 |
| Homology vs Protein |
Query= Contig-U08397-1 (Contig-U08397-1Q) /CSM_Contig/Contig-U08397-1Q.Seq.d
(573 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ336395_1(DQ336395|pid:none) Dictyostelium citrinum mitochondri... 154 2e-36
(Q2LCP7) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 80 2e-24
EF081250_8(EF081250|pid:none) Oscarella carmela mitochondrion, c... 51 7e-11
EU237483_11(EU237483|pid:none) Halisarca dujardini mitochondrion... 51 1e-10
EU237476_4(EU237476|pid:none) Aplysina fulva mitochondrion, comp... 52 6e-10
AY320032_7(AY320032|pid:none) Geodia neptuni mitochondrion, comp... 52 8e-10
EF622534_7(EF622534|pid:none) Keratoisidinae sp. BAL208-1 mitoch... 50 2e-09
DQ640649_10(DQ640649|pid:none) Briareum asbestinum mitochondrion... 49 2e-09
EU237475_7(EU237475|pid:none) Agelas schmidti mitochondrion, com... 50 3e-09
AF295546_43(AF295546|pid:none) Malawimonas jakobiformis mitochon... 46 3e-09
EU237487_1(EU237487|pid:none) Plakortis angulospiculatus mitocho... 49 5e-09
EF672731_7(EF672731|pid:none) Acanella eburnea mitochondrion, co... 48 6e-09
DQ287690_11(DQ287690|pid:none) Blastocladiella emersonii mitocho... 44 1e-08
EU237491_11(EU237491|pid:none) Hydra oligactis mitochondrion, co... 48 1e-08
AY863212_13(AY863212|pid:none) Rhizopus oryzae mitochondrion, co... 44 1e-08
AF007261_57(AF007261|pid:none) Reclinomonas americana mitochondr... 49 3e-08
AF353999_36(AF353999|pid:none) Mesostigma viride mitochondrion, ... 46 3e-08
AB061226_1(AB061226|pid:none) Beta vulgaris mitochondrial gene f... 46 5e-08
(P27572) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 46 5e-08
EU414245_1(EU414245|pid:none) Bambusa oldhamii NADH dehydrogenas... 46 5e-08
AF114794_15(AF114794|pid:none) Porphyra purpurea mitochondrion, ... 47 5e-08
AP006444_63(AP006444|pid:none) Brassica napus mitochondrial DNA,... 46 6e-08
EU999004_1(EU999004|pid:none) Arabidopsis thaliana NADH dehydrog... 46 6e-08
CR954200_35(CR954200|pid:none) Ostreococcus tauri mitochondrion,... 42 8e-08
(P26848) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 44 2e-07
AJ310802_1(AJ310802|pid:none) Riccia fluitans mitochondrial part... 44 2e-07
S63659(S63659) NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) cha... 43 2e-07
AJ310801_1(AJ310801|pid:none) Corsinia coriandrina mitochondrial... 44 2e-07
CP000529_1423(CP000529|pid:none) Polaromonas naphthalenivorans C... 43 3e-07
AF494279_31(AF494279|pid:none) Chaetosphaeridium globosum mitoch... 40 3e-07
CP000463_2512(CP000463|pid:none) Rhodopseudomonas palustris BisA... 43 4e-07
AY267353_23(AY267353|pid:none) Chara vulgaris mitochondrion, com... 44 4e-07
EF108342_10(EF108342|pid:none) Mus musculus castaneus strain CAS... 54 4e-07
EU312160_10(EU312160|pid:none) Mus musculus clone P29 mitochondr... 54 4e-07
FJ374650_10(FJ374650|pid:none) Mus musculus domesticus strain MA... 54 4e-07
AK143357_1(AK143357|pid:none) Mus musculus 2 days pregnant adult... 54 4e-07
L12246_1(L12246|pid:none) Lactuca sativa mitochondrial NADH dehy... 42 5e-07
CP000542_2746(CP000542|pid:none) Verminephrobacter eiseniae EF01... 43 5e-07
CP000283_2861(CP000283|pid:none) Rhodopseudomonas palustris BisB... 42 6e-07
CP000301_2389(CP000301|pid:none) Rhodopseudomonas palustris BisB... 42 6e-07
CP001196_1904(CP001196|pid:none) Oligotropha carboxidovorans OM5... 42 6e-07
CP000555_1415(CP000555|pid:none) Methylibium petroleiphilum PM1,... 43 7e-07
AF288090_15(AF288090|pid:none) Rhodomonas salina mitochondrial D... 42 7e-07
EU104721_1(EU104721|pid:none) Rattus norvegicus UChA lineage NAD... 53 7e-07
J01435_8(J01435|pid:none) Rattus norvegicus tRNA-Trp, tRNA-Ala, ... 53 7e-07
EU273709_10(EU273709|pid:none) Rattus exulans isolate RPNGYur 9O... 53 7e-07
AY172581_10(AY172581|pid:none) Rattus norvegicus strain BN/SsNHs... 53 7e-07
DQ673907_10(DQ673907|pid:none) Rattus norvegicus strain WKY/NCrl... 53 7e-07
BX572602_169(BX572602|pid:none) Rhodopseudomonas palustris CGA00... 42 8e-07
AP007255_2775(AP007255|pid:none) Magnetospirillum magneticum AMB... 46 8e-07
CU234118_3951(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 42 8e-07
CP000494_4275(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 42 8e-07
AJ344328_30(AJ344328|pid:none) Laminaria digitata complete mitoc... 41 8e-07
EU273711_10(EU273711|pid:none) Rattus exulans isolate RNZAwa01 m... 53 8e-07
EU273708_10(EU273708|pid:none) Rattus praetor isolate RPNGWig02 ... 53 8e-07
DQ267607_1(DQ267607|pid:none) Sphagnum fallax NADH dehydrogenase... 43 8e-07
AJ409092_1(AJ409092|pid:none) Takakia lepidozioides mitochondria... 41 8e-07
(P48917) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 40 1e-06
BA000040_4905(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 41 1e-06
CP000316_3191(CP000316|pid:none) Polaromonas sp. JS666, complete... 43 1e-06
U40031_3(U40031|pid:none) Reithrodontomys megalotis ND3 and ND4L... 52 1e-06
CP000319_2098(CP000319|pid:none) Nitrobacter hamburgensis X14, c... 41 1e-06
AF513820_10(AF513820|pid:none) Arctocephalus forsteri mitochondr... 53 1e-06
