>Contig-U07966-1 (Contig-U07966-1Q) /CSM_Contig/Contig-U07966-1Q.Seq.d
GTCTTTGTTAAAAACTTATCGTCACAATTCAAGTTTTTTTTTTTTTTTTT
TTTTTATTTCACTCTCTTTTTTTCTATTTTTTTATTTTTTTAAATAGTTC
TTTTTTATATAAAAGTAAAAGAAAACAATAAAATAAATAAATAAATAAAC
AAAACAAAGTAAAATAACCGCAAAAATTAAAAAATAAAATAATAAAAAAA
ATTTTTTTTTTAAAAAATTTAAAAAATTAAAAAAACTACAACAGTAACAG
ATTTTTTAAAAGTGTAGATAATATAACAATAAACATATTCAATTGTACAC
TACTCATTATATTGACACAAATATAAACATCACCAATACAGATCAATAAG
CATAATTGTAGATAATAATAATAATAACAAAAATATAAAANATAAAAATA
AAAACTACTAAAAACAAATAATAAAACTATAAATATAAAAACAAAAATAA
TATACATATATATATATAT----------CGAGCCAGTGCCATGGTACTC
AAATATACCACAAAAAATTAAAAACTCTATGAGTAAAGAAACAATCACAA
TTTTAATTTATGTAGTTTTATATGTTACCTCTGGTGTAATCAATAGTGTT
TTATTAAAAAAAGTTATGAACAAATTTACAAATTATGCATTTTTCCTTAG
TCAATTGACAAATTTTGGTTATGTACCAATTTTTGGAGCAGTAACAGCAT
ATAAGATTTTCTTTACAAAGGATATCCCGCAAGAAACAAGAGATTTCCCA
ACACGTAAATTTGCAATTATGGGTGCATTGGATGCAATTACAGGTTTCTT
TGTAGTTATTGGTGGTGTTTCAACATCAGGTCCATTACAACAATTATTGA
ATCAAGCTATCATTCCATTTACAATGATTGCCTCCTTCATTTTCTTATAG
GTACGTTATTCATTAATTCAATTGGGTGGTGCTTTGGTTATTATTGGTGG
TGTTGTCACCTCTTTAATTCCTTCTTTACTTGGTGGTTCTTCAGGTGGTA
ATAAACCATTTTGGAATTTCTTTTATTTATTATCTGTAATTCCTGGTGCA
CTTTCAAATGTTTATAAAGATATTGGTTTCCAAGCAGTTGCAGATATGGA
TGTTTGGTATTTACAATATTGGGATTCATTATATCAATCAATTTTTGGTC
TTTTCCTTTTCCCAGTTAATAATTGGTTACCACCACCAGCTACTGTTAAA
TTTGAACAAATTTTACCATTTATGAAAGAAGGTGCAGAATGTTTAGCTGG
TATTAATTCAATTATACCATCATATATTAATGGAACATCATCATTTACAG
CAACTTCATGTACTTATGCACCAGATGCAACCATTACTTGTGATGATTGT
CATAATGCATGGATTGTTATTATTTTATATATGACTATCAATATCATTTA
TAATATTTTCATTTTGTTAGTATTGAAACATGCAGGTGCAACCGTTTATT
CAATTGCCAATACCCTTCGTTTACCATTGACCAATATTGTTTTCTCAATT
CATTTCATTATGGGCTCTGCTGTATCTCCATTCTCTGGATTGTCCGTTGC
GGGTCTAGTCATTATTTTAGTGGGTCTAGGTGGTTATCGTGTTGGTTCAA
TGATCAAACAAAAGAAAGCTGCTGCCGCTGGTGGTGCTATGTAAGTTATA
CCATCGTATGGACCTGCAGGTATGGATAATATTATACCAGTTCAAAAAGA
ATATATTGAACCAAAGAGTCAAGCTCACTTAAGAAATCAATTCTTTGGTA
AATTAGGTATCAATGTTCCTGAGGCAAGATATAGAGCTGCTAATAATAAT
AATTATGGTGATGCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAT
AAATAATAAATAATATAATATATATAATTAATTTATAATAGTTAATATTA
AAAATAAAAAATAAAATAAAATAAAATAAAAAAAAAATAAA

est1=SSA662F,1,470
est2=SSA249F,14,253
est3=SSF486F,112,388
est4=SFK203F,471,833
est5=SFI792F,508,1104
est6=SFI892F,508,1155
est7=SLB631F,643,1017
est8=SFI792Z,1108,1787
est9=SSA662Z,1159,1822
est10=SSG209Z,1198,1815
est11=SSB404Z,1311,1814
est12=SLB631Z,1320,1814
est13=SSF486Z,1692,1933
est14=SSF504Z,1716,1914
est15=SSF794Z,1717,1914

lc*klivtiqvfffffflfhslffyffiflnssflykskrkq*nk*inkqnkvk*pqklk
nkiikkifflknlkn*knynsnrffksvdnitinifnctlliiltqi*tspiqinkhncr
*****qkykx*k*KLLKTNNKTINIKTKIIYIYIY---

