Contig-U07413-1
Contig ID Contig-U07413-1
Contig update 2002. 9.13
Contig sequence
>Contig-U07413-1 (Contig-U07413-1Q) /CSM_Contig/Contig-U07413-1Q.Seq.d
NNNNNNNNNNATAGGTGAATATCATNCCNCTNAAGATTTTCAAGTTTCAT
TGGGCGTTGAAANAATTAAATGTCCTGAAACTTTATTTCANCCNNAAGCA
ATCATTGGTGTGGATCAAATGGGTTTGGTTAAGGCTATTATCTCTTCAAT
TCTCTCCCAATTGCCAGTGGATACACGTAAATTGGTAACAGAGAATATCT
TCCTCACTGGTGGTAATGTAAATACTAAACNCTTTAAAGATAGAATTCAT
TATGAAATTCAACAAATTCGTGAACCATATTCACCTTTAACCATCTTAAA
ATCAAAAGACTCTCAATTGGATGCTTGGTTAGGTGCTAGAAAATGGTGTT
TAGATAATCAAG

Gap no gap
Contig length 362
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 703477
End point 703829
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U07413
List of clone(s)

est1=AFE229Z,1,353
Translated Amino Acid sequence
XXXIGEYHXXXDFQVSLGVEXIKCPETLFXPXAIIGVDQMGLVKAIISSILSQLPVDTRK
LVTENIFLTGGNVNTKXFKDRIHYEIQQIREPYSPLTILKSKDSQLDAWLGARKWCLDNQ


Translated Amino Acid sequence (All Frames)
Frame A:
xxxxr*isxxxrfssfigr*xn*ms*nfisxxsnhwcgsngfg*gyylfnslpiasgyt*
ignreylphww*cky*tl*r*nsl*nstns*tiftfnhlkikrlsigclvrc*kmvfr*s


Frame B:
XXXIGEYHXXXDFQVSLGVEXIKCPETLFXPXAIIGVDQMGLVKAIISSILSQLPVDTRK
LVTENIFLTGGNVNTKXFKDRIHYEIQQIREPYSPLTILKSKDSQLDAWLGARKWCLDNQ


Frame C:
xxx*vnixplkifkfhwalkxlnvlklyfxxkqslvwikwvwlrllslqfspncqwihvn
w*qrissslvvm*ilnxlkiefimkfnkfvnhihl*ps*nqktlnwmlg*vlengv*iik


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U07413-1 (Contig-U07413-1Q)
/CSM_Contig/Contig-U07413-1Q.Seq.d
(362 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U07413-1 (Contig-U07413-1Q) /CSM_Contig/Conti... 650 0.0
Contig-U12678-1 (Contig-U12678-1Q) /CSM_Contig/Conti... 36 0.025
Contig-U11536-1 (Contig-U11536-1Q) /CSM_Contig/Conti... 34 0.098
Contig-U06982-1 (Contig-U06982-1Q) /CSM_Contig/Conti... 34 0.098
Contig-U12683-1 (Contig-U12683-1Q) /CSM_Contig/Conti... 32 0.39
Contig-U12406-1 (Contig-U12406-1Q) /CSM_Contig/Conti... 32 0.39
Contig-U11889-1 (Contig-U11889-1Q) /CSM_Contig/Conti... 32 0.39
Contig-U11865-1 (Contig-U11865-1Q) /CSM_Contig/Conti... 32 0.39
Contig-U11802-1 (Contig-U11802-1Q) /CSM_Contig/Conti... 32 0.39
Contig-U09608-1 (Contig-U09608-1Q) /CSM_Contig/Conti... 32 0.39

>Contig-U07413-1 (Contig-U07413-1Q) /CSM_Contig/Contig-U07413-1Q.Seq.d
Length = 362

Score = 650 bits (328), Expect = 0.0
Identities = 352/352 (100%)
Strand = Plus / Plus


Query: 11 ataggtgaatatcatnccnctnaagattttcaagtttcattgggcgttgaaanaattaaa 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ataggtgaatatcatnccnctnaagattttcaagtttcattgggcgttgaaanaattaaa 70


Query: 71 tgtcctgaaactttatttcanccnnaagcaatcattggtgtggatcaaatgggtttggtt 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tgtcctgaaactttatttcanccnnaagcaatcattggtgtggatcaaatgggtttggtt 130


Query: 131 aaggctattatctcttcaattctctcccaattgccagtggatacacgtaaattggtaaca 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 aaggctattatctcttcaattctctcccaattgccagtggatacacgtaaattggtaaca 190


Query: 191 gagaatatcttcctcactggtggtaatgtaaatactaaacnctttaaagatagaattcat 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gagaatatcttcctcactggtggtaatgtaaatactaaacnctttaaagatagaattcat 250


Query: 251 tatgaaattcaacaaattcgtgaaccatattcacctttaaccatcttaaaatcaaaagac 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tatgaaattcaacaaattcgtgaaccatattcacctttaaccatcttaaaatcaaaagac 310


Query: 311 tctcaattggatgcttggttaggtgctagaaaatggtgtttagataatcaag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tctcaattggatgcttggttaggtgctagaaaatggtgtttagataatcaag 362


>Contig-U12678-1 (Contig-U12678-1Q) /CSM_Contig/Contig-U12678-1Q.Seq.d
Length = 1407

Score = 36.2 bits (18), Expect = 0.025
Identities = 21/22 (95%)
Strand = Plus / Minus


Query: 264 aaattcgtgaaccatattcacc 285
||||| ||||||||||||||||
Sbjct: 1198 aaatttgtgaaccatattcacc 1177


>Contig-U11536-1 (Contig-U11536-1Q) /CSM_Contig/Contig-U11536-1Q.Seq.d
Length = 1532

Score = 34.2 bits (17), Expect = 0.098
Identities = 17/17 (100%)
Strand = Plus / Minus


Query: 273 aaccatattcaccttta 289
|||||||||||||||||
Sbjct: 706 aaccatattcaccttta 690


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3229
Number of Sequences: 6905
Number of extensions: 3229
Number of successful extensions: 298
Number of sequences better than 10.0: 90
length of query: 362
length of database: 5,674,871
effective HSP length: 16
effective length of query: 346
effective length of database: 5,564,391
effective search space: 1925279286
effective search space used: 1925279286
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2008.11.11
Homology vs DNA
Query= Contig-U07413-1 (Contig-U07413-1Q) /CSM_Contig/Contig-U07413-1Q.Seq.d
(362 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ342057) Dictyostelium discoideum cDNA clone:dda9i08, 3' e... 650 0.0 1
(AC155311) Mus musculus BAC clone RP23-407F7 from chromosome... 46 0.84 1
(AC140314) Mus musculus BAC clone RP23-395L3 from chromosome... 46 0.84 1
(AC132894) Mus musculus chromosome 12 clone RP24-275D6 map 1... 46 0.84 1
(EJ755003) 1092963069037 Global-Ocean-Sampling_GS-30-02-01-1... 46 0.84 1
(EJ738388) 1092961215791 Global-Ocean-Sampling_GS-30-02-01-1... 46 0.84 1
(AC216510) Tupaia belangeri clone CH275-395N13, WORKING DRAF... 44 3.3 1
(AC206084) Tupaia belangeri clone CH275-334P10, WORKING DRAF... 44 3.3 1
(ET923179) CHO_OF463xf19f2.ab1 CHO_OF Nicotiana tabacum geno... 44 3.3 1
(CE523723) tigr-gss-dog-17000365690515 Dog Library Canis lup... 44 3.3 1
(CE389551) tigr-gss-dog-17000334444379 Dog Library Canis lup... 44 3.3 1
(ER977931) MUGQ_CH252P299H04T7_CP475_010 CHORI-252 Vervet Mo... 38 3.4 2
(ER976883) MUGQ_CH252P298C05T7_CP472_029 CHORI-252 Vervet Mo... 38 3.9 2
(U56961) Caenorhabditis elegans cosmid T19D7, complete seque... 42 8.1 2
(AQ409438) HS_5097_A1_B05_T7A RPCI-11 Human Male BAC Library... 32 8.6 2

>(BJ342057) Dictyostelium discoideum cDNA clone:dda9i08, 3' end,
single read.
Length = 353

Score = 650 bits (328), Expect = 0.0
Identities = 352/352 (100%)
Strand = Plus / Minus


Query: 11 ataggtgaatatcatnccnctnaagattttcaagtttcattgggcgttgaaanaattaaa 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ataggtgaatatcatnccnctnaagattttcaagtttcattgggcgttgaaanaattaaa 294


Query: 71 tgtcctgaaactttatttcanccnnaagcaatcattggtgtggatcaaatgggtttggtt 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tgtcctgaaactttatttcanccnnaagcaatcattggtgtggatcaaatgggtttggtt 234


Query: 131 aaggctattatctcttcaattctctcccaattgccagtggatacacgtaaattggtaaca 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 aaggctattatctcttcaattctctcccaattgccagtggatacacgtaaattggtaaca 174


Query: 191 gagaatatcttcctcactggtggtaatgtaaatactaaacnctttaaagatagaattcat 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 gagaatatcttcctcactggtggtaatgtaaatactaaacnctttaaagatagaattcat 114


Query: 251 tatgaaattcaacaaattcgtgaaccatattcacctttaaccatcttaaaatcaaaagac 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 tatgaaattcaacaaattcgtgaaccatattcacctttaaccatcttaaaatcaaaagac 54


Query: 311 tctcaattggatgcttggttaggtgctagaaaatggtgtttagataatcaag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 tctcaattggatgcttggttaggtgctagaaaatggtgtttagataatcaag 2

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 338,430,162
Number of extensions: 19088998
Number of successful extensions: 1362995
Number of sequences better than 10.0: 15
Length of query: 362
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 339
Effective length of database: 93,106,754,628
Effective search space: 31563189818892
Effective search space used: 31563189818892
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 6.23
Homology vs Protein
Query= Contig-U07413-1 (Contig-U07413-1Q) /CSM_Contig/Contig-U07413-1Q.Seq.d
(362 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q54E71) RecName: Full=Actin-related protein 5; AltName: Full=Ac... 220 1e-56
BC161381_1(BC161381|pid:none) Xenopus tropicalis ARP5 actin-rela... 75 5e-13
(Q80US4) RecName: Full=Actin-related protein 5; 74 2e-12
BC038402_1(BC038402|pid:none) Homo sapiens ARP5 actin-related pr... 73 3e-12
(Q9H9F9) RecName: Full=Actin-related protein 5; Short=h... 73 4e-12
AK022847_1(AK022847|pid:none) Homo sapiens cDNA FLJ12785 fis, cl... 73 4e-12
BC001324_1(BC001324|pid:none) Homo sapiens ARP5 actin-related pr... 73 4e-12
BC071150_1(BC071150|pid:none) Xenopus laevis hypothetical protei... 70 2e-11
AP002047_19(AP002047|pid:none) Arabidopsis thaliana genomic DNA,... 70 3e-11
AC069474_31(AC069474|pid:none) Arabidopsis thaliana chromosome 3... 70 3e-11
AM468363_2(AM468363|pid:none) Vitis vinifera contig VV78X009650.... 70 3e-11
AK318935_1(AK318935|pid:none) Arabidopsis thaliana AT3G12380 mRN... 70 3e-11
(Q9Y7X8) RecName: Full=Uncharacterized actin family protein C365... 68 9e-11
CR382128_402(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 68 1e-10
(Q9VEC3) RecName: Full=Actin-related protein 5; &AE014297_2542(... 67 1e-10
AP007161_147(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 67 3e-10
(Q17GZ9) RecName: Full=Actin-related protein 5; 66 3e-10
(A2WKK5) RecName: Full=Actin-related protein 5; &(A2ZP58) RecNa... 64 1e-09
FN392320_1264(FN392320|pid:none) Pichia pastoris GS115 chromosom... 62 6e-09
BT068577_1(BT068577|pid:none) Zea mays full-length cDNA clone ZM... 62 6e-09
AJ132371_1(AJ132371|pid:none) Allogromia sp. mRNA for actin 2. 61 1e-08
AY763939_1(AY763939|pid:none) Allogromia sp. A clone Al607_22 ac... 60 3e-08
CU928173_61(CU928173|pid:none) Zygosaccharomyces rouxii strain C... 60 3e-08
AY763942_1(AY763942|pid:none) Allogromia sp. A clone AloA159_6 a... 60 3e-08
CU928171_390(CU928171|pid:none) Kluyveromyces thermotolerans str... 59 5e-08
(P38673) RecName: Full=Actin-like protein; AltName: Full=Centrac... 57 2e-07
(P12717) RecName: Full=Actin, muscle; &JS0190(JS0190) &M26500_1... 57 2e-07
(P41113) RecName: Full=Actin-3; &JN0832(JN0832) &X69060_1(X6906... 57 2e-07
AY507124_1(AY507124|pid:none) Collozoum inerme isolate 2 actin (... 57 3e-07
CU640366_1324(CU640366|pid:none) Podospora anserina genomic DNA ... 57 3e-07
(P93738) RecName: Full=Putative actin-9; &G84849(G84849) &U9043... 56 3e-07
FJ973395_1(FJ973395|pid:none) Bigelowiella sp. RCC337 strain RCC... 56 4e-07
FM992695_382(FM992695|pid:none) Candida dubliniensis CD36 chromo... 56 4e-07
AY763984_1(AY763984|pid:none) Edaphoallogromia australica clone ... 55 6e-07
(P17126) RecName: Full=Actin, non-muscle 6.2; &JQ0154(JQ0154) &... 55 6e-07
AB036756_1(AB036756|pid:none) Pagrus major mRNA for B-actin, com... 55 8e-07
AB360593_1(AB360593|pid:none) Solea senegalensis ACTB mRNA for b... 55 8e-07
DQ665934_1(DQ665934|pid:none) Nyctotherus ovalis clone 6 actin g... 55 1e-06
CR855977_1(CR855977|pid:none) Paramecium tetraurelia macronuclea... 55 1e-06
AF002689_1(AF002689|pid:none) Podocarpus macrophyllus actin 2 (P... 55 1e-06
FJ355922_1(FJ355922|pid:none) Camellia sinensis actin (ACT2) gen... 55 1e-06
AY763954_1(AY763954|pid:none) Amphisorus hemprichii clone AmA114... 54 1e-06
EU668024_1(EU668024|pid:none) Apostichopus japonicus beta-actin ... 54 1e-06
(Q8TDG2) RecName: Full=Actin-related protein T1; Short=... 54 1e-06
CR382138_911(CR382138|pid:none) Debaryomyces hansenii strain CBS... 54 1e-06
DQ385449_1(DQ385449|pid:none) Culex pipiens pipiens beta-actin m... 54 2e-06
CR382126_148(CR382126|pid:none) Kluyveromyces lactis strain NRRL... 54 2e-06
ATURS(A03001;A60829) actin CyI - sea urchin (Strongylocentrotus ... 54 2e-06
BT049962_1(BT049962|pid:none) Salmo salar clone ssal-evd-503-108... 54 2e-06
(P93586) RecName: Full=Actin-46; Flags: Fragment; &U60487_1(U60... 54 2e-06
AY764002_1(AY764002|pid:none) Nonionella labradorica clone NoA53... 54 2e-06
AY763964_1(AY763964|pid:none) Bulimina marginata clone BuA538_21... 54 2e-06
AY763965_1(AY763965|pid:none) Elphidium cf. williamsoni clone El... 54 2e-06
AY763988_1(AY763988|pid:none) Miliolidae sp. isolate 3955 clone ... 54 2e-06
(P53466) RecName: Full=Actin, cytoskeletal 2; AltName: Full=LPC2... 54 2e-06
(Q4R821) RecName: Full=Actin-related protein T1; &AB168640_1(AB... 54 2e-06
(Q96481) RecName: Full=Actin-105; Flags: Fragment; &U60478_1(U6... 54 2e-06
AY763991_1(AY763991|pid:none) Marginopora kudakajimensis clone M... 54 2e-06
AY764003_1(AY764003|pid:none) Nonionella labradorica clone NoA53... 54 2e-06
AY763989_1(AY763989|pid:none) Miliolidae sp. isolate 3955 clone ... 54 2e-06
AY763982_1(AY763982|pid:none) Edaphoallogromia australica clone ... 54 2e-06
AY764012_1(AY764012|pid:none) Sorites sp. isolate X-1653 clone S... 54 2e-06
FJ455439_1(FJ455439|pid:none) Holothuria glaberrima actin isofor... 54 2e-06
AY763983_1(AY763983|pid:none) Edaphoallogromia australica clone ... 53 3e-06
AY764019_1(AY764019|pid:none) Stainforthia fusiformis clone StA9... 53 3e-06
AY335441_1(AY335441|pid:none) Chlamys farreri actin mRNA, comple... 53 3e-06
BC076896_1(BC076896|pid:none) Xenopus tropicalis actin,beta, mRN... 53 3e-06
AY764001_1(AY764001|pid:none) Nonionella labradorica clone NoA53... 53 3e-06
AY904067_1(AY904067|pid:none) Musa acuminata actin 2 mRNA, compl... 53 3e-06
AY763968_1(AY763968|pid:none) Elphidium cf. williamsoni clone El... 53 3e-06
AJ132375_1(AJ132375|pid:none) Reticulomyxa filosa mRNA for actin... 53 3e-06
AY766188_1(AY766188|pid:none) Ammonia sp. isolate 2306 clone AM1... 53 3e-06
AY763947_1(AY763947|pid:none) Ammonia sp. isolate 2306 clone AM1... 53 3e-06
DQ111776_1(DQ111776|pid:none) Porphyra purpurea actin (act1) gen... 53 3e-06
AB086826_1(AB086826|pid:none) Galaxea fascicularis LGfact mRNA f... 53 3e-06
AY763966_1(AY763966|pid:none) Elphidium cf. williamsoni clone El... 53 3e-06
AY906938_1(AY906938|pid:none) Carica papaya actin mRNA, partial ... 53 3e-06
AY763979_1(AY763979|pid:none) Hyalinea balthica clone HyA892_17 ... 53 3e-06
AY764020_1(AY764020|pid:none) Stainforthia fusiformis clone StA9... 53 3e-06
AY283744_1(AY283744|pid:none) Chlamydaster sterni isolate Chlam3... 53 4e-06
(Q8RYC2) RecName: Full=Putative actin-5; &H84849(H84849) &U9043... 53 4e-06
AC002561_1(AC002561|pid:none) Arabidopsis thaliana chromosome 2 ... 53 4e-06
AC134930_12(AC134930|pid:none) Oryza sativa (japonica cultivar-g... 53 4e-06
EU019550_1(EU019550|pid:none) Zygophyllum xanthoxylum actin mRNA... 53 4e-06
(P53465) RecName: Full=Actin, cytoskeletal 1; AltName: Full=LPC1... 53 4e-06
AY283746_1(AY283746|pid:none) Raphidiophrys ambigua isolate RAA1... 53 4e-06
AF284836_1(AF284836|pid:none) Cryptomonas ovata actin mRNA, part... 53 4e-06
(P93585) RecName: Full=Actin-65; Flags: Fragment; &U60486_1(U60... 53 4e-06
AF002686_1(AF002686|pid:none) Cycas revoluta actin 3 (Cyc3) gene... 53 4e-06
AY026072_1(AY026072|pid:none) Monosiga brevicollis actin mRNA, c... 53 4e-06
AF076518_1(AF076518|pid:none) Molgula oculata clone MocuCA2 cyto... 53 4e-06
EU334881_1(EU334881|pid:none) Andalucia incarcerata isolate MB1 ... 53 4e-06
AY763948_1(AY763948|pid:none) Ammonia sp. isolate 2306 clone AM1... 53 4e-06
AF035422_1(AF035422|pid:none) Ovis aries beta-actin mRNA, partia... 53 4e-06
(Q554S6) RecName: Full=Actin-17; AltName: Full=Actin-2-sub 2; &... 53 4e-06
(O65315) RecName: Full=Actin; &AF061019_1(AF061019|pid:none) 53 4e-06
AY582839_1(AY582839|pid:none) Discodermia sp. ETS-2004 actin gen... 53 4e-06
(Q964E1) RecName: Full=Actin, cytoplasmic; &AF329439_1(AF329439... 52 5e-06
U60508_1(U60508|pid:none) Zea mays actin (Maz89) gene, partial c... 52 5e-06
DQ314617_1(DQ314617|pid:none) Anthopleura elegantissima beta-act... 52 5e-06
DQ665832_1(DQ665832|pid:none) Boehmeria nivea actin 1 mRNA, part... 52 5e-06
AY742219_1(AY742219|pid:none) Saccharum officinarum actin mRNA, ... 52 5e-06
AB239789_1(AB239789|pid:none) Rosa hybrid cultivar ACT mRNA for ... 52 5e-06
AB190176_1(AB190176|pid:none) Pyrus communis PcACT mRNA for acti... 52 5e-06
FJ355923_1(FJ355923|pid:none) Camellia sinensis actin (ACT3) gen... 52 5e-06
U63122_1(U63122|pid:none) Trichomonas vaginalis actin gene, comp... 52 5e-06
BT071276_1(BT071276|pid:none) Picea sitchensis clone WS02817_N24... 52 5e-06
FJ560483_1(FJ560483|pid:none) Gossypium hirsutum actin 1 mRNA, c... 52 5e-06
AM465189_1(AM465189|pid:none) Vitis vinifera contig VV78X204398.... 52 5e-06
EF144345_1(EF144345|pid:none) Populus trichocarpa clone PX0015_O... 52 5e-06
(O17320) RecName: Full=Actin; &AF026063_1(AF026063|pid:none) &F... 52 5e-06
DQ115883_1(DQ115883|pid:none) Cucumis sativus cultivar MT700 act... 52 5e-06
AY382282_1(AY382282|pid:none) Physcomitrella patens actin 1 (Act... 52 5e-06
AF237734_2(AF237734|pid:none) Trichomonas vaginalis putative ade... 52 5e-06
EU076584_1(EU076584|pid:none) Trichomonas vaginalis isolate K108... 52 5e-06
AY763981_1(AY763981|pid:none) Hyalinea balthica clone HyA892_25 ... 52 5e-06
EF063572_1(EF063572|pid:none) Actinidia deliciosa ACT1 (ACT1) mR... 52 5e-06
AY763999_1(AY763999|pid:none) Marginopora vertebralis clone MvA1... 52 5e-06
EU966503_1(EU966503|pid:none) Zea mays clone 294922 unknown mRNA. 52 5e-06
AJ297725_1(AJ297725|pid:none) Ciona intestinalis mRNA for putati... 52 5e-06
AY763996_1(AY763996|pid:none) Marginopora vertebralis clone MvA1... 52 5e-06
EF144249_1(EF144249|pid:none) Populus trichocarpa clone PX0011_N... 52 5e-06
AF076516_1(AF076516|pid:none) Molgula oculata clone MocuCA1 cyto... 52 5e-06
EF144294_1(EF144294|pid:none) Populus trichocarpa clone PX0015_H... 52 5e-06
AY847627_1(AY847627|pid:none) Vitis vinifera cultivar Riesling a... 52 5e-06
AY089535_1(AY089535|pid:none) Drosophila melanogaster LD04994 fu... 52 5e-06
(Q55CU2) RecName: Full=Putative actin-26; 52 5e-06
(O16808) RecName: Full=Actin; &AF017427_1(AF017427|pid:none) 52 5e-06
FJ355921_1(FJ355921|pid:none) Camellia sinensis actin (ACT1) gen... 52 5e-06
EU131153_1(EU131153|pid:none) Nelumbo nucifera actin mRNA, parti... 52 5e-06
FJ669294_1(FJ669294|pid:none) Crassostrea gigas isolate IV_24 ac... 52 5e-06
EU340557_1(EU340557|pid:none) Dimocarpus longan actin mRNA, part... 52 5e-06
EU047833_1(EU047833|pid:none) Chilodonella uncinata clone P3 act... 52 5e-06
AF172094_1(AF172094|pid:none) Picea rubens actin mRNA, complete ... 52 5e-06
EU960271_1(EU960271|pid:none) Zea mays clone 223048 actin-1 mRNA... 52 5e-06
AY763997_1(AY763997|pid:none) Marginopora vertebralis clone MvA1... 52 5e-06
(P12716) RecName: Full=Actin, cytoplasmic; &JS0189(JS0189) &M26... 52 5e-06
FJ515905_1(FJ515905|pid:none) Artemisia sphaerocephala actin mRN... 52 5e-06
AY273142_1(AY273142|pid:none) Zea mays actin gene, partial cds. 52 5e-06
AJ132381_1(AJ132381|pid:none) Penaeus vannamei mRNA for Actin. 52 5e-06
DQ369967_1(DQ369967|pid:none) Ciona intestinalis actin mRNA, com... 52 5e-06
EU076580_1(EU076580|pid:none) Trichomonas vaginalis strain ATCC ... 52 5e-06
AF282624_1(AF282624|pid:none) Helianthus annuus actin mRNA, comp... 52 5e-06
AY857865_1(AY857865|pid:none) Linum usitatissimum actin (Act1) m... 52 5e-06
EF678025_1(EF678025|pid:none) Picea sitchensis clone WS02818_M15... 52 5e-06
AY550991_1(AY550991|pid:none) Elaeis guineensis actine (ACT1) mR... 52 5e-06
AJ287174_1(AJ287174|pid:none) Mucor hiemalis f. hiemalis partial... 52 6e-06
EF144552_1(EF144552|pid:none) Populus trichocarpa clone WS01110_... 52 6e-06
AM429188_1(AM429188|pid:none) Vitis vinifera contig VV78X040868.... 52 6e-06
AB032361_1(AB032361|pid:none) Mimosa pudica mRNA for actin isofo... 52 6e-06
DQ980422_1(DQ980422|pid:none) Goniomonas truncata clone gtactin2... 52 6e-06
BC089487_1(BC089487|pid:none) Mus musculus RIKEN cDNA 1700029I08... 52 6e-06
AB239794_1(AB239794|pid:none) Rosa hybrid cultivar ACT mRNA for ... 52 6e-06
U60500_1(U60500|pid:none) Glycine max actin (Soy57) gene, partia... 52 6e-06
(P53461) RecName: Full=Actin, nonmuscle; &D45164_1(D45164|pid:n... 52 6e-06
(Q92193) RecName: Full=Actin; Flags: Fragment; &X75894_1(X75894... 52 6e-06
AY764005_1(AY764005|pid:none) Tretomphalus sp. B123 clone nTRE1 ... 52 6e-06
(Q25381) RecName: Full=Actin, muscle; AltName: Full=LPM; Flags: ... 52 6e-06
AC155342_9(AC155342|pid:none) Brassica rapa subsp. pekinensis cl... 52 6e-06
(P93376) RecName: Full=Actin-103; Flags: Fragment; &U60495_1(U6... 52 6e-06
U52519_1(U52519|pid:none) Dugesia tigrina actin mRNA, complete c... 52 6e-06
AF237626_1(AF237626|pid:none) Vallisneria natans actin 1 mRNA, p... 52 6e-06
AB330990_1(AB330990|pid:none) Torenia fournieri ACT4 mRNA for ac... 52 6e-06
(P10981) RecName: Full=Actin-87E; &AE014297_1743(AE014297|pid:n... 52 6e-06
AF285176_1(AF285176|pid:none) Musa ABB Group actin (ACT1) gene, ... 52 6e-06
BT052195_1(BT052195|pid:none) Medicago truncatula clone MTYF9_FA... 52 6e-06
(P53464) RecName: Full=Actin, cytoskeletal; AltName: Full=M; &U... 52 6e-06
EU293218_1(EU293218|pid:none) Euagrus chisoseus clone E181 actin... 52 6e-06
(P53499) RecName: Full=Actin; &S57262(S57262;S57263) &U03676_1(... 52 6e-06
AY071868_1(AY071868|pid:none) Chlamydomonas moewusii actin gene,... 52 6e-06
EU293219_1(EU293219|pid:none) Euagrus chisoseus clone E1F5 actin... 52 6e-06
AY145451_1(AY145451|pid:none) Hordeum vulgare actin mRNA, comple... 52 6e-06
EU490422_1(EU490422|pid:none) Oryzias dancena beta-actin mRNA, p... 52 6e-06
FJ669289_1(FJ669289|pid:none) Crassostrea gigas isolate I_15 act... 52 6e-06
AY372368_1(AY372368|pid:none) Trifolium pratense actin mRNA, com... 52 6e-06
DQ980431_1(DQ980431|pid:none) Pterosperma cristatum clone pcacti... 52 6e-06
(Q00215) RecName: Full=Actin, cytoplasmic; &S33386(S33386;S21926) 52 6e-06
(P53492) RecName: Full=Actin-7; AltName: Full=Actin-2; &AB01689... 52 6e-06
EF672732_1(EF672732|pid:none) Musa acuminata actin (ACT1) gene, ... 52 6e-06
DQ452963_1(DQ452963|pid:none) Teleopsis thaii isolate 1 actin (a... 52 6e-06
T51178(T51178) actin ACT2 [imported] - Striga asiatica &U68462_... 52 6e-06
EF640325_1(EF640325|pid:none) Rhodomonas sp. CCMP768 actin (Act1... 52 6e-06
FJ973385_1(FJ973385|pid:none) Rhodomonas sp. CCMP768 strain CCMP... 52 6e-06
AY113405_1(AY113405|pid:none) Drosophila melanogaster RE12057 fu... 52 6e-06
(P53463) RecName: Full=Actin, cytoskeletal; AltName: Full=M; &U... 52 6e-06
EU293216_1(EU293216|pid:none) Euagrus chisoseus clone E147 actin... 52 6e-06
EF148196_1(EF148196|pid:none) Populus trichocarpa clone WS0128_K... 52 6e-06
BC100422_1(BC100422|pid:none) Mus musculus RIKEN cDNA 1700029I08... 52 6e-06
EU046593_1(EU046593|pid:none) Corchorus olitorius actin 7 mRNA, ... 52 6e-06
(P45886) RecName: Full=Actin-3, muscle-specific; &L12255_1(L122... 52 6e-06
DQ452965_1(DQ452965|pid:none) Teleopsis thaii isolate 3 actin (a... 52 6e-06
BT041024_1(BT041024|pid:none) Zea mays full-length cDNA clone ZM... 52 6e-06
(P93587) RecName: Full=Actin-42; Flags: Fragment; &U60488_1(U60... 52 6e-06
(P93584) RecName: Full=Actin-82; Flags: Fragment; &U60483_1(U60... 52 6e-06
FJ973383_1(FJ973383|pid:none) Cryptomonas paramecium strain CCAP... 52 6e-06
