| Contig-U08278-1 |
| Contig ID |
Contig-U08278-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
1279 |
| Chromosome number (1..6, M) |
5 |
| Chromosome length |
5062330 |
| Start point |
1274786 |
| End point |
1276065 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
4 |
| Number of EST |
5 |
| Link to clone list |
U08278 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.12 |
| Homology vs DNA |
|
| protein update |
2009. 6.24 |
| Homology vs Protein |
Query= Contig-U08278-1 (Contig-U08278-1Q) /CSM_Contig/Contig-U08278-1Q.Seq.d
(1279 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB051504_1(AB051504|pid:none) Homo sapiens mRNA for KIAA1717 pro... 146 2e-33
AC114743_2(AC114743|pid:none) Homo sapiens BAC clone RP11-103H17... 146 2e-33
(Q7Z0G7) RecName: Full=Histone-lysine N-methyltransferase SETD7;... 130 1e-28
BT078342_1(BT078342|pid:none) Lepeophtheirus salmonis clone lsal... 110 1e-22
CP001291_2336(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 68 8e-10
CR548612_353(CR548612|pid:none) Paramecium tetraurelia macronucl... 66 2e-09
DQ141553_1(DQ141553|pid:none) Mus musculus haplotype tw32 TSGA2 ... 66 2e-09
CP000934_1324(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 65 4e-09
DQ141555_1(DQ141555|pid:none) Mus musculus strain C57BL/6 TSGA2 ... 65 7e-09
(Q8VIG3) RecName: Full=Radial spoke head 1 homolog; AltName: Ful... 65 7e-09
CP001150_658(CP001150|pid:none) Rhodobacter sphaeroides KD131 ch... 64 9e-09
DQ141556_1(DQ141556|pid:none) Mus musculus haplotype tw32 TSGA2 ... 64 9e-09
CR954209_188(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 64 1e-08
BC111309_1(BC111309|pid:none) Bos taurus radial spoke head 1 hom... 64 2e-08
AM910988_157(AM910988|pid:none) Plasmodium knowlesi strain H chr... 64 2e-08
AE015928_747(AE015928|pid:none) Bacteroides thetaiotaomicron VPI... 64 2e-08
CP000362_1126(CP000362|pid:none) Roseobacter denitrificans OCh 1... 63 2e-08
AM286690_538(AM286690|pid:none) Alcanivorax borkumensis SK2, com... 63 3e-08
BX538351_69(BX538351|pid:none) Cryptosporidium parvum chromosome... 62 3e-08
(Q8WYR4) RecName: Full=Radial spoke head 1 homolog; AltName: Ful... 62 4e-08
AB501299_1(AB501299|pid:none) Ciona intestinalis Ci-MORN40 mRNA ... 61 8e-08
AP008955_4225(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 61 8e-08
CP000139_3222(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 60 1e-07
CT005267_354(CT005267|pid:none) Leishmania major strain Friedlin... 60 2e-07
CP000377_2278(CP000377|pid:none) Silicibacter sp. TM1040, comple... 60 2e-07
AM502248_374(AM502248|pid:none) Leishmania infantum chromosome 30. 60 2e-07
AE014185_303(AE014185|pid:none) Plasmodium falciparum 3D7 chromo... 60 2e-07
CP000489_849(CP000489|pid:none) Paracoccus denitrificans PD1222 ... 60 2e-07
CP001574_31(CP001574|pid:none) Micromonas sp. RCC299 chromosome ... 59 5e-07
AL670413_3(AL670413|pid:none) Mouse DNA sequence from clone RP23... 58 6e-07
CP000721_2868(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 58 6e-07
AL670413_4(AL670413|pid:none) Mouse DNA sequence from clone RP23... 58 6e-07
AK015161_1(AK015161|pid:none) Mus musculus adult male testis cDN... 58 6e-07
CP000830_597(CP000830|pid:none) Dinoroseobacter shibae DFL 12, c... 58 6e-07
AP006841_2228(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 57 1e-06