---EPVPWYSNIPQKIKNSMSKETITILIYVVLYVTSGVINSVLLKKVMNKFTNYAFFLS
QLTNFGYVPIFGAVTAYKIFFTKDIPQETRDFPTRKFAIMGALDAITGFFVVIGGVSTSG
PLQQLLNQAIIPFTMIASFIFL*vrysliqlggalviiggvvtslipsllggssggnkpf
wnffyllsvipgalsnvykdigfqavadmdvwylqywdslyqsifglflfpvnnwlpppa
tvkfeqilpfmkegaeclaginsiipsyingtssftatsctyapdatitcddchnawivi
ilymtiniiynifillvlkhagatvysiantlrlpltnivfsihfimgsavspfsglsva
glviilvglggyrvgsmikqkkaaaaggam*vipsygpagmdniipvqkeyiepksqahl
rnqffgklginvpearyraannnnygda*kkkkkkkkkiinnk*yniyn*fiivniknkk
*nkik*kknk

Frame A:
vfvknlssqfkfffffffyftlffsiflff*ivlfyikvkennkink*inktk*nnrkn*
kik**kkfff*ki*kikktttvtdflkv*ii*q*tysivhysly*hkykhhqyrsisiiv
dnnnnnknikxknkny*kqiikl*i*kqk*ytyiyi---

---rasamvlkyttkn*klye*rnnhnfnlcsficylwcnq*cfikksyeqiyklcifp*
sidkfwlctnfwssnsi*dflykgyparnkrfpnt*icnygcigcnyrflcsywwcfnir
sittiiessyhsiyndcllhfligtlfinsigwcfgyywwcchlfnsfftwwffrw**ti
lefllfiicnswctfkcl*rywfpsscrygclvftilgfiisinfwsfpfps**lvttts
yc*i*tnftiyerrcrmfswy*fnytiiy*wniiiysnfmylctrcnhyl**ls*cmdcy
yfiydyqyhl*yfhfvsietcrcnrlfncqypsftidqycflnsfhyglccisilwivrc
gsshyfsgsrwlscwfndqtkesccrwwcyvsytivwtcryg*yytsskriy*tkesssl
kksilw*iryqcs*gki*sc****lw*clkkkkkkkkknnk**ii*yi*liyns*y*k*k
ik*nkikkk*

Frame B:
sllktyrhnssfffffffislsfflffyffk*fffi*k*kktik*ink*tkqskitakik
k*nnkknfffkkfkklkklqq*qif*kcr*ynnkhiqlytthyidtninitntdq*a*l*
iiiiitki*xikikttknk**nykyknknnihiyiy---

---EPVPWYSNIPQKIKNSMSKETITILIYVVLYVTSGVINSVLLKKVMNKFTNYAFFLS
QLTNFGYVPIFGAVTAYKIFFTKDIPQETRDFPTRKFAIMGALDAITGFFVVIGGVSTSG
PLQQLLNQAIIPFTMIASFIFL*vrysliqlggalviiggvvtslipsllggssggnkpf
wnffyllsvipgalsnvykdigfqavadmdvwylqywdslyqsifglflfpvnnwlpppa
tvkfeqilpfmkegaeclaginsiipsyingtssftatsctyapdatitcddchnawivi
ilymtiniiynifillvlkhagatvysiantlrlpltnivfsihfimgsavspfsglsva
glviilvglggyrvgsmikqkkaaaaggam*vipsygpagmdniipvqkeyiepksqahl
rnqffgklginvpearyraannnnygda*kkkkkkkkkiinnk*yniyn*fiivniknkk
*nkik*kknk

Frame C:
lc*klivtiqvfffffflfhslffyffiflnssflykskrkq*nk*inkqnkvk*pqklk
nkiikkifflknlkn*knynsnrffksvdnitinifnctlliiltqi*tspiqinkhncr
*****qkykx*k*KLLKTNNKTINIKTKIIYIYIY---

---sqchgtqiyhkklktl*vkkqsqf*fm*fymlplv*sivfy*kkl*tnlqimhfslv
n*qilvmyqfleq*qhirfslqrisrkkqeisqhvnlqlwvhwmqlqvsl*llvvfqhqv
hynny*iklsfhlq*lppsfsyryvih*fnwvvlwlllvvlspl*fllylvvlqvvinhf
gisfiyyl*flvhfqmfikilvskqlqiwmfgiynigihyinqflvfsfsqliigyhhql
llnlnkfyhl*kkvqnv*lvliqlyhhilmehhhlqqlhvlmhqmqpllvmivimhglll
fyi*lsisfiifsfc*y*nmqvqpfiqlpipfvyh*pilfsqfislwallylhsldcplr
v*slf*wv*vvivlvq*snkrkllplvvlcklyhrmdlqvwiilyqfkknilnqrvklt*
einslvn*vsmflrqdielliiiimvmlkkkkkkkkkk**iinniiyiinl**lilkikn
kik*nkkki

Query= Contig-U07966-1 (Contig-U07966-1Q)
/CSM_Contig/Contig-U07966-1Q.Seq.d
         (1941 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U07966-1 (Contig-U07966-1Q) /CSM_Contig/Conti...  2520  0.0
Contig-U12817-1 (Contig-U12817-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U11922-1 (Contig-U11922-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U09658-1 (Contig-U09658-1Q) /CSM_Contig/Conti...    40  0.009
Contig-U14688-1 (Contig-U14688-1Q) /CSM_Contig/Conti...    38  0.035
Contig-U13455-1 (Contig-U13455-1Q) /CSM_Contig/Conti...    38  0.035
Contig-U13371-1 (Contig-U13371-1Q) /CSM_Contig/Conti...    38  0.035
Contig-U10719-1 (Contig-U10719-1Q) /CSM_Contig/Conti...    38  0.035
Contig-U13156-1 (Contig-U13156-1Q) /CSM_Contig/Conti...    36  0.14
Contig-U11541-1 (Contig-U11541-1Q) /CSM_Contig/Conti...    36  0.14