EU352649_10(EU352649|pid:none) Mus terricolor mitochondrion, com... 52 1e-06
AY675564_10(AY675564|pid:none) Mus musculus molossinus mitochond... 52 1e-06
U83801_3(U83801|pid:none) Meriones unguiculatus NADH dehydrogena... 53 1e-06
U83832_3(U83832|pid:none) Reithrodontomys fulvescens NADH dehydr... 52 1e-06
U83822_3(U83822|pid:none) Sigmodon ochrognathus NADH dehydrogena... 51 1e-06
U83831_3(U83831|pid:none) Reithrodontomys megalotis NADH dehydro... 52 1e-06
AP009385_2172(AP009385|pid:none) Burkholderia multivorans ATCC 1... 43 2e-06
CP001025_2130(CP001025|pid:none) Burkholderia ambifaria MC40-6 c... 43 2e-06
CP000614_2293(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 43 2e-06
CP000086_1066(CP000086|pid:none) Burkholderia thailandensis E264... 43 2e-06
CP000440_2267(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 43 2e-06
CP000151_2376(CP000151|pid:none) Burkholderia sp. 383 chromosome... 43 2e-06
BX571965_1235(BX571965|pid:none) Burkholderia pseudomallei strai... 43 2e-06
AM747720_2328(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 43 2e-06
Y08501_47(Y08501|pid:none) Arabidopsis thaliana mitochondrial ge... 41 2e-06
(Q04050) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 41 2e-06
DQ015676_10(DQ015676|pid:none) Microtus rossiaemeridionalis mito... 52 2e-06
EF488916_1(EF488916|pid:none) Arabidopsis thaliana ecotype Colum... 41 2e-06
U83808_3(U83808|pid:none) Clethrionomys gapperi NADH dehydrogena... 52 2e-06
U83803_3(U83803|pid:none) Acomys cahirinus NADH dehydrogenase su... 52 2e-06
DQ793115_3(DQ793115|pid:none) Habromys schmidlyi strain Hschm607... 52 2e-06
DQ793116_3(DQ793116|pid:none) Habromys schmidlyi strain Hschm607... 52 2e-06
DQ793099_3(DQ793099|pid:none) Habromys delicatulus strain Hdeli2... 52 2e-06
AY787795_1(AY787795|pid:none) Rhizomnium pseudopunctatum NADH de... 42 2e-06
AF095244_1(AF095244|pid:none) Brassica rapa subsp. chinensis NAD... 41 2e-06
AP009384_1680(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 45 2e-06
CP001503_2447(CP001503|pid:none) Burkholderia glumae BGR1 chromo... 43 2e-06
AY500367_30(AY500367|pid:none) Desmarestia viridis mitochondrion... 43 2e-06
EU237484_5(EU237484|pid:none) Hippospongia lachne mitochondrion,... 44 2e-06
AJ409093_1(AJ409093|pid:none) Timmia bavarica mitochondrial part... 41 2e-06
DQ077695_3(DQ077695|pid:none) Peromyscus maniculatus isolate VD2... 51 2e-06
DQ077696_3(DQ077696|pid:none) Peromyscus maniculatus isolate LH2... 51 2e-06
U40248_3(U40248|pid:none) Peromyscus slevini ND3 and ND4L genes,... 51 2e-06
U40249_3(U40249|pid:none) Peromyscus maniculatus austerus ND3 an... 51 2e-06
U40247_3(U40247|pid:none) Peromyscus melanotis ND3 and ND4L gene... 51 2e-06
U40250_3(U40250|pid:none) Peromyscus maniculatus rufinus ND3 and... 51 2e-06
AF374553_3(AF374553|pid:none) Peromyscus maniculatus isolate Tri... 51 2e-06
DQ077697_3(DQ077697|pid:none) Peromyscus maniculatus isolate VLL... 51 2e-06
U83860_3(U83860|pid:none) Osgoodomys banderanus NADH dehydrogena... 51 2e-06
U83864_3(U83864|pid:none) Peromyscus boylii NADH dehydrogenase s... 51 2e-06
T17087(T17087) NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) cha... 51 2e-06
U83829_3(U83829|pid:none) Baiomys taylori NADH dehydrogenase sub... 51 2e-06
DQ793104_2(DQ793104|pid:none) Habromys lepturus strain Hlep35232... 51 2e-06
DQ793094_3(DQ793094|pid:none) Habromys lophurus strain Hloph888 ... 51 2e-06
DQ793114_2(DQ793114|pid:none) Habromys simulatus strain Hsim169 ... 51 2e-06
DQ793105_3(DQ793105|pid:none) Habromys lepturus strain Hlep33630... 51 2e-06
DQ077702_3(DQ077702|pid:none) Peromyscus maniculatus isolate LVT... 51 3e-06
DQ077701_3(DQ077701|pid:none) Peromyscus maniculatus isolate LVT... 51 3e-06
DQ077698_3(DQ077698|pid:none) Peromyscus maniculatus isolate GN5... 51 3e-06
EU400214_7(EU400214|pid:none) Stylophora pistillata mitochondrio... 54 3e-06
CP000356_1285(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 44 3e-06
CP000267_1476(CP000267|pid:none) Rhodoferax ferrireducens T118, ... 40 3e-06
AY500368_31(AY500368|pid:none) Dictyota dichotoma mitochondrion,... 46 3e-06
AY634402_1(AY634402|pid:none) Felis bieti NADH dehydrogenase sub... 52 3e-06
AY634396_1(AY634396|pid:none) Panthera tigris NADH dehydrogenase... 52 3e-06
AY634399_1(AY634399|pid:none) Otocolobus manul NADH dehydrogenas... 52 3e-06
U83811_3(U83811|pid:none) Nyctomys sumichrasti NADH dehydrogenas... 51 3e-06
U83862_3(U83862|pid:none) Peromyscus mexicanus NADH dehydrogenas... 51 3e-06
U83830_3(U83830|pid:none) Ochrotomys nuttali NADH dehydrogenase ... 51 3e-06
EU400212_7(EU400212|pid:none) Madracis mirabilis mitochondrion, ... 54 4e-06
CP000157_1321(CP000157|pid:none) Erythrobacter litoralis HTCC259... 45 4e-06
CP000449_1363(CP000449|pid:none) Maricaulis maris MCS10, complet... 44 4e-06
CP001068_2169(CP001068|pid:none) Ralstonia pickettii 12J chromos... 43 4e-06
AP006473_10(AP006473|pid:none) Eubalaena australis mitochondrial... 52 4e-06
AM181016_10(AM181016|pid:none) Callorhinus ursinus complete mito... 52 4e-06