DQ980421_1(DQ980421|pid:none) Goniomonas truncata clone gtactin1... 52 6e-06
FJ869869_1(FJ869869|pid:none) Picea abies actin 2 mRNA, complete... 52 6e-06
AJ880409_1(AJ880409|pid:none) Rhodosorus marinus partial act gen... 52 8e-06
EU328529_1(EU328529|pid:none) Lolium temulentum actin (ACT11) mR... 52 8e-06
AY156508_1(AY156508|pid:none) Myxobolus cerebralis beta-actin mR... 52 8e-06
DQ059028_1(DQ059028|pid:none) Diaphanoeca grandis actin gene, pa... 52 8e-06
AF288226_1(AF288226|pid:none) Setaria italica actin mRNA, comple... 52 8e-06
AY297438_1(AY297438|pid:none) Aiptasia pulchella beta actin mRNA... 52 8e-06
AJ000376_1(AJ000376|pid:none) Helobdella triserialis mRNA for ac... 52 8e-06
AY305724_1(AY305724|pid:none) Gossypium hirsutum actin (ACT2) mR... 52 8e-06
FJ372564_1(FJ372564|pid:none) Sedum alfredii isolate Nheact1 act... 52 8e-06
X05739_1(X05739|pid:none) Sea urchin muscle actin gene exon 2 an... 52 8e-06
(P93371) RecName: Full=Actin-93; Flags: Fragment; &U60489_1(U60... 52 8e-06
AY763958_1(AY763958|pid:none) Bathysiphon cf. flexilis clone BtA... 52 8e-06
(P30171) RecName: Full=Actin-97; &S20098(S20098) &X55751_1(X557... 52 8e-06
AF246716_1(AF246716|pid:none) Phalaenopsis sp. 'True Lady' actin... 52 8e-06
AY305725_1(AY305725|pid:none) Gossypium hirsutum actin (ACT3) mR... 52 8e-06
(P93375) RecName: Full=Actin-104; Flags: Fragment; &U60494_1(U6... 52 8e-06
AF090968_1(AF090968|pid:none) Selaginella apoda actin (Ac1) gene... 52 8e-06
AY763956_1(AY763956|pid:none) Bathysiphon cf. flexilis clone BtA... 52 8e-06
FJ485727_1(FJ485727|pid:none) Caragana korshinskii actin (ACT1) ... 52 8e-06
S43509(S43509) actin - California sea hare &U01352_1(U01352|pid... 52 8e-06
T51177(T51177) actin [imported] - Striga asiatica &U68461_1(U68... 52 8e-06
EU952376_1(EU952376|pid:none) Zea mays clone 1278863 actin-2 mRN... 52 8e-06
(Q964E2) RecName: Full=Actin, cytoplasmic; &AF329438_1(AF329438... 52 8e-06
AB097503_1(AB097503|pid:none) Ulva pertusa actin mRNA for beta-a... 52 8e-06
(P30172) RecName: Full=Actin-100; Flags: Fragment; &X55746_1(X5... 52 8e-06
DQ665650_1(DQ665650|pid:none) Torenia fournieri actin 2 (ACT2) g... 52 8e-06
EF446138_1(EF446138|pid:none) Daviesia angulata isolate 226 acti... 52 8e-06
AP008218_324(AP008218|pid:none) Oryza sativa (japonica cultivar-... 52 8e-06
AF090969_1(AF090969|pid:none) Selaginella apoda actin (Ac2) gene... 52 8e-06
(P81228) RecName: Full=Actin-66; Flags: Fragment; &U60485_1(U60... 52 8e-06
AY763957_1(AY763957|pid:none) Bathysiphon cf. flexilis clone BtA... 52 8e-06
AY763938_1(AY763938|pid:none) Rotaliina sp. isolate 3953 clone 5... 52 8e-06
EF455726_1(EF455726|pid:none) Cryptomonas paramecium actin gene,... 52 8e-06
(P30164) RecName: Full=Actin-1; &S25488(S25488) &X67666_1(X6766... 52 8e-06
(P12431) RecName: Full=Actin, muscle; 52 8e-06
AY305013_1(AY305013|pid:none) Gromia oviformis actin mRNA, parti... 52 8e-06
AF200957_1(AF200957|pid:none) Rhynchocypris oxycephalus beta-act... 52 8e-06
(P30173) RecName: Full=Actin-101; &S20093(S20093;S20092) &X5575... 52 8e-06
(Q964E3) RecName: Full=Actin, cytoplasmic; &AF329437_1(AF329437... 52 8e-06
AM500645_2(AM500645|pid:none) Microcystis aeruginosa PCC 7806 ac... 52 8e-06
DQ665649_1(DQ665649|pid:none) Torenia fournieri actin 1 (ACT1) g... 52 8e-06
AY870652_1(AY870652|pid:none) Isatis tinctoria actin mRNA, compl... 52 8e-06
AB292588_1(AB292588|pid:none) Lobosphaeropsis lobophora gene for... 52 8e-06
DQ111778_1(DQ111778|pid:none) Porphyra purpurea actin (act3) gen... 51 1e-05
DQ980419_1(DQ980419|pid:none) Glaucocystis nostochinearum clone ... 51 1e-05
U60509_1(U60509|pid:none) Zea mays actin (Maz87) gene, partial c... 51 1e-05
(A3C6D7) RecName: Full=Actin-2; &(P0C539) RecName: Fu &AC087192... 51 1e-05
(P30167) RecName: Full=Actin-58; &S20094(S20094) &X55749_1(X557... 51 1e-05
DQ980420_1(DQ980420|pid:none) Glaucocystis nostochinearum clone ... 51 1e-05
AM475102_1(AM475102|pid:none) Vitis vinifera contig VV78X148227.... 51 1e-05
U90325_1(U90325|pid:none) Cyanophora paradoxa actin gene, partia... 51 1e-05
(Q96293) RecName: Full=Actin-8; &AC016041_1(AC016041|pid:none) ... 51 1e-05
BT061870_1(BT061870|pid:none) Zea mays full-length cDNA clone ZM... 51 1e-05
AB046452_1(AB046452|pid:none) Nannochloris maculata gene for act... 51 1e-05
EU429457_1(EU429457|pid:none) Suaeda glauca actin mRNA, partial ... 51 1e-05
(P53459) RecName: Full=Actin-6; Flags: Fragment; &U27837_1(U278... 51 1e-05
(Q96292) RecName: Full=Actin-2; &AB026654_16(AB026654|pid:none)... 51 1e-05
AY305737_1(AY305737|pid:none) Gossypium hirsutum actin (ACT9) mR... 51 1e-05
AF044573_1(AF044573|pid:none) Brassica oleracea actin (Act1) mRN... 51 1e-05
FJ217209_1(FJ217209|pid:none) Homarus americanus skeletal muscle... 51 1e-05
AY087348_1(AY087348|pid:none) Arabidopsis thaliana clone 34479 m... 51 1e-05
AJ880410_1(AJ880410|pid:none) Stylonema alsidii partial act gene... 51 1e-05
(P30169) RecName: Full=Actin-75; &S20096(S20096) &X55753_1(X557... 51 1e-05
(P53460) RecName: Full=Actin, muscle 1A; &D29014_1(D29014|pid:n... 51 1e-05
AM920437_350(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 51 1e-05
BT051890_1(BT051890|pid:none) Medicago truncatula clone MTYF5_F6... 51 1e-05
EU664318_1(EU664318|pid:none) Medicago sativa beta actin mRNA, p... 51 1e-05
EF514504_1(EF514504|pid:none) Corallomyxa sp. tenera clone 2 act... 51 1e-05
FJ669288_1(FJ669288|pid:none) Crassostrea gigas isolate I_8 acti... 51 1e-05
FJ560484_1(FJ560484|pid:none) Gossypium hirsutum actin 2 mRNA, c... 51 1e-05
AC120533_12(AC120533|pid:none) Oryza sativa (japonica cultivar-g... 51 1e-05
AF234528_1(AF234528|pid:none) Avena nuda actin 1 gene, complete ... 51 1e-05
U60502_1(U60502|pid:none) Glycine max actin (Soy119) gene, parti... 51 1e-05
AY885683_1(AY885683|pid:none) Siniperca chuatsi beta-actin mRNA,... 51 1e-05
AY571669_1(AY571669|pid:none) Gromia oviformis actin gene, parti... 51 1e-05
AY134752_1(AY134752|pid:none) Phalaenopsis hybrid cultivar actin... 51 1e-05
(P07829) RecName: Full=Actin-3; AltName: Full=Actin-3-sub 1; 51 1e-05
CP001327_428(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 51 1e-05
(P68140) RecName: Full=Actin, alpha skeletal muscle A; AltName: ... 51 1e-05
(P53480) RecName: Full=Actin, alpha cardiac; &AB016259_1(AB0162... 51 1e-05
FM992692_311(FM992692|pid:none) Candida dubliniensis CD36 chromo... 51 1e-05
(Q964D9) RecName: Full=Actin, cytoplasmic; &AF329441_1(AF329441... 51 1e-05
BC045406_1(BC045406|pid:none) Danio rerio actin, alpha 1, skelet... 51 1e-05
A54728(A54728) actin alpha, cardiac - mouse (fragment) &M15501_... 51 1e-05
(P07828) RecName: Full=Actin-18; AltName: Full=Actin-3-sub 2; 51 1e-05
AY395871_1(AY395871|pid:none) Cyprinus carpio skeletal muscle ac... 51 1e-05
(P53497) RecName: Full=Actin-12; &AL133314_4(AL133314|pid:none)... 51 1e-05
(P04751) RecName: Full=Actin, alpha cardiac muscle 1; AltName: F... 51 1e-05
BC075896_1(BC075896|pid:none) Danio rerio actin, alpha 2, smooth... 51 1e-05
EU047830_1(EU047830|pid:none) Chilodonella uncinata clone P4 act... 51 1e-05
AY763974_1(AY763974|pid:none) Globobulimina turgida clone GoA130... 51 1e-05
BC046739_1(BC046739|pid:none) Xenopus laevis similar to actin al... 51 1e-05
AF317896_1(AF317896|pid:none) Helicosporidium sp. AT-2000 actin ... 51 1e-05
AY763399_1(AY763399|pid:none) Rosalina sp. RoA163_38s clone RoA1... 51 1e-05
AY395870_1(AY395870|pid:none) Cyprinus carpio skeletal muscle al... 51 1e-05
(P10995) RecName: Full=Actin, alpha sarcomeric/cardiac; AltName:... 51 1e-05
(Q03342) RecName: Full=Actin-3; Flags: Fragment; &L07775_1(L077... 51 1e-05
U63123_1(U63123|pid:none) Trichomonas vaginalis clone Type5 acti... 51 1e-05
AK056592_1(AK056592|pid:none) Homo sapiens cDNA FLJ32030 fis, cl... 51 1e-05
X05393_1(X05393|pid:none) Xenopus tropicalis alpha2 gene for sar... 51 1e-05
AF012348_1(AF012348|pid:none) Gallus gallus smooth muscle gamma ... 51 1e-05
EU047822_1(EU047822|pid:none) Chilodonella uncinata clone F1RB a... 51 1e-05
AB168686_1(AB168686|pid:none) Macaca fascicularis testis cDNA cl... 51 1e-05
AY222742_1(AY222742|pid:none) Danio rerio actin mRNA, complete c... 51 1e-05
AB080312_1(AB080312|pid:none) Chlorella vulgaris actin-1 gene fo... 51 1e-05
AY088111_1(AY088111|pid:none) Arabidopsis thaliana clone 41421 m... 51 1e-05
BC071386_1(BC071386|pid:none) Danio rerio zgc:86709, mRNA (cDNA ... 51 1e-05
(Q96484) RecName: Full=Actin-52; Flags: Fragment; &U60482_1(U60... 51 1e-05
EF455729_1(EF455729|pid:none) Diacronema sp. CCMP610 actin gene,... 51 1e-05
U60514_1(U60514|pid:none) Zea mays actin (Maz56) gene, partial c... 51 1e-05
BT060552_1(BT060552|pid:none) Zea mays full-length cDNA clone ZM... 51 1e-05
AK146899_1(AK146899|pid:none) Mus musculus 17 days embryo heart ... 51 1e-05
(P93372) RecName: Full=Actin-66; Flags: Fragment; &U60491_1(U60... 51 1e-05
AF284835_1(AF284835|pid:none) Guillardia theta actin mRNA, parti... 51 1e-05
AB169918_1(AB169918|pid:none) Macaca fascicularis brain cDNA, cl... 51 1e-05
(P30168) RecName: Full=Actin-71; &S20095(S20095) &X55750_1(X557... 51 1e-05
AY452189_1(AY452189|pid:none) Sorosphaera veronicae actin 1 gene... 51 1e-05
EU784812_1(EU784812|pid:none) Oreochromis aureus beta-actin gene... 51 1e-05
AY452190_1(AY452190|pid:none) Sorosphaera veronicae actin 2 gene... 51 1e-05
AY309091_1(AY309091|pid:none) Cyprinus carpio skeletal muscle ac... 51 1e-05
EF206793_1(EF206793|pid:none) Oreochromis niloticus clone On1a9 ... 51 1e-05
(Q98972) RecName: Full=Actin, alpha skeletal muscle; AltName: Fu... 51 1e-05
BT039716_1(BT039716|pid:none) Zea mays full-length cDNA clone ZM... 51 1e-05
AK014307_1(AK014307|pid:none) Mus musculus 14, 17 days embryo he... 51 1e-05
B25819(B25819) actin, fetal skeletal/adult cardiac muscle - mous... 51 1e-05
AB158612_1(AB158612|pid:none) Nicotiana tabacum mRNA for actin, ... 51 1e-05
(P45891) RecName: Full=Actin-like protein 53D; &AE013599_2476(A... 51 1e-05
AF234973_1(AF234973|pid:none) Japetella diaphana clone 17 actin ... 51 1e-05
(P68032) RecName: Full=Actin, alpha cardiac muscle 1; AltName: F... 51 1e-05
AB360966_1(AB360966|pid:none) Pagrus major ACTA1 gene for skelet... 51 1e-05
(P53479) RecName: Full=Actin, alpha skeletal muscle; AltName: Fu... 51 1e-05
AK290616_1(AK290616|pid:none) Homo sapiens cDNA FLJ78096 complet... 51 1e-05
AY891034_1(AY891034|pid:none) Synthetic construct Homo sapiens c... 51 1e-05
EU076579_1(EU076579|pid:none) Trichomonas vaginalis strain ATCC ... 51 1e-05
EF206797_1(EF206797|pid:none) Oreochromis niloticus clone On5a18... 51 1e-05
CR954216_37(CR954216|pid:none) Ostreococcus tauri strain OTTH059... 51 1e-05
FJ716131_1(FJ716131|pid:none) Dicentrarchus labrax alpha actin m... 51 1e-05
EF206800_1(EF206800|pid:none) Oreochromis niloticus clone On5a5 ... 51 1e-05
S47986(S47986) actin-related protein ARP53D - fruit fly (Drosoph... 51 1e-05
AB076674_1(AB076674|pid:none) Lethenteron japonicum LjMA1 mRNA f... 51 1e-05
AJ880404_1(AJ880404|pid:none) Flintiella sanguinaria partial act... 51 1e-05
ATBOSM(A02997;S13480)actin, aortic smooth muscle - bovine 51 1e-05
AB242568_1(AB242568|pid:none) Varroa destructor mRNA for cytopla... 51 1e-05
U63125_1(U63125|pid:none) Trichomonas vaginalis clone Type4 acti... 51 1e-05
AB086243_1(AB086243|pid:none) Coryphaenoides yaquinae mRNA for s... 51 1e-05
BC061264_1(BC061264|pid:none) Xenopus tropicalis hypothetical pr... 51 1e-05
AF180887_1(AF180887|pid:none) Danio rerio skeletal alpha1 actin ... 51 1e-05
AB052654_1(AB052654|pid:none) Lampetra japonica LjMA2 mRNA for m... 51 1e-05
ATHUSM(A35020;S03286;I54050;A02996) actin alpha 2, aortic smooth... 51 1e-05
AK300664_1(AK300664|pid:none) Homo sapiens cDNA FLJ52761 complet... 51 1e-05
(O15998) RecName: Full=Actin, muscle; &AB008817_1(AB008817|pid:... 51 1e-05
AY891000_1(AY891000|pid:none) Synthetic construct Homo sapiens c... 51 1e-05
AK124338_1(AK124338|pid:none) Homo sapiens cDNA FLJ42347 fis, cl... 51 1e-05
EF206794_1(EF206794|pid:none) Oreochromis niloticus clone On3a8 ... 51 1e-05
AY398305_1(AY398305|pid:none) Danio rerio clone RK113A4D08 actin... 51 1e-05
U76192_1(U76192|pid:none) Pisum sativum actin (PEAc11) mRNA, par... 51 1e-05
U60511_1(U60511|pid:none) Zea mays actin (Maz81) gene, partial c... 51 1e-05
AJ287182_1(AJ287182|pid:none) Parasitella parasitica partial act... 50 2e-05
AF100986_1(AF100986|pid:none) Penaeus monodon actin 1 (act1) mRN... 50 2e-05
(P18601) RecName: Full=Actin, clone 211; &S11451(S11451) &X5260... 50 2e-05
(Q96483) RecName: Full=Actin-51; Flags: Fragment; &U60481_1(U60... 50 2e-05
EU184877_1(EU184877|pid:none) Labeo rohita beta-actin mRNA, part... 50 2e-05
AY825362_1(AY825362|pid:none) Chorispora bungeana putative actin... 50 2e-05
DQ448222_1(DQ448222|pid:none) Artemia franciscana clone 0NM34.05... 50 2e-05
(P92179) RecName: Full=Actin, cytoplasmic; &AF329436_1(AF329436... 50 2e-05
(P69004) RecName: Full=Actin-15B; &(P69005) RecName: Fu &M35323... 50 2e-05
AY763936_1(AY763936|pid:none) Rotaliina sp. isolate 3953 clone 5... 50 2e-05
AF284838_1(AF284838|pid:none) Goniomonas truncata clone 3 actin ... 50 2e-05
BC140575_1(BC140575|pid:none) Bos taurus actin, alpha 2, smooth ... 50 2e-05
A48449(A48449)Actin-1A - nematode (Onchocerca volvulus) 50 2e-05
DQ656598_1(DQ656598|pid:none) Spinibarbus denticulatus beta-acti... 50 2e-05
(Q553U6) RecName: Full=Putative actin-22; &AC116305_3(AC116305|... 50 2e-05
AJ292554_1(AJ292554|pid:none) Daphnia magna mRNA for actin. 50 2e-05
AY724689_1(AY724689|pid:none) Capsaspora owczarzaki actin mRNA, ... 50 2e-05
U60498_1(U60498|pid:none) Glycine max actin (Soy69) gene, partia... 50 2e-05
EU825991_1(EU825991|pid:none) Mantichorula semenowi beta-actin m... 50 2e-05
(P49128) RecName: Full=Actin-1; 50 2e-05
AY651918_1(AY651918|pid:none) Macrobrachium rosenbergii beta-act... 50 2e-05
AY588061_1(AY588061|pid:none) Homalodisca coagulata putative mus... 50 2e-05
EU301432_1(EU301432|pid:none) Culex nigripalpus actin (Act-1) ge... 50 2e-05
AY763960_1(AY763960|pid:none) Bathysiphon cf. flexilis clone BtA... 50 2e-05
DQ641940_1(DQ641940|pid:none) Artemia franciscana clone 0NM34.05... 50 2e-05
FJ217207_1(FJ217207|pid:none) Homarus americanus skeletal muscle... 50 2e-05
AY581122_1(AY581122|pid:none) Sitobion avenae clone pT-actin2 ac... 50 2e-05
AY251802_1(AY251802|pid:none) Gymnochlora stellata ubiquitin/act... 50 2e-05
(P30162) RecName: Full=Actin-1; &M84916_1(M84916|pid:none) 50 2e-05
AY763993_1(AY763993|pid:none) Marginopora kudakajimensis clone M... 50 2e-05
AY305734_1(AY305734|pid:none) Gossypium hirsutum actin (ACT13) m... 50 2e-05
EU047829_1(EU047829|pid:none) Chilodonella uncinata clone P2 act... 50 2e-05
AF276076_1(AF276076|pid:none) Ambystoma mexicanum cardiac actin ... 50 2e-05
(P20904) RecName: Full=Actin; &M33963_1(M33963|pid:none) &S1412... 50 2e-05
DQ023309_1(DQ023309|pid:none) Culex pipiens pipiens actin mRNA, ... 50 2e-05
AJ880411_1(AJ880411|pid:none) Bonnemaisonia hamifera partial act... 50 2e-05
AF079359_1(AF079359|pid:none) Setaria digitata actin gene, compl... 50 2e-05
DQ675553_1(DQ675553|pid:none) Diaphorina citri clone WHDc1161 pu... 50 2e-05
(Q00214) RecName: Full=Actin, muscle; &S33387(S33387;S21927) 50 2e-05
AF386514_1(AF386514|pid:none) Pyrus communis actin mRNA, partial... 50 2e-05
AY817141_1(AY817141|pid:none) Apriona germari actin mRNA, comple... 50 2e-05
AF212251_1(AF212251|pid:none) Homo sapiens CDA12 mRNA, complete ... 50 2e-05
ATRB(A92182;A14185;S65873;S70610;S44393;A02994)actin, skeletal m... 50 2e-05
AF113908_1(AF113908|pid:none) Emericella nidulans actin-related ... 50 2e-05
(Q54H30) RecName: Full=Major actin; AltName: Full=Actin-1; AltNa... 50 2e-05
BC134665_1(BC134665|pid:none) Bos taurus actin, alpha 1, skeleta... 50 2e-05
AF393832_1(AF393832|pid:none) Morulius calbasu beta-actin mRNA, ... 50 2e-05
DQ665932_1(DQ665932|pid:none) Nyctotherus ovalis clone 4 actin g... 50 2e-05
AF270649_1(AF270649|pid:none) Misgurnus mizolepis beta-actin gen... 50 2e-05
ATDO(A93223;A92871;S67999;A03004)actin - slime mold (Dictyosteli... 50 2e-05
(P17304) RecName: Full=Actin, muscle; &S12730(S12730) &X52868_1... 50 2e-05
AL160004_2(AL160004|pid:none) Human DNA sequence from clone RP5-... 50 2e-05
ATMUM1(JA0066;S68111) actin - Arabidopsis thaliana &M20016_1(M2... 50 2e-05
(O65316) RecName: Full=Actin; &AF061020_1(AF061020|pid:none) 50 2e-05
AY764008_1(AY764008|pid:none) Reophax sp. isolate 3969 clone Reo... 50 2e-05
(P90689) RecName: Full=Actin; &Z85981_1(Z85981|pid:none) 50 2e-05
DQ007446_1(DQ007446|pid:none) Cirrhinus molitorella beta-actin m... 50 2e-05
AK023684_1(AK023684|pid:none) Homo sapiens cDNA FLJ13622 fis, cl... 50 2e-05
DQ365853_1(DQ365853|pid:none) Clarias fuscus beta-actin mRNA, pa... 50 2e-05
AK096902_1(AK096902|pid:none) Homo sapiens cDNA FLJ39583 fis, cl... 50 2e-05
(Q96482) RecName: Full=Actin-41; Flags: Fragment; &U60480_1(U60... 50 2e-05
(Q90X97) RecName: Full=Actin, alpha skeletal muscle; AltName: Fu... 50 2e-05
DQ399294_1(DQ399294|pid:none) Aristichthys nobilis beta-actin mR... 50 2e-05
AK222959_1(AK222959|pid:none) Homo sapiens mRNA for ARP6 actin-r... 50 2e-05
AY986487_1(AY986487|pid:none) Rana catesbeiana cardiac alpha act... 50 2e-05
BC072097_1(BC072097|pid:none) Xenopus laevis hypothetical protei... 50 2e-05
AF388172_1(AF388172|pid:none) Scyliorhinus retifer fast muscle a... 50 2e-05
U02285_1(U02285|pid:none) Bos taurus alpha skeletal actin precur... 50 2e-05
EU784813_1(EU784813|pid:none) Oreochromis aureus beta-actin mRNA... 50 2e-05
(P53458) RecName: Full=Actin-5; Flags: Fragment; &U27836_1(U278... 50 2e-05
(O94630) RecName: Full=Uncharacterized actin family protein C134... 50 2e-05
EF490893_1(EF490893|pid:none) Lepeophtheirus salmonis clone LS00... 50 2e-05
(P10671) RecName: Full=Actin-1/3; &AY049293_1(AY049293|pid:none... 50 2e-05
AF234941_1(AF234941|pid:none) Abralia sp. DC-2000 clone 3 actin ... 50 2e-05
AJ315871_1(AJ315871|pid:none) Plasmodium berghei mRNA for actin 3. 50 2e-05
AY305729_1(AY305729|pid:none) Gossypium hirsutum actin (ACT7) mR... 50 2e-05
DQ365852_1(DQ365852|pid:none) Cirrhinus molitorella beta-actin m... 50 2e-05
AF234929_1(AF234929|pid:none) Chiroteuthis veranyi clone 12 acti... 50 2e-05
AF234910_1(AF234910|pid:none) Heteroteuthis hawaiiensis actin ge... 50 2e-05
AL132960_5(AL132960|pid:none) Arabidopsis thaliana DNA chromosom... 50 2e-05
AJ880406_1(AJ880406|pid:none) Porphyridium purpureum partial act... 50 2e-05
AB292769_1(AB292769|pid:none) Porphyra yezoensis PyACT4 mRNA for... 50 2e-05
X03282_1(X03282|pid:none) dictyostelium discoideum gene for acti... 50 2e-05
AF358263_1(AF358263|pid:none) Drosophila virilis actin E2 gene, ... 50 2e-05
X03766_1(X03766|pid:none) Mouse mRNA for sceletal muscle alpha-a... 50 2e-05
DQ238707_1(DQ238707|pid:none) Lythrurus umbratilis beta-actin ge... 50 2e-05
AY893990_1(AY893990|pid:none) Synthetic construct Homo sapiens c... 50 2e-05
(P83967) RecName: Full=Actin, indirect flight muscle; AltName: F... 50 2e-05
AF282625_1(AF282625|pid:none) Setaria italica actin mRNA, partia... 50 2e-05
AF234965_1(AF234965|pid:none) Thysanoteuthis rhombus clone 44 ac... 50 2e-05
(P68133) RecName: Full=Actin, alpha skeletal muscle; AltName: Fu... 50 2e-05
AJ880415_1(AJ880415|pid:none) Nemalionopsis shawii partial act2 ... 50 2e-05
B23412(B23412)actin 12 - slime mold (Dictyostelium discoideum) 50 2e-05
BC152062_1(BC152062|pid:none) Xenopus tropicalis hypothetical pr... 50 2e-05
DQ333330_1(DQ333330|pid:none) Hirudo medicinalis cytoplasmic act... 50 2e-05
(Q9GZN1) RecName: Full=Actin-related protein 6; Short=h... 50 2e-05
AL160004_3(AL160004|pid:none) Human DNA sequence from clone RP5-... 50 2e-05
FJ696416_1(FJ696416|pid:none) Carica papaya actin mRNA, complete... 50 2e-05
EU128481_1(EU128481|pid:none) Tanichthys albonubes beta-actin mR... 50 2e-05
BC045879_1(BC045879|pid:none) Danio rerio bactin2, mRNA (cDNA cl... 50 2e-05
AC004684_12(AC004684|pid:none) Arabidopsis thaliana chromosome 2... 50 2e-05
EU273466_1(EU273466|pid:none) Trichosphaerium sp. ATCC 40318 clo... 50 2e-05
AB039726_1(AB039726|pid:none) Carassius auratus mRNA for beta ac... 50 2e-05
AF302045_1(AF302045|pid:none) Rhodeus notatus beta-actin gene, c... 50 2e-05
AF466279_1(AF466279|pid:none) Tigriopus japonicus beta-actin gen... 50 2e-05
AY763959_1(AY763959|pid:none) Bathysiphon cf. flexilis clone BtA... 50 2e-05
AY289764_1(AY289764|pid:none) Aedes aegypti muscle-specific acti... 50 2e-05
AK300697_1(AK300697|pid:none) Homo sapiens cDNA FLJ53662 complet... 50 2e-05
EU128482_1(EU128482|pid:none) Tanichthys albonubes beta-actin ge... 50 2e-05
AF002690_1(AF002690|pid:none) Podocarpus macrophyllus actin 4 (P... 50 2e-05
AY944136_1(AY944136|pid:none) Didelphis virginiana beta-actin mR... 50 3e-05
AY764025_1(AY764025|pid:none) Globigerinella siphonifera clone T... 50 3e-05
AB107655_1(AB107655|pid:none) Lama glama mRNA for beta actin, pa... 50 3e-05
(P92182) RecName: Full=Actin-1; &JC5227(JC5227) &X96512_1(X9651... 50 3e-05
AF277456_1(AF277456|pid:none) Papilio glaucus actin A1 mRNA, par... 50 3e-05
J04181_1(J04181|pid:none) Mouse A-X actin mRNA, complete cds. 50 3e-05
EU408550_1(EU408550|pid:none) Cryptococcus bacillisporus strain ... 50 3e-05
X00182_1(X00182|pid:none) Gallus gallus cytoplasmic beta-actin g... 50 3e-05
(P15475) RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta ... 50 3e-05
EU529707_1(EU529707|pid:none) Cicer arietinum actin (ACT1) mRNA,... 50 3e-05
U07786_1(U07786|pid:none) Sus scrofa beta actin mRNA, partial cds. 50 3e-05
AB199890_1(AB199890|pid:none) Pagrus major gene for beta cytopla... 50 3e-05
EU035314_1(EU035314|pid:none) Mamestra brassicae beta actin mRNA... 50 3e-05
(Q6P378) RecName: Full=Actin, cytoplasmic 2; AltName: Full=Gamma... 50 3e-05
AK151386_1(AK151386|pid:none) Mus musculus bone marrow macrophag... 50 3e-05
EF455786_1(EF455786|pid:none) Isochrysis galbana clone 2 actin g... 50 3e-05
EU408508_1(EU408508|pid:none) Cryptococcus bacillisporus strain ... 50 3e-05
AK301372_1(AK301372|pid:none) Homo sapiens cDNA FLJ55253 complet... 50 3e-05
AB035660_1(AB035660|pid:none) Branchiostoma belcheri BbNA1 mRNA ... 50 3e-05
AK304552_1(AK304552|pid:none) Homo sapiens cDNA FLJ52842 complet... 50 3e-05
X13055_1(X13055|pid:none) Murine mRNA for cytoplasmic gamma-actin. 50 3e-05
AY763972_1(AY763972|pid:none) Globobulimina turgida clone GoA130... 50 3e-05
(P53470) RecName: Full=Actin-1; &FN357409_27(FN357409|pid:none)... 50 3e-05
(P02576) RecName: Full=Actin, plasmodial isoform; &ATFY(A29044;... 50 3e-05
(P63256) RecName: Full=Actin, cytoplasmic 2; AltName: Full=Gamma... 50 3e-05
EF091836_1(EF091836|pid:none) Lagenorhynchus acutus beta-actin m... 50 3e-05
AF234937_1(AF234937|pid:none) Cycloteuthis sirventi clone 29 act... 50 3e-05
AK151468_1(AK151468|pid:none) Mus musculus bone marrow macrophag... 50 3e-05
(Q2T9W4) RecName: Full=Actin-like protein 7C; &BC111236_1(BC111... 50 3e-05
AK147787_1(AK147787|pid:none) Mus musculus melanocyte cDNA, RIKE... 50 3e-05
AB264725_1(AB264725|pid:none) Papilio xuthus mRNA for actin, com... 50 3e-05
AK151898_1(AK151898|pid:none) Mus musculus bone marrow macrophag... 50 3e-05
AB060287_1(AB060287|pid:none) Lampetra japonica LjCA1 mRNA for c... 50 3e-05
FJ557240_1(FJ557240|pid:none) Agropyron mongolicum actin mRNA, p... 50 3e-05
M12481_1(M12481|pid:none) Mouse cytoplasmic beta-actin mRNA. &X... 50 3e-05
AK223032_1(AK223032|pid:none) Homo sapiens mRNA for beta actin v... 50 3e-05

>(Q54E71) RecName: Full=Actin-related protein 5; AltName:
Full=Actin-related protein E;
Length = 684

Score = 220 bits (561), Expect = 1e-56
Identities = 109/117 (93%), Positives = 110/117 (94%)
Frame = +2

Query: 11 IGEYHXXXDFQVSLGVEXIKCPETLFXPXAIIGVDQMGLVKAIISSILSQLPVDTRKLVT 190
IGEYH DFQVSLGVE IKCPETLF P AIIGVDQMGLV+AIISSILSQLPVDTRKLVT
Sbjct: 536 IGEYHTAEDFQVSLGVERIKCPETLFQPKAIIGVDQMGLVEAIISSILSQLPVDTRKLVT 595

Query: 191 ENIFLTGGNVNTKXFKDRIHYEIQQIREPYSPLTILKSKDSQLDAWLGARKWCLDNQ 361
ENIFLTGGNVNTK FKDRIHYEIQQIREPYSPLTILKSKDSQLDAWLGARKWCLDNQ
Sbjct: 596 ENIFLTGGNVNTKHFKDRIHYEIQQIREPYSPLTILKSKDSQLDAWLGARKWCLDNQ 652

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 572,277,055
Number of extensions: 12104152
Number of successful extensions: 21766
Number of sequences better than 10.0: 1872
Number of HSP's gapped: 20329
Number of HSP's successfully gapped: 1872
Length of query: 120
Length of database: 1,040,966,779
Length adjustment: 86
Effective length of query: 34
Effective length of database: 765,398,269
Effective search space: 26023541146
Effective search space used: 26023541146
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)

PSORT

psg: 0.75 gvh: 0.49 alm: 0.37 top: 0.53 tms: 0.00 mit: 0.16 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: cytoplasmic
32.0 %: nuclear
8.0 %: Golgi
8.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: vesicles of secretory system

>> prediction for Contig-U07413-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0