>Contig-U07966-1 (Contig-U07966-1Q) /CSM_Contig/Contig-U07966-1Q.Seq.d
          Length = 1941

 Score = 2520 bits (1271), Expect = 0.0
 Identities = 1285/1292 (99%)
 Strand = Plus / Plus

                                                                        
Query: 525  ctctatgagtaaagaaacaatcacaattttaatttatgtagttttatatgttacctctgg 584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525  ctctatgagtaaagaaacaatcacaattttaatttatgtagttttatatgttacctctgg 584

                                                                        
Query: 585  tgtaatcaatagtgttttattnnnnnnngttatgaacaaatttacaaattatgcattttt 644
            |||||||||||||||||||||       ||||||||||||||||||||||||||||||||
Sbjct: 585  tgtaatcaatagtgttttattaaaaaaagttatgaacaaatttacaaattatgcattttt 644

                                                                        
Query: 645  ccttagtcaattgacaaattttggttatgtaccaatttttggagcagtaacagcatataa 704
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645  ccttagtcaattgacaaattttggttatgtaccaatttttggagcagtaacagcatataa 704

                                                                        
Query: 705  gattttctttacaaaggatatcccgcaagaaacaagagatttcccaacacgtaaatttgc 764
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705  gattttctttacaaaggatatcccgcaagaaacaagagatttcccaacacgtaaatttgc 764

                                                                        
Query: 765  aattatgggtgcattggatgcaattacaggtttctttgtagttattggtggtgtttcaac 824
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765  aattatgggtgcattggatgcaattacaggtttctttgtagttattggtggtgtttcaac 824

                                                                        
Query: 825  atcaggtccattacaacaattattgaatcaagctatcattccatttacaatgattgcctc 884
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825  atcaggtccattacaacaattattgaatcaagctatcattccatttacaatgattgcctc 884

                                                                        
Query: 885  cttcattttcttataggtacgttattcattaattcaattgggtggtgctttggttattat 944
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885  cttcattttcttataggtacgttattcattaattcaattgggtggtgctttggttattat 944

                                                                        
Query: 945  tggtggtgttgtcacctctttaattccttctttacttggtggttcttcaggtggtaataa 1004
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 945  tggtggtgttgtcacctctttaattccttctttacttggtggttcttcaggtggtaataa 1004

                                                                        
Query: 1005 accattttggaatttcttttatttattatctgtaattcctggtgcactttcaaatgttta 1064
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1005 accattttggaatttcttttatttattatctgtaattcctggtgcactttcaaatgttta 1064

                                                                        
Query: 1065 taaagatattggtttccaagcagttgcagatatggatgtttggtatttacaatattggga 1124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1065 taaagatattggtttccaagcagttgcagatatggatgtttggtatttacaatattggga 1124

                                                                        
Query: 1125 ttcattatatcaatcaatttttggtcttttccttttcccagttaataattggttaccacc 1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1125 ttcattatatcaatcaatttttggtcttttccttttcccagttaataattggttaccacc 1184

                                                                        
Query: 1185 accagctactgttaaatttgaacaaattttaccatttatgaaagaaggtgcagaatgttt 1244
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1185 accagctactgttaaatttgaacaaattttaccatttatgaaagaaggtgcagaatgttt 1244

                                                                        
Query: 1245 agctggtattaattcaattataccatcatatattaatggaacatcatcatttacagcaac 1304
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1245 agctggtattaattcaattataccatcatatattaatggaacatcatcatttacagcaac 1304

                                                                        
Query: 1305 ttcatgtacttatgcaccagatgcaaccattacttgtgatgattgtcataatgcatggat 1364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1305 ttcatgtacttatgcaccagatgcaaccattacttgtgatgattgtcataatgcatggat 1364

                                                                        
Query: 1365 tgttattattttatatatgactatcaatatcatttataatattttcattttgttagtatt 1424
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1365 tgttattattttatatatgactatcaatatcatttataatattttcattttgttagtatt 1424

                                                                        
Query: 1425 gaaacatgcaggtgcaaccgtttattcaattgccaatacccttcgtttaccattgaccaa 1484
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1425 gaaacatgcaggtgcaaccgtttattcaattgccaatacccttcgtttaccattgaccaa 1484

                                                                        
Query: 1485 tattgttttctcaattcatttcattatgggctctgctgtatctccattctctggattgtc 1544
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1485 tattgttttctcaattcatttcattatgggctctgctgtatctccattctctggattgtc 1544

                                                                        
Query: 1545 cgttgcgggtctagtcattattttagtgggtctaggtggttatcgtgttggttcaatgat 1604
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1545 cgttgcgggtctagtcattattttagtgggtctaggtggttatcgtgttggttcaatgat 1604

                                                                        
Query: 1605 caaacaaaagaaagctgctgccgctggtggtgctatgtaagttataccatcgtatggacc 1664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1605 caaacaaaagaaagctgctgccgctggtggtgctatgtaagttataccatcgtatggacc 1664

                                                                        
Query: 1665 tgcaggtatggataatattataccagttcaaaaagaatatattgaaccaaagagtcaagc 1724
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1665 tgcaggtatggataatattataccagttcaaaaagaatatattgaaccaaagagtcaagc 1724

                                                                        
Query: 1725 tcacttaagaaatcaattctttggtaaattaggtatcaatgttcctgaggcaagatatag 1784
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1725 tcacttaagaaatcaattctttggtaaattaggtatcaatgttcctgaggcaagatatag 1784

                                            
Query: 1785 agctgctaataataataattatggtgatgctt 1816
            ||||||||||||||||||||||||||||||||
Sbjct: 1785 agctgctaataataataattatggtgatgctt 1816


 Score =  192 bits (97), Expect = 1e-48
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                       
Query: 236 ctacaacagtaacagattttttaaaagtgtagataatataacaataaacatattcaattg 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 ctacaacagtaacagattttttaaaagtgtagataatataacaataaacatattcaattg 295

                                                
Query: 296 tacactactcattatattgacacaaatataaacatca 332
           |||||||||||||||||||||||||||||||||||||
Sbjct: 296 tacactactcattatattgacacaaatataaacatca 332


 Score = 65.9 bits (33), Expect = 2e-10
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 1  gtctttgttaaaaacttatcgtcacaattcaag 33
          |||||||||||||||||||||||||||||||||
Sbjct: 1  gtctttgttaaaaacttatcgtcacaattcaag 33


 Score = 63.9 bits (32), Expect = 6e-10
 Identities = 32/32 (100%)
 Strand = Plus / Plus

                                           
Query: 480 cgagccagtgccatggtactcaaatataccac 511
           ||||||||||||||||||||||||||||||||
Sbjct: 480 cgagccagtgccatggtactcaaatataccac 511


>Contig-U12817-1 (Contig-U12817-1Q) /CSM_Contig/Contig-U12817-1Q.Seq.d
          Length = 2530

 Score = 42.1 bits (21), Expect = 0.002
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 981  tggtggttcttcaggtggtaataaa 1005
            |||||||| ||||||||||||||||
Sbjct: 975  tggtggttattcaggtggtaataaa 999


>Contig-U11922-1 (Contig-U11922-1Q) /CSM_Contig/Contig-U11922-1Q.Seq.d
          Length = 1805

 Score = 42.1 bits (21), Expect = 0.002
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 981  tggtggttcttcaggtggtaataaa 1005
            |||||||| ||||||||||||||||
Sbjct: 1352 tggtggttattcaggtggtaataaa 1376


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 36,946
Number of Sequences: 6905
Number of extensions: 36946
Number of successful extensions: 9775
Number of sequences better than 10.0: 446
length of query: 1941
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1925
effective length of database: 5,564,391
effective search space: 10711452675
effective search space used: 10711452675
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U07966-1 (Contig-U07966-1Q) /CSM_Contig/Contig-U07966-1Q.Seq.d
         (1941 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AF317500) Dictyostelium discoideum strain AX4 putative tran...  2351   0.0    3
(C83926) Dictyostelium discoideum slug cDNA, clone SSA662.       1255   0.0    1
(BJ402962) Dictyostelium discoideum cDNA clone:dds18h23, 3' ...  1247   0.0    3
(C89829) Dictyostelium discoideum slug cDNA, clone SSG209.       1193   0.0    1
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...  1164   0.0    1
(BJ389462) Dictyostelium discoideum cDNA clone:dds18h24, 5' ...  1078   0.0    2
(BJ389461) Dictyostelium discoideum cDNA clone:dds18h23, 5' ...   977   0.0    2
(AU033935) Dictyostelium discoideum slug cDNA, clone SLB631.      952   0.0    1
(AU037083) Dictyostelium discoideum slug cDNA, clone SSB404.      781   0.0    2
(AU060831) Dictyostelium discoideum slug cDNA, clone SLB631.      743   0.0    1
(BJ390060) Dictyostelium discoideum cDNA clone:dds21e02, 5' ...   456   e-178  3
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    80   3e-62  12
(AU076370) Dictyostelium discoideum slug cDNA, clone SSA662.      196   8e-58  3
(C93023) Dictyostelium discoideum slug cDNA, clone SSF486.        218   6e-52  1
(AU072937) Dictyostelium discoideum slug cDNA, clone SSF486.      196   2e-45  1
(C92851) Dictyostelium discoideum slug cDNA, clone SSF504.        182   3e-41  1
(C93093) Dictyostelium discoideum slug cDNA, clone SSF794.        180   1e-40  1
(CP000487) Campylobacter fetus subsp. fetus 82-40, complete ...    56   0.005  1
(AU075100) Dictyostelium discoideum slug cDNA, clone SSA249.       40   0.045  2
(BX571776) Zebrafish DNA sequence from clone CH211-139K15 in...    44   0.20   6
(U49822) Saccharomyces douglasii mitochondrial tRNA-Ser and ...    34   0.23   2
(EK381230) 1095469462378 Global-Ocean-Sampling_GS-31-01-01-1...    38   0.62   3
(AE014832) Plasmodium falciparum 3D7 chromosome 10 section 4...    40   0.91   10
(AE014851) Plasmodium falciparum 3D7 chromosome 12, section ...    36   1.2    11
(AC156167) Bos taurus clone CH240-52O10, WORKING DRAFT SEQUE...    48   1.3    1
(CU861473) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    48   1.3    1
(AC187037) Zea mays chromosome 8 clone CH201-1M7; ZMMBBc0001...    48   1.3    1
(AC169555) Bos taurus clone CH240-225N21, WORKING DRAFT SEQU...    48   1.3    1
(CP000724) Alkaliphilus metalliredigens QYMF, complete genome.     48   1.3    1
(AL845513) Zebrafish DNA sequence from clone CH211-13O4 in l...    42   1.6    5
(AC144822) Danio rerio clone CH211-13O4, complete sequence.        42   1.6    5
(AC090075) Homo sapiens chromosome 5 clone RP11-46G7, WORKIN...    40   1.6    8
(EL574295) Physarum08542 Physarum polycephalum starvation st...    38   2.0    2
(EL566630) Physarum08540 Physarum polycephalum starvation st...    38   2.0    2
(EL570625) Physarum02155 Physarum polycephalum starvation st...    38   2.1    2
(EL566296) Physarum08541 Physarum polycephalum starvation st...    38   2.2    2
(EJ060463) 1095456060309 Global-Ocean-Sampling_GS-26-01-01-1...    36   2.2    3
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s...    34   3.2    12
(ER529055) 1093015734556 Global-Ocean-Sampling_GS-35-01-01-1...    34   3.3    2
(EJ626727) 1092963192661 Global-Ocean-Sampling_GS-29-01-01-1...    36   3.3    2
(EJ201073) 1092344299587 Global-Ocean-Sampling_GS-27-01-01-1...    36   3.3    2
(ER341916) 1092344352378 Global-Ocean-Sampling_GS-34-01-01-1...    36   3.3    2
(AZ123638) RPCI-23-1O22.TV RPCI-23 Mus musculus genomic clon...    36   3.4    2
(CU075415) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   4.0    11
(AM432598) Vitis vinifera contig VV78X035008.7, whole genome...    42   4.5    4
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875...    38   4.6    7
(BJ391951) Dictyostelium discoideum cDNA clone:dds25f22, 5' ...    30   5.0    4
(BK006463) TPA_exp: Mus musculus chromosome 10 piRNA (mpiR) ...    46   5.0    1
(BV539874) G591P643614FH8.T0 Clint Pan troglodytes verus STS...    46   5.0    1
(BV519117) G591P66813FE5.T0 Clint Pan troglodytes verus STS ...    46   5.0    1
(BV505432) qqs83f09.g1 Clint Pan troglodytes verus STS genom...    46   5.0    1
(AC158630) Mus musculus 10 BAC RP23-440F7 (Roswell Park Canc...    46   5.0    1
(BS000015) Pan troglodytes chromosome 22 clone:PTB-017F24, m...    46   5.0    1
(DI084787) Enterococcus faecalis polynucleotides and polypep...    46   5.0    1
(BD193411) Enterococcus faecialis polynucleotides and polype...    46   5.0    1
(AR394148) Sequence 163 from patent US 6617156.                    46   5.0    1
(AL929354) Plasmodium falciparum strain 3D7, chromosome 5, s...    46   5.0    1
(AJ487482) Heliothis virescens partial mRNA for putative che...    46   5.0    1
(AL163208) Homo sapiens chromosome 21 segment HS21C008.            46   5.0    1
(AL136129) Human DNA sequence from clone RP11-417E7 on chrom...    46   5.0    1
(AF222684) Homo sapiens chromosome 21 BAC B194B7 map 21q11.2...    46   5.0    1
(AC119450) Rattus norvegicus clone CH230-196P20, *** SEQUENC...    46   5.0    1
(AC112858) Rattus norvegicus clone CH230-173M21, WORKING DRA...    46   5.0    1
(AC095514) Rattus norvegicus clone CH230-8N6, WORKING DRAFT ...    46   5.0    1
(CU914368) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   5.0    1
(AC026382) Mus musculus clone RP23-246G10, WORKING DRAFT SEQ...    46   5.0    1
(CU468866) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   5.0    1
(AL353694) Human DNA sequence *** SEQUENCING CANCELLED *** f...    46   5.0    1
(AZ684750) ENTLQ06TF Entamoeba histolytica Sheared DNA Entam...    46   5.0    1
(ET692424) CHO_OF332xf07r1.ab1 CHO_OF Nicotiana tabacum geno...    46   5.0    1
(ER825483) PPTBK76TR Solanum tuberosum RHPOTKEY BAC ends Sol...    46   5.0    1
(ER824723) PPTF909TR Solanum tuberosum RHPOTKEY BAC ends Sol...    46   5.0    1
(EI338282) GM_WBc0081A19.r GM_WBc Glycine max genomic clone ...    46   5.0    1
(EI324661) GM_WBc0061G05.r GM_WBc Glycine max genomic clone ...    46   5.0    1
(DU016733) 239272 Tomato MboI BAC Library Solanum lycopersic...    46   5.0    1
(CG823772) SOYEO16TV LargeInsertSoybeanGenLib Glycine max ge...    46   5.0    1
(CV531585) LVS_004_F04 Phaseolus vulgaris leaf EST library P...    46   5.0    1
(FE699055) Pv024C_M13F_F07.ab1 Phaseolus vulgaris cv Early g...    46   5.0    1
(EY819433) PT11-C1-901-008-B08-CT.F Poncirus trifoliata leaf...    46   5.0    1
(AE016830) Enterococcus faecalis V583, complete genome.            46   5.0    1
(AU061408) Dictyostelium discoideum slug cDNA, clone SLE134.       30   5.4    4
(AC151778) Ornithorhynchus anatinus chromosome UNK clone OAB...    38   5.5    5
(CO913266) USDA-FP_11360 Rough Lemon seedling root Citrus ja...    44   6.2    2
(EC825916) SME00009117 esmbsro2 Sawyeria marylandensis cDNA,...    38   7.2    2
(AM429926) Vitis vinifera contig VV78X162021.9, whole genome...    34   7.4    5
(AM623839) Entamoeba dispar GSS, clone dispar104a05.q1k.           38   7.9    2
(AC005140) Plasmodium falciparum chromosome 12 clone 3D7, **...    36   8.0    10
(AC220365) Bos taurus clone CH240-360N3, WORKING DRAFT SEQUE...    40   9.7    7

>(AF317500) Dictyostelium discoideum strain AX4 putative transporter
            protein SSA662 (ssa662) mRNA, complete cds.
          Length = 1945

 Score = 2351 bits (1186), Expect(3) = 0.0
 Identities = 1199/1204 (99%)
 Strand = Plus / Plus


Query: 613  gttatgaacaaatttacaaattatgcatttttccttagtcaattgacaaattttggttat 672
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712  gttatgaacaaatttacaaattatgcatttttccttagtcaattgacaaattttggttat 771


Query: 673  gtaccaatttttggagcagtaacagcatataagattttctttacaaaggatatcccgcaa 732
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772  gtaccaatttttggagcagtaacagcatataagattttctttacaaaggatatcccgcaa 831


Query: 733  gaaacaagagatttcccaacacgtaaatttgcaattatgggtgcattggatgcaattaca 792
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832  gaaacaagagatttcccaacacgtaaatttgcaattatgggtgcattggatgcaattaca 891


Query: 793  ggtttctttgtagttattggtggtgtttcaacatcaggtccattacaacaattattgaat 852
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ggtttctttgtagttattggtggtgtttcaacatcaggtccattacaacaattattgaat 951


Query: 853  caagctatcattccatttacaatgattgcctccttcattttcttataggtacgttattca 912
            ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 952  caagctatcattccatttacaatgattgcctccttcattttcttaaaggaacgttattca 1011


Query: 913  ttaattcaattgggtggtgctttggttattattggtggtgttgtcacctctttaattcct 972
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 ttaattcaattgggtggtgctttggttattattggtggtgttgtcacctctttaattcct 1071


Query: 973  tctttacttggtggttcttcaggtggtaataaaccattttggaatttcttttatttatta 1032
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 tctttacttggtggttcttcaggtggtaataaaccattttggaatttcttttatttatta 1131


Query: 1033 tctgtaattcctggtgcactttcaaatgtttataaagatattggtttccaagcagttgca 1092
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 tctgtaattcctggtgcactttcaaatgtttataaagatattggtttccaagcagttgca 1191


Query: 1093 gatatggatgtttggtatttacaatattgggattcattatatcaatcaatttttggtctt 1152
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1192 gatatggatgtttggtatttacaatattgggattcattatatcaatcaatttttggtctt 1251


Query: 1153 ttccttttcccagttaataattggttaccaccaccagctactgttaaatttgaacaaatt 1212
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1252 ttccttttcccagttaataattggttaccaccaccagctactgttaaatttgaacaaatt 1311


Query: 1213 ttaccatttatgaaagaaggtgcagaatgtttagctggtattaattcaattataccatca 1272
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1312 ttaccatttatgaaagaaggtgcagaatgtttagctggtattaattcaattataccatca 1371


Query: 1273 tatattaatggaacatcatcatttacagcaacttcatgtacttatgcaccagatgcaacc 1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1372 tatattaatggaacatcatcatttacagcaacttcatgtacttatgcaccagatgcaacc 1431


Query: 1333 attacttgtgatgattgtcataatgcatggattgttattattttatatatgactatcaat 1392
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1432 attacttgtgatgattgtcataatgcatggattgttattattttatatatgactatcaat 1491


Query: 1393 atcatttataatattttcattttgttagtattgaaacatgcaggtgcaaccgtttattca 1452
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1492 atcatttataatattttcattttgttagtattgaaacatgcaggtgcaaccgtttattca 1551


Query: 1453 attgccaatacccttcgtttaccattgaccaatattgttttctcaattcatttcattatg 1512
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1552 attgccaatacccttcgtttaccattgaccaatattgttttctcaattcatttcattatg 1611


Query: 1513 ggctctgctgtatctccattctctggattgtccgttgcgggtctagtcattattttagtg 1572
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1612 ggctctgckgtatctccattctctggattgtccgttgcgggtctagtcattattttagtg 1671


Query: 1573 ggtctaggtggttatcgtgttggttcaatgatcaaacaaaagaaagctgctgccgctggt 1632
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1672 ggtctaggtggttatcgtgttggttcaatgatcaaacaaaagaaagctgctgccgctggt 1731


Query: 1633 ggtgctatgtaagttataccatcgtatggacctgcaggtatggataatattataccagtt 1692
            ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1732 ggtgctattaaagttataccatcgtatggacctgcaggtatggataatattataccagtt 1791


Query: 1693 caaaaagaatatattgaaccaaagagtcaagctcacttaagaaatcaattctttggtaaa 1752
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1792 caaaaagaatatattgaaccaaagagtcaagctcacttaagaaatcaattctttggtaaa 1851


Query: 1753 ttaggtatcaatgttcctgaggcaagatatagagctgctaataataataattatggtgat 1812
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1852 ttaggtatcaatgttcctgaggcaagatatagagctgctaataataataattatggtgat 1911


Query: 1813 gctt 1816
            ||||
Sbjct: 1912 gctt 1915

 Score =  161 bits (81), Expect(3) = 0.0
 Identities = 81/81 (100%)
 Strand = Plus / Plus


Query: 525 ctctatgagtaaagaaacaatcacaattttaatttatgtagttttatatgttacctctgg 584
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctctatgagtaaagaaacaatcacaattttaatttatgtagttttatatgttacctctgg 683


Query: 585 tgtaatcaatagtgttttatt 605
           |||||||||||||||||||||
Sbjct: 684 tgtaatcaatagtgttttatt 704

 Score = 63.9 bits (32), Expect(3) = 0.0
 Identities = 32/32 (100%)
 Strand = Plus / Plus


Query: 480 cgagccagtgccatggtactcaaatataccac 511
           ||||||||||||||||||||||||||||||||
Sbjct: 579 cgagccagtgccatggtactcaaatataccac 610

 Score =  196 bits (99), Expect(3) = 4e-57
 Identities = 99/99 (100%)
 Strand = Plus / Plus


Query: 236 ctacaacagtaacagattttttaaaagtgtagataatataacaataaacatattcaattg 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ctacaacagtaacagattttttaaaagtgtagataatataacaataaacatattcaattg 311


Query: 296 tacactactcattatattgacacaaatataaacatcacc 334
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tacactactcattatattgacacaaatataaacatcacc 350

 Score = 65.9 bits (33), Expect(3) = 4e-57
 Identities = 33/33 (100%)
 Strand = Plus / Plus


Query: 1  gtctttgttaaaaacttatcgtcacaattcaag 33
          |||||||||||||||||||||||||||||||||
Sbjct: 17 gtctttgttaaaaacttatcgtcacaattcaag 49

 Score = 28.2 bits (14), Expect(3) = 4e-57
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 806  ttattggtggtgtt 819
            ||||||||||||||
Sbjct: 1040 ttattggtggtgtt 1053

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,846,084,752
Number of extensions: 120887777
Number of successful extensions: 12819792
Number of sequences better than 10.0: 88
Length of query: 1941
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1917
Effective length of database: 97,308,875,965
Effective search space: 186541115224905
Effective search space used: 186541115224905
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U07966-1 (Contig-U07966-1Q) /CSM_Contig/Contig-U07966-1Q.Seq.d
         (1941 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX538353_53(BX538353|pid:none) Cryptosporidium parvum chromosome...   149   5e-34
EU333971_1(EU333971|pid:none) Plasmodium vivax isolate MCQS3 put...    91   2e-16
AF030694_8(AF030694|pid:none) Plasmodium falciparum strain Dd2 h...    91   2e-16
AF233064_1(AF233064|pid:none) Plasmodium falciparum clone DIV30 ...    91   2e-16
AF233066_1(AF233066|pid:none) Plasmodium falciparum isolate NF54...    90   3e-16
EU333967_1(EU333967|pid:none) Plasmodium vivax isolate MCQR1 put...    90   3e-16
DQ156108_1(DQ156108|pid:none) Plasmodium falciparum strain TU741...    89   6e-16
DQ156109_1(DQ156109|pid:none) Plasmodium falciparum strain TA618...    89   6e-16
AF468006_1(AF468006|pid:none) Plasmodium falciparum isolate TM6 ...    89   7e-16
AF314646_1(AF314646|pid:none) Plasmodium knowlesi putative trans...    89   7e-16
AY651315_1(AY651315|pid:none) Plasmodium falciparum isolate 2300...    88   1e-15
AF495376_1(AF495376|pid:none) Plasmodium falciparum clone K1H6/2...    88   1e-15
EU333972_1(EU333972|pid:none) Plasmodium vivax isolate MCQS8 put...    88   1e-15
AF233065_1(AF233065|pid:none) Plasmodium falciparum clone 106/1 ...    88   1e-15
AC136507_22(AC136507|pid:none) Medicago truncatula clone mth2-24...    87   2e-15
AK176437_1(AK176437|pid:none) Arabidopsis thaliana mRNA, complet...    85   1e-14
AY085588_1(AY085588|pid:none) Arabidopsis thaliana clone 158575 ...    84   2e-14
BT029172_1(BT029172|pid:none) Arabidopsis thaliana At5g19380 mRN...    83   3e-14
CR940348_735(CR940348|pid:none) Theileria annulata strain Ankara...    82   7e-14
EU968453_1(EU968453|pid:none) Zea mays clone 320999 hypothetical...    81   1e-13
BT038773_1(BT038773|pid:none) Zea mays full-length cDNA clone ZM...    80   2e-13
AF314645_1(AF314645|pid:none) Plasmodium berghei putative transp...    79   8e-13
BT062665_1(BT062665|pid:none) Zea mays full-length cDNA clone ZM...    74   2e-11
EU966379_1(EU966379|pid:none) Zea mays clone 293999 hypothetical...    73   3e-11
AK109892_1(AK109892|pid:none) Oryza sativa Japonica Group cDNA c...    70   2e-10
AL078637_29(AL078637|pid:none) Arabidopsis thaliana DNA chromoso...    59   8e-07
AP004368_14(AP004368|pid:none) Oryza sativa Japonica Group genom...    55   7e-06
AK072933_1(AK072933|pid:none) Oryza sativa Japonica Group cDNA c...    52   1e-04
AM910983_71(AM910983|pid:none) Plasmodium knowlesi strain H chro...    45   0.007
AM430432_1(AM430432|pid:none) Vitis vinifera contig VV78X011732....    42   0.061
EU414205_1(EU414205|pid:none) Plasmodium berghei isolate TUMS/PB...    42   0.080
CR382122_282(CR382122|pid:none) Kluyveromyces lactis strain NRRL...    41   0.14
AC116960_56(AC116960|pid:none) Dictyostelium discoideum chromoso...    38   1.2
AY817036_1(AY817036|pid:none) Plasmodium falciparum strain FCR3S...    37   2.0
CP000140_1875(CP000140|pid:none) Parabacteroides distasonis ATCC...    36   4.4
AP008971_295(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,...    36   5.7
AY817027_1(AY817027|pid:none) Plasmodium falciparum strain Mad20...    35   7.5

>BX538353_53(BX538353|pid:none) Cryptosporidium parvum chromosome 6,
            complete sequence; segment 4/4.
          Length = 446

 Score =  149 bits (375), Expect = 5e-34
 Identities = 97/342 (28%), Positives = 163/342 (47%), Gaps = 16/342 (4%)
 Frame = +1

Query: 517  IKNSMS----------KETITILIYVVLYVTSGVINSVLLKKVMNKFTNYAFFLSQLTNF 666
            IKN MS          KE   +++ ++  + S V NSV  KK+ +   N+ +FL+QLT+
Sbjct: 25   IKNGMSALNEGVIKPCKENFFLIVCMMSLLISSVFNSVFFKKMTSAMPNHVWFLTQLTSA 84

Query: 667  GYVPIFGAVTAYKIFFTKDIPQETRDFPTRKFAIMGALDAITGFFVVIGGVSTSGPLQQL 846
             Y+P+FG V     +F  ++ ++  +FP  KF +MG  DA +    ++    TSG +Q +
Sbjct: 85   LYIPLFGLVLLIS-YFRGELSRDNLEFPMSKFWMMGFFDAFSSILTLLASTHTSGVMQVV 143

Query: 847  LNQAIIPFTM-----IASFIFL*VRYSXXXXXXXXXXXXXXXTXXXXXXXXXXXXXNKPF 1011
            L Q   P T+     I    F  ++Y                              N+
Sbjct: 144  LGQMCTPITLVMLSSICKDRFHKLQYIGATVMVMGIFIVKSTLILGIRKSSGAENSNQLI 203

Query: 1012 WNFFYLLSVIPGALSNVYKDIGFQAVADMDVWYLQYWDSLYQSIFGLFLFPVNNW-LPPP 1188
            +N  ++++ IP + S+VYKD+ F+  + ++  YLQ+  +  Q I G  L P+N+  +  P
Sbjct: 204  FNILFVIACIPASASSVYKDLSFREYSSLNENYLQFCVAATQVIIGFILVPINSLSILGP 263

Query: 1189 ATVKFEQILPFMKEGAECLAGINSIIPSYINGTSSFTATSCTYAPDATITCDDCHNAWIV 1368
              ++  QI   + +GA CL    + I     G             +    CD+C++A
Sbjct: 264  QKIEMNQIPSLLFDGANCLFLKRNSITESCGG-------------ELQRPCDNCNSAQFP 310

Query: 1369 IILYMTINIIYNIFILLVLKHAGATVYSIANTLRLPLTNIVF 1494
            +++Y   N+I N+F +LVLKH  A+   I +TLRLP+T +VF
Sbjct: 311  VLIYFIANVICNVFSVLVLKHGTASTGFIVSTLRLPVTTLVF 352

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 2,357,349,771
Number of extensions: 45718734
Number of successful extensions: 133945
Number of sequences better than 10.0: 37
Number of HSP's gapped: 133822
Number of HSP's successfully gapped: 59
Length of query: 647
Length of database: 1,040,966,779
Length adjustment: 135
Effective length of query: 512
Effective length of database: 608,388,304
Effective search space: 311494811648
Effective search space used: 311494811648
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.64  gvh: 0.54  alm: 0.27  top: 0.60  tms: 0.20  mit: 0.31  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 1.00  m_ : 0.00 

	 28.0 %: endoplasmic reticulum
	 20.0 %: plasma membrane
	 16.0 %: nuclear
	 16.0 %: vacuolar
	  8.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: cytoplasmic

>> prediction for Contig-U07966-1 is end