DQ904394_1(DQ904394|pid:none) Panthera pardus NADH dehydrogenase... 52 4e-06
AM181021_10(AM181021|pid:none) Arctocephalus townsendi complete ... 52 4e-06
AJ416891_10(AJ416891|pid:none) Spalax ehrenbergi complete mitoch... 49 4e-06
AY634403_1(AY634403|pid:none) Panthera onca NADH dehydrogenase s... 52 4e-06
U83809_3(U83809|pid:none) Ondatra zibethicus NADH dehydrogenase ... 51 4e-06
U83863_3(U83863|pid:none) Habromys lophurus NADH dehydrogenase s... 50 4e-06
U83828_3(U83828|pid:none) Scotinomys teguina NADH dehydrogenase ... 50 4e-06
U83819_3(U83819|pid:none) Calomys callosus NADH dehydrogenase su... 51 4e-06
DQ793091_3(DQ793091|pid:none) Habromys lophurus strain Hloph1335... 50 4e-06
DQ793090_3(DQ793090|pid:none) Habromys lophurus strain Hloph1342... 50 4e-06
DQ793095_3(DQ793095|pid:none) Habromys lophurus strain Hloph022C... 50 4e-06
FM179380_125(FM179380|pid:none) Vitis vinifera complete mitochon... 39 5e-06
CU633749_1020(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 42 5e-06
CP000090_970(CP000090|pid:none) Ralstonia eutropha JMP134 chromo... 41 5e-06
AJ277126_35(AJ277126|pid:none) Pilayella littoralis complete mit... 40 5e-06
EF452820_1(EF452820|pid:none) Microrasbora rubescens NADH dehydr... 52 5e-06
AP008946_10(AP008946|pid:none) Oryzias latipes mitochondrial DNA... 51 5e-06
AP009185_10(AP009185|pid:none) Thamnaconus modestus mitochondria... 49 5e-06
AP009217_10(AP009217|pid:none) Eubalichthys mosaicus mitochondri... 49 5e-06
AP009225_10(AP009225|pid:none) Pseudomonacanthus peroni mitochon... 49 5e-06
AP009219_10(AP009219|pid:none) Monacanthus chinensis mitochondri... 48 5e-06
EF551002_10(EF551002|pid:none) Panthera pardus mitochondrion, co... 52 5e-06
AY598491_1(AY598491|pid:none) Puma concolor NADH dehydrogenase s... 52 5e-06
AY769263_10(AY769263|pid:none) Crocidura russula haplotype H1 mi... 51 5e-06
DQ529667_4(DQ529667|pid:none) Lepilemur ruficaudatus isolate ZOM... 50 5e-06
EF108345_10(EF108345|pid:none) Mus musculus molossinus strain MO... 50 5e-06
AY634397_1(AY634397|pid:none) Neofelis nebulosa NADH dehydrogena... 52 5e-06
AY634398_1(AY634398|pid:none) Panthera leo NADH dehydrogenase su... 52 5e-06
AY634394_1(AY634394|pid:none) Uncia uncia NADH dehydrogenase sub... 52 5e-06
AY634395_1(AY634395|pid:none) Panthera pardus NADH dehydrogenase... 52 5e-06
CP000237_665(CP000237|pid:none) Neorickettsia sennetsu strain Mi... 42 5e-06
U40063_3(U40063|pid:none) Peromyscus maniculatus interdictus ND3... 50 5e-06
U83865_3(U83865|pid:none) Podomys floridanus NADH dehydrogenase ... 50 5e-06
U83814_3(U83814|pid:none) Notiomys edwardsii NADH dehydrogenase ... 50 5e-06
U83824_3(U83824|pid:none) Reithrodon auritus NADH dehydrogenase ... 50 5e-06
(O47497) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 53 7e-06
AB061528_10(AB061528|pid:none) Pipistrellus abramus mitochondria... 53 7e-06
DQ643835_6(DQ643835|pid:none) Nematostella sp. JVK-2006 mitochon... 53 7e-06
CP000908_1048(CP000908|pid:none) Methylobacterium extorquens PA1... 42 7e-06
CP001298_1120(CP001298|pid:none) Methylobacterium chloromethanic... 42 7e-06
CP001029_987(CP001029|pid:none) Methylobacterium populi BJ001, c... 42 7e-06
CP000633_1272(CP000633|pid:none) Agrobacterium vitis S4 chromoso... 44 7e-06
CP000872_787(CP000872|pid:none) Brucella canis ATCC 23365 chromo... 45 7e-06
CP000708_743(CP000708|pid:none) Brucella ovis ATCC 25840 chromos... 45 7e-06
AD3395(AD3395) NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) [im... 45 7e-06
BA000012_1065(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 45 7e-06
FJ648425_9(FJ648425|pid:none) Glomus intraradices isolate FACE#4... 41 7e-06
AP009221_10(AP009221|pid:none) Oxymonacanthus longirostris mitoc... 48 7e-06
FJ429093_10(FJ429093|pid:none) Martes zibellina mitochondrion, c... 51 7e-06
AY377347_1(AY377347|pid:none) Mustela vison NADH dehydrogenase s... 51 7e-06
AF224583_4(AF224583|pid:none) Hapalemur simus isolate JP127 cyto... 50 7e-06
AY582548_4(AY582548|pid:none) Hapalemur simus isolate KIAN124 cy... 50 7e-06
DQ529660_4(DQ529660|pid:none) Lepilemur randrianasoli isolate BE... 50 7e-06
AF224581_4(AF224581|pid:none) Hapalemur aureus isolate JP143 cyt... 50 7e-06
AF224531_4(AF224531|pid:none) Eulemur macaco flavifrons isolate ... 50 7e-06
AF224596_4(AF224596|pid:none) Lepilemur ruficaudatus cytochrome ... 50 7e-06
FJ905815_10(FJ905815|pid:none) Rhinoceros sondaicus mitochondrio... 50 7e-06
DQ856051_4(DQ856051|pid:none) Avahi laniger isolate RANO66 cytoc... 50 7e-06
AM904729_10(AM904729|pid:none) Eremitalpa granti complete mitoch... 49 7e-06
AF100725_1(AF100725|pid:none) Marmota bobak NADH dehydrogenase s... 51 7e-06
U83802_3(U83802|pid:none) Mystromys albicaudatus NADH dehydrogen... 51 7e-06
U83807_3(U83807|pid:none) Phenacomys intermedius NADH dehydrogen... 50 7e-06
(O21521) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 50 7e-06
DQ793101_3(DQ793101|pid:none) Habromys ixtlani strain Hixt33599O... 50 7e-06
DQ304771_5(DQ304771|pid:none) Chrysopathes formosa mitochondrion... 52 9e-06
EU237481_7(EU237481|pid:none) Ephydatia muelleri mitochondrion, ... 52 9e-06
EU237488_8(EU237488|pid:none) Ptilocaulis walpersi mitochondrion... 52 9e-06
(P50974) RecName: Full=NADH-quinone oxidoreductase subunit M; ... 44 9e-06
CP000943_4156(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 42 9e-06
CP001349_3964(CP001349|pid:none) Methylobacterium nodulans ORS 2... 42 9e-06
CP001016_2338(CP001016|pid:none) Beijerinckia indica subsp. indi... 40 9e-06
AB2734(AB2734) NADH dehydrogenase I chain M nuoM [imported] - Ag... 46 9e-06
AM743169_3203(AM743169|pid:none) Stenotrophomonas maltophilia K2... 43 9e-06
CP001111_2814(CP001111|pid:none) Stenotrophomonas maltophilia R5... 43 9e-06
BX640433_157(BX640433|pid:none) Bordetella parapertussis strain ... 44 9e-06
CP000941_250(CP000941|pid:none) Xylella fastidiosa M12, complete... 43 9e-06
AE009442_238(AE009442|pid:none) Xylella fastidiosa Temecula1, co... 43 9e-06
AE013598_3152(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 43 9e-06
AM039952_2841(AM039952|pid:none) Xanthomonas campestris pv. vesi... 43 9e-06
CP000967_3414(CP000967|pid:none) Xanthomonas oryzae pv. oryzae P... 43 9e-06
CP001392_873(CP001392|pid:none) Diaphorobacter sp. TPSY, complet... 42 9e-06
CP000884_5150(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 42 9e-06
BX897699_863(BX897699|pid:none) Bartonella henselae strain Houst... 43 9e-06
CP000352_939(CP000352|pid:none) Ralstonia metallidurans CH34, co... 42 9e-06
AP002975_10(AP002975|pid:none) Notacanthus chemnitzi mitochondri... 50 9e-06
AP009228_10(AP009228|pid:none) Scobinichthys granulatus mitochon... 47 9e-06
AP009212_10(AP009212|pid:none) Acanthaluteres brownii mitochondr... 47 9e-06
DQ529693_4(DQ529693|pid:none) Lepilemur microdon isolate AND20 c... 50 9e-06
AF224616_4(AF224616|pid:none) Cheirogaleus medius isolate JP282 ... 50 9e-06
(P41298) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 50 9e-06
AB201258_10(AB201258|pid:none) Balaenoptera edeni mitochondrial ... 50 9e-06
AF348081_10(AF348081|pid:none) Soriculus fumidus mitochondrion, ... 50 9e-06
AF224614_4(AF224614|pid:none) Cheirogaleus medius isolate JP6 cy... 50 9e-06
AP006470_10(AP006470|pid:none) Balaenoptera borealis mitochondri... 50 9e-06
AB201259_10(AB201259|pid:none) Balaenoptera brydei mitochondrial... 50 9e-06
AY398631_2(AY398631|pid:none) Balaenoptera edeni voucher Z11995 ... 50 9e-06
(Q95917) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 49 9e-06
DQ529720_4(DQ529720|pid:none) Lepilemur ankaranensis isolate FIA... 49 9e-06
(Q85DA7) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 49 9e-06
DQ529620_4(DQ529620|pid:none) Lepilemur ankaranensis isolate DAR... 49 9e-06
DQ856075_4(DQ856075|pid:none) Avahi laniger isolate TAD1 cytochr... 49 9e-06
DQ529619_4(DQ529619|pid:none) Lepilemur ankaranensis isolate DAR... 49 9e-06
AY582592_4(AY582592|pid:none) Lepilemur dorsalis isolate GAR1 cy... 49 9e-06
DQ529650_4(DQ529650|pid:none) Lepilemur dorsalis isolate LOKO4.2... 49 9e-06
DQ529658_4(DQ529658|pid:none) Lepilemur dorsalis isolate LOKO4.3... 49 9e-06
DQ529654_4(DQ529654|pid:none) Lepilemur dorsalis isolate LOKO4.2... 49 9e-06
AJ310800_1(AJ310800|pid:none) Bazzania trilobata mitochondrial p... 39 9e-06
U83825_3(U83825|pid:none) Nelsonia neotomodon NADH dehydrogenase... 49 9e-06
U83812_3(U83812|pid:none) Akodon andinus NADH dehydrogenase subu... 50 9e-06
AJ536482_1(AJ536482|pid:none) Actinidia chinensis partial mitoch... 38 9e-06
AJ536478_1(AJ536478|pid:none) Actinidia polygama partial mitocho... 38 9e-06
AJ536483_1(AJ536483|pid:none) Clematoclethra lasioclada var. gra... 38 9e-06
AM889285_593(AM889285|pid:none) Gluconacetobacter diazotrophicus... 45 1e-05
CP000661_1971(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 44 1e-05
AF312391_3(AF312391|pid:none) Cottus cognatus tRNA-Gly gene, par... 52 1e-05
CP001189_1385(CP001189|pid:none) Gluconacetobacter diazotrophicu... 45 1e-05
CP000133_1594(CP000133|pid:none) Rhizobium etli CFN 42, complete... 43 1e-05
CP001389_1044(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 43 1e-05
AP009247_232(AP009247|pid:none) Candidatus Vesicomyosocius okuta... 43 1e-05
CP001154_536(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 42 1e-05
AJ245399_6(AJ245399|pid:none) Sinorhizobium meliloti ORF-378 (pa... 42 1e-05
CP000739_50(CP000739|pid:none) Sinorhizobium medicae WSM419 plas... 42 1e-05
CP001010_706(CP001010|pid:none) Polynucleobacter necessarius sub... 44 1e-05
AF222718_14(AF222718|pid:none) Chrysodidymus synuroideus mitocho... 42 1e-05
AF273111_1(AF273111|pid:none) Ochotona thomasi NADH dehydrogenas... 51 1e-05
AF273113_1(AF273113|pid:none) Ochotona nubrica NADH dehydrogenas... 51 1e-05
AF273123_1(AF273123|pid:none) Ochotona curzoniae isolate 93J035 ... 51 1e-05
AF273110_1(AF273110|pid:none) Ochotona thibetana NADH dehydrogen... 51 1e-05
AP004449_10(AP004449|pid:none) Enedrias crassispina mitochondria... 51 1e-05
EF427917_9(EF427917|pid:none) Anarhichas minor mitochondrion, co... 51 1e-05
AY525783_10(AY525783|pid:none) Raja porosa mitochondrion, comple... 50 1e-05
AB046473_12(AB046473|pid:none) Eurypharynx pelecanoides mitochon... 49 1e-05
AP009213_10(AP009213|pid:none) Acreichthys tomentosus mitochondr... 48 1e-05
DQ529692_4(DQ529692|pid:none) Lepilemur mustelinus isolate FAN4.... 50 1e-05
AY398633_2(AY398633|pid:none) Balaenoptera bonaerensis voucher Z... 50 1e-05
AM181018_10(AM181018|pid:none) Arctocephalus pusillus complete m... 50 1e-05
AY582612_4(AY582612|pid:none) Lepilemur mustelinus isolate M83B ... 50 1e-05
DQ312376_3(DQ312376|pid:none) Vampyressa nymphaea voucher TK1357... 50 1e-05
(P24975) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 50 1e-05
AB205183_10(AB205183|pid:none) Rousettus aegyptiacus mitochondri... 50 1e-05
AY582629_4(AY582629|pid:none) Lepilemur mustelinus isolate ZAH20... 50 1e-05
DQ529672_4(DQ529672|pid:none) Lepilemur aeeclis isolate JAM4.9 c... 50 1e-05
AY582624_4(AY582624|pid:none) Lepilemur mustelinus isolate TSINJ... 50 1e-05
DQ529671_4(DQ529671|pid:none) Lepilemur aeeclis isolate JAM4.8 c... 50 1e-05
DQ529687_4(DQ529687|pid:none) Lepilemur mustelinus isolate TAD4.... 50 1e-05
AY582609_4(AY582609|pid:none) Lepilemur mustelinus isolate BET21... 50 1e-05
AY582610_4(AY582610|pid:none) Lepilemur mustelinus isolate FAN10... 50 1e-05
EF196663_10(EF196663|pid:none) Ailuropoda melanoleuca mitochondr... 50 1e-05
DQ529696_4(DQ529696|pid:none) Lepilemur mustelinus isolate MIZA1... 50 1e-05
AY582607_4(AY582607|pid:none) Lepilemur mustelinus isolate ANOSI... 50 1e-05
AM711896_10(AM711896|pid:none) Ailuropoda melanoleuca complete m... 50 1e-05
DQ529670_4(DQ529670|pid:none) Lepilemur aeeclis isolate PBZT119 ... 50 1e-05
AF224593_4(AF224593|pid:none) Lepilemur edwardsi isolate JP163 c... 50 1e-05
AM904728_10(AM904728|pid:none) Trichechus manatus complete mitoc... 50 1e-05
AY582654_4(AY582654|pid:none) Microcebus murinus isolate MOR62 c... 50 1e-05
AF224629_4(AF224629|pid:none) Microcebus murinus isolate JP313 c... 50 1e-05
AY582655_4(AY582655|pid:none) Microcebus murinus isolate MOR100 ... 50 1e-05
DQ312364_3(DQ312364|pid:none) Stenoderma rufum voucher TK28515 N... 50 1e-05
AF224573_4(AF224573|pid:none) Hapalemur griseus griseus isolate ... 50 1e-05
AF224628_4(AF224628|pid:none) Microcebus murinus isolate JP308 c... 50 1e-05
AF224624_4(AF224624|pid:none) Microcebus murinus isolate JP285 c... 50 1e-05
DQ529737_4(DQ529737|pid:none) Lepilemur sahamalazensis isolate L... 49 1e-05
AF273135_1(AF273135|pid:none) Ochotona daurica bedfordi NADH deh... 51 1e-05
AF273134_1(AF273134|pid:none) Ochotona daurica daurica NADH dehy... 51 1e-05
EU011567_1(EU011567|pid:none) Batrachoseps attenuatus voucher DB... 50 1e-05
EU011566_1(EU011566|pid:none) Batrachoseps attenuatus voucher DB... 50 1e-05
(O21515) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 49 1e-05
T17092(T17092) NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) cha... 49 1e-05
U83826_3(U83826|pid:none) Neotoma lepida NADH dehydrogenase subu... 49 1e-05
U83817_3(U83817|pid:none) Calomys musculinus NADH dehydrogenase ... 49 1e-05
CP001280_2861(CP001280|pid:none) Methylocella silvestris BL2, co... 41 1e-05
CP000390_1026(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 45 1e-05
CP001358_1635(CP001358|pid:none) Desulfovibrio desulfuricans sub... 41 1e-05
CU695239_285(CU695239|pid:none) Ralstonia solanacearum strain Mo... 44 1e-05
AL646052_2049(AL646052|pid:none) Ralstonia solanacearum GMI1000 ... 44 1e-05
(Q0H8X6) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 40 1e-05
AB300608_10(AB300608|pid:none) Eumetopias jubatus mitochondrial ... 50 1e-05
AJ428578_10(AJ428578|pid:none) Eumetopias jubatus complete mitoc... 50 1e-05
AB445128_10(AB445128|pid:none) Spinachia spinachia mitochondrial... 51 1e-05
AP004421_10(AP004421|pid:none) Oryzias latipes mitochondrial DNA... 50 1e-05
AP008940_10(AP008940|pid:none) Oryzias latipes mitochondrial DNA... 50 1e-05
AP008942_10(AP008942|pid:none) Oryzias latipes mitochondrial DNA... 50 1e-05
AP004441_10(AP004441|pid:none) Satyrichthys amiscus mitochondria... 50 1e-05
AP008939_10(AP008939|pid:none) Oryzias latipes mitochondrial DNA... 50 1e-05
AP008945_10(AP008945|pid:none) Oryzias latipes mitochondrial DNA... 50 1e-05
AP008944_10(AP008944|pid:none) Oryzias latipes mitochondrial DNA... 50 1e-05
AP009196_10(AP009196|pid:none) Aulorhynchus flavidus mitochondri... 50 1e-05
AJ584641_10(AJ584641|pid:none) Erpetoichthys calabaricus complet... 50 1e-05
AF106038_10(AF106038|pid:none) Raja radiata mitochondrion, compl... 50 1e-05
AB445126_10(AB445126|pid:none) Apeltes quadracus mitochondrial D... 49 1e-05
AP006813_10(AP006813|pid:none) Elassoma zonatum mitochondrial DN... 49 1e-05
AF036192_2(AF036192|pid:none) Xenocyprioides parvulus NADH ubiqu... 49 1e-05
(Q2I3G5) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 51 1e-05
FJ853422_10(FJ853422|pid:none) Chiloscyllium plagiosum voucher F... 50 1e-05
EU557091_10(EU557091|pid:none) Sousa chinensis mitochondrion, co... 50 1e-05
EU557092_10(EU557092|pid:none) Tursiops aduncus mitochondrion, c... 50 1e-05
EU557097_10(EU557097|pid:none) Stenella coeruleoalba mitochondri... 50 1e-05
EU557093_10(EU557093|pid:none) Tursiops truncatus mitochondrion,... 50 1e-05
AY728228_10(AY728228|pid:none) Batrachoseps attenuatus mitochond... 50 1e-05
(O21334) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 50 1e-05
EU557096_10(EU557096|pid:none) Stenella attenuata mitochondrion,... 50 1e-05
DQ312375_3(DQ312375|pid:none) Vampyressa nymphaea voucher TK1357... 50 1e-05
AY598581_1(AY598581|pid:none) Procyon lotor NADH dehydrogenase s... 50 1e-05
AM181024_10(AM181024|pid:none) Lobodon carcinophaga complete mit... 50 1e-05
DQ312377_3(DQ312377|pid:none) Vampyressa nymphaea voucher TK1358... 50 1e-05
AM711899_10(AM711899|pid:none) Procyon lotor complete mitochondr... 50 1e-05
AY377335_1(AY377335|pid:none) Mirounga leonina NADH dehydrogenas... 50 1e-05
AM181023_10(AM181023|pid:none) Mirounga leonina complete mitocho... 50 1e-05
AJ428947_10(AJ428947|pid:none) Tapirus terrestris complete mitoc... 50 1e-05
AJ277029_10(AJ277029|pid:none) Physeter macrocephalus mitochondr... 50 1e-05
AY582659_4(AY582659|pid:none) Microcebus griseorufus isolate PET... 49 1e-05
AF224565_4(AF224565|pid:none) Eulemur fulvus albifrons isolate J... 49 1e-05
AY582637_4(AY582637|pid:none) Microcebus mittermeieri isolate JA... 49 1e-05
(Q591M5) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 49 1e-05
AF224528_4(AF224528|pid:none) Eulemur macaco macaco isolate JP80... 49 1e-05
AF224534_4(AF224534|pid:none) Eulemur fulvus fulvus isolate JP41... 49 1e-05
AF224561_4(AF224561|pid:none) Eulemur fulvus sanfordi isolate JP... 49 1e-05
AF224544_4(AF224544|pid:none) Eulemur fulvus rufus isolate JP123... 49 1e-05
(Q34878) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 49 1e-05
AF224637_4(AF224637|pid:none) Microcebus rufus isolate JP315 cyt... 49 1e-05
T11346(T11346) NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) cha... 49 1e-05
AF224552_4(AF224552|pid:none) Eulemur fulvus rufus isolate JP333... 49 1e-05
AF224548_4(AF224548|pid:none) Eulemur fulvus rufus isolate JP176... 49 1e-05
AF224550_4(AF224550|pid:none) Eulemur fulvus rufus isolate JP206... 49 1e-05
AF224634_4(AF224634|pid:none) Microcebus rufus isolate JP141 cyt... 49 1e-05
AF224639_4(AF224639|pid:none) Microcebus rufus isolate JP317 cyt... 49 1e-05
AY582652_4(AY582652|pid:none) Microcebus rufus isolate RANO264 c... 49 1e-05
AF224547_4(AF224547|pid:none) Eulemur fulvus rufus isolate JP171... 49 1e-05
AF224549_4(AF224549|pid:none) Eulemur fulvus rufus isolate JP181... 49 1e-05
AF224545_4(AF224545|pid:none) Eulemur fulvus rufus isolate JP161... 49 1e-05
DQ529631_4(DQ529631|pid:none) Lepilemur leucopus isolate AND67 c... 49 1e-05
AY582587_4(AY582587|pid:none) Lepilemur leucopus isolate BEZ14 c... 49 1e-05
DQ529637_4(DQ529637|pid:none) Lepilemur leucopus isolate AND93 c... 49 1e-05
AM159537_10(AM159537|pid:none) Anomalurus sp. GP-2005 complete m... 48 1e-05
AF224620_4(AF224620|pid:none) Allocebus trichotis cytochrome oxi... 47 1e-05
AY634405_1(AY634405|pid:none) Paguma larvata NADH dehydrogenase ... 50 1e-05
AM181019_10(AM181019|pid:none) Phocarctos hookeri complete mitoc... 52 1e-05
DQ640648_6(DQ640648|pid:none) Ricordea florida mitochondrion, co... 52 1e-05
AY320033_8(AY320033|pid:none) Tethya actinia mitochondrion, comp... 52 1e-05
AY574046_10(AY574046|pid:none) Sus scrofa breed Hampshire mitoch... 52 1e-05
EU273284_10(EU273284|pid:none) Acanthurus lineatus mitochondrion... 52 1e-05
AY377343_1(AY377343|pid:none) Odobenus rosmarus NADH dehydrogena... 52 1e-05
AJ428576_9(AJ428576|pid:none) Odobenus rosmarus rosmarus complet... 52 1e-05
EU011552_1(EU011552|pid:none) Batrachoseps attenuatus voucher DB... 50 1e-05
EU011539_1(EU011539|pid:none) Batrachoseps attenuatus voucher IM... 50 1e-05
EU011526_1(EU011526|pid:none) Batrachoseps attenuatus voucher CA... 50 1e-05
EU011532_1(EU011532|pid:none) Batrachoseps attenuatus voucher MV... 50 1e-05
EU011548_1(EU011548|pid:none) Batrachoseps attenuatus voucher IM... 50 1e-05
EU011550_1(EU011550|pid:none) Batrachoseps attenuatus voucher IM... 50 1e-05
EU011546_1(EU011546|pid:none) Batrachoseps attenuatus voucher IM... 50 1e-05
EU011530_1(EU011530|pid:none) Batrachoseps attenuatus voucher MV... 50 1e-05
EU011537_1(EU011537|pid:none) Batrachoseps attenuatus voucher TJ... 50 1e-05
EU011538_1(EU011538|pid:none) Batrachoseps attenuatus voucher IM... 50 1e-05
EU011531_1(EU011531|pid:none) Batrachoseps attenuatus voucher MV... 50 1e-05
EU011564_1(EU011564|pid:none) Batrachoseps attenuatus voucher DB... 50 1e-05
EU011544_1(EU011544|pid:none) Batrachoseps attenuatus voucher IM... 50 1e-05
EU011533_1(EU011533|pid:none) Batrachoseps attenuatus voucher MV... 50 1e-05
U83820_3(U83820|pid:none) Oryzomys albigularis NADH dehydrogenas... 49 2e-05
CP000143_1121(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c... 43 2e-05
CP001074_1665(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 42 2e-05
CU459003_3701(CU459003|pid:none) Magnetospirillum gryphiswaldens... 42 2e-05
CP001052_1317(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 41 2e-05
AY962590_7(AY962590|pid:none) Candida orthopsilosis strain MCO45... 39 2e-05
AP003090_10(AP003090|pid:none) Arctoscopus japonicus mitochondri... 50 2e-05
AF273121_1(AF273121|pid:none) Ochotona erythrotis NADH dehydroge... 50 2e-05
AP004416_10(AP004416|pid:none) Chaunax tosaensis mitochondrial D... 50 2e-05
AP004415_10(AP004415|pid:none) Chaunax abei mitochondrial DNA, c... 50 2e-05
AF273130_1(AF273130|pid:none) Ochotona alpina NADH dehydrogenase... 50 2e-05
AY442348_10(AY442348|pid:none) Erpetoichthys calabaricus mitocho... 50 2e-05
AM905040_10(AM905040|pid:none) Eulemur mongoz complete mitochond... 49 2e-05
DQ376035_11(DQ376035|pid:none) Candida parapsilosis strain CLIB2... 39 2e-05
EU557095_10(EU557095|pid:none) Grampus griseus mitochondrion, co... 50 2e-05
AM181020_10(AM181020|pid:none) Neophoca cinerea complete mitocho... 50 2e-05
DQ529606_4(DQ529606|pid:none) Lepilemur edwardsi isolate MAR1 cy... 49 2e-05
DQ529613_4(DQ529613|pid:none) Lepilemur edwardsi isolate MAR27 c... 49 2e-05
AF224595_4(AF224595|pid:none) Lepilemur edwardsi isolate JP259 c... 49 2e-05
AB291075_10(AB291075|pid:none) Meles meles anakuma mitochondrial... 49 2e-05
AM711901_10(AM711901|pid:none) Gulo gulo complete mitochondrial ... 49 2e-05
AY582585_4(AY582585|pid:none) Lepilemur edwardsi isolate ANK4 cy... 49 2e-05
AY873843_10(AY873843|pid:none) Herpestes javanicus mitochondrion... 49 2e-05
AF224562_4(AF224562|pid:none) Eulemur fulvus albocollaris isolat... 49 2e-05
AF224516_4(AF224516|pid:none) Eulemur mongoz isolate JP178 cytoc... 49 2e-05
AF224559_4(AF224559|pid:none) Eulemur fulvus collaris isolate JP... 49 2e-05
AF224619_4(AF224619|pid:none) Cheirogaleus major isolate JP118 c... 49 2e-05
AF224515_4(AF224515|pid:none) Eulemur mongoz isolate JP177 cytoc... 49 2e-05
AF224519_4(AF224519|pid:none) Eulemur mongoz isolate JP220 cytoc... 49 2e-05
AF224618_4(AF224618|pid:none) Cheirogaleus major isolate JP138 c... 49 2e-05
Y19192_10(Y19192|pid:none) Talpa europaea complete mitochondrial... 49 2e-05
FJ905814_10(FJ905814|pid:none) Diceros bicornis mitochondrion, c... 49 2e-05
DQ856060_4(DQ856060|pid:none) Avahi laniger isolate M86b cytochr... 47 2e-05
DQ856067_4(DQ856067|pid:none) Avahi laniger isolate M159 cytochr... 47 2e-05
DQ856061_4(DQ856061|pid:none) Avahi laniger isolate M89b cytochr... 47 2e-05
DQ026513_8(DQ026513|pid:none) Candida orthopsilosis strain MCO47... 39 2e-05
AY391853_7(AY391853|pid:none) Candida metapsilosis strain PL448 ... 39 2e-05
AM181022_10(AM181022|pid:none) Monachus schauinslandi complete m... 49 2e-05
AF312390_3(AF312390|pid:none) Cottus hypselurus tRNA-Gly gene, p... 50 2e-05
AF100729_1(AF100729|pid:none) Marmota flaviventris NADH dehydrog... 49 2e-05
AF100728_1(AF100728|pid:none) Marmota marmota NADH dehydrogenase... 49 2e-05
AM690374_9(AM690374|pid:none) Suberites domuncula complete mitoc... 51 2e-05
AF224580_4(AF224580|pid:none) Hapalemur griseus occidentalis iso... 51 2e-05
AY582551_4(AY582551|pid:none) Hapalemur griseus griseus isolate ... 51 2e-05
AY582554_4(AY582554|pid:none) Hapalemur griseus occidentalis iso... 51 2e-05
DQ826591_6(DQ826591|pid:none) Rhabdocalyptus dawsoni mitochondri... 51 2e-05
AM711898_10(AM711898|pid:none) Spilogale putorius complete mitoc... 51 2e-05
AP007276_10(AP007276|pid:none) Denticeps clupeoides mitochondria... 51 2e-05
AY582553_4(AY582553|pid:none) Hapalemur griseus occidentalis iso... 51 2e-05
CP001001_2015(CP001001|pid:none) Methylobacterium radiotolerans ... 41 2e-05
CP001191_1264(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 42 2e-05
CP000084_885(CP000084|pid:none) Candidatus Pelagibacter ubique H... 41 2e-05
CP001227_605(CP001227|pid:none) Rickettsia peacockii str. Rustic... 42 2e-05
CP000409_973(CP000409|pid:none) Rickettsia canadensis str. McKie... 40 2e-05
CP000116_1154(CP000116|pid:none) Thiobacillus denitrificans ATCC... 37 2e-05
DQ984518_28(DQ984518|pid:none) Sorghum bicolor mitochondrion, co... 37 2e-05
BA000029_24(BA000029|pid:none) Oryza sativa Japonica Group mitoc... 37 2e-05
AY506529_30(AY506529|pid:none) Zea mays strain NB mitochondrion,... 37 2e-05
X57163_1(X57163|pid:none) T.aestivum nad4 mRNA for NADH-ubiquino... 37 2e-05
EF537576_15(EF537576|pid:none) Iphiteon panicea mitochondrion, p... 46 2e-05
AP002944_10(AP002944|pid:none) Gasterosteus aculeatus mitochondr... 50 2e-05
EU043377_10(EU043377|pid:none) Epinephelus akaara mitochondrion,... 50 2e-05
EU549755_1(EU549755|pid:none) Ochotona hyperborea voucher UAM 80... 50 2e-05
EU549754_1(EU549754|pid:none) Ochotona hyperborea voucher UAM 23... 50 2e-05
EU549747_1(EU549747|pid:none) Ochotona collaris voucher UAM 3512... 50 2e-05
AP004442_10(AP004442|pid:none) Cottus reinii mitochondrial DNA, ... 50 2e-05
AF273115_1(AF273115|pid:none) Ochotona hyperborea NADH dehydroge... 50 2e-05
EU549748_1(EU549748|pid:none) Ochotona collaris voucher UAM 5769... 50 2e-05
AY251552_1(AY251552|pid:none) Etheostoma virgatum isolate EvirE ... 49 2e-05
AP008948_10(AP008948|pid:none) Oryzias latipes mitochondrial DNA... 49 2e-05
AJ554052_10(AJ554052|pid:none) Caperea marginata complete mitoch... 50 2e-05
AB096866_10(AB096866|pid:none) Chrysochloris asiatica mitochondr... 50 2e-05
AY398629_2(AY398629|pid:none) Caperea marginata voucher Z26572 N... 50 2e-05
AY960980_10(AY960980|pid:none) Choloepus didactylus mitochondrio... 50 2e-05
DQ534999_4(DQ534999|pid:none) Microcebus tavaratra isolate MATY5... 49 2e-05
DQ535001_4(DQ535001|pid:none) Microcebus tavaratra isolate MATY5... 49 2e-05
DQ534982_4(DQ534982|pid:none) Microcebus tavaratra isolate CAR5.... 49 2e-05
DQ534983_4(DQ534983|pid:none) Microcebus tavaratra isolate CAR5.... 49 2e-05
DQ534993_4(DQ534993|pid:none) Microcebus tavaratra isolate MATY5... 49 2e-05
AF061340_10(AF061340|pid:none) Artibeus jamaicensis mitochondria... 49 2e-05
FM177763_10(FM177763|pid:none) Melursus ursinus complete mitocho... 49 2e-05
AF190684_2(AF190684|pid:none) Elaphodus cephalophus NADH dehydro... 49 2e-05
EU327344_10(EU327344|pid:none) Ursus spelaeus mitochondrion, com... 49 2e-05
DQ873526_10(DQ873526|pid:none) Elaphodus cephalophus mitochondri... 49 2e-05
AM711900_10(AM711900|pid:none) Meles meles complete mitochondria... 49 2e-05
AF224522_4(AF224522|pid:none) Eulemur coronatus isolate JP33 cyt... 49 2e-05
AB099483_10(AB099483|pid:none) Urotrichus talpoides mitochondria... 49 2e-05
AF224631_4(AF224631|pid:none) Microcebus ravelobensis isolate JP... 49 2e-05
AF224523_4(AF224523|pid:none) Eulemur coronatus isolate JP34 cyt... 49 2e-05
AY598559_1(AY598559|pid:none) Lontra canadensis NADH dehydrogena... 48 2e-05
AY582596_4(AY582596|pid:none) Lepilemur seali isolate RANO234 cy... 48 2e-05
DQ856053_4(DQ856053|pid:none) Avahi laniger isolate RANO319B cyt... 48 2e-05
DQ316067_10(DQ316067|pid:none) Mammuthus primigenius mitochondri... 49 2e-05
(Q38PR3) RecName: Full=NADH-ubiquinone oxidoreductase chain 4; ... 49 2e-05
EU237479_7(EU237479|pid:none) Cinachyrella kuekenthali mitochond... 51 2e-05
EF633601_7(EF633601|pid:none) Seriatopora caliendrum mitochondri... 51 2e-05
AP010880_10(AP010880|pid:none) Procetichthys kreffti mitochondri... 51 2e-05
EU136032_10(EU136032|pid:none) Acanthurus leucosternon mitochond... 51 2e-05
AF224587_4(AF224587|pid:none) Varecia variegata variegata isolat... 51 2e-05
DQ643832_7(DQ643832|pid:none) Astrangia sp. JVK-2006 mitochondri... 51 2e-05
EU237482_5(EU237482|pid:none) Topsentia ophiraphidites mitochond... 51 2e-05
EU237477_12(EU237477|pid:none) Callyspongia plicifera mitochondr... 51 2e-05
AY582555_4(AY582555|pid:none) Varecia variegata variegata isolat... 51 2e-05
CP000489_2207(CP000489|pid:none) Paracoccus denitrificans PD1222... 44 3e-05
CP000738_897(CP000738|pid:none) Sinorhizobium medicae WSM419, co... 42 3e-05
AL591688_1283(AL591688|pid:none) Sinorhizobium meliloti 1021 com... 42 3e-05
CP000675_2950(CP000675|pid:none) Legionella pneumophila str. Cor... 46 3e-05
AE017354_2719(AE017354|pid:none) Legionella pneumophila subsp. p... 46 3e-05
CP000524_743(CP000524|pid:none) Bartonella bacilliformis KC583, ... 42 3e-05
AM260479_1051(AM260479|pid:none) Ralstonia eutropha H16 chromoso... 41 3e-05
AP004437_10(AP004437|pid:none) Hypoptychus dybowskii mitochondri... 50 3e-05
AP009505_10(AP009505|pid:none) Etroplus maculatus mitochondrial ... 49 3e-05
AP004431_10(AP004431|pid:none) Ostichthys japonicus mitochondria... 49 3e-05
AY251546_1(AY251546|pid:none) Etheostoma squamiceps isolate Esqu... 49 3e-05
AF273116_1(AF273116|pid:none) Ochotona koslowi NADH dehydrogenas... 49 3e-05
>DQ336395_1(DQ336395|pid:none) Dictyostelium citrinum mitochondrion,
complete genome.
Length = 536
Score = 154 bits (389), Expect = 2e-36
Identities = 99/197 (50%), Positives = 117/197 (59%), Gaps = 6/197 (3%)
Frame = -1
Query: 573 AISIMNXXXXXXXXXXXLRKKIMPNQKFQRIFILGVQGILIVLSGIMLIGCEGTDIINRI 394
AI IMN L KIMP Q+ QRIF+LG+Q IL+VLSG+MLIG EG+DIIN+I
Sbjct: 5 AIKIMNIVIGGGILGVILMNKIMPKQETQRIFLLGIQVILLVLSGVMLIGFEGSDIINKI 64
Query: 393 SPYINMVTVYSNNVNINIGYSIDGISAXXXXXXXXXXXXXXXXXIRVIKEKTEQKSSNNV 214
SPYI+MVTVYSNN NINIGY++DGISA +RVIKEK E++ +
Sbjct: 65 SPYISMVTVYSNNANINIGYNVDGISAIFIVLTIVLILSCILISLRVIKEKQEKQFHIML 124
Query: 213 IINSKY***TFLQQQI*CNYISY------MKQP*SQW****EYGAQEPKKKIAAFQILIY 52
+I F + YI Y M W +KKIAAFQILIY
Sbjct: 125 LITEILIINFFAATDLVQLYIVYEASLIPMVIMIGVW-------GSRTEKKIAAFQILIY 177
Query: 51 TLIGSIFMLMSIGILYS 1
TLIGSIFMLMSIG+LYS
Sbjct: 178 TLIGSIFMLMSIGLLYS 194
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 580,177,401
Number of extensions: 9465697
Number of successful extensions: 43221
Number of sequences better than 10.0: 2515
Number of HSP's gapped: 41819
Number of HSP's successfully gapped: 3648
Length of query: 191
Length of database: 1,040,966,779
Length adjustment: 121
Effective length of query: 70
Effective length of database: 653,248,294
Effective search space: 45727380580
Effective search space used: 45727380580
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
|
| PSORT |
|
| VS (DIR, S) |
1 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
2 |
| FC-IC (SUB) |
2 |