| Contig-U07069-1 |
| Contig ID |
Contig-U07069-1 |
| Contig update |
2001. 8.30 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
597 |
| Chromosome number (1..6, M) |
5 |
| Chromosome length |
5062330 |
| Start point |
4377153 |
| End point |
4376556 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
1 |
| Number of EST |
1 |
| Link to clone list |
U07069 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.11 |
| Homology vs DNA |
|
| protein update |
2009. 6.23 |
| Homology vs Protein |
Query= Contig-U07069-1 (Contig-U07069-1Q) /CSM_Contig/Contig-U07069-1Q.Seq.d
(597 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q57045) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 57 3e-07
(Q16BL5) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 57 3e-07
(Q4QM07) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 57 4e-07
(Q5GT39) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 55 1e-06
AE016823_3088(AE016823|pid:none) Leptospira interrogans serovar ... 55 2e-06
(Q31GX8) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 54 3e-06
(P57809) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 53 6e-06
AE010300_3974(AE010300|pid:none) Leptospira interrogans serovar ... 53 6e-06
(B3CM46) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 52 1e-05
(Q6FEW7) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 52 2e-05
(Q7VPB7) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 52 2e-05
(Q1LSU2) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 52 2e-05
AC116668_37(AC116668|pid:none) Trypanosoma brucei chromosome 5 c... 51 3e-05
(Q92IV0) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 51 3e-05
(B7H0U1) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 51 3e-05
(P61787) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 50 5e-05
(A4SIW4) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 50 5e-05
(A0KG29) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 50 5e-05
(Q9ZDT9) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 50 5e-05
(A5FWY8) Probable (di)nucleoside polyphosphate hydrolase (EC 3.6... 50 6e-05
(Q12KG5) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 50 6e-05
(B0UWT4) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 49 8e-05
CP001328_112(CP001328|pid:none) Micromonas sp. RCC299 chromosome... 49 8e-05
(A8GRA7) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 49 1e-04
(A1SS92) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 49 1e-04
CP000348_2370(CP000348|pid:none) Leptospira borgpetersenii serov... 49 1e-04
(Q65VJ5) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 49 1e-04
CP001227_191(CP001227|pid:none) Rickettsia peacockii str. Rustic... 49 1e-04
CP001091_1984(CP001091|pid:none) Actinobacillus pleuropneumoniae... 49 1e-04
AC074176_9(AC074176|pid:none) Arabidopsis thaliana chromosome 1 ... 49 1e-04
(A8GW83) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 49 1e-04
AM462910_1(AM462910|pid:none) Vitis vinifera contig VV78X047352.... 49 1e-04
CP000687_1884(CP000687|pid:none) Actinobacillus pleuropneumoniae... 49 1e-04
CP001321_1980(CP001321|pid:none) Haemophilus parasuis SH0165, co... 48 2e-04
(Q2N9Y3) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 48 2e-04
(Q9RH11) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 48 2e-04
(B0TIU1) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 47 3e-04
(A0KZP9) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 47 3e-04
AY752491_1(AY752491|pid:none) Rickettsia rickettsii nudix hydrol... 47 3e-04
(Q8EH98) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 47 4e-04
(A8H1B1) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 47 4e-04
CP000683_233(CP000683|pid:none) Rickettsia massiliae MTU5, compl... 47 4e-04
(Q0HG81) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 47 4e-04
CP000319_515(CP000319|pid:none) Nitrobacter hamburgensis X14, co... 47 4e-04
CP000786_3244(CP000786|pid:none) Leptospira biflexa serovar Pato... 47 5e-04
(A2SD39) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 47 5e-04
AY752493_1(AY752493|pid:none) Rickettsia canadensis nudix hydrol... 47 5e-04
(Q07YY0) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 47 5e-04
(A1RME4) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 47 5e-04
(Q47Y27) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 47 5e-04
AY752492_1(AY752492|pid:none) Rickettsia akari nudix hydrolase (... 46 7e-04
CP000961_1219(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 46 7e-04
(A1TTD1) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 46 7e-04
(B0TX27) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 46 7e-04
(Q5F753) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 46 9e-04
AE004969_1211(AE004969|pid:none) Neisseria gonorrhoeae FA 1090, ... 46 9e-04
CP001103_3682(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 46 9e-04
CP000390_3415(CP000390|pid:none) Mesorhizobium sp. BNC1, complet... 45 0.001
(Q9JT78) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 45 0.001
CP000507_858(CP000507|pid:none) Shewanella amazonensis SB2B, com... 45 0.001
(Q3J9L7) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 45 0.002
(A3QBR1) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 45 0.002
CP000377_2456(CP000377|pid:none) Silicibacter sp. TM1040, comple... 45 0.002
AM942759_2298(AM942759|pid:none) Proteus mirabilis strain HI4320... 45 0.002
CP000915_182(CP000915|pid:none) Francisella tularensis subsp. me... 45 0.002
CP000158_3148(CP000158|pid:none) Hyphomonas neptunium ATCC 15444... 45 0.002
(Q9JY96) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 45 0.002
(A6VMA3) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 45 0.002
(A1WKI2) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 44 0.003
CP001280_629(CP001280|pid:none) Methylocella silvestris BL2, com... 44 0.003
CP000316_823(CP000316|pid:none) Polaromonas sp. JS666, complete ... 44 0.003
CP001016_2839(CP001016|pid:none) Beijerinckia indica subsp. indi... 44 0.003
CU459003_1372(CU459003|pid:none) Magnetospirillum gryphiswaldens... 44 0.003
CP000439_1506(CP000439|pid:none) Francisella tularensis subsp. n... 44 0.003
BT071048_1(BT071048|pid:none) Picea sitchensis clone WS02768_N03... 44 0.003
(A5II45) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 44 0.004
CP001157_4659(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 44 0.004
(A4SVA6) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 44 0.004
CP000482_720(CP000482|pid:none) Pelobacter propionicus DSM 2379,... 44 0.004
(A1W4B2) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 44 0.004
(B6JD11) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 43 0.006
CP001096_166(CP001096|pid:none) Rhodopseudomonas palustris TIE-1... 43 0.006
(Q1GZE7) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 43 0.006
CP000356_1537(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 43 0.006
(Q3IDL9) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 43 0.008
(A7MR28) RNA pyrophosphohydrolase (EC 3.6.1.-) ((Di)nucleoside p... 43 0.008
(Q5FU29) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 43 0.008
(A5CD16) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 43 0.008
CP001154_601(CP001154|pid:none) Laribacter hongkongensis HLHK9, ... 43 0.008
(P35640) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 43 0.008
(A4WWV6) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 42 0.010
AM502223_16(AM502223|pid:none) Leishmania infantum chromosome 5. 42 0.010
CP000394_1715(CP000394|pid:none) Granulibacter bethesdensis CGDN... 42 0.010
CP001013_572(CP001013|pid:none) Leptothrix cholodnii SP-6, compl... 42 0.010
(A8LKJ8) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 42 0.013
(Q6G0S2) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 42 0.017
(A4G8R1) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 42 0.017
(Q9KU53) RNA pyrophosphohydrolase (EC 3.6.1.-) ((Di)nucleoside p... 42 0.017
(Q21NW8) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 42 0.017
(Q6G4Y4) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 41 0.022
FP236842_2876(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 41 0.022
CP000738_2985(CP000738|pid:none) Sinorhizobium medicae WSM419, c... 41 0.022
(Q4FP40) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 41 0.022
CP000153_1646(CP000153|pid:none) Sulfurimonas denitrificans DSM ... 41 0.022
CP000699_3889(CP000699|pid:none) Sphingomonas wittichii RW1, com... 41 0.029
(A8GII0) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 41 0.029
(Q6LUM5) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 41 0.029
(Q9KK72) (Di)nucleoside polyphosphate hydrolase (EC 3.6.1.-) (Ap... 41 0.029
CP000449_2784(CP000449|pid:none) Maricaulis maris MCS10, complet... 40 0.037
(Q9A2W6) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 40 0.037
AP007255_301(AP007255|pid:none) Magnetospirillum magneticum AMB-... 40 0.037