CP000264_3345(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 57 1e-06
CR548612_387(CR548612|pid:none) Paramecium tetraurelia macronucl... 57 1e-06
CP000304_3706(CP000304|pid:none) Pseudomonas stutzeri A1501, com... 57 1e-06
AY815644_1(AY815644|pid:none) Schistosoma japonicum SJCHGC09106 ... 57 2e-06
CP000094_4978(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 56 2e-06
AM180355_2466(AM180355|pid:none) Clostridium difficile 630 compl... 56 2e-06
AM180355_1493(AM180355|pid:none) Clostridium difficile 630 compl... 56 3e-06
CR548612_189(CR548612|pid:none) Paramecium tetraurelia macronucl... 56 3e-06
AC159429_39(AC159429|pid:none) Trypanosoma brucei chromosome 7 c... 56 3e-06
AF157047_1(AF157047|pid:none) Nicotiana rustica putative phospha... 56 3e-06
AM502238_64(AM502238|pid:none) Leishmania infantum chromosome 20. 56 3e-06
AM502238_14(AM502238|pid:none) Leishmania infantum chromosome 20. 55 4e-06
CT005244_40(CT005244|pid:none) Leishmania major strain Friedlin,... 55 4e-06
AY883856_1(AY883856|pid:none) Sterkiella histriomuscorum putativ... 55 7e-06
(Q56YP2) RecName: Full=Phosphatidylinositol-4-phosphate 5-kinase... 54 9e-06
CT005259_62(CT005259|pid:none) Leishmania major strain Friedlin,... 54 9e-06
CP000383_647(CP000383|pid:none) Cytophaga hutchinsonii ATCC 3340... 54 9e-06
FN372142_1(FN372142|pid:none) Schistosoma mansoni genome sequenc... 54 9e-06
AC013482_21(AC013482|pid:none) Genomic sequence for Arabidopsis ... 54 9e-06
AF019380_1(AF019380|pid:none) Arabidopsis thaliana putative phos... 54 9e-06
CP000529_839(CP000529|pid:none) Polaromonas naphthalenivorans CJ... 54 2e-05
AB094044_1(AB094044|pid:none) Arabidopsis thaliana mRNA for hypo... 54 2e-05
BC093170_1(BC093170|pid:none) Danio rerio MORN repeat containing... 54 2e-05
AM494957_421(AM494957|pid:none) Leishmania braziliensis chromoso... 53 2e-05
(P0C881) RecName: Full=Radial spoke head 10 homolog B; 53 2e-05
AM502244_144(AM502244|pid:none) Leishmania infantum chromosome 26. 53 2e-05
AK314983_1(AK314983|pid:none) Homo sapiens cDNA, FLJ95901. 53 2e-05
AM055943_44(AM055943|pid:none) Toxoplasma gondii RH, genomic DNA... 53 2e-05
BC157871_1(BC157871|pid:none) Homo sapiens radial spoke head 10 ... 53 2e-05
BC034495_1(BC034495|pid:none) Homo sapiens radial spoke head 10 ... 53 2e-05
AL513477_6(AL513477|pid:none) Human DNA sequence from clone RP4-... 53 2e-05
BC021704_1(BC021704|pid:none) Homo sapiens MORN repeat containin... 53 2e-05
AM494942_40(AM494942|pid:none) Leishmania braziliensis chromosom... 53 2e-05
CP000829_34(CP000829|pid:none) Streptococcus pyogenes NZ131, com... 53 2e-05
CR548612_206(CR548612|pid:none) Paramecium tetraurelia macronucl... 53 3e-05
BA000012_2547(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 53 3e-05
AC008263_3(AC008263|pid:none) Arabidopsis thaliana chromosome 1 ... 53 3e-05
DQ181548_1(DQ181548|pid:none) Toxoplasma gondii membrance occupa... 53 3e-05
AJ270205_1(AJ270205|pid:none) Entodinium caudatum partial mRNA f... 53 3e-05
AK227735_1(AK227735|pid:none) Arabidopsis thaliana mRNA for hypo... 53 3e-05
A96780(A96780) hypothetical protein F9E10.14 [imported] - Arabid... 53 3e-05
CT005259_13(CT005259|pid:none) Leishmania major strain Friedlin,... 52 3e-05
EU016562_18(EU016562|pid:none) Uncultured marine microorganism H... 52 3e-05
EU016581_12(EU016581|pid:none) Uncultured marine microorganism H... 52 5e-05
AM181176_5318(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 52 5e-05
BT061813_1(BT061813|pid:none) Zea mays full-length cDNA clone ZM... 52 6e-05
FJ024081_1(FJ024081|pid:none) Physcomitrella patens phosphatidyl... 52 6e-05
AC159458_38(AC159458|pid:none) Trypanosoma brucei chromosome 7 c... 52 6e-05
AM910994_445(AM910994|pid:none) Plasmodium knowlesi strain H chr... 51 8e-05
AM502254_434(AM502254|pid:none) Leishmania infantum chromosome 36. 51 8e-05
CT005255_11(CT005255|pid:none) Leishmania major strain Friedlin,... 51 8e-05
AE014185_99(AE014185|pid:none) Plasmodium falciparum 3D7 chromos... 51 8e-05
DQ298250_1(DQ298250|pid:none) Chlamydomonas reinhardtii radial s... 51 8e-05
EU016573_25(EU016573|pid:none) Uncultured marine microorganism H... 51 8e-05
AM494940_88(AM494940|pid:none) Leishmania braziliensis chromosom... 51 1e-04
BT025392_1(BT025392|pid:none) Bos taurus hypothetical protein LO... 51 1e-04
CP001071_592(CP001071|pid:none) Akkermansia muciniphila ATCC BAA... 51 1e-04
AC125735_95(AC125735|pid:none) Leishmania major strain Friedlin ... 51 1e-04
BT050084_1(BT050084|pid:none) Salmo salar clone ssal-evf-564-311... 51 1e-04
AM502247_197(AM502247|pid:none) Leishmania infantum chromosome 29. 51 1e-04
(Q1JPG1) RecName: Full=Radial spoke head 10 homolog B; 51 1e-04
EU016561_12(EU016561|pid:none) Uncultured marine microorganism H... 50 1e-04
AM494953_11(AM494953|pid:none) Leishmania braziliensis chromosom... 50 1e-04
FJ460465_1(FJ460465|pid:none) Brassica rapa subsp. pekinensis MO... 50 1e-04
CR954207_399(CR954207|pid:none) Ostreococcus tauri strain OTTH05... 50 2e-04
CP000075_634(CP000075|pid:none) Pseudomonas syringae pv. syringa... 50 2e-04
AC146573_14(AC146573|pid:none) Medicago truncatula clone mth2-14... 50 2e-04
AP008217_224(AP008217|pid:none) Oryza sativa (japonica cultivar-... 50 2e-04
CR940347_903(CR940347|pid:none) Theileria annulata strain Ankara... 50 2e-04
AE010300_3738(AE010300|pid:none) Leptospira interrogans serovar ... 50 2e-04
AE016823_473(AE016823|pid:none) Leptospira interrogans serovar C... 50 2e-04
AM502221_57(AM502221|pid:none) Leishmania infantum chromosome 3. 50 2e-04
BC122085_1(BC122085|pid:none) Xenopus tropicalis hypothetical pr... 49 3e-04
AF122023_1(AF122023|pid:none) Eufolliculina uhligi clone EuT12 u... 49 3e-04
(Q6EX42) RecName: Full=Phosphatidylinositol-4-phosphate 5-kinase... 49 3e-04
AE015927_1603(AE015927|pid:none) Clostridium tetani E88, complet... 49 3e-04
AC091775_10(AC091775|pid:none) Oryza sativa chromosome 3 BAC OSJ... 49 3e-04
CT005272_186(CT005272|pid:none) Leishmania major strain Friedlin... 49 3e-04
AE014133_60(AE014133|pid:none) Streptococcus mutans UA159, compl... 49 4e-04
AM494963_144(AM494963|pid:none) Leishmania braziliensis chromoso... 49 4e-04
AE014187_584(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 49 4e-04
CP000744_1083(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 49 4e-04
AE005672_1925(AE005672|pid:none) Streptococcus pneumoniae TIGR4,... 49 4e-04
AM946015_59(AM946015|pid:none) Streptococcus uberis 0140J comple... 49 5e-04
AM910991_274(AM910991|pid:none) Plasmodium knowlesi strain H chr... 49 5e-04
AE009948_51(AE009948|pid:none) Streptococcus agalactiae 2603V/R,... 48 7e-04
CP001327_435(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 48 7e-04
CP000448_2228(CP000448|pid:none) Syntrophomonas wolfei subsp. wo... 48 7e-04
FB904241_1(FB904241|pid:none) Sequence 123514 from Patent WO2008... 48 7e-04
G86242(G86242) hypothetical protein [imported] - Arabidopsis tha... 48 7e-04
AL766843_51(AL766843|pid:none) Streptococcus agalactiae NEM316 c... 48 7e-04
AC004667_14(AC004667|pid:none) Arabidopsis thaliana chromosome 2... 48 9e-04
CT005265_141(CT005265|pid:none) Leishmania major strain Friedlin... 48 9e-04
AK299217_1(AK299217|pid:none) Homo sapiens cDNA FLJ60334 complet... 48 9e-04
BT060638_1(BT060638|pid:none) Zea mays full-length cDNA clone ZM... 48 9e-04
CP000076_5380(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 47 0.001
DQ298254_1(DQ298254|pid:none) Chlamydomonas reinhardtii radial s... 47 0.001
CP000084_1279(CP000084|pid:none) Candidatus Pelagibacter ubique ... 47 0.001
AC114263_19(AC114263|pid:none) Dictyostelium discoideum chromoso... 47 0.001
AM472166_1(AM472166|pid:none) Vitis vinifera contig VV78X131919.... 47 0.001
AM270358_20(AM270358|pid:none) Aspergillus niger contig An16c006... 47 0.001
AL929603_68(AL929603|pid:none) Trypanosoma brucei chromosome 1, ... 47 0.001
CR940352_396(CR940352|pid:none) Theileria annulata strain Ankara... 47 0.001
(O48709) RecName: Full=Phosphatidylinositol-4-phosphate 5-kinase... 47 0.001
CP000587_402(CP000587|pid:none) Ostreococcus lucimarinus CCE9901... 47 0.001
AJ277559_1(AJ277559|pid:none) Lycopersicon esculentum partial mR... 47 0.001
AC010704_24(AC010704|pid:none) Arabidopsis thaliana chromosome 1... 47 0.001
(Q5BJS9) RecName: Full=MORN repeat-containing protein 4; &BC091... 47 0.002
CT005250_9(CT005250|pid:none) Leishmania major strain Friedlin, ... 47 0.002
AM494959_130(AM494959|pid:none) Leishmania braziliensis chromoso... 47 0.002
CP000680_3784(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 47 0.002
AE004091_4015(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 47 0.002
AY087662_1(AY087662|pid:none) Arabidopsis thaliana clone 37462 m... 47 0.002
(Q66HB5) RecName: Full=Radial spoke head 10 homolog B; &BC08193... 47 0.002
AK120829_1(AK120829|pid:none) Oryza sativa Japonica Group cDNA c... 46 0.003
BT041394_1(BT041394|pid:none) Zea mays full-length cDNA clone ZM... 46 0.003
AJ312050_1(AJ312050|pid:none) Homo sapiens mRNA for 44050 protei... 46 0.003
(Q4R842) MORN repeat-containing protein 3. &AB168617_1(AB168617... 46 0.003
AC084763_22(AC084763|pid:none) Oryza sativa chromosome 10 BAC OS... 45 0.004
CP000725_111(CP000725|pid:none) Streptococcus gordonii str. Chal... 45 0.004
CP000949_602(CP000949|pid:none) Pseudomonas putida W619, complet... 45 0.006
BT020837_1(BT020837|pid:none) Bos taurus chromosome 10 open read... 45 0.006
CP000348_1615(CP000348|pid:none) Leptospira borgpetersenii serov... 45 0.006
AM461285_8(AM461285|pid:none) Vitis vinifera contig VV79X002621.... 45 0.006
AB159444_1(AB159444|pid:none) Oryza sativa Japonica Group ARC3 m... 45 0.006
AM494968_305(AM494968|pid:none) Leishmania braziliensis chromoso... 45 0.006
CP000962_1588(CP000962|pid:none) Clostridium botulinum A3 str. L... 45 0.007
CP001129_38(CP001129|pid:none) Streptococcus equi subsp. zooepid... 45 0.007
EU974616_1(EU974616|pid:none) Zea mays clone 454481 ICE-like pro... 45 0.007
CT573326_4496(CT573326|pid:none) Pseudomonas entomophila str. L4... 45 0.007
AE014187_118(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 45 0.007
CP000448_2210(CP000448|pid:none) Syntrophomonas wolfei subsp. wo... 44 0.010
(Q8RY89) RecName: Full=Phosphatidylinositol-4-phosphate 5-kinase... 44 0.010
AM412317_1490(AM412317|pid:none) Clostridium botulinum A str. AT... 44 0.010
AC018908_4(AC018908|pid:none) Arabidopsis thaliana chromosome 1 ... 44 0.010
CP001083_1519(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 44 0.010
FJ182403_1(FJ182403|pid:none) Capsella grandiflora isolate Ioani... 44 0.012
AM494972_200(AM494972|pid:none) Leishmania braziliensis chromoso... 44 0.012
CR548612_361(CR548612|pid:none) Paramecium tetraurelia macronucl... 44 0.012
CP000777_2037(CP000777|pid:none) Leptospira biflexa serovar Pato... 44 0.016
AB005902_1(AB005902|pid:none) Arabidopsis thaliana mRNA for AtPI... 44 0.016
EU553597_1(EU553597|pid:none) Arabidopsis arenosa isolate A7 At1... 43 0.021
BC044242_1(BC044242|pid:none) Homo sapiens radial spoke head 10 ... 43 0.021
AK077141_1(AK077141|pid:none) Mus musculus adult male testis cDN... 43 0.021
AK294481_1(AK294481|pid:none) Homo sapiens cDNA FLJ54347 complet... 43 0.021
AE013599_4267(AE013599|pid:none) Drosophila melanogaster chromos... 43 0.028
AM445252_1(AM445252|pid:none) Vitis vinifera contig VV78X052992.... 43 0.028
AM502250_79(AM502250|pid:none) Leishmania infantum chromosome 32. 43 0.028
AM920436_1432(AM920436|pid:none) Penicillium chrysogenum Wiscons... 43 0.028
CP001160_459(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 42 0.036
AE010300_1922(AE010300|pid:none) Leptospira interrogans serovar ... 42 0.036
BX322595_4(BX322595|pid:none) Zebrafish DNA sequence from clone ... 42 0.036
BT078266_1(BT078266|pid:none) Lepeophtheirus salmonis clone lsal... 42 0.036
CT005268_275(CT005268|pid:none) Leishmania major strain Friedlin... 42 0.036
AE016823_1922(AE016823|pid:none) Leptospira interrogans serovar ... 42 0.036
AE014134_1726(AE014134|pid:none) Drosophila melanogaster chromos... 42 0.047
CT005269_43(CT005269|pid:none) Leishmania major strain Friedlin,... 42 0.047
EU306856_1(EU306856|pid:none) Drosophila silvestris clone sv3E-V... 42 0.047
CP000777_1644(CP000777|pid:none) Leptospira biflexa serovar Pato... 42 0.047
CT005272_392(CT005272|pid:none) Leishmania major strain Friedlin... 42 0.062
AE010300_3975(AE010300|pid:none) Leptospira interrogans serovar ... 41 0.080
AM461588_1(AM461588|pid:none) Vitis vinifera contig VV78X037943.... 41 0.080
CP001323_199(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 41 0.080
AM910992_219(AM910992|pid:none) Plasmodium knowlesi strain H chr... 41 0.080
CP000586_267(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 41 0.080
CR954212_8(CR954212|pid:none) Ostreococcus tauri strain OTTH0595... 41 0.11
FN357623_9(FN357623|pid:none) Schistosoma mansoni genome sequenc... 41 0.11
EU973692_1(EU973692|pid:none) Zea mays clone 406685 unknown mRNA. 41 0.11
CP001159_277(CP001159|pid:none) Thalassiosira pseudonana CCMP133... 40 0.14
BT082989_1(BT082989|pid:none) Anoplopoma fimbria clone afim-evh-... 40 0.14
AM494969_49(AM494969|pid:none) Leishmania braziliensis chromosom... 40 0.18
CP000503_3222(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 40 0.18
CR954213_65(CR954213|pid:none) Ostreococcus tauri strain OTTH059... 40 0.18
AM910990_100(AM910990|pid:none) Plasmodium knowlesi strain H chr... 40 0.18
CP001577_171(CP001577|pid:none) Micromonas sp. RCC299 chromosome... 40 0.23
AE014186_288(AE014186|pid:none) Plasmodium falciparum 3D7 chromo... 40 0.23
CP001159_273(CP001159|pid:none) Thalassiosira pseudonana CCMP133... 40 0.23
AE013599_2743(AE013599|pid:none) Drosophila melanogaster chromos... 39 0.31
BX088560_1(BX088560|pid:none) Zebrafish DNA sequence from clone ... 39 0.31
AL844509_64(AL844509|pid:none) Plasmodium falciparum 3D7 chromos... 39 0.31
CU207211_476(CU207211|pid:none) Herminiimonas arsenicoxydans chr... 39 0.31
AM910991_40(AM910991|pid:none) Plasmodium knowlesi strain H chro... 39 0.31
CP000079_238(CP000079|pid:none) Leishmania major strain Friedlin... 39 0.31
CP000777_3085(CP000777|pid:none) Leptospira biflexa serovar Pato... 39 0.31
AM502245_190(AM502245|pid:none) Leishmania infantum chromosome 27. 39 0.31
DQ119663_1(DQ119663|pid:none) Chlamydomonas reinhardtii central ... 39 0.31
CP000592_308(CP000592|pid:none) Ostreococcus lucimarinus CCE9901... 39 0.40
AE014186_65(AE014186|pid:none) Plasmodium falciparum 3D7 chromos... 39 0.40
CP000494_1333(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 39 0.52
BC117663_1(BC117663|pid:none) Danio rerio junctophilin 1b, mRNA ... 39 0.52
AX887105_1(AX887105|pid:none) Sequence 2968 from Patent EP1033401. 39 0.52
FN357554_34(FN357554|pid:none) Schistosoma mansoni genome sequen... 39 0.52
EU916176_136(EU916176|pid:none) Feldmannia species virus isolate... 38 0.68
CP001326_85(CP001326|pid:none) Micromonas sp. RCC299 chromosome ... 38 0.68
AM494964_249(AM494964|pid:none) Leishmania braziliensis chromoso... 38 0.68
CP000606_2454(CP000606|pid:none) Shewanella loihica PV-4, comple... 38 0.68
CP000698_937(CP000698|pid:none) Geobacter uraniireducens Rf4, co... 38 0.89
BX640412_124(BX640412|pid:none) Bordetella pertussis strain Toha... 38 0.89
CP000383_1512(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 38 0.89
AB046783_1(AB046783|pid:none) Homo sapiens mRNA for KIAA1563 pro... 38 0.89
AF170073_1(AF170073|pid:none) Plasmodium falciparum sexual stage... 38 0.89
AL844509_480(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 38 0.89
AE009951_617(AE009951|pid:none) Fusobacterium nucleatum subsp. n... 38 0.89
AM494942_108(AM494942|pid:none) Leishmania braziliensis chromoso... 38 0.89
(Q5BIW4) RecName: Full=Alsin; AltName: Full=Amyotrophic lateral ... 38 0.89
AC007279_1(AC007279|pid:none) Homo sapiens BAC clone RP11-309N8 ... 38 0.89
AM910995_242(AM910995|pid:none) Plasmodium knowlesi strain H chr... 33 0.92
AM902716_25(AM902716|pid:none) Bordetella petrii strain DSM 1280... 37 1.2
AE014187_276(AE014187|pid:none) Plasmodium falciparum 3D7 chromo... 37 1.2
AL627168_4(AL627168|pid:none) Zebrafish DNA sequence from clone ... 37 1.2
CR855570_1(CR855570|pid:none) Xenopus tropicalis finished cDNA, ... 37 1.2
BC160387_1(BC160387|pid:none) Xenopus tropicalis hypothetical pr... 37 1.2
AE001362_48(AE001362|pid:none) Plasmodium falciparum 3D7 chromos... 37 1.2
DQ068067_72(DQ068067|pid:none) Uncultured bacterium BAC13K9BAC, ... 37 1.2
CP001325_599(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 37 1.2
AE014297_188(AE014297|pid:none) Drosophila melanogaster chromoso... 37 1.5
BC071576_1(BC071576|pid:none) Homo sapiens amyotrophic lateral s... 37 1.5
AL844504_111(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 37 1.5
(Q920R0) RecName: Full=Alsin; AltName: Full=Amyotrophic lateral ... 37 1.5
AK171800_1(AK171800|pid:none) Mus musculus activated spleen cDNA... 37 1.5
CP000777_2887(CP000777|pid:none) Leptospira biflexa serovar Pato... 37 1.5
AY224443_1(AY224443|pid:none) Oryza sativa (japonica cultivar-gr... 37 1.5
AB053307_1(AB053307|pid:none) Mus musculus Als2 mRNA, complete c... 37 1.5
BC046828_1(BC046828|pid:none) Mus musculus amyotrophic lateral s... 37 1.5
AP008214_1264(AP008214|pid:none) Oryza sativa (japonica cultivar... 37 1.5
BX640452_63(BX640452|pid:none) Bordetella bronchiseptica strain ... 37 2.0
CP000084_456(CP000084|pid:none) Candidatus Pelagibacter ubique H... 37 2.0
BX640436_199(BX640436|pid:none) Bordetella parapertussis strain ... 37 2.0
AK014320_1(AK014320|pid:none) Mus musculus 14, 17 days embryo he... 37 2.0
(P0C5Y8) RecName: Full=Alsin; AltName: Full=Amyotrophic lateral ... 37 2.0
AL844504_144(AL844504|pid:none) Plasmodium falciparum 3D7 chromo... 37 2.0
AK082880_1(AK082880|pid:none) Mus musculus 7 days embryo whole b... 37 2.0
CU207366_2194(CU207366|pid:none) Gramella forsetii KT0803 comple... 37 2.0
(Q9ET77) RecName: Full=Junctophilin-3; AltName: Full=Junctophili... 37 2.0
AK045706_1(AK045706|pid:none) Mus musculus adult male corpora qu... 37 2.0
CP000681_905(CP000681|pid:none) Shewanella putrefaciens CN-32, c... 36 2.6
AL928934_2(AL928934|pid:none) Zebrafish DNA sequence from clone ... 36 2.6
FN357415_19(FN357415|pid:none) Schistosoma mansoni genome sequen... 36 2.6
CR954959_1(CR954959|pid:none) Zebrafish DNA sequence from clone ... 36 2.6
AE017125_643(AE017125|pid:none) Helicobacter hepaticus ATCC 5144... 36 2.6
CP001408_4108(CP001408|pid:none) Burkholderia pseudomallei MSHR3... 36 3.4
AK031092_1(AK031092|pid:none) Mus musculus 13 days embryo foreli... 36 3.4
(Q80WT0) RecName: Full=Junctophilin-4; AltName: Full=Junctophili... 36 3.4
AB058734_1(AB058734|pid:none) Homo sapiens mRNA for KIAA1831 pro... 36 3.4
AE016823_209(AE016823|pid:none) Leptospira interrogans serovar C... 36 3.4
AB042640_1(AB042640|pid:none) Homo sapiens JP3 gene for junctoph... 36 3.4
AC137522_2(AC137522|pid:none) Medicago truncatula clone mth2-9h8... 36 3.4
BC036533_1(BC036533|pid:none) Homo sapiens junctophilin 3, mRNA ... 36 3.4
(Q96JJ6) RecName: Full=Junctophilin-4; AltName: Full=Junctophili... 36 3.4
BC055429_1(BC055429|pid:none) Homo sapiens junctophilin 4, mRNA ... 36 3.4
AK290511_1(AK290511|pid:none) Homo sapiens cDNA FLJ75143 complet... 36 3.4
(Q8WXH2) RecName: Full=Junctophilin-3; AltName: Full=Junctophili... 36 3.4
AJ508395_1(AJ508395|pid:none) Tetrahymena thermophila macronucle... 35 4.4
AM502238_70(AM502238|pid:none) Leishmania infantum chromosome 20. 35 4.4
AJ426651_1(AJ426651|pid:none) Suberites domuncula mRNA for caspa... 35 5.7
CP000941_754(CP000941|pid:none) Xylella fastidiosa M12, complete... 35 5.7
AC159412_39(AC159412|pid:none) Trypanosoma brucei chromosome 7 c... 35 5.8
AC155101_2(AC155101|pid:none) Medicago truncatula clone mth2-139... 35 5.8
(O60016) RecName: Full=Histone-lysine N-methyltransferase, H3 ly... 35 7.5
CR954214_167(CR954214|pid:none) Ostreococcus tauri strain OTTH05... 35 7.5
CR932231_1(CR932231|pid:none) RNA-dependent RNA polymerase, Para... 35 7.5
(Q9GKY8) RecName: Full=Junctophilin-1; AltName: Full=Junctophili... 35 7.5
BC098299_1(BC098299|pid:none) Homo sapiens junctophilin 1, mRNA ... 35 7.5
CP000753_940(CP000753|pid:none) Shewanella baltica OS185, comple... 35 7.5
CP000383_1387(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 35 7.5
(Q9ET80) RecName: Full=Junctophilin-1; AltName: Full=Junctophili... 35 7.5
(Q9GKY7) RecName: Full=Junctophilin-2; AltName: Full=Junctophili... 35 7.5
BC049372_1(BC049372|pid:none) Homo sapiens junctophilin 1, mRNA ... 35 7.5
AL844509_46(AL844509|pid:none) Plasmodium falciparum 3D7 chromos... 34 9.8
AM050264_1(AM050264|pid:none) Cercopis vulnerata mRNA for putati... 34 9.8
EU057689_1(EU057689|pid:none) Solanum lycopersicum EZ2 (EZ2) mRN... 34 9.8
(Q54I51) RecName: Full=Putative uncharacterized protein DDB_G028... 34 9.8
AM181176_1598(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 34 9.8
EF406120_5(EF406120|pid:none) Pseudomonas putida strain U phenyl... 34 9.8
CP000926_2458(CP000926|pid:none) Pseudomonas putida GB-1, comple... 34 9.8
>AB051504_1(AB051504|pid:none) Homo sapiens mRNA for KIAA1717 protein,
partial cds.
Length = 420
Score = 146 bits (368), Expect = 2e-33
Identities = 77/169 (45%), Positives = 107/169 (63%), Gaps = 7/169 (4%)
Frame = +3
Query: 732 NFILKLDESNQNTISTSPLHIDLYERFHCFVGKQSTIPNSGEGLFAKIFIPSGTIISFYN 911
N + D+S + IST+ L D YE +V +S I ++GEGLF+K+ + T++SFYN
Sbjct: 242 NSVYHFDKSTSSCISTNALLPDPYESERVYVA-ESLISSAGEGLFSKVAVGPNTVMSFYN 300
Query: 912 GVRLTHQLVNSRSWSENNNTISLNHETVIDVPPHLNDTVTQYSATISHKANHLVPANNSV 1091
GVR+THQ V+SR W+ N NT+SL+ ETVIDVP N V++Y A++ HKANH N +
Sbjct: 301 GVRITHQEVDSRDWALNGNTLSLDEETVIDVPEPYNH-VSKYCASLGHKANHSF-TPNCI 358
Query: 1092 YASFYHPRFGDIKCIKAIKDINENEEIFVDYGY-------SNNDTPSWY 1217
Y F HPRFG IKCI+ ++ + +EE+ V YGY S + P WY
Sbjct: 359 YDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSPPGKSGPEAPEWY 407
Score = 79.0 bits (193), Expect = 3e-13
Identities = 39/98 (39%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = +2
Query: 200 YVGEFINNEKNGKGIIYYEDGTLIEGNWKDGELNGQGIFKTTE-LIISGEFIDGELSGQV 376
+ G F++ EKNG+G ++ DG+ +EG + D L GQG++ + ++ G ++DGEL+G
Sbjct: 90 FEGNFVHGEKNGRGKFFFFDGSTLEGYYVDDALQGQGVYTYEDGGVLQGTYVDGELNGPA 149
Query: 377 EEIDKETGKLVFKGEYSQGQRHGRGKLIMIEDGGELTG 490
+E D + G+L+FKG+Y RHG I DGG L G
Sbjct: 150 QEYDTD-GRLIFKGQYKDNIRHG-VCWIYYPDGGSLVG 185
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,752,280,864
Number of extensions: 34834193
Number of successful extensions: 98009
Number of sequences better than 10.0: 310
Number of HSP's gapped: 96953
Number of HSP's successfully gapped: 782
Length of query: 426
Length of database: 1,040,966,779
Length adjustment: 131
Effective length of query: 295
Effective length of database: 621,205,444
Effective search space: 183255605980
Effective search space used: 183255605980
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
1 |
| VH (FL, L) |
0 |
| VF (FL, S) |
1 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
1 |
| CH (FL, L) |
0 |
| CF (FL, S) |
1 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |