Contig-U08330-1
Contig ID Contig-U08330-1
Contig update 2002. 9.13
Contig sequence
>Contig-U08330-1 (Contig-U08330-1Q) /CSM_Contig/Contig-U08330-1Q.Seq.d
GACAATTTAGCGAAAATCAACAAATACATTTCAAAATAATAAAAATAAAA
AAAATGAGTGGATACGTTGGAAACCTTTCACCAGAACAAGAACATCAATT
AGGTATTATTAAATCTAAAATTGCAGAAATTAATGATCCAGTTGTAGAAA
AAGAAATTCAACAATTAGATGATTCTATGACCTTAAGATTTTTAAGAGCT
AGAAAATGGAATCTAAAAGATTCATTTGATATGCTCTATGAAGCATTAAA
ATTCCGAGCAACATTTCAAGATGTTGGAGTTGAAGGTATAACAGAATCAA
TGGTTGTTAATGAATTAAAGAGTGGTAAGAGTTATTTCCATGGTGTTGAT
AAAGGTGGTAGACCAGTTTGTATTGTTAAAACCAGTAGACATGATAGTTA
CAACAGAGATTTGAATGAATCGATGAGATATTGTGTCTACGTAATGGAAA
ATGGTAAATCAATGTTAAAGGACGGTATTGAAACTTGTACACTTATTTTC
GATATGTCTGATTTTAGTTCAAAAAATATGGATTATCCATTGGTTAAATT
TATGGTTGAATTATTTCAAAAGTTTTATCCAGAATCATTACAAAAATGTT
TAATTTTAAATGCACCTTGGATCTTTATGGGAATTTGGCATATCATCAAA
CATTGGTTAGATCCAAATACCGCTTCAAAAGTTTCTTTTGTCAAAACTAA
ACAATTGGTTGATTATATTCCAAAAGATCAATTAGAAAGTTCTTATGGTG
GAACAAGTACATTTAAATATACTTATGAGGGAAAAGAAGTAAAGTAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAATATTTACTTTTAAAATATATAAATT
GTAATAACAACAAGAACAACAACAATAACAATAACAATAATAATTTCAAA
ACCAAAAAAAAACTTTATCCTTCAATTACCGAAATCTCCACTTTTAATTA
TTTTTTTTTTTGTTTAAAAAAAATAAATAAATAAATAAATGTATATATAA
TTTCTTAAA

Gap no gap
Contig length 1009
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 6190706
End point 6191715
Strand (PLUS/MINUS) PLUS
Number of clones 8
Number of EST 6
Link to clone list U08330
List of clone(s)

est1=SSE832E,1,854
est2=VSD357E,4,788
est3=SSB584Z,313,811
est4=FC-IC0335E,489,758
est5=FC-IC0515Z,489,758
est6=SSJ189E,530,1010
Translated Amino Acid sequence
QFSENQQIHFKIIKIKKMSGYVGNLSPEQEHQLGIIKSKIAEINDPVVEKEIQQLDDSMT
LRFLRARKWNLKDSFDMLYEALKFRATFQDVGVEGITESMVVNELKSGKSYFHGVDKGGR
PVCIVKTSRHDSYNRDLNESMRYCVYVMENGKSMLKDGIETCTLIFDMSDFSSKNMDYPL
VKFMVELFQKFYPESLQKCLILNAPWIFMGIWHIIKHWLDPNTASKVSFVKTKQLVDYIP
KDQLESSYGGTSTFKYTYEGKEVK*kkkkkkkkkiftfkiykl**qqeqqq*q*q**fqn
qkktlsfnyrnlhf*lffflfkknk*inkciynfl


Translated Amino Acid sequence (All Frames)
Frame A:
dnlakinkyisk**k*kk*vdtletfhqnknin*vllnlklqklmiql*kkkfnn*mil*
p*df*elengi*kihlicsmkh*nseqhfkmlelkv*qnqwllmn*rvvrvismvlikvv
dqfvllkpvdmivttei*mnr*divst*wkmvnqc*rtvlklvhlfsiclilvqkiwiih
wlnlwlnyfksfiqnhyknv*f*mhlgslwefgissnig*iqiplqkfllsklnnwliif
qkin*kvlmveqvhlnilmrekk*skkkkkkkkkkylllkyincnnnknnnnnnnnnnfk
tkkklypsiteistfnyfffclkkink*invyiis*


Frame B:
ti*rkstntfqnnknkknewirwkpftrtrtsiryy*i*ncrn**sscrkrnstir*fyd
lkifks*kmeskrfi*yal*sikipsnisrcws*rynringc**ikew*elfpwc**rw*
tslyc*nq*t**lqqrfe*ideilclrngkw*invkgry*nlytyfryv*f*fkkyglsi
g*iyg*iiskvlsriitkmfnfkctldlygnlayhqtlvrskyrfksffcqn*tig*lys
krsirkflwwnkyi*iyl*gkrskvkkkkkkkkkniyf*ni*ivittrtttititiiisk
pkknfilqlpksplliifffv*kk*ink*myi*flk


Frame C:
QFSENQQIHFKIIKIKKMSGYVGNLSPEQEHQLGIIKSKIAEINDPVVEKEIQQLDDSMT
LRFLRARKWNLKDSFDMLYEALKFRATFQDVGVEGITESMVVNELKSGKSYFHGVDKGGR
PVCIVKTSRHDSYNRDLNESMRYCVYVMENGKSMLKDGIETCTLIFDMSDFSSKNMDYPL
VKFMVELFQKFYPESLQKCLILNAPWIFMGIWHIIKHWLDPNTASKVSFVKTKQLVDYIP
KDQLESSYGGTSTFKYTYEGKEVK*kkkkkkkkkiftfkiykl**qqeqqq*q*q**fqn
qkktlsfnyrnlhf*lffflfkknk*inkciynfl


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U08330-1 (Contig-U08330-1Q)
/CSM_Contig/Contig-U08330-1Q.Seq.d
(1009 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U08330-1 (Contig-U08330-1Q) /CSM_Contig/Conti... 1469 0.0
Contig-U14683-1 (Contig-U14683-1Q) /CSM_Contig/Conti... 68 2e-11
Contig-U09174-1 (Contig-U09174-1Q) /CSM_Contig/Conti... 68 2e-11
Contig-U11815-1 (Contig-U11815-1Q) /CSM_Contig/Conti... 62 1e-09
Contig-U14435-1 (Contig-U14435-1Q) /CSM_Contig/Conti... 56 8e-08
Contig-U12846-1 (Contig-U12846-1Q) /CSM_Contig/Conti... 56 8e-08
Contig-U10968-1 (Contig-U10968-1Q) /CSM_Contig/Conti... 56 8e-08
Contig-U13900-1 (Contig-U13900-1Q) /CSM_Contig/Conti... 54 3e-07
Contig-U12176-1 (Contig-U12176-1Q) /CSM_Contig/Conti... 54 3e-07
Contig-U11436-1 (Contig-U11436-1Q) /CSM_Contig/Conti... 54 3e-07

>Contig-U08330-1 (Contig-U08330-1Q) /CSM_Contig/Contig-U08330-1Q.Seq.d
Length = 1009

Score = 1469 bits (741), Expect = 0.0
Identities = 741/741 (100%)
Strand = Plus / Plus


Query: 55 tgagtggatacgttggaaacctttcaccagaacaagaacatcaattaggtattattaaat 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 tgagtggatacgttggaaacctttcaccagaacaagaacatcaattaggtattattaaat 114


Query: 115 ctaaaattgcagaaattaatgatccagttgtagaaaaagaaattcaacaattagatgatt 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 ctaaaattgcagaaattaatgatccagttgtagaaaaagaaattcaacaattagatgatt 174


Query: 175 ctatgaccttaagatttttaagagctagaaaatggaatctaaaagattcatttgatatgc 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 ctatgaccttaagatttttaagagctagaaaatggaatctaaaagattcatttgatatgc 234


Query: 235 tctatgaagcattaaaattccgagcaacatttcaagatgttggagttgaaggtataacag 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tctatgaagcattaaaattccgagcaacatttcaagatgttggagttgaaggtataacag 294


Query: 295 aatcaatggttgttaatgaattaaagagtggtaagagttatttccatggtgttgataaag 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 aatcaatggttgttaatgaattaaagagtggtaagagttatttccatggtgttgataaag 354


Query: 355 gtggtagaccagtttgtattgttaaaaccagtagacatgatagttacaacagagatttga 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gtggtagaccagtttgtattgttaaaaccagtagacatgatagttacaacagagatttga 414


Query: 415 atgaatcgatgagatattgtgtctacgtaatggaaaatggtaaatcaatgttaaaggacg 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 atgaatcgatgagatattgtgtctacgtaatggaaaatggtaaatcaatgttaaaggacg 474


Query: 475 gtattgaaacttgtacacttattttcgatatgtctgattttagttcaaaaaatatggatt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gtattgaaacttgtacacttattttcgatatgtctgattttagttcaaaaaatatggatt 534


Query: 535 atccattggttaaatttatggttgaattatttcaaaagttttatccagaatcattacaaa 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 atccattggttaaatttatggttgaattatttcaaaagttttatccagaatcattacaaa 594


Query: 595 aatgtttaattttaaatgcaccttggatctttatgggaatttggcatatcatcaaacatt 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 aatgtttaattttaaatgcaccttggatctttatgggaatttggcatatcatcaaacatt 654


Query: 655 ggttagatccaaataccgcttcaaaagtttcttttgtcaaaactaaacaattggttgatt 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ggttagatccaaataccgcttcaaaagtttcttttgtcaaaactaaacaattggttgatt 714


Query: 715 atattccaaaagatcaattagaaagttcttatggtggaacaagtacatttaaatatactt 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 atattccaaaagatcaattagaaagttcttatggtggaacaagtacatttaaatatactt 774


Query: 775 atgagggaaaagaagtaaagt 795
|||||||||||||||||||||
Sbjct: 775 atgagggaaaagaagtaaagt 795


Score = 194 bits (98), Expect = 1e-49
Identities = 116/125 (92%)
Strand = Plus / Plus


Query: 826 tatttacttttaaaatatataaattgtaataacaacaagaacaacaacaataacaataac 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 tatttacttttaaaatatataaattgtaataacaacaagaacaacaacaataacaataac 885


Query: 886 aataataatttcaaaaccnnnnnnnnnctttatccttcaattaccgaaatctccactttt 945
|||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 886 aataataatttcaaaaccaaaaaaaaactttatccttcaattaccgaaatctccactttt 945


Query: 946 aatta 950
|||||
Sbjct: 946 aatta 950


Score = 63.9 bits (32), Expect = 3e-10
Identities = 32/32 (100%)
Strand = Plus / Plus


Query: 1 gacaatttagcgaaaatcaacaaatacatttc 32
||||||||||||||||||||||||||||||||
Sbjct: 1 gacaatttagcgaaaatcaacaaatacatttc 32


Score = 40.1 bits (20), Expect = 0.005
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 990 tgtatatataatttcttaaa 1009
||||||||||||||||||||
Sbjct: 990 tgtatatataatttcttaaa 1009


>Contig-U14683-1 (Contig-U14683-1Q) /CSM_Contig/Contig-U14683-1Q.Seq.d
Length = 1536

Score = 67.9 bits (34), Expect = 2e-11
Identities = 37/38 (97%)
Strand = Plus / Plus


Query: 856 aacaacaagaacaacaacaataacaataacaataataa 893
|||||||| |||||||||||||||||||||||||||||
Sbjct: 232 aacaacaacaacaacaacaataacaataacaataataa 269


Score = 48.1 bits (24), Expect = 2e-05
Identities = 30/32 (93%)
Strand = Plus / Plus


Query: 859 aacaagaacaacaacaataacaataacaataa 890
||||| ||||||||||| ||||||||||||||
Sbjct: 229 aacaacaacaacaacaacaacaataacaataa 260


Score = 44.1 bits (22), Expect = 3e-04
Identities = 34/38 (89%)
Strand = Plus / Plus


Query: 856 aacaacaagaacaacaacaataacaataacaataataa 893
|||||||| ||||| |||||||||||||| || |||||
Sbjct: 238 aacaacaacaacaataacaataacaataataacaataa 275


Score = 34.2 bits (17), Expect = 0.28
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 868 aacaacaataacaataacaat 888
||||| |||||||||||||||
Sbjct: 259 aacaataataacaataacaat 279


>Contig-U09174-1 (Contig-U09174-1Q) /CSM_Contig/Contig-U09174-1Q.Seq.d
Length = 498

Score = 67.9 bits (34), Expect = 2e-11
Identities = 37/38 (97%)
Strand = Plus / Plus


Query: 856 aacaacaagaacaacaacaataacaataacaataataa 893
|||||||| |||||||||||||||||||||||||||||
Sbjct: 41 aacaacaacaacaacaacaataacaataacaataataa 78


Score = 54.0 bits (27), Expect = 3e-07
Identities = 33/35 (94%)
Strand = Plus / Plus


Query: 856 aacaacaagaacaacaacaataacaataacaataa 890
|||||||| ||||||||||| ||||||||||||||
Sbjct: 35 aacaacaacaacaacaacaacaacaataacaataa 69


Score = 34.2 bits (17), Expect = 0.28
Identities = 26/29 (89%)
Strand = Plus / Plus


Query: 865 aacaacaacaataacaataacaataataa 893
||||||||||| ||||| ||||| |||||
Sbjct: 35 aacaacaacaacaacaacaacaacaataa 63


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 23,362
Number of Sequences: 6905
Number of extensions: 23362
Number of successful extensions: 7100
Number of sequences better than 10.0: 1055
length of query: 1009
length of database: 5,674,871
effective HSP length: 16
effective length of query: 993
effective length of database: 5,564,391
effective search space: 5525440263
effective search space used: 5525440263
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.13
Homology vs DNA
Query= Contig-U08330-1 (Contig-U08330-1Q) /CSM_Contig/Contig-U08330-1Q.Seq.d
(1009 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU263899) Dictyostelium discoideum vegetative cDNA clone:VS... 1340 0.0 2
(AC117082) Dictyostelium discoideum chromosome 2 map complem... 1201 0.0 1
(AU263898) Dictyostelium discoideum vegetative cDNA clone:VS... 961 0.0 2
(AU037187) Dictyostelium discoideum slug cDNA, clone SSB584. 944 0.0 1
(C84903) Dictyostelium discoideum slug cDNA, clone SSE832. 571 e-158 1
(AU271663) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 535 e-147 1
(AU271525) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 535 e-147 1
(AU271524) Dictyostelium discoideum gamete cDNA clone:FC-IC0... 535 e-147 1
(C90823) Dictyostelium discoideum slug cDNA, clone SSJ189. 402 e-122 2
(AU072546) Dictyostelium discoideum slug cDNA, clone SSE832. 369 e-110 2
(EJ453955) 1093015491156 Global-Ocean-Sampling_GS-28-01-01-1... 48 6e-04 2
(AM285302) Spiroplasma citri GII3-3X chromosome, contig Cont... 44 0.009 6
(EJ499612) 1095403608504 Global-Ocean-Sampling_GS-28-01-01-1... 42 0.034 2
(ER350101) 1092346001687 Global-Ocean-Sampling_GS-34-01-01-1... 40 0.12 2
(EJ806096) 1093017459962 Global-Ocean-Sampling_GS-30-02-01-1... 40 0.13 2
(EJ147938) 1092343732205 Global-Ocean-Sampling_GS-27-01-01-1... 40 0.13 2
(EJ409130) 1093012122601 Global-Ocean-Sampling_GS-28-01-01-1... 40 0.13 2
(EJ805764) 1093017458810 Global-Ocean-Sampling_GS-30-02-01-1... 40 0.13 2
(AC225532) Medicago truncatula clone mth2-105l11, WORKING DR... 50 0.16 1
(AC225474) Medicago truncatula clone mth2-189l10, WORKING DR... 50 0.16 1
(AC225463) Medicago truncatula clone mth2-170h21, WORKING DR... 50 0.16 1
(ER463176) 1092963907061 Global-Ocean-Sampling_GS-35-01-01-1... 38 0.47 2
(BX927113) Zebrafish DNA sequence from clone DKEY-5N1 in lin... 46 2.6 1
(BX324138) Zebrafish DNA sequence from clone CH211-127F10 in... 46 2.6 1
(AP002517) Homo sapiens genomic DNA, chromosome 11q clone:RP... 46 2.6 1
(AP002512) Homo sapiens genomic DNA, chromosome 11q clone:CT... 46 2.6 1
(AP001099) Homo sapiens genomic DNA, chromosome 18 clone:RP1... 46 2.6 1
(AC100954) Mus musculus clone RP23-73P20, LOW-PASS SEQUENCE ... 46 2.6 1
(AP002009) Homo sapiens genomic DNA, chromosome 11q13 clone:... 46 2.6 1
(AP001911) Homo sapiens genomic DNA, chromosome 18p11.3 clon... 46 2.6 1
(AP001283) Homo sapiens genomic DNA, chromosome 18p11.2 clon... 46 2.6 1
(AP001112) Homo sapiens genomic DNA, chromosome 11q12 clone:... 46 2.6 1
(AC196692) Gallus gallus chromosome UNKNOWN clone CH261-172L... 46 2.6 1
(AC018746) Homo sapiens clone H_NH0404F04, WORKING DRAFT SEQ... 46 2.6 1
(AC015677) Homo sapiens chromosome 18 clone RP11-205G20 map ... 46 2.6 1
(ET010925) MUGQ_CH252P313C04T7_CP569_014 CHORI-252 Vervet Mo... 46 2.6 1
(ED561939) MUGQ_CH252P142J05Sp6_CN145_023 CHORI-252 Vervet M... 46 2.6 1
(CN409534) 17000583182053 GRN_PRENEU Homo sapiens cDNA 5', m... 46 2.6 1
(BU656121) cl06g02.z1 Hembase; Erythroid Precursor Cells (LC... 46 2.6 1
(BU656042) cl05g02.z1 Hembase; Erythroid Precursor Cells (LC... 46 2.6 1
(AC214536) Zea mays chromosome 5 clone CH201-151O21; ZMMBBc0... 34 4.8 2
(AM285308) Spiroplasma citri GII3-3X chromosome, contig Cont... 44 4.8 2
(AC224728) Bos taurus clone CH240-478C12, WORKING DRAFT SEQU... 38 4.8 6
(AC073573) Homo sapiens 12 BAC RP11-1136G11 (Roswell Park Ca... 40 5.0 2
(ER330525) 1092344254294 Global-Ocean-Sampling_GS-34-01-01-1... 34 6.5 2
(EK330087) 1095467020850 Global-Ocean-Sampling_GS-31-01-01-1... 34 6.5 2
(EJ414192) 1093012169993 Global-Ocean-Sampling_GS-28-01-01-1... 34 6.5 2
(CF315824) HD--04-O04.g1 OsHDAC1-overexpressing transgenic r... 32 6.8 2
(AC025133) Homo sapiens chromosome 8, clone RP11-227F6, comp... 36 9.1 5

>(AU263899) Dictyostelium discoideum vegetative cDNA clone:VSD357,
3' end single read.
Length = 713

Score = 1340 bits (676), Expect(2) = 0.0
Identities = 676/676 (100%)
Strand = Plus / Plus


Query: 73 acctttcaccagaacaagaacatcaattaggtattattaaatctaaaattgcagaaatta 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctttcaccagaacaagaacatcaattaggtattattaaatctaaaattgcagaaatta 60


Query: 133 atgatccagttgtagaaaaagaaattcaacaattagatgattctatgaccttaagatttt 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgatccagttgtagaaaaagaaattcaacaattagatgattctatgaccttaagatttt 120


Query: 193 taagagctagaaaatggaatctaaaagattcatttgatatgctctatgaagcattaaaat 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taagagctagaaaatggaatctaaaagattcatttgatatgctctatgaagcattaaaat 180


Query: 253 tccgagcaacatttcaagatgttggagttgaaggtataacagaatcaatggttgttaatg 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccgagcaacatttcaagatgttggagttgaaggtataacagaatcaatggttgttaatg 240


Query: 313 aattaaagagtggtaagagttatttccatggtgttgataaaggtggtagaccagtttgta 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aattaaagagtggtaagagttatttccatggtgttgataaaggtggtagaccagtttgta 300


Query: 373 ttgttaaaaccagtagacatgatagttacaacagagatttgaatgaatcgatgagatatt 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgttaaaaccagtagacatgatagttacaacagagatttgaatgaatcgatgagatatt 360


Query: 433 gtgtctacgtaatggaaaatggtaaatcaatgttaaaggacggtattgaaacttgtacac 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtgtctacgtaatggaaaatggtaaatcaatgttaaaggacggtattgaaacttgtacac 420


Query: 493 ttattttcgatatgtctgattttagttcaaaaaatatggattatccattggttaaattta 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttattttcgatatgtctgattttagttcaaaaaatatggattatccattggttaaattta 480


Query: 553 tggttgaattatttcaaaagttttatccagaatcattacaaaaatgtttaattttaaatg 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tggttgaattatttcaaaagttttatccagaatcattacaaaaatgtttaattttaaatg 540


Query: 613 caccttggatctttatgggaatttggcatatcatcaaacattggttagatccaaataccg 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caccttggatctttatgggaatttggcatatcatcaaacattggttagatccaaataccg 600


Query: 673 cttcaaaagtttcttttgtcaaaactaaacaattggttgattatattccaaaagatcaat 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cttcaaaagtttcttttgtcaaaactaaacaattggttgattatattccaaaagatcaat 660


Query: 733 tagaaagttcttatgg 748
||||||||||||||||
Sbjct: 661 tagaaagttcttatgg 676

Score = 50.1 bits (25), Expect(2) = 0.0
Identities = 25/25 (100%)
Strand = Plus / Plus


Query: 751 gaacaagtacatttaaatatactta 775
|||||||||||||||||||||||||
Sbjct: 678 gaacaagtacatttaaatatactta 702

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,011,861,109
Number of extensions: 60621727
Number of successful extensions: 4762292
Number of sequences better than 10.0: 49
Length of query: 1009
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 985
Effective length of database: 97,308,875,965
Effective search space: 95849242825525
Effective search space used: 95849242825525
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.24
Homology vs Protein
Query= Contig-U08330-1 (Contig-U08330-1Q) /CSM_Contig/Contig-U08330-1Q.Seq.d
(1009 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AM270115_50(AM270115|pid:none) Aspergillus niger contig An06c009... 170 8e-41
(Q10138) RecName: Full=CRAL-TRIO domain-containing protein C3H8.... 166 9e-40
CR382129_654(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 154 5e-36
AM920431_638(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 152 2e-35
CR382129_199(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 149 1e-34
CR382125_231(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 148 3e-34
AM269993_6(AM269993|pid:none) Aspergillus niger contig An01c0470... 144 6e-33
CU928168_586(CU928168|pid:none) Kluyveromyces thermotolerans str... 140 5e-32
CR382133_199(CR382133|pid:none) Debaryomyces hansenii strain CBS... 135 2e-30
CU633865_82(CU633865|pid:none) Podospora anserina genomic DNA ch... 132 2e-29
CU928174_505(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 131 3e-29
AM456511_6(AM456511|pid:none) Vitis vinifera contig VV78X130314.... 119 1e-25
BC081354_1(BC081354|pid:none) Xenopus tropicalis mospd2 protein,... 116 1e-24
BT045370_1(BT045370|pid:none) Salmo salar clone ssal-rgf-519-226... 112 2e-23
BC085670_1(BC085670|pid:none) Danio rerio motile sperm domain co... 112 3e-23
BT052780_1(BT052780|pid:none) Medicago truncatula clone MTYFH_FI... 111 3e-23
AF024652_1(AF024652|pid:none) Glycine max polyphosphoinositide b... 110 8e-23
(Q9HDZ5) RecName: Full=CRAL-TRIO domain-containing protein C589.... 109 1e-22
AC002983_1(AC002983|pid:none) Arabidopsis thaliana BAC T3F12 fro... 108 3e-22
CR382127_265(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 108 4e-22
(Q9UU99) RecName: Full=CRAL-TRIO domain-containing protein C23B6... 107 5e-22
AP003262_19(AP003262|pid:none) Oryza sativa Japonica Group genom... 107 5e-22
DQ294263_1(DQ294263|pid:none) Solanum tuberosum clone 130H05 tra... 107 6e-22
CS560332_1(CS560332|pid:none) Sequence 919 from Patent WO2006032... 107 8e-22
(P53860) RecName: Full=Phosphatidylinositol transfer protein PDR... 106 1e-21
AC009273_1(AC009273|pid:none) Sequence of BAC T1N6 from Arabidop... 105 2e-21
AC147964_22(AC147964|pid:none) Medicago truncatula clone mth2-5i... 105 2e-21
AL670005_1(AL670005|pid:none) Neurospora crassa DNA linkage grou... 103 1e-20
U88068_1(U88068|pid:none) Oryza sativa sec14 like protein mRNA, ... 102 2e-20
AC096688_9(AC096688|pid:none) Oryza sativa chromosome 3 BAC OSJN... 102 2e-20
AE014296_572(AE014296|pid:none) Drosophila melanogaster chromoso... 102 2e-20
BT063722_1(BT063722|pid:none) Zea mays full-length cDNA clone ZM... 102 3e-20
EU966267_1(EU966267|pid:none) Zea mays clone 292994 phosphatidyl... 102 3e-20
CR380956_314(CR380956|pid:none) Candida glabrata strain CBS138 c... 101 4e-20
CP000584_242(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 100 6e-20
(Q9CWP6) RecName: Full=Motile sperm domain-containing protein 2; 100 1e-19
AK031405_1(AK031405|pid:none) Mus musculus 13 days embryo male t... 100 1e-19
AK010480_1(AK010480|pid:none) Mus musculus ES cells cDNA, RIKEN ... 100 1e-19
CU640366_673(CU640366|pid:none) Podospora anserina genomic DNA c... 99 2e-19
AC073942_9(AC073942|pid:none) Sequence of BAC F16L1 from Arabido... 99 2e-19
AK317186_1(AK317186|pid:none) Arabidopsis thaliana AT1G22180 mRN... 99 2e-19
AK117699_1(AK117699|pid:none) Arabidopsis thaliana At4g36640 mRN... 99 3e-19
AL161589_41(AL161589|pid:none) Arabidopsis thaliana DNA chromoso... 99 3e-19
EU966771_1(EU966771|pid:none) Zea mays clone 297267 polyphosphoi... 99 3e-19
AM270326_14(AM270326|pid:none) Aspergillus niger contig An14c019... 98 4e-19
EF082181_1(EF082181|pid:none) Picea sitchensis clone WS0296_G07 ... 97 9e-19
FM992692_49(FM992692|pid:none) Candida dubliniensis CD36 chromos... 97 9e-19
BT052212_1(BT052212|pid:none) Medicago truncatula clone MTYF9_FA... 97 9e-19
BT001638_1(BT001638|pid:none) Drosophila melanogaster RE40017 fu... 97 9e-19
AP001080_6(AP001080|pid:none) Oryza sativa Japonica Group genomi... 97 1e-18
BX908789_19(BX908789|pid:none) Neurospora crassa DNA linkage gro... 96 1e-18
(Q9UUC2) RecName: Full=CRAL-TRIO domain-containing protein C365.... 96 1e-18
FJ502061_1(FJ502061|pid:none) Aristichthys nobilis clone A166 mo... 96 2e-18
EF086712_1(EF086712|pid:none) Picea sitchensis clone WS02744_N15... 96 2e-18
AP007166_361(AP007166|pid:none) Aspergillus oryzae RIB40 genomic... 96 3e-18
AE016815_13(AE016815|pid:none) Ashbya gossypii (= Eremothecium g... 95 3e-18
S57923(S57923;S72193)SEC14 protein - yeast (Candida albicans) 95 3e-18
L20972_1(L20972|pid:none) Yarrowia lipolytica phosphatidylinosit... 95 3e-18
(P33324) RecName: Full=CRAL-TRIO domain-containing protein YKL09... 95 4e-18
AK093075_1(AK093075|pid:none) Homo sapiens cDNA FLJ35756 fis, cl... 94 7e-18
CR382139_166(CR382139|pid:none) Debaryomyces hansenii strain CBS... 94 7e-18
AM270365_19(AM270365|pid:none) Aspergillus niger contig An16c013... 93 1e-17
U82515_1(U82515|pid:none) Dictyostelium discoideum random slug c... 93 1e-17
AC137997_10(AC137997|pid:none) Oryza sativa chromosome 3 BAC OJ1... 93 1e-17
AC145330_12(AC145330|pid:none) Medicago truncatula clone mth2-17... 93 1e-17
(Q55CU8) RecName: Full=Random slug protein 5; AltName: Full=CRAL... 93 1e-17
CU928170_107(CU928170|pid:none) Kluyveromyces thermotolerans str... 91 5e-17
AM920427_1560(AM920427|pid:none) Penicillium chrysogenum Wiscons... 91 8e-17
BT042771_1(BT042771|pid:none) Zea mays full-length cDNA clone ZM... 91 8e-17
(P53844) RecName: Full=Phosphatidylinositol transfer protein PDR... 90 1e-16
BT066776_1(BT066776|pid:none) Zea mays full-length cDNA clone ZM... 90 1e-16
EU961303_1(EU961303|pid:none) Zea mays clone 234429 hypothetical... 90 1e-16
CR380956_448(CR380956|pid:none) Candida glabrata strain CBS138 c... 90 1e-16
AF487977_1(AF487977|pid:none) Bos taurus tocopherol-associated p... 89 2e-16
CP000501_287(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 89 2e-16
CR380956_344(CR380956|pid:none) Candida glabrata strain CBS138 c... 89 2e-16
(P58875) RecName: Full=SEC14-like protein 2; AltName: Full=Alpha... 89 2e-16
BT054564_1(BT054564|pid:none) Zea mays full-length cDNA clone ZM... 89 2e-16
AY080700_1(AY080700|pid:none) Arabidopsis thaliana putative poly... 89 3e-16
AB267828_1(AB267828|pid:none) Ipomoea nil In32 mRNA for SEC14 cy... 89 3e-16
AE016819_894(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 87 7e-16
BC129611_1(BC129611|pid:none) Xenopus laevis hypothetical protei... 87 7e-16
BT069222_1(BT069222|pid:none) Zea mays full-length cDNA clone ZM... 87 9e-16
FB910585_1(FB910585|pid:none) Sequence 129858 from Patent WO2008... 87 1e-15
AC121244_13(AC121244|pid:none) Medicago truncatula clone mth2-31... 87 1e-15
CU928178_662(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 86 2e-15
FN392322_593(FN392322|pid:none) Pichia pastoris GS115 chromosome... 86 2e-15
(Q10137) RecName: Full=Sec14 cytosolic factor; AltName: Full=Pho... 86 2e-15
A37766(A37766)SEC14 protein - yeast (Kluyveromyces marxianus var... 86 2e-15
AP009565_7(AP009565|pid:none) Lotus japonicus genomic DNA, chrom... 85 3e-15
AC118285_12(AC118285|pid:none) Oryza sativa (japonica cultivar-g... 84 6e-15
FB910591_1(FB910591|pid:none) Sequence 129864 from Patent WO2008... 84 6e-15
AM989981_9(AM989981|pid:none) Zygosaccharomyces rouxii strain CB... 84 8e-15
FB910575_1(FB910575|pid:none) Sequence 129848 from Patent WO2008... 84 8e-15
FM992688_352(FM992688|pid:none) Candida dubliniensis CD36 chromo... 84 8e-15
(Q29JQ0) RecName: Full=Protein real-time; 84 8e-15
AP003245_2(AP003245|pid:none) Oryza sativa Japonica Group genomi... 84 8e-15
(Q99J08) RecName: Full=SEC14-like protein 2; AltName: Full=Alpha... 84 1e-14
BT054791_1(BT054791|pid:none) Zea mays full-length cDNA clone ZM... 84 1e-14
AC007047_11(AC007047|pid:none) Arabidopsis thaliana chromosome 2... 84 1e-14
BX537448_1(BX537448|pid:none) Homo sapiens mRNA; cDNA DKFZp686C0... 84 1e-14
AB008265_2(AB008265|pid:none) Arabidopsis thaliana genomic DNA, ... 83 1e-14
AC140722_2(AC140722|pid:none) Medicago truncatula clone mth2-14e... 83 1e-14
U32305_16(U32305|pid:none) Caenorhabditis elegans cosmid B0336, ... 83 2e-14
AC125480_15(AC125480|pid:none) Medicago truncatula clone mth2-8c... 83 2e-14
AB168180_1(AB168180|pid:none) Macaca fascicularis testis cDNA cl... 83 2e-14
AB208811_1(AB208811|pid:none) Homo sapiens mRNA for Hypothetical... 83 2e-14
CR382137_523(CR382137|pid:none) Debaryomyces hansenii strain CBS... 83 2e-14
AK293206_1(AK293206|pid:none) Homo sapiens cDNA FLJ59456 complet... 83 2e-14
AP004553_10(AP004553|pid:none) Oryza sativa Japonica Group genom... 83 2e-14
AK317365_1(AK317365|pid:none) Arabidopsis thaliana AT4G36640 mRN... 83 2e-14
AB173616_1(AB173616|pid:none) Macaca fascicularis brain cDNA clo... 83 2e-14
AM393464_1(AM393464|pid:none) Synthetic construct Homo sapiens c... 82 2e-14
AK070235_1(AK070235|pid:none) Oryza sativa Japonica Group cDNA c... 82 2e-14
AK314390_1(AK314390|pid:none) Homo sapiens cDNA, FLJ95164, highl... 82 2e-14
CR857519_1(CR857519|pid:none) Pongo abelii mRNA; cDNA DKFZp459B2... 82 2e-14
FB910613_1(FB910613|pid:none) Sequence 129886 from Patent WO2008... 82 2e-14
AY510102_3(AY510102|pid:none) Melampsora lini AvrL567 avirulence... 82 3e-14
JC7708(JC7708)tocopherol associated protein - human 82 3e-14
BC143077_1(BC143077|pid:none) Synthetic construct Homo sapiens c... 82 3e-14
AB033012_1(AB033012|pid:none) Homo sapiens mRNA for KIAA1186 pro... 82 4e-14
(O76054) RecName: Full=SEC14-like protein 2; AltName: Full=Alpha... 82 4e-14
EU963581_1(EU963581|pid:none) Zea mays clone 264277 transporter-... 82 4e-14
BC058915_1(BC058915|pid:none) Homo sapiens SEC14-like 2 (S. cere... 82 4e-14
AC007212_4(AC007212|pid:none) Arabidopsis thaliana chromosome 2 ... 81 5e-14
FB910581_1(FB910581|pid:none) Sequence 129854 from Patent WO2008... 81 5e-14
CR940348_180(CR940348|pid:none) Theileria annulata strain Ankara... 81 6e-14
AK172947_1(AK172947|pid:none) Mus musculus mRNA for mKIAA4251 pr... 80 8e-14
AL023094_16(AL023094|pid:none) Arabidopsis thaliana DNA chromoso... 80 8e-14
AL627205_5(AL627205|pid:none) Mouse DNA sequence from clone RP23... 80 8e-14
AF366901_1(AF366901|pid:none) Lotus japonicus phosphatidylinosit... 80 1e-13
(Q92503) RecName: Full=SEC14-like protein 1; &D67029_1(D67029|p... 80 1e-13
AY048199_1(AY048199|pid:none) Arabidopsis thaliana At1g72160/T9N... 80 1e-13
AK118252_1(AK118252|pid:none) Arabidopsis thaliana At1g14820 mRN... 80 1e-13
CP001330_285(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 80 1e-13
BC082398_1(BC082398|pid:none) Xenopus laevis MGC81931 protein, m... 80 1e-13
(Q0V9N0) RecName: Full=SEC14-like protein 5; &BC121463_1(BC1214... 80 1e-13
FB900256_1(FB900256|pid:none) Sequence 119529 from Patent WO2008... 79 2e-13
AL050351_8(AL050351|pid:none) Arabidopsis thaliana DNA chromosom... 79 2e-13
AM473362_1(AM473362|pid:none) Vitis vinifera contig VV78X199843.... 79 2e-13
FB900304_1(FB900304|pid:none) Sequence 119577 from Patent WO2008... 79 3e-13
AK118304_1(AK118304|pid:none) Arabidopsis thaliana At1g75370 mRN... 79 3e-13
AP007155_330(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 79 3e-13
AC140722_3(AC140722|pid:none) Medicago truncatula clone mth2-14e... 78 4e-13
BC151509_1(BC151509|pid:none) Bos taurus SEC14-like 1 (S. cerevi... 78 4e-13
FN392321_861(FN392321|pid:none) Pichia pastoris GS115 chromosome... 78 5e-13
FN392321_668(FN392321|pid:none) Pichia pastoris GS115 chromosome... 78 5e-13
EF678229_1(EF678229|pid:none) Picea sitchensis clone WS0285_N16 ... 77 7e-13
BC139912_1(BC139912|pid:none) Homo sapiens SEC14-like 4 (S. cere... 77 7e-13
AK100898_1(AK100898|pid:none) Oryza sativa Japonica Group cDNA c... 77 7e-13
(Q8R0F9) RecName: Full=SEC14-like protein 4; &AL807395_7(AL8073... 77 7e-13
AM910991_253(AM910991|pid:none) Plasmodium knowlesi strain H chr... 77 7e-13
BC120194_1(BC120194|pid:none) Bos taurus SEC14-like 4 (S. cerevi... 77 9e-13
(Q9VMD6) RecName: Full=Protein real-time; &AE014134_1141(AE0141... 77 9e-13
AC137613_5(AC137613|pid:none) Oryza sativa (japonica cultivar-gr... 77 9e-13
AC134927_4(AC134927|pid:none) Oryza sativa (japonica cultivar-gr... 77 1e-12
AE014296_1096(AE014296|pid:none) Drosophila melanogaster chromos... 76 2e-12
AP007155_329(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 76 2e-12
CU928179_148(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 76 2e-12
FB900312_1(FB900312|pid:none) Sequence 119585 from Patent WO2008... 75 4e-12
AY589690_1(AY589690|pid:none) Hevea brasiliensis putative phosph... 75 5e-12
FB900264_1(FB900264|pid:none) Sequence 119537 from Patent WO2008... 74 6e-12
EF083657_1(EF083657|pid:none) Picea sitchensis clone WS0286_I09 ... 74 6e-12
AY037182_1(AY037182|pid:none) Arabidopsis thaliana AT4g39170/T22... 74 6e-12
BC163195_1(BC163195|pid:none) Danio rerio hypothetical LOC566865... 74 8e-12
(O43304) RecName: Full=SEC14-like protein 5; &AB383878_1(AB3838... 74 8e-12
AB007880_1(AB007880|pid:none) Homo sapiens KIAA0420 mRNA, comple... 74 8e-12
AM478536_1(AM478536|pid:none) Vitis vinifera contig VV78X135118.... 74 1e-11
BC134901_1(BC134901|pid:none) Danio rerio hypothetical LOC566865... 73 1e-11
U32305_17(U32305|pid:none) Caenorhabditis elegans cosmid B0336, ... 73 1e-11
BC069641_1(BC069641|pid:none) Homo sapiens SEC14-like 3 (S. cere... 73 2e-11
AM434142_1(AM434142|pid:none) Vitis vinifera contig VV78X177908.... 73 2e-11
AY035162_1(AY035162|pid:none) Arabidopsis thaliana unknown prote... 73 2e-11
BT042333_1(BT042333|pid:none) Zea mays full-length cDNA clone ZM... 72 2e-11
CR954220_89(CR954220|pid:none) Ostreococcus tauri strain OTTH059... 72 2e-11
AM463399_5(AM463399|pid:none) Vitis vinifera contig VV78X025471.... 72 3e-11
AE014186_268(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 72 3e-11
AK317770_1(AK317770|pid:none) Arabidopsis thaliana AT1G75170 mRN... 72 4e-11
(Q9Z1J8) RecName: Full=SEC14-like protein 3; AltName: Full=45 kD... 72 4e-11
BT052862_1(BT052862|pid:none) Medicago truncatula clone MTYFL_FM... 72 4e-11
FB910573_1(FB910573|pid:none) Sequence 129846 from Patent WO2008... 71 5e-11
BC101004_1(BC101004|pid:none) Homo sapiens SEC14-like 3 (S. cere... 71 5e-11
(Q9UDX4) RecName: Full=SEC14-like protein 3; AltName: Full=Tocop... 71 5e-11
BT036725_1(BT036725|pid:none) Zea mays full-length cDNA clone ZM... 71 7e-11
DQ251455_1(DQ251455|pid:none) Cucurbita pepo patellin 1 (PATL1) ... 71 7e-11