(Q15P42) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 40 0.049
AM494942_9(AM494942|pid:none) Leishmania braziliensis chromosome... 40 0.049
CP001071_458(CP001071|pid:none) Akkermansia muciniphila ATCC BAA... 40 0.049
(A7ZQT6) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 40 0.049
CP000613_3336(CP000613|pid:none) Rhodospirillum centenum SW, com... 40 0.064
(B7LNI5) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 40 0.064
(A9N2M1) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 40 0.064
CU694389_26(CU694389|pid:none) Ralstonia solanacearum strain Mol... 40 0.064
(A1AX38) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 40 0.064
(A1KV92) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 39 0.084
CP000776_937(CP000776|pid:none) Campylobacter hominis ATCC BAA-3... 39 0.084
(Q2RV14) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 39 0.084
CP000411_606(CP000411|pid:none) Oenococcus oeni PSU-1, complete ... 39 0.084
EF148306_1(EF148306|pid:none) Populus trichocarpa x Populus delt... 39 0.11
AM236080_4690(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 39 0.11
CP001191_3846(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 39 0.11
CP000352_3087(CP000352|pid:none) Ralstonia metallidurans CH34, c... 39 0.11
A86695(A86695) hypothetical protein yffD [imported] - Lactococcu... 39 0.11
BT062288_1(BT062288|pid:none) Zea mays full-length cDNA clone ZM... 39 0.11
CP001068_3018(CP001068|pid:none) Ralstonia pickettii 12J chromos... 39 0.11
CP000774_1467(CP000774|pid:none) Parvibaculum lavamentivorans DS... 39 0.11
EU970998_1(EU970998|pid:none) Zea mays clone 355504 nudix hydrol... 39 0.11
CP001189_2948(CP001189|pid:none) Gluconacetobacter diazotrophicu... 39 0.11
BT034617_1(BT034617|pid:none) Zea mays full-length cDNA clone ZM... 39 0.11
(Q7N8U7) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 39 0.14
(Q92LA8) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 39 0.14
(Q7W482) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 39 0.14
CP000513_627(CP000513|pid:none) Dichelobacter nodosus VCS1703A, ... 39 0.14
AM902716_665(AM902716|pid:none) Bordetella petrii strain DSM 128... 39 0.14
(Q2J3I9) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 39 0.14
(A8HRT0) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 39 0.14
(Q94B74) RecName: Full=Nudix hydrolase 2; Short=AtNUDT2... 39 0.14
(Q3SH26) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 39 0.14
(A1JPE1) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 39 0.14
(Q7VTZ7) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 39 0.14
(A4TLC8) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 38 0.19
(A6WXT0) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 38 0.19
AC149079_1(AC149079|pid:none) Medicago truncatula clone mth2-75i... 38 0.19
AC153643_8(AC153643|pid:none) Medicago truncatula clone mth2-109... 38 0.19
(Q89X78) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 38 0.19
(Q9PHT5) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 38 0.24
(A1VYU1) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 38 0.24
CP000133_4021(CP000133|pid:none) Rhizobium etli CFN 42, complete... 38 0.24
(A1K975) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 38 0.24
(Q39JU4) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 37 0.32
(Q31XF7) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 37 0.32
AC155898_15(AC155898|pid:none) Medicago truncatula clone mth2-10... 37 0.32
(A7H3U9) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 37 0.32
(Q83BF8) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 37 0.32
(Q0ABK6) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 37 0.32
CP000628_3702(CP000628|pid:none) Agrobacterium radiobacter K84 c... 37 0.32
CP000468_2788(CP000468|pid:none) Escherichia coli APEC O1, compl... 37 0.41
(B0KP24) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 37 0.41
AM167904_2906(AM167904|pid:none) Bordetella avium 197N complete ... 37 0.41
(B2FJU2) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 37 0.54
(A5WAL1) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 37 0.54
(A1V0N7) Probable (di)nucleoside polyphosphate hydrolase (EC 3.6... 37 0.54
CP001052_3381(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 37 0.54
CP000822_4082(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 37 0.54
(Q2SZF7) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 37 0.54
(Q3K539) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 37 0.54
CP000270_3883(CP000270|pid:none) Burkholderia xenovorans LB400 c... 37 0.54
AP009385_431(AP009385|pid:none) Burkholderia multivorans ATCC 17... 36 0.71
(A3PMX6) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 36 0.71
(Q0AGN1) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 36 0.71
CP001074_4309(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 36 0.71
(Q493D9) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 36 0.71
CP001349_4548(CP001349|pid:none) Methylobacterium nodulans ORS 2... 36 0.92
CP001029_2207(CP001029|pid:none) Methylobacterium populi BJ001, ... 36 0.92
CP001503_474(CP001503|pid:none) Burkholderia glumae BGR1 chromos... 35 1.2
(Q5R053) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 35 1.2
AE004437_335(AE004437|pid:none) Halobacterium sp. NRC-1, complet... 35 1.6
(A4YKE4) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 35 1.6
CP000254_512(CP000254|pid:none) Methanospirillum hungatei JF-1, ... 35 1.6
CP001298_2431(CP001298|pid:none) Methylobacterium chloromethanic... 35 1.6
CP000499_213(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 35 1.6
(Q3BYA7) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 35 2.1
(Q8UBS8) RNA pyrophosphohydrolase (EC 3.6.1.-) ((Di)nucleoside p... 35 2.1
F97691(F97691)hypothetical protein AGR_C_5030 [imported] - Agrob... 35 2.1
(Q8PQ40) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 35 2.1
(A1B502) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 34 2.7
CP000934_464(CP000934|pid:none) Cellvibrio japonicus Ueda107, co... 34 2.7
AL732347_5(AL732347|pid:none) Oryza sativa genomic DNA, chromoso... 34 2.7
(Q2NYE5) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 34 2.7
AP008210_2335(AP008210|pid:none) Oryza sativa (japonica cultivar... 34 2.7
AL606651_20(AL606651|pid:none) Oryza sativa genomic DNA, chromos... 34 2.7
(A5VSH6) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 34 3.5
CP000792_1297(CP000792|pid:none) Campylobacter concisus 13826, c... 34 3.5
(Q2YLJ4) RNA pyrophosphohydrolase (EC 3.6.1.-) ((Di)nucleoside p... 34 3.5
(Q8YJ71) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 34 3.5
(A5E954) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 34 3.5
CR382138_620(CR382138|pid:none) Debaryomyces hansenii strain CBS... 34 3.5
CP001365_1384(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 33 4.6
CP000250_262(CP000250|pid:none) Rhodopseudomonas palustris HaA2,... 33 4.6
(A6Q441) RecName: Full=RNA pyrophosphohydrolase; EC=3.6... 33 4.6
AE017340_445(AE017340|pid:none) Idiomarina loihiensis L2TR, comp... 33 4.6
CP000908_2250(CP000908|pid:none) Methylobacterium extorquens PA1... 33 6.0
CP000264_382(CP000264|pid:none) Jannaschia sp. CCS1, complete ge... 33 6.0
CP000685_2594(CP000685|pid:none) Flavobacterium johnsoniae UW101... 33 7.8
AC011560_9(AC011560|pid:none) Arabidopsis thaliana chromosome 3 ... 33 7.8
CP000301_166(CP000301|pid:none) Rhodopseudomonas palustris BisB1... 33 7.8
DQ139261_77(DQ139261|pid:none) Vibro sp. DAT722 inDAT722 integro... 33 7.8
>(Q57045) RecName: Full=RNA pyrophosphohydrolase;
EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate
hydrolase; &E64101(E64101) &L42023_881(L42023|pid:none)
Length = 196
Score = 57.4 bits (137), Expect = 3e-07
Identities = 44/135 (32%), Positives = 57/135 (42%), Gaps = 4/135 (2%)
Frame = +1
Query: 37 YRSCVGALXFNQNNQVLICXXXXXXXTAVGKWQFPQGGVEVXXNXDYYVAXQXEIKEEVG 216
YR VG + N+ QVL WQFPQGG+ N A E+ EEVG
Sbjct: 7 YRPNVGIVICNRKGQVL-----WAKRCGQNSWQFPQGGIN--DNESAEQAMYRELHEEVG 59
Query: 217 LEPSIXTLKXVSK----LQXPLSYIYEDSPKSXSGGXIGQMKHWXLFYXPNDLIKTVNLN 384
L+P L VSK + P + DS IGQ + W L +D K +N+
Sbjct: 60 LQPKDVRLLYVSKHWLRYKLPKRLLRYDSKPM----CIGQKQRWFLLQLVSD-EKNINMQ 114
Query: 385 VEXEPEFEXCKWFGF 429
PEF+ +W F
Sbjct: 115 TTKSPEFDGWRWVSF 129
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 563,307,604
Number of extensions: 6977133
Number of successful extensions: 6499
Number of sequences better than 10.0: 213
Number of HSP's gapped: 6412
Number of HSP's successfully gapped: 213
Length of query: 199
Length of database: 1,040,966,779
Length adjustment: 122
Effective length of query: 77
Effective length of database: 650,044,009
Effective search space: 50053388693
Effective search space used: 50053388693
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
|
| PSORT |
|
| VS (DIR, S) |
1 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |