>Contig-U07176-1 (Contig-U07176-1Q) /CSM_Contig/Contig-U07176-1Q.Seq.d
CTCCACCGCGGTGGGCGGCCGCTCGCGATCTAAGAACTAGCCTGAAGGTC
CAATTCAATTTGATTTACAAACATTTCAAACTTATAAATTTAAATATTTA
AAAAGCTTTTCAAGGTCTTATCCATTAATTACATCTGCCTCAATTATTTC
TGTAAATGATAGTAAAGTTACAATTTTTGGTTCATTCTTTAATAATGAAA
ATAATAATAATAATAATAATAATAATAATACAATTAAACCAATTGTATTA
ATTAATAATATAAATTGTGATATTGTTTCATCAGATAATTTAAGTATAGT
TGCAAGTATACCAAAGTTTAGTCAAGGTGGTTTTACAAATTTAACAGTTA
TTGATAATGGATATTATTTTTCATCACCATTGATAATATTTTATGAAAAA
CCAAAACCAACGGAATGTAATCCATCTTGTGAAAATGGTGGTAAATGTTC
CCAAGGATCTTGTGAATGTGTTGGTGATTATTCTGGTGCAACATGTTCAT
TTATTAAACCTTCAAATTCAACCTATAGTTTAATAATTGATAAAACAAAA
CCAAATGCAAAATATGATATGGAAAAGGGTGCATTTGATTTCTCTTTAAC
AAGTGTTCAAGAATTGGATCTTAATAAGAATGTAGTGAAACAAATTAACA
TAACCC----------AATACAATTTCGCTGGTTATTCATTAAATATTGA
TTCAGGTCAAGTTAAAGTTTTGGTTAATATAAGTAATTGGCAATATGAAA
CATCATTAAATGTTTTACGTGCAGTTTTTAAATCTTCATCATTACCATCG
AATAAAACCTCATCAAGCAATAGTTGTGGTGATTCTGACACTAGTACATT
AGAAACTACAAATAATCAATATAATGCATTGTTATCATTTACATTCCAAA
GAAATGGTGTAATTCTATATGGAGTTTTCATTGATAAAATGCTATCAAAT
GGTAGAGTTGCAATATCAACCGTAGAGTCTTTACCTGATTATGGTGATTC
CAATAATAATTATTTTGGAATAAATATGCCTCATTGTACCATATGTTTAT
TAGATCCAAATTTAGGACCTTTAGTTAATCCAGGTTTTGATTGCTCTGGA
AGACCTTGGGTATAACCTGTGTCATTAGTGGTTTCAATAGTTGGTGCTCT
CATAATTTCAGTGAGTCTTTTTGTTACTTTTAAAAAATATTATATTATTG
CTCGTGATGGTAAAACAATTAAATTCTCTAGAAGAAGAAAATCTAAAAGT
AGTTCAAAAATGTCCACTCAATAGTTTTTATTTTAAAAAAGTAATAAAAT
AAAATTAATTAATTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACA
AAAA

est1=SSH719Z,-29,189
est2=AFG755F,87,657
est3=AFG755Z,658,1313
est4=SSI881Z,690,1321
est5=SSD513Z,782,1346
est6=SSH719F,1098,1335

stavggrsrskn*PEGPIQFDLQTFQTYKFKYLKSFSRSYPLITSASIISVNDSKVTIFG
SFFNNENNNNNNNNNNTIKPIVLINNINCDIVSSDNLSIVASIPKFSQGGFTNLTVIDNG
YYFSSPLIIFYEKPKPTECNPSCENGGKCSQGSCECVGDYSGATCSFIKPSNSTYSLIID
KTKPNAKYDMEKGAFDFSLTSVQELDLNKNVVKQINIT---

---YNFAGYSLNIDSGQVKVLVNISNWQYETSLNVLRAVFKSSSLPSNKTSSSNSCGDSD
TSTLETTNNQYNALLSFTFQRNGVILYGVFIDKMLSNGRVAISTVESLPDYGDSNNNYFG
INMPHCTICLLDPNLGPLVNPGFDCSGRPWV*pvslvvsivgaliisvslfvtfkkyyii
ardgktikfsrrrkskssskmstq*flf*ksnkiklinflkkkkkkkkknk

Frame A:
lhrggrplai*ela*rsnsi*ftnisnl*i*ifkklfkvlsinyiclnyfck***synfw
fil***k*********yn*tncin**ykl*ycfir*fkysckytkv*srwfykfnsy**w
ilffitidnil*ktktngm*sil*kww*mfpril*mcw*lfwcnmfiy*tfkfnl*fnn*
*nktkcki*ygkgci*flfnkcsrigs**ecsetn*hn---

---ntislvih*iliqvklkfwli*vignmkhh*mfyvqflnlhhyhrikphqaivvvil
tlvh*klqiinimhcyhlhskemv*fymefslikcyqmvelqyqp*slylimvipiiiil
e*iclivpyvy*iqi*dl*liqvlialedlgynlch*wfq*lvls*fq*vfllllkniil
llvmvkqlnsleeenlkvvqkcplnsfyfkkvik*n*lif*kkkkkkkkktk

Frame B:
stavggrsrskn*PEGPIQFDLQTFQTYKFKYLKSFSRSYPLITSASIISVNDSKVTIFG
SFFNNENNNNNNNNNNTIKPIVLINNINCDIVSSDNLSIVASIPKFSQGGFTNLTVIDNG
YYFSSPLIIFYEKPKPTECNPSCENGGKCSQGSCECVGDYSGATCSFIKPSNSTYSLIID
KTKPNAKYDMEKGAFDFSLTSVQELDLNKNVVKQINIT---

---iqfrwlfiky*frss*sfg*yk*lai*niikcftcsf*ifiitie*nlikq*lw*f*
h*yirnyk*si*civiiyipkkwcnsiwsfh**naikw*scninrrvft*lw*fq**lfw
nkyaslyhmfirskfrtfs*srf*llwktlgitcvisgfnswcshnfsesfcyf*kilyy
cs*w*nn*il*kkki*k*fknvhsivfilkk**nkin*ffkkkkkkkkkkqk

Frame C:
pprwaaardlrtslkvqfnliykhfklinlni*kafqglih*lhlpqlfl*mivklqflv
hslimkiiiiiiiiiiqlnqly*lii*ivilfhqii*v*lqvyqslvkvvlqi*qllimd
iifhhh**yfmknqnqrnvihlvkmvvnvpkdlvnvlviilvqhvhllnlqiqpiv**li
kqnqmqnmiwkrvhlisl*qvfknwilirm**nklt*p---

---YNFAGYSLNIDSGQVKVLVNISNWQYETSLNVLRAVFKSSSLPSNKTSSSNSCGDSD
TSTLETTNNQYNALLSFTFQRNGVILYGVFIDKMLSNGRVAISTVESLPDYGDSNNNYFG
INMPHCTICLLDPNLGPLVNPGFDCSGRPWV*pvslvvsivgaliisvslfvtfkkyyii
ardgktikfsrrrkskssskmstq*flf*ksnkiklinflkkkkkkkkknk

Query= Contig-U07176-1 (Contig-U07176-1Q)
/CSM_Contig/Contig-U07176-1Q.Seq.d
         (1354 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U07176-1 (Contig-U07176-1Q) /CSM_Contig/Conti...  2097  0.0
Contig-U05051-1 (Contig-U05051-1Q) /CSM_Contig/Conti...    48  3e-05
Contig-U09751-1 (Contig-U09751-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U04421-1 (Contig-U04421-1Q) /CSM_Contig/Conti...    46  1e-04
Contig-U11896-1 (Contig-U11896-1Q) /CSM_Contig/Conti...    44  4e-04
Contig-U13851-1 (Contig-U13851-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U12357-1 (Contig-U12357-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U03803-1 (Contig-U03803-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U02377-1 (Contig-U02377-1Q) /CSM_Contig/Conti...    42  0.002
Contig-U12512-1 (Contig-U12512-1Q) /CSM_Contig/Conti...    40  0.006

>Contig-U07176-1 (Contig-U07176-1Q) /CSM_Contig/Contig-U07176-1Q.Seq.d
          Length = 1354

 Score = 2097 bits (1058), Expect = 0.0
 Identities = 1088/1088 (100%)
 Strand = Plus / Plus

                                                                        
Query: 231  caattaaaccaattgtattaattaataatataaattgtgatattgtttcatcagataatt 290
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231  caattaaaccaattgtattaattaataatataaattgtgatattgtttcatcagataatt 290

                                                                        
Query: 291  taagtatagttgcaagtataccaaagtttagtcaaggtggttttacaaatttaacagtta 350
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291  taagtatagttgcaagtataccaaagtttagtcaaggtggttttacaaatttaacagtta 350

                                                                        
Query: 351  ttgataatggatattatttttcatcaccattgataatattttatgaaaaaccaaaaccaa 410
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351  ttgataatggatattatttttcatcaccattgataatattttatgaaaaaccaaaaccaa 410

                                                                        
Query: 411  cggaatgtaatccatcttgtgaaaatggtggtaaatgttcccaaggatcttgtgaatgtg 470
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411  cggaatgtaatccatcttgtgaaaatggtggtaaatgttcccaaggatcttgtgaatgtg 470

                                                                        
Query: 471  ttggtgattattctggtgcaacatgttcatttattaaaccttcaaattcaacctatagtt 530
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471  ttggtgattattctggtgcaacatgttcatttattaaaccttcaaattcaacctatagtt 530

                                                                        
Query: 531  taataattgataaaacaaaaccaaatgcaaaatatgatatggaaaagggtgcatttgatt 590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531  taataattgataaaacaaaaccaaatgcaaaatatgatatggaaaagggtgcatttgatt 590

                                                                        
Query: 591  tctctttaacaagtgttcaagaattggatcttaataagaatgtagtgaaacaaattaaca 650
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591  tctctttaacaagtgttcaagaattggatcttaataagaatgtagtgaaacaaattaaca 650

                                                                        
Query: 651  taacccnnnnnnnnnnaatacaatttcgctggttattcattaaatattgattcaggtcaa 710
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651  taacccnnnnnnnnnnaatacaatttcgctggttattcattaaatattgattcaggtcaa 710

                                                                        
Query: 711  gttaaagttttggttaatataagtaattggcaatatgaaacatcattaaatgttttacgt 770
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711  gttaaagttttggttaatataagtaattggcaatatgaaacatcattaaatgttttacgt 770

                                                                        
Query: 771  gcagtttttaaatcttcatcattaccatcgaataaaacctcatcaagcaatagttgtggt 830
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771  gcagtttttaaatcttcatcattaccatcgaataaaacctcatcaagcaatagttgtggt 830

                                                                        
Query: 831  gattctgacactagtacattagaaactacaaataatcaatataatgcattgttatcattt 890
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831  gattctgacactagtacattagaaactacaaataatcaatataatgcattgttatcattt 890

                                                                        
Query: 891  acattccaaagaaatggtgtaattctatatggagttttcattgataaaatgctatcaaat 950
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891  acattccaaagaaatggtgtaattctatatggagttttcattgataaaatgctatcaaat 950

                                                                        
Query: 951  ggtagagttgcaatatcaaccgtagagtctttacctgattatggtgattccaataataat 1010
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951  ggtagagttgcaatatcaaccgtagagtctttacctgattatggtgattccaataataat 1010

                                                                        
Query: 1011 tattttggaataaatatgcctcattgtaccatatgtttattagatccaaatttaggacct 1070
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1011 tattttggaataaatatgcctcattgtaccatatgtttattagatccaaatttaggacct 1070

                                                                        
Query: 1071 ttagttaatccaggttttgattgctctggaagaccttgggtataacctgtgtcattagtg 1130
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 ttagttaatccaggttttgattgctctggaagaccttgggtataacctgtgtcattagtg 1130

                                                                        
Query: 1131 gtttcaatagttggtgctctcataatttcagtgagtctttttgttacttttaaaaaatat 1190
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 gtttcaatagttggtgctctcataatttcagtgagtctttttgttacttttaaaaaatat 1190

                                                                        
Query: 1191 tatattattgctcgtgatggtaaaacaattaaattctctagaagaagaaaatctaaaagt 1250
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 tatattattgctcgtgatggtaaaacaattaaattctctagaagaagaaaatctaaaagt 1250

                                                                        
Query: 1251 agttcaaaaatgtccactcaatagtttttattttaaaaaagtaataaaataaaattaatt 1310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 agttcaaaaatgtccactcaatagtttttattttaaaaaagtaataaaataaaattaatt 1310

                    
Query: 1311 aatttttt 1318
            ||||||||
Sbjct: 1311 aatttttt 1318


 Score =  375 bits (189), Expect = e-104
 Identities = 189/189 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctccaccgcggtgggcggccgctcgcgatctaagaactagcctgaaggtccaattcaatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctccaccgcggtgggcggccgctcgcgatctaagaactagcctgaaggtccaattcaatt 60

                                                                       
Query: 61  tgatttacaaacatttcaaacttataaatttaaatatttaaaaagcttttcaaggtctta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgatttacaaacatttcaaacttataaatttaaatatttaaaaagcttttcaaggtctta 120

                                                                       
Query: 121 tccattaattacatctgcctcaattatttctgtaaatgatagtaaagttacaatttttgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccattaattacatctgcctcaattatttctgtaaatgatagtaaagttacaatttttgg 180

                    
Query: 181 ttcattctt 189
           |||||||||
Sbjct: 181 ttcattctt 189


 Score = 32.2 bits (16), Expect = 1.5
 Identities = 16/16 (100%)
 Strand = Plus / Minus

                            
Query: 1301 aaaattaattaatttt 1316
            ||||||||||||||||
Sbjct: 1316 aaaattaattaatttt 1301


>Contig-U05051-1 (Contig-U05051-1Q) /CSM_Contig/Contig-U05051-1Q.Seq.d
          Length = 468

 Score = 48.1 bits (24), Expect = 3e-05
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 1285 aaaaaagtaataaaataaaattaattaa 1312
            |||||||||||||||||||||| |||||
Sbjct: 463  aaaaaagtaataaaataaaatttattaa 436


>Contig-U09751-1 (Contig-U09751-1Q) /CSM_Contig/Contig-U09751-1Q.Seq.d
          Length = 1105

 Score = 46.1 bits (23), Expect = 1e-04
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 1281 ttttaaaaaagtaataaaataaaatta 1307
            |||| ||||||||||||||||||||||
Sbjct: 1069 tttttaaaaagtaataaaataaaatta 1095


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 31,149
Number of Sequences: 6905
Number of extensions: 31149
Number of successful extensions: 4926
Number of sequences better than 10.0: 554
length of query: 1354
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1338
effective length of database: 5,564,391
effective search space: 7445155158
effective search space used: 7445155158
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U07176-1 (Contig-U07176-1Q) /CSM_Contig/Contig-U07176-1Q.Seq.d
         (1354 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...  1136   0.0    1
(BJ342578) Dictyostelium discoideum cDNA clone:dda14n13, 3' ...  1136   0.0    1
(C90657) Dictyostelium discoideum slug cDNA, clone SSI881.       1053   0.0    1
(BJ325469) Dictyostelium discoideum cDNA clone:dda14n13, 5' ...   773   0.0    2
(AU037350) Dictyostelium discoideum slug cDNA, clone SSD513.      642   0.0    2
(AU038437) Dictyostelium discoideum slug cDNA, clone SSH719.      375   3e-99  1
(AU073639) Dictyostelium discoideum slug cDNA, clone SSH719.      264   8e-66  1
(BJ445305) Dictyostelium discoideum cDNA clone:ddv59g05, 3' ...    40   9e-04  3
(AU038784) Dictyostelium discoideum slug cDNA, clone SSL477.       48   9e-04  2
(EV143088) 0209020 Brassica napus Very early anther Brassica...    58   0.001  1
(C91307) Dictyostelium discoideum slug cDNA, clone SSK277.         56   0.001  2
(CO763624) brain_EST06816 Brain cDNA Library Gallus gallus c...    48   0.002  3
(AM438763) Vitis vinifera, whole genome shotgun sequence, co...    46   0.005  4
(CO760854) brain_EST04046 Brain cDNA Library Gallus gallus c...    48   0.005  3
(CO768685) spleen_EST04411 Spleen cDNA Library Gallus gallus...    48   0.006  2
(CO763760) brain_EST06952 Brain cDNA Library Gallus gallus c...    48   0.019  3
(CO770245) testis_EST01342 Testis cDNA Library Gallus gallus...    48   0.022  2
(CO759552) brain_EST02744 Brain cDNA Library Gallus gallus c...    48   0.023  2
(AP009947) Lotus japonicus genomic DNA, clone: LjB15A13, BM1...    52   0.030  6
(CU469211) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    52   0.056  1
(AP010062) Lotus japonicus genomic DNA, clone: LjT17B03, TM0...    52   0.056  1
(AP007529) Lotus japonicus genomic DNA, chromosome 5, clone:...    52   0.056  1
(DU208906) 1098574256783 CHORI-243 Ovis aries genomic clone ...    52   0.056  1
(DN873698) nad28b10.y2 Dog eye cornea. Unnormalized (nad) Ca...    52   0.056  1
(BP518099) Hydra magnipapillata cDNA, clone:hmp_14944.             52   0.056  1
(FE709105) Pv038Dr_M13R_A11.ab1 Phaseolus vulgaris cv Early ...    52   0.056  1
(CO759576) brain_EST02768 Brain cDNA Library Gallus gallus c...    42   0.074  3
(CO770534) testis_EST01631 Testis cDNA Library Gallus gallus...    48   0.082  2
(CO760497) brain_EST03689 Brain cDNA Library Gallus gallus c...    48   0.087  2
(CO770073) testis_EST01170 Testis cDNA Library Gallus gallus...    48   0.094  2
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047...    34   0.15   10
(CT573020) Medicago truncatula chromosome 5 clone mth2-83i12...    44   0.15   7
(C84174) Dictyostelium discoideum slug cDNA, clone SSC420.         36   0.17   3
(EH363666) G05_j001_plate_1 j001 Nicotiana benthamiana cDNA ...    50   0.22   1
(BG900242) HOA36-1-H12 HOA (Human Osteoarthritic Cartilage) ...    50   0.22   1
(EY753208) CS00-C5-003-083-B09-CT.F Sweet orange flower, gre...    50   0.22   1
(EY751225) CS00-C5-003-085-B09-CT.F Sweet orange flower, gre...    50   0.22   1
(EV143298) 0209230 Brassica napus Very early anther Brassica...    50   0.22   1
(EV141174) 0207104 Brassica napus Very early anther Brassica...    50   0.22   1
(AM472887) Vitis vinifera contig VV78X151934.5, whole genome...    40   0.23   3
(AJ894816) Trichoderma harzianum EST, clone L02T34P050R04675.      46   0.25   2
(CS468878) Sequence 69 from Patent EP1748080.                      34   0.28   14
(CS419355) Sequence 69 from Patent WO2006094836.                   34   0.28   14
(CO772070) testis_EST03167 Testis cDNA Library Gallus gallus...    48   0.30   2
(CO767687) spleen_EST03413 Spleen cDNA Library Gallus gallus...    48   0.30   2
(CO767806) spleen_EST03532 Spleen cDNA Library Gallus gallus...    48   0.30   2
(CO762886) brain_EST06078 Brain cDNA Library Gallus gallus c...    48   0.30   2
(CO762954) brain_EST06146 Brain cDNA Library Gallus gallus c...    48   0.30   2
(CO762878) brain_EST06070 Brain cDNA Library Gallus gallus c...    48   0.31   2
(CO768089) spleen_EST03815 Spleen cDNA Library Gallus gallus...    48   0.31   2
(CO761677) brain_EST04869 Brain cDNA Library Gallus gallus c...    48   0.31   2
(CO768555) spleen_EST04281 Spleen cDNA Library Gallus gallus...    48   0.31   2
(CO761496) brain_EST04688 Brain cDNA Library Gallus gallus c...    48   0.31   2
(CO767669) spleen_EST03395 Spleen cDNA Library Gallus gallus...    48   0.32   2
(CO761138) brain_EST04330 Brain cDNA Library Gallus gallus c...    48   0.32   2
(CO767981) spleen_EST03707 Spleen cDNA Library Gallus gallus...    48   0.32   2
(CO766041) spleen_EST01767 Spleen cDNA Library Gallus gallus...    48   0.32   2
(CO762287) brain_EST05479 Brain cDNA Library Gallus gallus c...    48   0.32   2
(CO768213) spleen_EST03939 Spleen cDNA Library Gallus gallus...    48   0.32   2
(CO768870) spleen_EST04596 Spleen cDNA Library Gallus gallus...    48   0.32   2
(CO760050) brain_EST03242 Brain cDNA Library Gallus gallus c...    48   0.32   2
(CO759626) brain_EST02818 Brain cDNA Library Gallus gallus c...    48   0.32   2
(CO759759) brain_EST02951 Brain cDNA Library Gallus gallus c...    48   0.33   2
(CO770174) testis_EST01271 Testis cDNA Library Gallus gallus...    48   0.33   2
(CO763111) brain_EST06303 Brain cDNA Library Gallus gallus c...    48   0.33   2
(CO767112) spleen_EST02838 Spleen cDNA Library Gallus gallus...    48   0.33   2
(CO759922) brain_EST03114 Brain cDNA Library Gallus gallus c...    48   0.33   2
(CO760413) brain_EST03605 Brain cDNA Library Gallus gallus c...    48   0.33   2
(CO762976) brain_EST06168 Brain cDNA Library Gallus gallus c...    48   0.33   2
(CO760196) brain_EST03388 Brain cDNA Library Gallus gallus c...    48   0.33   2
(CO759908) brain_EST03100 Brain cDNA Library Gallus gallus c...    48   0.33   2
(CO772716) testis_EST03813 Testis cDNA Library Gallus gallus...    48   0.34   2
(CO767371) spleen_EST03097 Spleen cDNA Library Gallus gallus...    48   0.34   2
(AC112271) Mus musculus BAC clone RP24-121H20 from chromosom...    46   0.34   3
(CO772503) testis_EST03600 Testis cDNA Library Gallus gallus...    48   0.34   2
(CO759645) brain_EST02837 Brain cDNA Library Gallus gallus c...    48   0.34   2
(CO772595) testis_EST03692 Testis cDNA Library Gallus gallus...    48   0.36   2
(CO760877) brain_EST04069 Brain cDNA Library Gallus gallus c...    48   0.36   2
(AC141832) Apis mellifera clone CH224-62B3, WORKING DRAFT SE...    34   0.49   2
(AL844509) Plasmodium falciparum chromosome 13.                    38   0.53   13
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643...    34   0.58   12
(AM477183) Vitis vinifera contig VV78X063319.43, whole genom...    38   0.58   3
(DT454391) UWA090 cDNA library from early and middle stages ...    38   0.63   2
(C93949) Dictyostelium discoideum slug cDNA, clone SSL895.         38   0.63   2
(AU051933) Dictyostelium discoideum slug cDNA, clone SSC426.       38   0.63   2
(CV675827) ia91b08.k1 Melton Mouse E16 5 Pancreas Library 2 ...    38   0.64   2
(AU037985) Dictyostelium discoideum slug cDNA, clone SSH125.       38   0.64   2
(AU037670) Dictyostelium discoideum slug cDNA, clone SSE156.       38   0.65   2
(AU038821) Dictyostelium discoideum slug cDNA, clone SSL525.       38   0.65   2
(C22604) Oryza sativa Japonica Group cDNA, partial sequence ...    38   0.65   2
(AU174533) Oryza sativa Japonica Group cDNA, partial sequenc...    38   0.66   2
(AU197488) Oryza sativa Japonica Group cDNA, partial sequenc...    38   0.66   2
(BM271975) ig37e03.y1 HR85 islet Homo sapiens cDNA 5' simila...    38   0.67   2
(FH674260) CHO_OF5043xk16f1.ab1 CHO_OF5 Nicotiana tabacum ge...    40   0.69   3
(AU038631) Dictyostelium discoideum slug cDNA, clone SSL278.       38   0.70   2
(AC090224) Homo sapiens chromosome 18 clone RP11-693A18 map ...    38   0.75   6
(AE017308) Mycoplasma mobile 163K complete genome.                 38   0.75   18
(CO760645) brain_EST03837 Brain cDNA Library Gallus gallus c...    42   0.84   3
(AC203187) Rhesus Macaque  BAC CH250-16D1 () complete sequence.    36   0.86   7
(CR384075) Zebrafish DNA sequence from clone DKEY-231E3 in l...    48   0.88   1

>(AC116977) Dictyostelium discoideum chromosome 2 map 5515173-5817331
              strain AX4, complete sequence.
          Length = 302156

 Score = 1136 bits (573), Expect = 0.0
 Identities = 576/577 (99%)
 Strand = Plus / Plus


Query: 667    aatacaatttcgctggttattcattaaatattgattcaggtcaagttaaagttttggtta 726
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100213 aatacaatttcgctggttattcattaaatattgattcaggtcaagttaaagttttggtta 100272


Query: 727    atataagtaattggcaatatgaaacatcattaaatgttttacgtgcagtttttaaatctt 786
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100273 atataagtaattggcaatatgaaacatcattaaatgttttacgtgcagtttttaaatctt 100332


Query: 787    catcattaccatcgaataaaacctcatcaagcaatagttgtggtgattctgacactagta 846
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100333 catcattaccatcgaataaaacctcatcaagcaatagttgtggtgattctgacactagta 100392


Query: 847    cattagaaactacaaataatcaatataatgcattgttatcatttacattccaaagaaatg 906
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100393 cattagaaactacaaataatcaatataatgcattgttatcatttacattccaaagaaatg 100452


Query: 907    gtgtaattctatatggagttttcattgataaaatgctatcaaatggtagagttgcaatat 966
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100453 gtgtaattctatatggagttttcattgataaaatgctatcaaatggtagagttgcaatat 100512


Query: 967    caaccgtagagtctttacctgattatggtgattccaataataattattttggaataaata 1026
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100513 caaccgtagagtctttacctgattatggtgattccaataataattattttggaataaata 100572


Query: 1027   tgcctcattgtaccatatgtttattagatccaaatttaggacctttagttaatccaggtt 1086
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100573 tgcctcattgtaccatatgtttattagatccaaatttaggacctttagttaatccaggtt 100632


Query: 1087   ttgattgctctggaagaccttgggtataacctgtgtcattagtggtttcaatagttggtg 1146
              ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 100633 ttgattgctctggaagaccttgggtattacctgtgtcattagtggtttcaatagttggtg 100692


Query: 1147   ctctcataatttcagtgagtctttttgttacttttaaaaaatattatattattgctcgtg 1206
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100693 ctctcataatttcagtgagtctttttgttacttttaaaaaatattatattattgctcgtg 100752


Query: 1207   atggtaaaacaattaaattctctagaagaagaaaatc 1243
              |||||||||||||||||||||||||||||||||||||
Sbjct: 100753 atggtaaaacaattaaattctctagaagaagaaaatc 100789

 Score =  773 bits (390), Expect(9) = 0.0
 Identities = 390/390 (100%)
 Strand = Plus / Plus


Query: 267    gtgatattgtttcatcagataatttaagtatagttgcaagtataccaaagtttagtcaag 326
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99706  gtgatattgtttcatcagataatttaagtatagttgcaagtataccaaagtttagtcaag 99765


Query: 327    gtggttttacaaatttaacagttattgataatggatattatttttcatcaccattgataa 386
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99766  gtggttttacaaatttaacagttattgataatggatattatttttcatcaccattgataa 99825


Query: 387    tattttatgaaaaaccaaaaccaacggaatgtaatccatcttgtgaaaatggtggtaaat 446
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99826  tattttatgaaaaaccaaaaccaacggaatgtaatccatcttgtgaaaatggtggtaaat 99885


Query: 447    gttcccaaggatcttgtgaatgtgttggtgattattctggtgcaacatgttcatttatta 506
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99886  gttcccaaggatcttgtgaatgtgttggtgattattctggtgcaacatgttcatttatta 99945


Query: 507    aaccttcaaattcaacctatagtttaataattgataaaacaaaaccaaatgcaaaatatg 566
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99946  aaccttcaaattcaacctatagtttaataattgataaaacaaaaccaaatgcaaaatatg 100005


Query: 567    atatggaaaagggtgcatttgatttctctttaacaagtgttcaagaattggatcttaata 626
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100006 atatggaaaagggtgcatttgatttctctttaacaagtgttcaagaattggatcttaata 100065


Query: 627    agaatgtagtgaaacaaattaacataaccc 656
              ||||||||||||||||||||||||||||||
Sbjct: 100066 agaatgtagtgaaacaaattaacataaccc 100095

 Score =  295 bits (149), Expect(9) = 0.0
 Identities = 149/149 (100%)
 Strand = Plus / Plus


Query: 41    cctgaaggtccaattcaatttgatttacaaacatttcaaacttataaatttaaatattta 100
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99480 cctgaaggtccaattcaatttgatttacaaacatttcaaacttataaatttaaatattta 99539


Query: 101   aaaagcttttcaaggtcttatccattaattacatctgcctcaattatttctgtaaatgat 160
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99540 aaaagcttttcaaggtcttatccattaattacatctgcctcaattatttctgtaaatgat 99599


Query: 161   agtaaagttacaatttttggttcattctt 189
             |||||||||||||||||||||||||||||
Sbjct: 99600 agtaaagttacaatttttggttcattctt 99628

 Score = 28.2 bits (14), Expect(9) = 0.0
 Identities = 20/22 (90%)
 Strand = Plus / Plus


Query: 700    attcaggtcaagttaaagtttt 721
              |||||| || ||||||||||||
Sbjct: 104011 attcagatccagttaaagtttt 104032

 Score = 28.2 bits (14), Expect(9) = 0.0
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 1211   taaaacaattaaat 1224
              ||||||||||||||
Sbjct: 260438 taaaacaattaaat 260451

 Score = 26.3 bits (13), Expect(9) = 0.0
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 755    attaaatgtttta 767
              |||||||||||||
Sbjct: 158288 attaaatgtttta 158300

 Score = 26.3 bits (13), Expect(9) = 0.0
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 858    acaaataatcaat 870
              |||||||||||||
Sbjct: 167160 acaaataatcaat 167172

 Score = 26.3 bits (13), Expect(9) = 0.0
 Identities = 16/17 (94%)
 Strand = Plus / Plus


Query: 888    tttacattccaaagaaa 904
              ||||| |||||||||||
Sbjct: 230362 tttactttccaaagaaa 230378

 Score = 26.3 bits (13), Expect(9) = 0.0
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 1004   taataattatttt 1016
              |||||||||||||
Sbjct: 233949 taataattatttt 233961

 Score = 26.3 bits (13), Expect(9) = 0.0
 Identities = 13/13 (100%)
 Strand = Plus / Plus


Query: 1185   aaatattatatta 1197
              |||||||||||||
Sbjct: 244603 aaatattatatta 244615

 Score = 61.9 bits (31), Expect(17) = 4e-10
 Identities = 40/43 (93%)
 Strand = Plus / Minus


Query: 927   ttcattgataaaatgctatcaaatggtagagttgcaatatcaa 969
             |||||||||| |||| | |||||||||||||||||||||||||
Sbjct: 57383 ttcattgatagaatgatttcaaatggtagagttgcaatatcaa 57341

 Score = 34.2 bits (17), Expect(17) = 4e-10
 Identities = 29/33 (87%)
 Strand = Plus / Minus


Query: 877   cattgttatcatttacattccaaagaaatggtg 909
             |||| ||||||||||||||   |||||||||||
Sbjct: 57433 cattattatcatttacattaacaagaaatggtg 57401

 Score = 32.2 bits (16), Expect(17) = 4e-10
 Identities = 19/20 (95%)
 Strand = Plus / Minus


Query: 1168  tttttgttacttttaaaaaa 1187
             |||||||||||| |||||||
Sbjct: 54520 tttttgttacttataaaaaa 54501

 Score = 30.2 bits (15), Expect(17) = 4e-10
 Identities = 15/15 (100%)
 Strand = Plus / Minus


Query: 306    gtataccaaagttta 320
              |||||||||||||||
Sbjct: 129315 gtataccaaagttta 129301

 Score = 30.2 bits (15), Expect(17) = 4e-10
 Identities = 15/15 (100%)
 Strand = Plus / Minus


Query: 153    taaatgatagtaaag 167
              |||||||||||||||
Sbjct: 212264 taaatgatagtaaag 212250

 Score = 28.2 bits (14), Expect(17) = 4e-10
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 489    caacatgttcattt 502
              ||||||||||||||
Sbjct: 123014 caacatgttcattt 123001

 Score = 28.2 bits (14), Expect(17) = 4e-10
 Identities = 14/14 (100%)
 Strand = Plus / Minus


Query: 91     taaatatttaaaaa 104
              ||||||||||||||
Sbjct: 233131 taaatatttaaaaa 233118

 Score = 26.3 bits (13), Expect(17) = 4e-10
 Identities = 16/17 (94%)
 Strand = Plus / Minus


Query: 1211  taaaacaattaaattct 1227
             |||| ||||||||||||
Sbjct: 42261 taaatcaattaaattct 42245

 Score = 26.3 bits (13), Expect(17) = 4e-10
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 1050  ttagatccaaatt 1062
             |||||||||||||
Sbjct: 57266 ttagatccaaatt 57254

 Score = 26.3 bits (13), Expect(17) = 4e-10
 Identities = 19/21 (90%)
 Strand = Plus / Minus


Query: 1010  ttattttggaataaatatgcc 1030
             |||| |||| |||||||||||
Sbjct: 57306 ttatgttggtataaatatgcc 57286

 Score = 26.3 bits (13), Expect(17) = 4e-10
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 800   gaataaaacctca 812
             |||||||||||||
Sbjct: 69350 gaataaaacctca 69338

 Score = 26.3 bits (13), Expect(17) = 4e-10
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 692   aaatattgattca 704
             |||||||||||||
Sbjct: 73242 aaatattgattca 73230

 Score = 26.3 bits (13), Expect(17) = 4e-10
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 636   tgaaacaaattaa 648
             |||||||||||||
Sbjct: 97852 tgaaacaaattaa 97840

 Score = 26.3 bits (13), Expect(17) = 4e-10
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 384    taatattttatga 396
              |||||||||||||
Sbjct: 126127 taatattttatga 126115

 Score = 26.3 bits (13), Expect(17) = 4e-10
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 83     tataaatttaaat 95
              |||||||||||||
Sbjct: 247479 tataaatttaaat 247467

 Score = 26.3 bits (13), Expect(17) = 4e-10
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 64     tttacaaacattt 76
              |||||||||||||
Sbjct: 255525 tttacaaacattt 255513

 Score = 26.3 bits (13), Expect(17) = 4e-10
 Identities = 13/13 (100%)
 Strand = Plus / Minus


Query: 51     caattcaatttga 63
              |||||||||||||
Sbjct: 300177 caattcaatttga 300165

 Score = 48.1 bits (24), Expect(2) = 2e-07
 Identities = 33/36 (91%)
 Strand = Plus / Minus


Query: 468   gtgttggtgattattctggtgcaacatgttcattta 503
             ||||||||||||||| |||| |||||||| ||||||
Sbjct: 57943 gtgttggtgattattatggtccaacatgtacattta 57908

 Score = 40.1 bits (20), Expect(2) = 2e-07
 Identities = 20/20 (100%)
 Strand = Plus / Minus


Query: 422   ccatcttgtgaaaatggtgg 441
             ||||||||||||||||||||
Sbjct: 57992 ccatcttgtgaaaatggtgg 57973

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,549,297,175
Number of extensions: 99146268
Number of successful extensions: 9155449
Number of sequences better than 10.0: 2023
Length of query: 1354
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1330
Effective length of database: 97,308,875,965
Effective search space: 129420805033450
Effective search space used: 129420805033450
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U07176-1 (Contig-U07176-1Q) /CSM_Contig/Contig-U07176-1Q.Seq.d
         (1354 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromoso...    95   5e-18
AC117081_39(AC117081|pid:none) Dictyostelium discoideum chromoso...    93   2e-17
AC117081_43(AC117081|pid:none) Dictyostelium discoideum chromoso...    84   9e-15
AC117075_41(AC117075|pid:none) Dictyostelium discoideum chromoso...    83   3e-14
AC116960_61(AC116960|pid:none) Dictyostelium discoideum chromoso...    82   4e-14
AC116982_41(AC116982|pid:none) Dictyostelium discoideum chromoso...    82   6e-14
AC116956_34(AC116956|pid:none) Dictyostelium discoideum chromoso...    79   4e-13
AC117075_64(AC117075|pid:none) Dictyostelium discoideum chromoso...    74   1e-11
AC116920_24(AC116920|pid:none) Dictyostelium discoideum chromoso...    70   2e-10
AC116920_20(AC116920|pid:none) Dictyostelium discoideum chromoso...    68   7e-10
AC116920_25(AC116920|pid:none) Dictyostelium discoideum chromoso...    68   7e-10
AC116967_8(AC116967|pid:none) Dictyostelium discoideum chromosom...    65   4e-09
AC116967_7(AC116967|pid:none) Dictyostelium discoideum chromosom...    65   6e-09
AC117075_42(AC117075|pid:none) Dictyostelium discoideum chromoso...    52   5e-05
AC117075_65(AC117075|pid:none) Dictyostelium discoideum chromoso...    51   1e-04
AC117080_18(AC117080|pid:none) Dictyostelium discoideum chromoso...    45   0.006
AC115605_7(AC115605|pid:none) Dictyostelium discoideum chromosom...    40   0.19
BC154909_1(BC154909|pid:none) Xenopus tropicalis WNT inhibitory ...    39   0.33
AY805407_1(AY805407|pid:none) Danio rerio notch1b mRNA, complete...    39   0.43
(Q9W6F8) RecName: Full=Wnt inhibitory factor 1;          Short=W...    39   0.43
AC115598_37(AC115598|pid:none) Dictyostelium discoideum chromoso...    39   0.56
(P46530) RecName: Full=Neurogenic locus notch homolog protein 1;...    39   0.56
AC116963_25(AC116963|pid:none) Dictyostelium discoideum chromoso...    39   0.56
X08030_1(X08030|pid:none) Chicken mRNA fragment for tenascin (cT...    39   0.56
CU459119_1(CU459119|pid:none) Zebrafish DNA sequence from clone ...    39   0.56
AL110498_8(AL110498|pid:none) Caenorhabditis elegans YAC Y64G10A...    38   0.73
AJ566620_1(AJ566620|pid:none) Paramecium tetraurelia macronuclea...    38   0.73
T27283(T27283)hypothetical protein Y64G10A.f - Caenorhabditis el...    38   0.73
AK122555_1(AK122555|pid:none) Mus musculus mRNA for mKIAA1781 pr...    38   0.96
(Q80T91) RecName: Full=Multiple epidermal growth factor-like dom...    38   0.96
AB058677_1(AB058677|pid:none) Homo sapiens mRNA for MEGF11 prote...    38   0.96
AB300051_1(AB300051|pid:none) Homo sapiens mRNA for MEGF11, comp...    38   0.96
BC117419_1(BC117419|pid:none) Homo sapiens multiple EGF-like-dom...    38   0.96
AL834326_1(AL834326|pid:none) Homo sapiens mRNA; cDNA DKFZp434L1...    38   0.96
AK051642_1(AK051642|pid:none) Mus musculus 12 days embryo spinal...    38   0.96
AB210038_1(AB210038|pid:none) Homo sapiens mRNA for TNC variant ...    37   1.3
M24630_1(M24630|pid:none) Human hexabrachion mRNA, partial cds.        37   1.3
AB011402_1(AB011402|pid:none) Hemicentrotus pulcherrimus mRNA fo...    37   1.3
(P24821) RecName: Full=Tenascin;          Short=TN; AltName: Ful...    37   1.3
X56160_1(X56160|pid:none) Human mRNA for tenascin.                     37   1.3
BC151843_1(BC151843|pid:none) Homo sapiens tenascin C, mRNA (cDN...    37   1.3
AK304015_1(AK304015|pid:none) Homo sapiens cDNA FLJ60213 complet...    37   1.3
CP000689_6(CP000689|pid:none) Acidiphilium cryptum JF-5 plasmid ...    37   1.6
AF499438_1(AF499438|pid:none) Caenorhabditis briggsae notch-like...    37   1.6
BC124112_1(BC124112|pid:none) Danio rerio zgc:171352, mRNA (cDNA...    37   1.6
BC154429_1(BC154429|pid:none) Danio rerio zgc:171352, mRNA (cDNA...    37   1.6
BC155681_1(BC155681|pid:none) Xenopus tropicalis hypothetical pr...    37   1.6
BC134120_1(BC134120|pid:none) Danio rerio zgc:171352, mRNA (cDNA...    37   1.6
BC135592_1(BC135592|pid:none) Xenopus tropicalis delta-like 1, m...    37   1.6
BC095748_1(BC095748|pid:none) Danio rerio zgc:171352, mRNA (cDNA...    37   1.6
Y12539_1(Y12539|pid:none) Branchiostoma floridae mRNA for putati...    37   2.1
(Q80YX1) RecName: Full=Tenascin;          Short=TN; AltName: Ful...    37   2.1
AC116924_8(AC116924|pid:none) Dictyostelium discoideum chromosom...    37   2.1
AF031525_1(AF031525|pid:none) Mus musculus Del1 minor splice var...    37   2.1
(O35474) RecName: Full=EGF-like repeat and discoidin I-like doma...    37   2.1
I50719(I50719) C-Delta-1 - chicken  &U26590_1(U26590|pid:none)         37   2.1
AL732556_3(AL732556|pid:none) Mouse DNA sequence from clone RP24...    37   2.1
AK036117_1(AK036117|pid:none) Mus musculus 16 days neonate cereb...    37   2.1
AL732556_1(AL732556|pid:none) Mouse DNA sequence from clone RP24...    37   2.1
BX005301_9(BX005301|pid:none) Zebrafish DNA sequence from clone ...    36   2.8
AB001327_1(AB001327|pid:none) Halocynthia roretzi mRNA for HrNot...    36   2.8
T21694(T21694)hypothetical protein F33C8.1 - Caenorhabditis eleg...    36   2.8
(Q19981) RecName: Full=Putative protein tag-53; Flags: Precursor...    36   2.8
AB010266_2(AB010266|pid:none) Mus musculus Creb-rp, Tnx, Cyp21 g...    36   2.8
AC116100_9(AC116100|pid:none) Dictyostelium discoideum chromosom...    36   2.8
Z69790_3(Z69790|pid:none) Caenorhabditis elegans Cosmid F33C8, c...    36   2.8
AF333769_1(AF333769|pid:none) Homo sapiens cell recognition mole...    36   3.6
AB385498_1(AB385498|pid:none) Synthetic construct DNA, clone: pF...    36   3.6
AK056833_1(AK056833|pid:none) Homo sapiens cDNA FLJ32271 fis, cl...    36   3.6
BC132737_1(BC132737|pid:none) Homo sapiens contactin associated ...    36   3.6
(Q9H7W3) RecName: Full=Contactin-associated protein-like 3B; Alt...    36   3.6
(Q9UHF1) RecName: Full=EGF-like domain-containing protein 7; Alt...    36   3.6
(Q8N2E2) RecName: Full=Von Willebrand factor D and EGF domain-co...    36   3.6
A35844(A35844)Xotch protein - African clawed frog                      36   3.6
(P21783) RecName: Full=Neurogenic locus notch protein homolog;  ...    36   3.6
AX133831_1(AX133831|pid:none) Sequence 17 from Patent WO0119856.       36   3.6
EU596506_1(EU596506|pid:none) Rattus norvegicus tenascin C (Tnc)...    36   3.6
AL162501_4(AL162501|pid:none) Human DNA sequence from clone RP11...    36   3.6
AX367152_1(AX367152|pid:none) Sequence 1 from Patent WO0204599.        36   3.6
BX649569_3(BX649569|pid:none) Human DNA sequence from clone RP11...    36   3.6
BX649569_1(BX649569|pid:none) Human DNA sequence from clone RP11...    36   3.6
T20058(T20058) hypothetical protein C49C3.4 - Caenorhabditis ele...    35   4.8
AE014298_1834(AE014298|pid:none) Drosophila melanogaster chromos...    35   4.8
CR759822_3(CR759822|pid:none) Zebrafish DNA sequence from clone ...    35   4.8
(Q6L711) RecName: Full=Hyaluronan-binding protein 2;          EC...    35   4.8
AB020675_1(AB020675|pid:none) Homo sapiens mRNA for KIAA0868 pro...    35   4.8
(Q9CPW0) RecName: Full=Contactin-associated protein-like 2; AltN...    35   4.8
(Q9UHC6) RecName: Full=Contactin-associated protein-like 2; AltN...    35   4.8
AB194048_1(AB194048|pid:none) Canis lupus familiaris slit2mRNA f...    35   4.8
AF463419_1(AF463419|pid:none) Naegleria gruberi basal body prote...    35   4.8
AK129232_1(AK129232|pid:none) Mus musculus mRNA for mKIAA0868 pr...    35   4.8
AB095016_1(AB095016|pid:none) Cynops pyrrhogaster Notch-1 mRNA f...    35   4.8
X68794_1(X68794|pid:none) Drosophila melanogaster mRNA for type ...    35   4.8
AC004896_1(AC004896|pid:none) Homo sapiens PAC clone RP4-811H12 ...    35   4.8
AY751775_1(AY751775|pid:none) Xenopus laevis alpha2-macroglobuli...    35   4.8
AF387320_1(AF387320|pid:none) Gallus gallus slit-2 mRNA, partial...    35   4.8
BX890618_1(BX890618|pid:none) Zebrafish DNA sequence from clone ...    35   4.8
BX088690_1(BX088690|pid:none) Zebrafish DNA sequence from clone ...    35   4.8
AC012647_8(AC012647|pid:none) Trypanosoma brucei chromosome 2 cl...    35   6.2
BC145488_1(BC145488|pid:none) Mus musculus slit homolog 2 (Droso...    35   6.2
AB177798_1(AB177798|pid:none) Homo sapiens FBN3 gene for fibrill...    35   6.2
AB013074_1(AB013074|pid:none) Cyprinus carpio mRNA for integrin ...    35   6.2
AB299015_1(AB299015|pid:none) Haemaphysalis longicornis mRNA for...    35   6.2
AB209873_1(AB209873|pid:none) Homo sapiens mRNA for notch1 prepr...    35   6.2
AB177799_1(AB177799|pid:none) Homo sapiens FBN3 gene for fibrill...    35   6.2
AB384635_1(AB384635|pid:none) Synthetic construct DNA, clone: pF...    35   6.2
AF308602_1(AF308602|pid:none) Homo sapiens NOTCH 1 (N1) mRNA, co...    35   6.2
FN357711_14(FN357711|pid:none) Schistosoma mansoni genome sequen...    35   6.2
(Q75N90) RecName: Full=Fibrillin-3; Flags: Precursor;  &AY165863...    35   6.2
BC118139_1(BC118139|pid:none) Bos taurus WNT inhibitory factor 1...    35   6.2
AF074960_1(AF074960|pid:none) Mus musculus neurogenic extracellu...    35   6.2
BC059267_1(BC059267|pid:none) Mus musculus slit homolog 2 (Droso...    35   6.2
(Q9R1B9) RecName: Full=Slit homolog 2 protein;          Short=Sl...    35   6.2
AF195418_1(AF195418|pid:none) Mus musculus ODZ3 (Odz3) mRNA, par...    35   6.2
AK220505_1(AK220505|pid:none) Mus musculus mRNA for mKIAA4141 pr...    35   6.2
(P46531) RecName: Full=Neurogenic locus notch homolog protein 1;...    35   6.2
BC145487_1(BC145487|pid:none) Mus musculus slit homolog 2 (Droso...    35   6.2
(Q54JA3) RecName: Full=Integrin beta-like protein E; Flags: Prec...    35   6.2
AL805948_1(AL805948|pid:none) Mouse DNA sequence from clone RP23...    35   6.2
(Q9JI18) RecName: Full=Low-density lipoprotein receptor-related ...    35   6.2
(Q9WTS6) RecName: Full=Teneurin-3;          Short=Ten-3; AltName...    35   6.2
CR954212_161(CR954212|pid:none) Ostreococcus tauri strain OTTH05...    35   6.2
AF055585_1(AF055585|pid:none) Homo sapiens neurogenic extracellu...    35   8.1
(Q9DER5) RecName: Full=Teneurin-2;          Short=Ten-2; AltName...    35   8.1
AE013599_2241(AE013599|pid:none) Drosophila melanogaster chromos...    35   8.1
BC129830_1(BC129830|pid:none) Homo sapiens tenascin R (restricti...    35   8.1
AY845260_1(AY845260|pid:none) Mytilus edulis clone 2 foot protei...    35   8.1
(P24014) RecName: Full=Protein slit;          Short=dSlit; Conta...    35   8.1
(Q9P273) RecName: Full=Teneurin-3;          Short=Ten-3; AltName...    35   8.1
A48825(A48825)Notch homolog Motch protein - mouse (fragment)           35   8.1
S18188(S18188)notch protein homolog - rat                              35   8.1
AB100603_1(AB100603|pid:none) Mus musculus Notch1 gene for trans...    35   8.1
X98085_1(X98085|pid:none) H.sapiens mRNA for tenascin-R.               35   8.1
(O94813) RecName: Full=Slit homolog 2 protein;          Short=Sl...    35   8.1
DQ103506_1(DQ103506|pid:none) Dermacentor variabilis vitellogeni...    35   8.1
BC143978_1(BC143978|pid:none) Homo sapiens slit homolog 2 (Droso...    35   8.1
AB100603_2(AB100603|pid:none) Mus musculus Notch1 gene for trans...    35   8.1
AL035436_2(AL035436|pid:none) Drosophila melanogaster cosmid clo...    35   8.1
AF210321_1(AF210321|pid:none) Danio rerio Slit2 (slit2) mRNA, co...    35   8.1
AF126540_1(AF126540|pid:none) Drosophila melanogaster slit prote...    35   8.1
(Q01705) RecName: Full=Neurogenic locus notch homolog protein 1;...    35   8.1
A36665(A36665;A31640;S13523) slit protein 1 precursor - fruit fl...    35   8.1
(P13508) RecName: Full=Protein glp-1; Flags: Precursor;  &A32901...    35   8.1
M23543_1(M23543|pid:none) Drosophila melanogaster slit locus enc...    35   8.1
M16152_1(M16152|pid:none) Drosophila melanogaster Notch growth f...    35   8.1
AF508809_1(AF508809|pid:none) Mus musculus notch 1 protein mRNA,...    35   8.1
Z94055_1(Z94055|pid:none) Human DNA sequence from clone RP1-24M1...    35   8.1

>AC116963_42(AC116963|pid:none) Dictyostelium discoideum chromosome 2
            map 4657875-4914984 strain AX4, complete sequence.
          Length = 1501

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 57/183 (31%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
 Frame = +3

Query: 669  YNFAGYSLNIDSGQVKVLVNISNWQYETSLNVLRAVFXXXXXXXXXXXXXXXXXXXXXXT 848
            Y FAG +L ID G +K+ V+I N+QYE++LN L+  F                      +
Sbjct: 1294 YTFAGMNLEIDQGGLKISVSIKNYQYESALNTLQLRFLSSAGETSNLDSEEDNSCNQHES 1353

Query: 849  -LETTNNQYNALLSF-TFQRNGVILYGVFIDKMLSNGRVAISTVESLPDYGDSNNNYFGI 1022
              +T+N   N  L++ +  +N  IL G FI+K++S+GR    + E + D   S+    G+
Sbjct: 1354 ESDTSNIDPNLTLNYISISKNSKILSGRFINKVVSDGRSTFMSSEIVKDLSSSSTIVVGL 1413

Query: 1023 NMPHCT-ICLLDPNLGPLVNPGFDCS------GRPWV*PVSLVVSIVGALIISVSLFVTF 1181
            N+PHC+  C +DP+   LV+P F+ S       + WV PV++VV +V   ++++   + +
Sbjct: 1414 NLPHCSNECFIDPDFSVLVSPNFESSCGNSETKKNWVIPVAVVVPVVCVSLLTLGAILIY 1473

Query: 1182 KKY 1190
            +K+
Sbjct: 1474 RKH 1476

 Score = 47.4 bits (111), Expect = 0.001
 Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 7/157 (4%)
 Frame = +2

Query: 128  ITSASIISVNDSKVTIFGSFFXXXXXXXXXXXXXTIKPIVLINNINC-DIVSSDNLSIVA 304
            ++S    + +  +VTI+G F               I   V I  + C D + ++N +I+
Sbjct: 1097 LSSIDPCTTSGGQVTIYGWFSNQH-----------INLTVTIGGVECVDPIETEN-TIIC 1144

Query: 305  SIPKFSQGGFTNLTVIDNGYYFSSPLIIFYEKPKPTECNPSCENGGKC--SQGSCECVGD 478
             +P  S  G  ++ +  NG  F       Y      +C   C N GKC  S G C C  D
Sbjct: 1145 ELPAGS--GTKDVNITQNGSSFIGKNKFQYISTV-FKCPKDCSNHGKCDTSIGVCTCSSD 1201

Query: 479  YSGATCSFIKP----SNSTYSLIIDKTKPNAKYDMEK 577
            YSG  CS +KP    S+ST S  I     N +  + K
Sbjct: 1202 YSGFDCSSLKPPTTSSSSTTSTTIGGETKNQEIPVSK 1238

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,837,950,717
Number of extensions: 34305329
Number of successful extensions: 79636
Number of sequences better than 10.0: 147
Number of HSP's gapped: 79312
Number of HSP's successfully gapped: 179
Length of query: 451
Length of database: 1,040,966,779
Length adjustment: 132
Effective length of query: 319
Effective length of database: 618,001,159
Effective search space: 197142369721
Effective search space used: 197142369721
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.75  gvh: 0.40  alm: 0.43  top: 0.53  tms: 0.00  mit: 0.15  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 36.0 %: nuclear
	  8.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: mitochondrial

>> prediction for Contig-U07176-1 is cyt