BC162038_1(BC162038|pid:none) Rattus norvegicus SEC14-like 3 (S.... 70 9e-11
FB910589_1(FB910589|pid:none) Sequence 129862 from Patent WO2008... 70 1e-10
AC024609_2(AC024609|pid:none) Arabidopsis thaliana chromosome I ... 70 1e-10
AM440904_2(AM440904|pid:none) Vitis vinifera contig VV78X119347.... 70 1e-10
EU975210_1(EU975210|pid:none) Zea mays clone 484466 CRAL/TRIO do... 70 1e-10
CP000081_352(CP000081|pid:none) Leishmania major chromosome 35, ... 70 1e-10
AM502253_363(AM502253|pid:none) Leishmania infantum chromosome 35. 69 2e-10
FN357508_6(FN357508|pid:none) Schistosoma mansoni genome sequenc... 69 3e-10
EU970270_1(EU970270|pid:none) Zea mays clone 342912 transporter-... 69 3e-10
(P43378) RecName: Full=Tyrosine-protein phosphatase non-receptor... 68 4e-10
AB011476_22(AB011476|pid:none) Arabidopsis thaliana genomic DNA,... 68 6e-10
AC121244_18(AC121244|pid:none) Medicago truncatula clone mth2-31... 68 6e-10
BC077326_1(BC077326|pid:none) Xenopus laevis tyrosine phosphatas... 67 7e-10
AB102904_1(AB102904|pid:none) Solanum melongena 5E08 mRNA for hy... 67 7e-10
AP005641_13(AP005641|pid:none) Oryza sativa Japonica Group genom... 67 7e-10
AY814656_1(AY814656|pid:none) Schistosoma japonicum SJCHGC05717 ... 67 1e-09
(O35239) RecName: Full=Tyrosine-protein phosphatase non-receptor... 67 1e-09
(Q641Z2) RecName: Full=Tyrosine-protein phosphatase non-receptor... 67 1e-09
A53978(A53978) protein-tyrosine-phosphatase (EC 3.1.3.48), nonre... 66 2e-09
BX538350_41(BX538350|pid:none) Cryptosporidium parvum chromosome... 66 2e-09
AM435647_1(AM435647|pid:none) Vitis vinifera contig VV78X002580.... 66 2e-09
AP008209_756(AP008209|pid:none) Oryza sativa (japonica cultivar-... 66 2e-09
CP001331_271(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 66 2e-09
AK226714_1(AK226714|pid:none) Arabidopsis thaliana mRNA for hypo... 65 3e-09
EU964706_1(EU964706|pid:none) Zea mays clone 280990 hypothetical... 65 4e-09
EU962184_1(EU962184|pid:none) Zea mays clone 240809 patellin-5 m... 65 5e-09
AP008208_1167(AP008208|pid:none) Oryza sativa (japonica cultivar... 65 5e-09
AP004151_12(AP004151|pid:none) Oryza sativa Japonica Group genom... 65 5e-09
BT066580_1(BT066580|pid:none) Zea mays full-length cDNA clone ZM... 64 6e-09
AM920436_1692(AM920436|pid:none) Penicillium chrysogenum Wiscons... 64 8e-09
BT086595_1(BT086595|pid:none) Zea mays full-length cDNA clone ZM... 64 1e-08
CR382124_862(CR382124|pid:none) Kluyveromyces lactis strain NRRL... 64 1e-08
AK073077_1(AK073077|pid:none) Oryza sativa Japonica Group cDNA c... 64 1e-08
AP005192_15(AP005192|pid:none) Oryza sativa Japonica Group genom... 64 1e-08
B53978(B53978) protein-tyrosine-phosphatase (EC 3.1.3.48), nonre... 63 1e-08
AM494972_366(AM494972|pid:none) Leishmania braziliensis chromoso... 63 2e-08
AL161514_13(AL161514|pid:none) Arabidopsis thaliana DNA chromoso... 63 2e-08
(Q9M0R2) RecName: Full=Patellin-5; &AK229180_1(AK229180|pid:none) 63 2e-08
S28303(S28303)hypothetical protein T23G5.2 - Caenorhabditis eleg... 62 3e-08
AB025628_10(AB025628|pid:none) Arabidopsis thaliana genomic DNA,... 62 4e-08
AM270128_11(AM270128|pid:none) Aspergillus niger contig An07c010... 61 5e-08
AP008213_892(AP008213|pid:none) Oryza sativa (japonica cultivar-... 60 9e-08
BT063301_1(BT063301|pid:none) Zea mays full-length cDNA clone ZM... 60 1e-07
BT034417_1(BT034417|pid:none) Zea mays full-length cDNA clone ZM... 60 1e-07
AC183494_14(AC183494|pid:none) Brassica oleracea Contig C, compl... 60 2e-07
AM494971_349(AM494971|pid:none) Leishmania braziliensis chromoso... 60 2e-07
AC130600_5(AC130600|pid:none) Oryza sativa (japonica cultivar-gr... 59 3e-07
AB022215_14(AB022215|pid:none) Arabidopsis thaliana genomic DNA,... 59 3e-07
(P12271) RecName: Full=Retinaldehyde-binding protein 1; AltName:... 59 3e-07
BX538350_89(BX538350|pid:none) Cryptosporidium parvum chromosome... 59 3e-07
AE014298_1407(AE014298|pid:none) Drosophila melanogaster chromos... 59 3e-07
AE014298_1406(AE014298|pid:none) Drosophila melanogaster chromos... 59 3e-07
BC065863_1(BC065863|pid:none) Danio rerio retinaldehyde binding ... 59 3e-07
AE014298_1405(AE014298|pid:none) Drosophila melanogaster chromos... 59 3e-07
AM494969_142(AM494969|pid:none) Leishmania braziliensis chromoso... 57 8e-07
CU633872_232(CU633872|pid:none) Podospora anserina genomic DNA c... 57 1e-06
AB236749_1(AB236749|pid:none) Trifolium pratense RNA for putativ... 57 1e-06
CU928168_244(CU928168|pid:none) Kluyveromyces thermotolerans str... 57 1e-06
(Q6CXS7) RecName: Full=Phosphatidylinositol transfer protein SFH... 56 2e-06
AJ851795_1(AJ851795|pid:none) Gallus gallus mRNA for hypothetica... 56 2e-06
CP001325_516(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 56 2e-06
AK091402_1(AK091402|pid:none) Homo sapiens cDNA FLJ34083 fis, cl... 56 2e-06
AM502254_335(AM502254|pid:none) Leishmania infantum chromosome 36. 56 2e-06
A31955(A31955;A30052) cellular retinaldehyde-binding protein - b... 56 2e-06
(Q5RCA6) RecName: Full=Retinaldehyde-binding protein 1-like prot... 55 3e-06
(Q9D4C9) RecName: Full=Retinaldehyde-binding protein 1-like prot... 55 3e-06
(Q5SPP0) RecName: Full=Retinaldehyde-binding protein 1-like prot... 55 3e-06
AB060190_1(AB060190|pid:none) Macaca fascicularis brain cDNA clo... 55 3e-06
(Q5SYC1) RecName: Full=Retinaldehyde-binding protein 1-like prot... 55 3e-06
AK084350_1(AK084350|pid:none) Mus musculus 12 days embryo eyebal... 55 3e-06
CS300706_1(CS300706|pid:none) Sequence 214 from Patent EP1661986. 55 4e-06
(Q8IUQ0) RecName: Full=Retinaldehyde-binding protein 1-like prot... 55 4e-06
AB170306_1(AB170306|pid:none) Macaca fascicularis brain cDNA clo... 55 5e-06
AK319076_1(AK319076|pid:none) Arabidopsis thaliana AT1G22530 mRN... 54 6e-06
CR548612_329(CR548612|pid:none) Paramecium tetraurelia macronucl... 54 6e-06
AK033600_1(AK033600|pid:none) Mus musculus adult male cecum cDNA... 54 8e-06
(Q9D3D0) RecName: Full=Alpha-tocopherol transfer protein-like; ... 54 8e-06
AK314045_1(AK314045|pid:none) Homo sapiens cDNA, FLJ94708. 54 1e-05
AK092002_1(AK092002|pid:none) Homo sapiens cDNA FLJ34683 fis, cl... 54 1e-05
(Q5RFR0) RecName: Full=Alpha-tocopherol transfer protein-like; ... 54 1e-05
AY811478_1(AY811478|pid:none) Schistosoma japonicum SJCHGC07579 ... 54 1e-05
AL132772_7(AL132772|pid:none) Human DNA sequence from clone RP5-... 54 1e-05
AB174570_1(AB174570|pid:none) Macaca fascicularis brain cDNA clo... 53 1e-05
EU344787_1(EU344787|pid:none) Euprymna scolopes eye retinal-bind... 53 1e-05
CR936621_1(CR936621|pid:none) Homo sapiens mRNA; cDNA DKFZp686E0... 53 2e-05
AC002328_11(AC002328|pid:none) Genomic sequence for Arabidopsis ... 53 2e-05
AK061499_1(AK061499|pid:none) Oryza sativa Japonica Group cDNA c... 53 2e-05
AC149032_3(AC149032|pid:none) Medicago truncatula chromosome 2 c... 53 2e-05
EU344788_1(EU344788|pid:none) Euprymna scolopes light organ reti... 52 2e-05
EU960734_1(EU960734|pid:none) Zea mays clone 228070 unknown mRNA. 52 2e-05
CU928176_88(CU928176|pid:none) Zygosaccharomyces rouxii strain C... 51 5e-05
CP000585_72(CP000585|pid:none) Ostreococcus lucimarinus CCE9901 ... 51 5e-05
AP007167_442(AP007167|pid:none) Aspergillus oryzae RIB40 genomic... 51 5e-05
AK156572_1(AK156572|pid:none) Mus musculus activated spleen cDNA... 51 5e-05
(Q56WK6) RecName: Full=Patellin-1; &AC067754_3(AC067754|pid:non... 51 7e-05
BC149824_1(BC149824|pid:none) Bos taurus tocopherol (alpha) tran... 51 7e-05
FN392320_1253(FN392320|pid:none) Pichia pastoris GS115 chromosom... 50 9e-05
FN357392_40(FN357392|pid:none) Schistosoma mansoni genome sequen... 50 9e-05
BC055264_1(BC055264|pid:none) Danio rerio tocopherol (alpha) tra... 50 1e-04
(Q9Z275) RecName: Full=Retinaldehyde-binding protein 1; AltName:... 50 1e-04
(A1C4X0) RecName: Full=Phosphatidylinositol transfer protein sfh... 50 1e-04
AP007175_72(AP007175|pid:none) Aspergillus oryzae RIB40 genomic ... 50 2e-04
AC137003_6(AC137003|pid:none) Oryza sativa (japonica cultivar-gr... 50 2e-04
AM270353_25(AM270353|pid:none) Aspergillus niger contig An16c001... 50 2e-04
AM910989_179(AM910989|pid:none) Plasmodium knowlesi strain H chr... 50 2e-04
AC121244_14(AC121244|pid:none) Medicago truncatula clone mth2-31... 49 3e-04
EU961989_1(EU961989|pid:none) Zea mays clone 239491 SEC14-like p... 49 4e-04
AK068100_1(AK068100|pid:none) Oryza sativa Japonica Group cDNA c... 49 4e-04
AM435647_2(AM435647|pid:none) Vitis vinifera contig VV78X002580.... 48 5e-04
AC002304_8(AC002304|pid:none) Genomic sequence for Arabidopsis t... 48 6e-04
AK117291_1(AK117291|pid:none) Arabidopsis thaliana At4g39180 mRN... 48 6e-04
AF419577_1(AF419577|pid:none) Arabidopsis thaliana At1g55840/F14... 48 6e-04
(Q4WEP0) RecName: Full=Phosphatidylinositol transfer protein sfh... 48 6e-04
CU928170_225(CU928170|pid:none) Kluyveromyces thermotolerans str... 47 0.001
AY039892_1(AY039892|pid:none) Arabidopsis thaliana AT5g47730/MCA... 47 0.001
AP005446_11(AP005446|pid:none) Oryza sativa Japonica Group genom... 47 0.001
AL844505_259(AL844505|pid:none) Plasmodium falciparum 3D7 chromo... 47 0.001
AM910993_229(AM910993|pid:none) Plasmodium knowlesi strain H chr... 47 0.001
BC101003_1(BC101003|pid:none) Homo sapiens SEC14-like 3 (S. cere... 46 0.002
AK131358_1(AK131358|pid:none) Homo sapiens cDNA FLJ16390 fis, cl... 46 0.002
BC101001_1(BC101001|pid:none) Homo sapiens SEC14-like 3 (S. cere... 46 0.002
CR954204_259(CR954204|pid:none) Ostreococcus tauri strain OTTH05... 46 0.002
AC159428_26(AC159428|pid:none) Trypanosoma brucei chromosome 8 c... 46 0.002
AM484540_6(AM484540|pid:none) Vitis vinifera contig VV78X150121.... 46 0.002
(A1CZU9) RecName: Full=Phosphatidylinositol transfer protein sfh... 45 0.004
(Q0CE43) RecName: Full=Phosphatidylinositol transfer protein sfh... 45 0.005
AC074282_23(AC074282|pid:none) Oryza sativa (japonica cultivar-g... 44 0.007
(P41034) RecName: Full=Alpha-tocopherol transfer protein; ... 44 0.007
FN357620_18(FN357620|pid:none) Schistosoma mansoni genome sequen... 44 0.007
BX248497_10(BX248497|pid:none) Zebrafish DNA sequence from clone... 44 0.009
BT042349_1(BT042349|pid:none) Zea mays full-length cDNA clone ZM... 44 0.009
(P49638) RecName: Full=Alpha-tocopherol transfer protein; ... 44 0.009
U21938_1(U21938|pid:none) Human alpha-tocopherol transfer protei... 44 0.009
AM494952_65(AM494952|pid:none) Leishmania braziliensis chromosom... 44 0.011
AE014298_1408(AE014298|pid:none) Drosophila melanogaster chromos... 44 0.011
BC158931_1(BC158931|pid:none) Xenopus tropicalis cDNA clone IMAG... 43 0.015
BT033434_1(BT033434|pid:none) Zea mays full-length cDNA clone ZM... 43 0.015
(A2QUR1) RecName: Full=Phosphatidylinositol transfer protein sfh... 43 0.015
AF024651_1(AF024651|pid:none) Glycine max polyphosphoinositide b... 43 0.015
CP001160_28(CP001160|pid:none) Thalassiosira pseudonana CCMP1335... 43 0.020
EU967800_1(EU967800|pid:none) Zea mays clone 306221 unknown mRNA. 43 0.020
FN375308_1(FN375308|pid:none) Schistosoma mansoni genome sequenc... 42 0.025
(A6QT51) RecName: Full=Phosphatidylinositol transfer protein SFH... 42 0.033
AL132772_9(AL132772|pid:none) Human DNA sequence from clone RP5-... 42 0.043
BC099871_1(BC099871|pid:none) Mus musculus tocopherol (alpha) tr... 41 0.057
AF218416_1(AF218416|pid:none) Mus musculus hepatic alpha-tocophe... 41 0.057
AK053797_1(AK053797|pid:none) Mus musculus 0 day neonate eyeball... 41 0.074
CT005268_209(CT005268|pid:none) Leishmania major strain Friedlin... 41 0.074
AE014297_242(AE014297|pid:none) Drosophila melanogaster chromoso... 41 0.074
Z66524_7(Z66524|pid:none) Caenorhabditis elegans Cosmid T13H5, c... 40 0.097
T24897(T24897)hypothetical protein T13H5.2 - Caenorhabditis eleg... 40 0.097
FM992690_621(FM992690|pid:none) Candida dubliniensis CD36 chromo... 40 0.17
(Q75BM4) RecName: Full=Phosphatidylinositol transfer protein SFH... 40 0.17
(A5DEQ9) RecName: Full=Phosphatidylinositol transfer protein SFH... 39 0.28
BT067213_1(BT067213|pid:none) Zea mays full-length cDNA clone ZM... 39 0.28
CP001327_474(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 39 0.28
AF190740_1(AF190740|pid:none) Canis familiaris alpha-tocopherol ... 39 0.28
CR940353_820(CR940353|pid:none) Theileria annulata strain Ankara... 39 0.37
U79284_1(U79284|pid:none) Human SEC14L mRNA, partial cds. 39 0.37
AF390101_1(AF390101|pid:none) Aedes aegypti strain MOYO-R CRALBP... 38 0.48
AY064089_1(AY064089|pid:none) Aedes aegypti clone rBPcRc6 cellul... 38 0.48
AF329893_1(AF329893|pid:none) Aedes aegypti CRALBP (CRALBP) mRNA... 38 0.48
CT005268_207(CT005268|pid:none) Leishmania major strain Friedlin... 38 0.63
AC146751_6(AC146751|pid:none) Medicago truncatula clone mth2-60a... 37 0.82
AJ890364_399(AJ890364|pid:none) Emiliania huxleyi virus 86 isola... 37 0.82
AM746676_2456(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 36 1.8
(Q09270) RecName: Full=CRAL-TRIO domain-containing protein C34C1... 36 2.4
FN357313_7(FN357313|pid:none) Schistosoma mansoni genome sequenc... 36 2.4
AP006716_482(AP006716|pid:none) Staphylococcus haemolyticus JCSC... 35 3.1
AM494968_231(AM494968|pid:none) Leishmania braziliensis chromoso... 35 3.1
AE013599_489(AE013599|pid:none) Drosophila melanogaster chromoso... 35 3.1
AY814986_1(AY814986|pid:none) Schistosoma japonicum SJCHGC09045 ... 35 3.1
BC135266_1(BC135266|pid:none) Xenopus tropicalis hypothetical pr... 35 3.1
AM502249_243(AM502249|pid:none) Leishmania infantum chromosome 31. 35 4.1
CT005261_107(CT005261|pid:none) Leishmania major strain Friedlin... 35 5.3
AC005106_2(AC005106|pid:none) Genomic sequence for Arabidopsis t... 35 5.3
CP000853_2450(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 35 5.3
AC000098_1(AC000098|pid:none) Arabidopsis thaliana chromosome 1 ... 35 5.3
CP001327_429(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 35 5.3
(Q7JUR6) RecName: Full=Protein GDAP2 homolog; &AE013599_487(AE0... 34 6.9
(Q292F9) RecName: Full=Protein GDAP2 homolog; 34 6.9
AE013599_918(AE013599|pid:none) Drosophila melanogaster chromoso... 34 6.9
CP000596_260(CP000596|pid:none) Ostreococcus lucimarinus CCE9901... 34 6.9
CP000685_3225(CP000685|pid:none) Flavobacterium johnsoniae UW101... 34 6.9
DQ443157_1(DQ443157|pid:none) Bombyx mori cellular retinaldehyde... 34 6.9
AE014134_3199(AE014134|pid:none) Drosophila melanogaster chromos... 34 6.9
AE013599_488(AE013599|pid:none) Drosophila melanogaster chromoso... 34 6.9
AE014134_3200(AE014134|pid:none) Drosophila melanogaster chromos... 34 6.9
AM502240_103(AM502240|pid:none) Leishmania infantum chromosome 22. 34 6.9
AM482913_1(AM482913|pid:none) Vitis vinifera contig VV78X223670.... 34 6.9
CP001330_557(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 34 9.1
CT005268_32(CT005268|pid:none) Leishmania major strain Friedlin,... 34 9.1
EU290170_9(EU290170|pid:none) Pseudomonas putida PsfG (psfG), Ps... 34 9.1
AJ276035_1(AJ276035|pid:none) Nicotiana tabacum mRNA for putativ... 34 9.1

>AM270115_50(AM270115|pid:none) Aspergillus niger contig An06c0090,
complete genome.
Length = 475

Score = 170 bits (430), Expect = 8e-41
Identities = 94/251 (37%), Positives = 138/251 (54%), Gaps = 21/251 (8%)
Frame = +3

Query: 87 QEHQLGIIKSKIAEINDPVVEKEIQQLDDSMTLRFLRARKWNLKDSFDMLYEALKFRATF 266
+E Q ++ K EI + DS+ LRFLRARKW++K++ ML L++R
Sbjct: 112 KEFQQALVDMKPEEIRVTLWNMVKHDNPDSLLLRFLRARKWDVKNALVMLISTLRWRLLD 171

Query: 267 ----QDVGVEGITESMVVNE----------------LKSGKSYFHGVDKGGRPVCIVKTS 386
+D+ G ++ ++ ++ GKS+ HGVDK GRP+C+V+
Sbjct: 172 VKLDEDIMKNGEQSALKKSQSSDPAEKKAGEDFLLQMRMGKSFLHGVDKLGRPICVVRVR 231

Query: 387 RHDSYNRDLNESMRYCVYVMENGKSMLKDGIETCTLIFDMSDFSSKNMDYPLVKFMVELF 566
H + +++ R+ VY +E + ML +ET ++FDM+DFS NMDY VK+M++ F
Sbjct: 232 LHKAADQETEALDRFTVYTIETARMMLAPPVETACVVFDMTDFSLANMDYHPVKYMIKCF 291

Query: 567 QKFYPESLQKCLILNAPWIFMGIWHIIKHWLDPNTASKVSFVKTKQ-LVDYIPKDQLESS 743
+ YPE L LI APWIF GIW+IIK WLDP ASK+ F K Q L +IPKD++
Sbjct: 292 EANYPECLGVVLIHKAPWIFSGIWNIIKGWLDPVVASKIQFTKNVQDLEKFIPKDRIMKE 351

Query: 744 YGGTSTFKYTY 776
G + Y Y
Sbjct: 352 LEGDENWAYKY 362

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,326,685,248
Number of extensions: 25126931
Number of successful extensions: 59009
Number of sequences better than 10.0: 379
Number of HSP's gapped: 58595
Number of HSP's successfully gapped: 387
Length of query: 336
Length of database: 1,040,966,779
Length adjustment: 129
Effective length of query: 207
Effective length of database: 627,614,014
Effective search space: 129916100898
Effective search space used: 129916100898
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.62 gvh: 0.31 alm: 0.34 top: 0.53 tms: 0.00 mit: 0.18 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: cytoplasmic
28.0 %: nuclear
12.0 %: cytoskeletal
4.0 %: mitochondrial
4.0 %: vacuolar
4.0 %: peroxisomal

>> prediction for Contig-U08330-1 is cyt

VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 3
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 2
FC-IC (SUB) 2