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Dicty_cDB
Contig List | Clone List | cDNA Library List
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U06978-1
Contig ID Contig-U06978-1
Contig update 2001. 8.30
Contig sequence 
>Contig-U06978-1 (Contig-U06978-1Q) /CSM_Contig/Contig-U06978-1Q.Seq.d
ATTTATTTNAAATTATAAAAGGTATTACATTCAATTGAAATTTTAATACT
CAATATATATATATTATATATGGCAGGAATATCATCAGCTAGATTATCAG
AAGAAAGAAAGAATTGGAGAAGAGATCATCCATATGGTTTCTTTGCAAGA
CCATCAACAAACACAGATGGATCATTAAATTTATATGTTTGGAATTGTGG
TATTCCTGGTAAAACAAAAACAAATTGGGAAGGTGGTGTATATCCACTTA
TTATGGAATTTACTGAAGATTATCCAAGTAAACCACCTAAATGTAGATTC
CCAAAAGATTTTTTCCACCCAAATGTTTACCCATCAGGTACTGTTTGTTT
AAGTATTTTAAATGAAGAAGCAGATTGGAAACCATCCGTAACAATTAAAA
CAGTTTTATTAGGTATTCAAGATTTATTAGATAACCCAAATCCAAAAAGT
CCTGCTCAACAACTTCCAATCCACTTATTTTTGACCAACAAGGAAGAATA
TGATAAAAAGGTCAAAGCACAATCAAAGGTATACCCACCACCACAATAAG
CTCGATAACAACTCTAAATATCAAATAAAACTAGGTCTTTTTTTCNTTTT
ATTTTAANCNAATTAAATCNAATCNAAAGGCNTTTTGNAAAAATTTACCC
ANATAANACNACNANANCAGNGTCAAAAAAAAAAAACAACATCCGNATAA
TAANNAATAAATT
Gap no gap
Contig length 713
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 686814
End point 686099
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 2
Link to clone list U06978
List of clone(s) 

est1=VSJ138F,1,597
est2=VSJ138Z,377,714
Translated Amino Acid sequence 
iyxkl*KVLHSIEILILNIYILYMAGISSARLSEERKNWRRDHPYGFFARPSTNTDGSLN
LYVWNCGIPGKTKTNWEGGVYPLIMEFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSIL
NEEADWKPSVTIKTVLLGIQDLLDNPNPKSPAQQLPIHLFLTNKEEYDKKVKAQSKVYPP
PQ*ar*ql*isnktrsffxfilxxlnxixrxfxkiypxxttxxxskkknniriixnk
Translated Amino Acid sequence (All Frames) 
Frame A:
iyxkl*KVLHSIEILILNIYILYMAGISSARLSEERKNWRRDHPYGFFARPSTNTDGSLN
LYVWNCGIPGKTKTNWEGGVYPLIMEFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSIL
NEEADWKPSVTIKTVLLGIQDLLDNPNPKSPAQQLPIHLFLTNKEEYDKKVKAQSKVYPP
PQ*ar*ql*isnktrsffxfilxxlnxixrxfxkiypxxttxxxskkknniriixnk


Frame B:
fixnykryyiqlkf*ysiyiyyiwqeyhqldyqkkerigeeiihmvslqdhqqtqmdh*i
ymfgivvflvkqkqigkvvyihllwnllkiiqvnhlnvdsqkifstqmfthqvlfv*vf*
mkkqignhp*qlkqfy*vfkiy*itqiqkvllnnfqstyf*ptrknmikrskhnqrythh
hnkldnnskyqiklglffxlf*xn*ixskgxlxkftxixxxxqxqkkkttsx**xin


Frame C:
lfxiikgitfn*nfntqyiyiiygrniis*iirrkkelekrssiwflcktinkhrwiikf
iclelwysw*nknklgrwcistyygiy*rlsk*tt*m*ipkrffppkclpiryclfkyfk
*rsrletirnn*nsfirysrfir*pkskkscsttsnplifdqqgri**kgqstikgiptt
tissittlnik*n*vffsfyfxxiksnxkafxknlpx*xxxxxvkkkkqhpxnxx*i
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U06978-1 (Contig-U06978-1Q)
/CSM_Contig/Contig-U06978-1Q.Seq.d
         (713 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U06978-1 (Contig-U06978-1Q) /CSM_Contig/Conti...  1023  0.0
Contig-U04643-1 (Contig-U04643-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U13162-1 (Contig-U13162-1Q) /CSM_Contig/Conti...    38  0.013
Contig-U08967-1 (Contig-U08967-1Q) /CSM_Contig/Conti...    36  0.050
Contig-U05480-1 (Contig-U05480-1Q) /CSM_Contig/Conti...    36  0.050
Contig-U04901-1 (Contig-U04901-1Q) /CSM_Contig/Conti...    36  0.050
Contig-U14699-1 (Contig-U14699-1Q) /CSM_Contig/Conti...    34  0.20
Contig-U13858-1 (Contig-U13858-1Q) /CSM_Contig/Conti...    34  0.20
Contig-U13331-1 (Contig-U13331-1Q) /CSM_Contig/Conti...    34  0.20
Contig-U11545-1 (Contig-U11545-1Q) /CSM_Contig/Conti...    34  0.20

>Contig-U06978-1 (Contig-U06978-1Q) /CSM_Contig/Contig-U06978-1Q.Seq.d
          Length = 713

 Score = 1023 bits (516), Expect = 0.0
 Identities = 516/516 (100%)
 Strand = Plus / Plus

                                                                       
Query: 72  ggcaggaatatcatcagctagattatcagaagaaagaaagaattggagaagagatcatcc 131
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  ggcaggaatatcatcagctagattatcagaagaaagaaagaattggagaagagatcatcc 131

                                                                       
Query: 132 atatggtttctttgcaagaccatcaacaaacacagatggatcattaaatttatatgtttg 191
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 atatggtttctttgcaagaccatcaacaaacacagatggatcattaaatttatatgtttg 191

                                                                       
Query: 192 gaattgtggtattcctggtaaaacaaaaacaaattgggaaggtggtgtatatccacttat 251
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gaattgtggtattcctggtaaaacaaaaacaaattgggaaggtggtgtatatccacttat 251

                                                                       
Query: 252 tatggaatttactgaagattatccaagtaaaccacctaaatgtagattcccaaaagattt 311
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tatggaatttactgaagattatccaagtaaaccacctaaatgtagattcccaaaagattt 311

                                                                       
Query: 312 tttccacccaaatgtttacccatcaggtactgtttgtttaagtattttaaatgaagaagc 371
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tttccacccaaatgtttacccatcaggtactgtttgtttaagtattttaaatgaagaagc 371

                                                                       
Query: 372 agattggaaaccatccgtaacaattaaaacagttttattaggtattcaagatttattaga 431
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agattggaaaccatccgtaacaattaaaacagttttattaggtattcaagatttattaga 431

                                                                       
Query: 432 taacccaaatccaaaaagtcctgctcaacaacttccaatccacttatttttgaccaacaa 491
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 taacccaaatccaaaaagtcctgctcaacaacttccaatccacttatttttgaccaacaa 491

                                                                       
Query: 492 ggaagaatatgataaaaaggtcaaagcacaatcaaaggtatacccaccaccacaataagc 551
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ggaagaatatgataaaaaggtcaaagcacaatcaaaggtatacccaccaccacaataagc 551

                                               
Query: 552 tcgataacaactctaaatatcaaataaaactaggtc 587
           ||||||||||||||||||||||||||||||||||||
Sbjct: 552 tcgataacaactctaaatatcaaataaaactaggtc 587


 Score = 97.6 bits (49), Expect = 2e-20
 Identities = 52/52 (100%)
 Strand = Plus / Plus

                                                              
Query: 1  atttatttnaaattataaaaggtattacattcaattgaaattttaatactca 52
          ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atttatttnaaattataaaaggtattacattcaattgaaattttaatactca 52


 Score = 61.9 bits (31), Expect = 9e-10
 Identities = 46/46 (100%)
 Strand = Plus / Plus

                                                         
Query: 611 aattaaatcnaatcnaaaggcnttttgnaaaaatttacccanataa 656
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 aattaaatcnaatcnaaaggcnttttgnaaaaatttacccanataa 656


>Contig-U04643-1 (Contig-U04643-1Q) /CSM_Contig/Contig-U04643-1Q.Seq.d
          Length = 536

 Score = 40.1 bits (20), Expect = 0.003
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 23  tattacattcaattgaaatt 42
           ||||||||||||||||||||
Sbjct: 249 tattacattcaattgaaatt 268


>Contig-U13162-1 (Contig-U13162-1Q) /CSM_Contig/Contig-U13162-1Q.Seq.d
          Length = 1139

 Score = 38.2 bits (19), Expect = 0.013
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 175 ttaaatttatatgtttggaattg 197
           ||||||||| |||||||||||||
Sbjct: 520 ttaaatttagatgtttggaattg 542


 Score = 30.2 bits (15), Expect = 3.1
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 14  tataaaaggtattac 28
           |||||||||||||||
Sbjct: 892 tataaaaggtattac 906


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8332
Number of Sequences: 6905
Number of extensions: 8332
Number of successful extensions: 1013
Number of sequences better than 10.0: 107
length of query: 713
length of database: 5,674,871
effective HSP length: 16
effective length of query: 697
effective length of database: 5,564,391
effective search space: 3878380527
effective search space used: 3878380527
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.11
Homology vs DNA 
Query= Contig-U06978-1 (Contig-U06978-1Q) /CSM_Contig/Contig-U06978-1Q.Seq.d
         (713 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU269465) Dictyostelium discoideum vegetative cDNA clone:VS...  1023   0.0    2
(AF246690) Dictyostelium discoideum putative E2 enzyme Ubc9 ...   367   0.0    6
(AU269466) Dictyostelium discoideum vegetative cDNA clone:VS...   262   1e-82  2
(AM638489) Entamoeba dispar GSS, clone dispar52g01.p1k.            60   4e-16  3
(AZ688664) ENTKG60TF Entamoeba histolytica Sheared DNA Entam...    68   1e-15  2
(BB976444) Plasmodium berghei strain ANKA cDNA clone:OK00633...    76   6e-14  2
(EH013053) USDA-FP_185891 Lysiphlebus testaceipes adult whol...    48   4e-13  5
(EH705298) CCIS4157.b1_J08.ab1 CCI(LMS) chicory Cichorium in...    66   8e-13  2
(EH692993) CCIM5054.b1_K15.ab1 CCI(LMS) chicory Cichorium in...    66   8e-13  2
(EH701468) CCIS13558.b1_L05.ab1 CCI(LMS) chicory Cichorium i...    66   8e-13  2
(EH694359) CCIM6301.b1_J15.ab1 CCI(LMS) chicory Cichorium in...    66   8e-13  2
(EH710313) CCIS9619.b1_E05.ab1 CCI(LMS) chicory Cichorium in...    66   8e-13  2
(EH701709) CCIS13777.b1_B14.ab1 CCI(LMS) chicory Cichorium i...    66   8e-13  2
(EH698663) CCIS10879.b1_N07.ab1 CCI(LMS) chicory Cichorium i...    66   8e-13  2
(EB696097) NecGex_306D03 Ornamental tobacco (LxS8) post-fert...    56   1e-12  3
(DW000495) KL4B.105P21F.051104T7 KL4B Nicotiana tabacum cDNA...    62   5e-12  3
(BP745424) Nicotiana sylvestris mRNA, expressed in leaf, clo...    62   5e-12  3
(DT213645) E017_B06 Embryogenic SSH library Cichorium intybu...    66   5e-11  2
(EL370971) CCES7990.b1_L06.ab1 CCE(LMS) endive Cichorium end...    58   2e-10  2
(EH703844) CCIS2723.b1_E09.ab1 CCI(LMS) chicory Cichorium in...    58   2e-10  2
(EL361988) CCEM6567.b1_M09.ab1 CCE(LMS) endive Cichorium end...    58   2e-10  2
(EL355867) CCEM1245.b1_I23.ab1 CCE(LMS) endive Cichorium end...    58   2e-10  2
(EH702189) CCIS14214.b1_K01.ab1 CCI(LMS) chicory Cichorium i...    78   5e-10  1
(EB445608) KR2B.108M02F.051229T7 KR2B Nicotiana tabacum cDNA...    54   1e-09  3
(BP136923) Nicotiana tabacum cDNA, clone: BY9560, primer: M1...    54   1e-09  3
(EB696698) NecGex_317E04 Ornamental tobacco (LxS8) post-fert...    54   1e-09  3
(DC203195) Plasmodium berghei strain ANKA cDNA clone:MG00234...    76   2e-09  1
(DW079131) CLPX1509.b1_J18.ab1 CLP(XYZ) lettuce perennis Lac...    74   8e-09  1
(DW078012) CLPX1403.b1_E16.ab1 CLP(XYZ) lettuce perennis Lac...    74   8e-09  1
(CF437810) EST674155 normalized cDNA library of onion Allium...    64   1e-08  2
(BW686265) Solanum lycopersicum cDNA, clone: FC05CB04, 5' en...    48   1e-08  3
(DB694541) Solanum lycopersicum cDNA, clone: LEFL1051DB01, 5...    48   1e-08  3
(AK246268) Solanum lycopersicum cDNA, clone: FC05CB04, HTC i...    48   1e-08  3
(DB701353) Solanum lycopersicum cDNA, clone: LEFL1073BH02, 5...    48   1e-08  3
(EL363944) CCEM8434.b1_D22.ab1 CCE(LMS) endive Cichorium end...    50   4e-08  2
(AM647227) Entamoeba moshkovskii FIC GSS, clone mosh047g09.p1k.    50   5e-08  3
(DN298537) PL04013A1F08 cDNA from sexually mature hermaphodi...    40   5e-08  3
(DN297416) PL04009A2D06 cDNA from sexually mature hermaphodi...    40   1e-07  3
(DN307029) PL05012B2F05 cDNA from sexually mature hermaphodi...    40   1e-07  3
(DN299648) PL04016B2A01 cDNA from sexually mature hermaphodi...    40   1e-07  3
(AY817507) Schistosoma mansoni Ubc9 gene, partial cds.             70   1e-07  1
(AY817506) Schistosoma mansoni Ubc9 mRNA, partial cds.             70   1e-07  1
(AI977464) EST272058 Schistosoma mansoni male, Phil LoVerde/...    70   1e-07  1
(CD082172) MA3-9999U-M331-C01-U.B MA3-0001 Schistosoma manso...    70   1e-07  1
(CD081070) MA3-9999U-M318-B01-U.B MA3-0001 Schistosoma manso...    70   1e-07  1
(CD075788) MA3-0001U-M331-C01-U.G MA3-0001 Schistosoma manso...    70   1e-07  1
(CD074892) MA3-0001U-M318-B01-U.B MA3-0001 Schistosoma manso...    70   1e-07  1
(AI395082) MA002361.C8F Soares normalized S8W Schistosoma ma...    70   1e-07  1
(AI394976) MA001965.C8F Soares normalized S8W Schistosoma ma...    70   1e-07  1
(EX716088) SB_AW219351a07.esd.z AW2 Schistosoma mansoni cDNA...    70   1e-07  1
(EX714209) SB_AW216631b05.esd.y AW2 Schistosoma mansoni cDNA...    70   1e-07  1
(EX708777) GF_AW200151g06.esd.z AW2 Schistosoma mansoni cDNA...    70   1e-07  1
(EX708546) FS_AW203451g07.esd.z AW2 Schistosoma mansoni cDNA...    70   1e-07  1
(AY066122) Schmidtea mediterranea clone H.113.10h unknown mR...    40   1e-07  3
(DN295911) PL04002X1C01 cDNA from sexually mature hermaphodi...    40   1e-07  3
(BU010187) QGJ12L05.yg.ab1 QG_EFGHJ lettuce serriola Lactuca...    66   3e-07  2
(BU012603) QGJ2G01.yg.ab1 QG_EFGHJ lettuce serriola Lactuca ...    66   3e-07  2
(BU014884) QGJ8K18.yg.ab1 QG_EFGHJ lettuce serriola Lactuca ...    66   4e-07  2
(BU005580) QGG8I13.yg.ab1 QG_EFGHJ lettuce serriola Lactuca ...    66   4e-07  2
(BQ990904) QGF21G19.yg.ab1 QG_EFGHJ lettuce serriola Lactuca...    66   4e-07  2
(CJ993168) Saccharomyces pastorianus mRNA, clone: B001-38, 5...    40   4e-07  3
(BQ987825) QGF13E14.yg.ab1 QG_EFGHJ lettuce serriola Lactuca...    66   4e-07  2
(DW126595) CLSX3136.b1_O15.ab1 CLS(XYZ) lettuce sativa Lactu...    66   4e-07  2
(BU013787) QGJ5J15.yg.ab1 QG_EFGHJ lettuce serriola Lactuca ...    66   4e-07  2
(BQ990520) QGF20G09.yg.ab1 QG_EFGHJ lettuce serriola Lactuca...    66   4e-07  2
(BQ999130) QGG21D09.yg.ab1 QG_EFGHJ lettuce serriola Lactuca...    66   4e-07  2
(BQ992360) QGF25G17.yg.ab1 QG_EFGHJ lettuce serriola Lactuca...    66   5e-07  2
(BU013412) QGJ4J08.yg.ab1 QG_EFGHJ lettuce serriola Lactuca ...    66   5e-07  2
(DW131979) CLSX8632.b1_P21.ab1 CLS(XYZ) lettuce sativa Lactu...    66   5e-07  2
(BQ986103) QGE8J06.yg.ab1 QG_EFGHJ lettuce serriola Lactuca ...    66   5e-07  2
(DW118374) CLRY7021.b1_J03.ab1 CLR(XYZ) lettuce serriola Lac...    66   5e-07  2
(DV980441) GQ018M08.T24_F02 GQ018: Clean ROOTS systems - N t...    54   5e-07  3
(DW114604) CLRY2724.b1_G09.ab1 CLR(XYZ) lettuce serriola Lac...    66   5e-07  2
(DW106600) CLRX4315.b1_E23.ab1 CLR(XYZ) lettuce serriola Lac...    66   5e-07  2
(DY966031) CLSM17230.b1_L12.ab1 CLS(LMS) lettuce sativa Lact...    66   5e-07  2
(DV978553) GQ0131.B3_N18 GQ013: Elongating ROOTS tips - sapl...    54   5e-07  3
(DW073870) CLLZ5562.b1_D23.ab1 CLL(XYZ) lettuce saligna Lact...    52   6e-07  2
(DW067524) CLLY7313.b1_A05.ab1 CLL(XYZ) lettuce saligna Lact...    52   6e-07  2
(DW068221) CLLY7984.b1_P04.ab1 CLL(XYZ) lettuce saligna Lact...    52   6e-07  2
(EH739772) CNMS13108.b1_G13.ab1 CNM(LMS) spotted knapweed Ce...    48   6e-07  2
(EH727338) CNMM13775.b1_N12.ab1 CNM(LMS) spotted knapweed Ce...    48   6e-07  2
(EH743270) CNMS2955.b1_E20.ab1 CNM(LMS) spotted knapweed Cen...    48   6e-07  2
(EH741671) CNMS15885.b1_J11.ab1 CNM(LMS) spotted knapweed Ce...    48   6e-07  2
(FF146737) Sm4H4 Cell cultures of Saussurea medusa Saussurea...    48   6e-07  2
(BQ991251) QGF22F20.yg.ab1 QG_EFGHJ lettuce serriola Lactuca...    52   6e-07  2
(EX237952) PY02043X1H05.f1 PY02 Carica papaya cDNA, mRNA seq...    58   6e-07  2
(EX243467) PY03078X1G08.f1 PY03 Carica papaya cDNA, mRNA seq...    58   6e-07  2
(EX236855) PY02020X1D09.f1 PY02 Carica papaya cDNA, mRNA seq...    58   6e-07  2
(EX238658) PY02037X1G04.f1 PY02 Carica papaya cDNA, mRNA seq...    58   6e-07  2
(EX236645) PY02011X1H03.f1 PY02 Carica papaya cDNA, mRNA seq...    58   6e-07  2
(EX236705) PY02016X1B08.f1 PY02 Carica papaya cDNA, mRNA seq...    58   6e-07  2
(EX237808) PY02052X1B06.f1 PY02 Carica papaya cDNA, mRNA seq...    58   6e-07  2
(EX237136) PY02010X1F10.f1 PY02 Carica papaya cDNA, mRNA seq...    58   6e-07  2
(EX238271) PY02038X1H03.f1 PY02 Carica papaya cDNA, mRNA seq...    58   6e-07  2
(EX236760) PY02017X1F09.f1 PY02 Carica papaya cDNA, mRNA seq...    58   6e-07  2
(CO480075) GQ018M08.T24.1_F02 GQ018: Clean ROOTS systems - N...    54   9e-07  3
(EX413537) GQ03616.B7_E10 GQ036 - Shoot tip - Active growth ...    54   9e-07  3
(DV985998) GQ0206.B3_K24 GQ020: Clean ROOTS systems -Diurnal...    54   1e-06  3
(DV996415) GQ02792.B3_C03 GQ099: Mixed spruce tissues Picea ...    54   1e-06  3
(DV987310) GQ0206.TB_K24 GQ020: Clean ROOTS systems -Diurnal...    54   1e-06  3

>(AU269465) Dictyostelium discoideum vegetative cDNA clone:VSJ138,
           5' end single read.
          Length = 597

 Score = 1023 bits (516), Expect(2) = 0.0
 Identities = 516/516 (100%)
 Strand = Plus / Plus


Query: 72  ggcaggaatatcatcagctagattatcagaagaaagaaagaattggagaagagatcatcc 131
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72  ggcaggaatatcatcagctagattatcagaagaaagaaagaattggagaagagatcatcc 131


Query: 132 atatggtttctttgcaagaccatcaacaaacacagatggatcattaaatttatatgtttg 191
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 atatggtttctttgcaagaccatcaacaaacacagatggatcattaaatttatatgtttg 191


Query: 192 gaattgtggtattcctggtaaaacaaaaacaaattgggaaggtggtgtatatccacttat 251
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gaattgtggtattcctggtaaaacaaaaacaaattgggaaggtggtgtatatccacttat 251


Query: 252 tatggaatttactgaagattatccaagtaaaccacctaaatgtagattcccaaaagattt 311
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tatggaatttactgaagattatccaagtaaaccacctaaatgtagattcccaaaagattt 311


Query: 312 tttccacccaaatgtttacccatcaggtactgtttgtttaagtattttaaatgaagaagc 371
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tttccacccaaatgtttacccatcaggtactgtttgtttaagtattttaaatgaagaagc 371


Query: 372 agattggaaaccatccgtaacaattaaaacagttttattaggtattcaagatttattaga 431
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agattggaaaccatccgtaacaattaaaacagttttattaggtattcaagatttattaga 431


Query: 432 taacccaaatccaaaaagtcctgctcaacaacttccaatccacttatttttgaccaacaa 491
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 taacccaaatccaaaaagtcctgctcaacaacttccaatccacttatttttgaccaacaa 491


Query: 492 ggaagaatatgataaaaaggtcaaagcacaatcaaaggtatacccaccaccacaataagc 551
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ggaagaatatgataaaaaggtcaaagcacaatcaaaggtatacccaccaccacaataagc 551


Query: 552 tcgataacaactctaaatatcaaataaaactaggtc 587
           ||||||||||||||||||||||||||||||||||||
Sbjct: 552 tcgataacaactctaaatatcaaataaaactaggtc 587

 Score = 97.6 bits (49), Expect(2) = 0.0
 Identities = 52/52 (100%)
 Strand = Plus / Plus


Query: 1  atttatttnaaattataaaaggtattacattcaattgaaattttaatactca 52
          ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  atttatttnaaattataaaaggtattacattcaattgaaattttaatactca 52

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 830,196,181
Number of extensions: 55603897
Number of successful extensions: 7487145
Number of sequences better than 10.0: 1304
Length of query: 713
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 689
Effective length of database: 97,308,875,965
Effective search space: 67045815539885
Effective search space used: 67045815539885
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 6.23
Homology vs Protein 
Query= Contig-U06978-1 (Contig-U06978-1Q) /CSM_Contig/Contig-U06978-1Q.Seq.d
         (713 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ580839_1(AJ580839|pid:none) Nicotiana benthamiana mRNA for SUM...   231   2e-59
EF084113_1(EF084113|pid:none) Picea sitchensis clone WS0273_F01 ...   230   3e-59
AF091106_1(AF091106|pid:none) Arabidopsis thaliana E2 ubiquitin-...   229   6e-59
EF083895_1(EF083895|pid:none) Picea sitchensis clone WS0291_D16 ...   229   6e-59
EU284954_1(EU284954|pid:none) TSA: Elaeis guineensis EgEfMPOB001...   227   3e-58
AC098695_11(AC098695|pid:none) Oryza sativa (japonica cultivar-g...   227   3e-58
AM448784_1(AM448784|pid:none) Vitis vinifera contig VV78X077229....   226   5e-58
DQ788622_1(DQ788622|pid:none) Triticum turgidum subsp. durum put...   226   7e-58
EU962124_1(EU962124|pid:none) Zea mays clone 240421 ubiquitin-co...   223   3e-57
CP001332_113(CP001332|pid:none) Micromonas sp. RCC299 chromosome...   223   6e-57
EU952667_1(EU952667|pid:none) Zea mays clone 1285993 ubiquitin-c...   222   1e-56
EF147621_1(EF147621|pid:none) Populus trichocarpa clone WS0123_O...   221   2e-56
EF146753_1(EF146753|pid:none) Populus trichocarpa clone WS01213_...   220   3e-56
AX250463_1(AX250463|pid:none) Sequence 69 from Patent WO0168863.      217   2e-55
(P50623) RecName: Full=SUMO-conjugating enzyme UBC9;          EC...   216   5e-55
CU928174_519(CU928174|pid:none) Zygosaccharomyces rouxii strain ...   214   2e-54
FN392320_763(FN392320|pid:none) Pichia pastoris GS115 chromosome...   214   2e-54
(P40984) RecName: Full=SUMO-conjugating enzyme ubc9;          EC...   213   5e-54
FJ265877_1(FJ265877|pid:none) Scylla serrata ubiquitin-conjugati...   212   8e-54
CR380950_30(CR380950|pid:none) Candida glabrata strain CBS138 ch...   211   1e-53
EU971073_1(EU971073|pid:none) Zea mays clone 356956 unknown mRNA.     209   9e-53
FN315596_1(FN315596|pid:none) Schistosoma japonicum isolate Anhu...   208   1e-52
FN359260_2(FN359260|pid:none) Schistosoma mansoni genome sequenc...   208   1e-52
CP000501_179(CP000501|pid:none) Pichia stipitis CBS 6054 chromos...   207   2e-52
AM910989_124(AM910989|pid:none) Plasmodium knowlesi strain H chr...   207   3e-52
AB113652_1(AB113652|pid:none) Coprinopsis cinerea ubc9 mRNA for ...   206   6e-52
CR382133_476(CR382133|pid:none) Debaryomyces hansenii strain CBS...   206   6e-52
AE016818_402(AE016818|pid:none) Ashbya gossypii (= Eremothecium ...   206   7e-52
FJ195328_1(FJ195328|pid:none) Larimichthys crocea ubiquitin-conj...   206   7e-52
CR382128_908(CR382128|pid:none) Yarrowia lipolytica strain CLIB1...   206   7e-52
CR940352_518(CR940352|pid:none) Theileria annulata strain Ankara...   205   1e-51
BC051289_1(BC051289|pid:none) Homo sapiens ubiquitin-conjugating...   204   2e-51
BT074509_1(BT074509|pid:none) Osmerus mordax clone omor-eva-514-...   204   2e-51
BT081945_1(BT081945|pid:none) Rana catesbeiana clone rcat-evr-51...   204   2e-51
AY892276_1(AY892276|pid:none) Synthetic construct Homo sapiens c...   204   2e-51
(Q9DDJ0) RecName: Full=SUMO-conjugating enzyme UBC9-B;          ...   204   2e-51
BT045709_1(BT045709|pid:none) Salmo salar clone ssal-rgf-529-080...   204   2e-51
BT057036_1(BT057036|pid:none) Salmo salar clone ssal-evf-557-345...   204   2e-51
(Q9W6H5) RecName: Full=SUMO-conjugating enzyme UBC9-A;          ...   204   3e-51
CR954209_51(CR954209|pid:none) Ostreococcus tauri strain OTTH059...   203   4e-51
BT049197_1(BT049197|pid:none) Salmo salar clone ssal-rgb-544-191...   203   5e-51
BT048191_1(BT048191|pid:none) Salmo salar clone ssal-eve-535-061...   202   6e-51
BT046761_1(BT046761|pid:none) Salmo salar clone ssal-sjb-007-367...   202   6e-51
DQ214736_1(DQ214736|pid:none) Taeniopygia guttata clone 0058P001...   202   8e-51
BT058654_1(BT058654|pid:none) Salmo salar clone Contig2961 SUMO-...   202   1e-50
EU966933_1(EU966933|pid:none) Zea mays clone 298244 unknown mRNA.     201   1e-50
CP001324_146(CP001324|pid:none) Micromonas sp. RCC299 chromosome...   199   5e-50
AP007157_802(AP007157|pid:none) Aspergillus oryzae RIB40 genomic...   199   7e-50
FM992695_754(FM992695|pid:none) Candida dubliniensis CD36 chromo...   199   9e-50
BT077184_1(BT077184|pid:none) Caligus rogercresseyi clone crog-e...   197   3e-49
(Q6Y1Z4) RecName: Full=SUMO-conjugating enzyme UBC9;          EC...   195   1e-48
CU640366_1044(CU640366|pid:none) Podospora anserina genomic DNA ...   195   1e-48
EU971674_1(EU971674|pid:none) Zea mays clone 369059 ubiquitin-co...   194   3e-48
AM270070_2(AM270070|pid:none) Aspergillus niger contig An04c0090...   193   4e-48
AF008910_1(AF008910|pid:none) Prunus armeniaca ubiquitin-conjuga...   189   5e-47
BT075592_1(BT075592|pid:none) Osmerus mordax clone omor-eva-503-...   186   5e-46
AY889814_1(AY889814|pid:none) Synthetic construct Homo sapiens c...   185   1e-45
AL031714_2(AL031714|pid:none) Human DNA sequence from clone LA16...   185   1e-45
AC008031_6(AC008031|pid:none) Trypanosoma brucei chromosome 2 cl...   171   2e-41
AM055943_115(AM055943|pid:none) Toxoplasma gondii RH, genomic DN...   171   2e-41
CP000078_40(CP000078|pid:none) Leishmania major strain Friedlin ...   153   4e-36
AM502220_31(AM502220|pid:none) Leishmania infantum chromosome 2.      153   4e-36
AK223064_1(AK223064|pid:none) Homo sapiens mRNA for ubiquitin-co...   125   2e-27
BT082432_1(BT082432|pid:none) Anoplopoma fimbria clone afim-evh-...   124   2e-27
(P49459) RecName: Full=Ubiquitin-conjugating enzyme E2 A;       ...   124   2e-27
BT073899_1(BT073899|pid:none) Oncorhynchus mykiss clone omyk-evo...   124   3e-27
BT074286_1(BT074286|pid:none) Oncorhynchus mykiss clone omyk-evo...   124   4e-27
EU284823_1(EU284823|pid:none) TSA: Elaeis guineensis EgEfMPOB000...   124   4e-27
AK070524_1(AK070524|pid:none) Oryza sativa Japonica Group cDNA c...   123   5e-27
AB079798_1(AB079798|pid:none) Oryza sativa Japonica Group OsRad6...   123   6e-27
AK112003_1(AK112003|pid:none) Oryza sativa Japonica Group cDNA c...   123   6e-27
BT036396_1(BT036396|pid:none) Zea mays full-length cDNA clone ZM...   122   8e-27
EU964992_1(EU964992|pid:none) Zea mays clone 283008 ubiquitin-co...   122   1e-26
AF262934_1(AF262934|pid:none) Avicennia marina ubiquitin conjuga...   122   1e-26
AY891220_1(AY891220|pid:none) Synthetic construct Homo sapiens c...   122   1e-26
BT063816_1(BT063816|pid:none) Zea mays full-length cDNA clone ZM...   122   1e-26
CR761899_1(CR761899|pid:none) Xenopus tropicalis finished cDNA, ...   122   1e-26
(P63146) RecName: Full=Ubiquitin-conjugating enzyme E2 B;       ...   122   1e-26
EU964354_1(EU964354|pid:none) Zea mays clone 278181 ubiquitin-co...   122   1e-26
BT079170_1(BT079170|pid:none) Esox lucius clone eluc-evq-509-269...   122   1e-26
AJ843121_1(AJ843121|pid:none) Plantago major mRNA for Ubiquitin-...   120   3e-26
DQ200366_1(DQ200366|pid:none) Solanum tuberosum clone 055E08 ubi...   120   3e-26
AY223038_1(AY223038|pid:none) Schistosoma japonicum SJCHGC01675 ...   120   3e-26
AB026055_1(AB026055|pid:none) Nicotiana tabacum Ntubc1 mRNA for ...   120   4e-26
DQ294271_1(DQ294271|pid:none) Solanum tuberosum clone 147C03 ubi...   120   4e-26
BT077888_1(BT077888|pid:none) Lepeophtheirus salmonis clone lsal...   120   5e-26
DQ321735_1(DQ321735|pid:none) Schistosoma mansoni RAD6 mRNA, com...   119   7e-26
FN357687_9(FN357687|pid:none) Schistosoma mansoni genome sequenc...   119   7e-26
AY048267_1(AY048267|pid:none) Arabidopsis thaliana AT5g62540/K19...   119   9e-26
BT034341_1(BT034341|pid:none) Zea mays full-length cDNA clone ZM...   119   9e-26
(P42746) RecName: Full=Ubiquitin-conjugating enzyme E2 3;       ...   119   1e-25
AY632078_1(AY632078|pid:none) Clonorchis sinensis ubiquitin-conj...   118   2e-25
BT078888_1(BT078888|pid:none) Esox lucius clone eluc-evq-513-210...   118   2e-25
EF144613_1(EF144613|pid:none) Populus trichocarpa clone WS01111_...   117   3e-25
AK301675_1(AK301675|pid:none) Homo sapiens cDNA FLJ51703 complet...   117   5e-25
NRL(1AAK) Ubiquitin conjugating enzyme (EC 6.3.2.19) - Arabidopsis    117   5e-25
(P25865) RecName: Full=Ubiquitin-conjugating enzyme E2 1;       ...   117   5e-25
(P52478) RecName: Full=Ubiquitin-conjugating enzyme E2 1;       ...   117   5e-25
CP001323_325(CP001323|pid:none) Micromonas sp. RCC299 chromosome...   116   6e-25
BT076412_1(BT076412|pid:none) Caligus rogercresseyi clone crog-e...   115   1e-24
EF585864_1(EF585864|pid:none) Sonneratia alba isolate Sonn402_1 ...   115   1e-24
AK163966_1(AK163966|pid:none) Mus musculus ES cells cDNA, RIKEN ...   115   1e-24
EU586199_1(EU586199|pid:none) Malus x domestica cultivar Fuji ub...   114   3e-24
AY389584_1(AY389584|pid:none) Hyacinthus orientalis ubiquitin-co...   114   3e-24
(Q6FR76) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   114   4e-24
EF585865_1(EF585865|pid:none) Sonneratia caseolaris isolate Sonn...   114   4e-24
EF585866_1(EF585866|pid:none) Sonneratia ovata isolate Sonn402_3...   112   9e-24
BT073663_1(BT073663|pid:none) Oncorhynchus mykiss clone omyk-evn...   112   9e-24
CU928175_205(CU928175|pid:none) Zygosaccharomyces rouxii strain ...   112   1e-23
AC122726_25(AC122726|pid:none) Medicago truncatula clone mth2-23...   111   2e-23
AF132074_1(AF132074|pid:none) Equus caballus RAD6 homolog (EHR6A...   110   3e-23
AF132075_1(AF132075|pid:none) Bos taurus RAD6 homolog (BHR6A) ge...   110   3e-23
BT046508_1(BT046508|pid:none) Salmo salar clone ssal-eve-561-269...   110   6e-23
(Q4PFA5) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   108   1e-22
AF419316_1(AF419316|pid:none) Bos taurus RAD6-like protein HR6A ...   108   1e-22
D78372_1(D78372|pid:none) Neurospora crassa DNA for mus-8, compl...   108   1e-22
CP001331_21(CP001331|pid:none) Micromonas sp. RCC299 chromosome ...   108   1e-22
CU928180_286(CU928180|pid:none) Kluyveromyces thermotolerans str...   108   2e-22
AF132073_1(AF132073|pid:none) Sus scrofa RAD6 homolog (PHR6A) ge...   108   2e-22
(Q58FS2) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   108   2e-22
CU638744_485(CU638744|pid:none) Podospora anserina genomic DNA c...   108   2e-22
(Q6C093) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   107   3e-22
AL513444_21(AL513444|pid:none) Neurospora crassa DNA linkage gro...   107   4e-22
FM992695_813(FM992695|pid:none) Candida dubliniensis CD36 chromo...   107   5e-22
(Q4WLA7) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   106   6e-22
(Q96UP5) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   106   6e-22
FN373925_1(FN373925|pid:none) Schistosoma mansoni genome sequenc...   106   8e-22
(Q6BU36) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   106   8e-22
CP000500_524(CP000500|pid:none) Pichia stipitis CBS 6054 chromos...   105   1e-21
CR380959_331(CR380959|pid:none) Candida glabrata strain CBS138 c...   105   1e-21
(P52493) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   105   1e-21
AY814405_1(AY814405|pid:none) Schistosoma japonicum SJCHGC06418 ...   105   2e-21
FN392321_367(FN392321|pid:none) Pichia pastoris GS115 chromosome...   104   2e-21
EU593895_1(EU593895|pid:none) Brassica napus E2 ubiquitin-conjug...   103   4e-21
(O00102) RecName: Full=Ubiquitin-conjugating enzyme E2-18 kDa;  ...   103   5e-21
D85544_1(D85544|pid:none) Schizosaccharomyces pombe mRNA for Ubc...   103   5e-21
DQ144986_1(DQ144986|pid:none) Symbiodinium sp. C3 ubiquitin conj...   103   5e-21
(P35133) RecName: Full=Ubiquitin-conjugating enzyme E2 10;      ...   103   7e-21
CP000497_479(CP000497|pid:none) Pichia stipitis CBS 6054 chromos...   102   9e-21
AF325019_1(AF325019|pid:none) Arabidopsis thaliana AT4g27960 (AT...   102   1e-20
DQ027023_1(DQ027023|pid:none) Arabidopsis thaliana ubiquitinatin...   102   1e-20
(P35132) RecName: Full=SUMO-conjugating enzyme UBC9;          EC...   102   1e-20
(Q553F3) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...   102   2e-20
EF585867_1(EF585867|pid:none) Sonneratia apetala isolate Sonn402...   102   2e-20
AC148404_22(AC148404|pid:none) Medicago truncatula clone mth2-28...   102   2e-20
(Q94F47) RecName: Full=Ubiquitin carrier protein E2 28;         ...   101   2e-20
(P35135) RecName: Full=Ubiquitin-conjugating enzyme E2-17 kDa;  ...   101   2e-20
AY489135_1(AY489135|pid:none) Capsicum annuum ubiquitin-conjugat...   101   3e-20
DQ228113_4(DQ228113|pid:none) Hanusia phi strain CCMP325 18S rib...   101   3e-20
EU586200_1(EU586200|pid:none) Malus x domestica cultivar Fuji ub...   101   3e-20
DQ207855_1(DQ207855|pid:none) Solanum tuberosum clone 078A09 ubi...   100   3e-20
GM966533_1(GM966533|pid:none) Sequence 1865 from Patent WO200814...   100   3e-20
BT034602_1(BT034602|pid:none) Zea mays full-length cDNA clone ZM...   100   3e-20
EF085158_1(EF085158|pid:none) Picea sitchensis clone WS0285_M23 ...   100   3e-20
AM427228_1(AM427228|pid:none) Vitis vinifera contig VV78X183533....   100   4e-20
EF147515_1(EF147515|pid:none) Populus trichocarpa clone WS0123_B...   100   4e-20
EF066642_1(EF066642|pid:none) Trichinella spiralis clone T3125 u...   100   4e-20
AK059627_1(AK059627|pid:none) Oryza sativa Japonica Group cDNA c...   100   4e-20
(Q9FKT3) RecName: Full=Ubiquitin carrier protein E2 30;         ...   100   4e-20
EU586201_1(EU586201|pid:none) Malus x domestica cultivar Fuji ub...   100   4e-20
(Q02159) RecName: Full=Ubiquitin-conjugating enzyme E2-18 kDa;  ...   100   4e-20
AM502240_59(AM502240|pid:none) Leishmania infantum chromosome 22.     100   4e-20
EF146072_1(EF146072|pid:none) Populus trichocarpa clone WS0115_F...   100   6e-20
(P35131) RecName: Full=Ubiquitin-conjugating enzyme E2 8;       ...   100   6e-20
AF034946_1(AF034946|pid:none) Zea mays ubiquitin conjugating enz...   100   6e-20
AM494959_56(AM494959|pid:none) Leishmania braziliensis chromosom...   100   6e-20
(P35134) RecName: Full=Ubiquitin-conjugating enzyme E2 11;      ...   100   6e-20
BT053431_1(BT053431|pid:none) Medicago truncatula clone MTYFP_FQ...   100   7e-20
AP003446_10(AP003446|pid:none) Oryza sativa Japonica Group genom...   100   7e-20
AC159413_39(AC159413|pid:none) Trypanosoma brucei chromosome 7 c...   100   7e-20
AM464235_1(AM464235|pid:none) Vitis vinifera contig VV78X153506....   100   7e-20
EU957802_1(EU957802|pid:none) Zea mays clone 1623065 ubiquitin-c...   100   7e-20
EF084843_1(EF084843|pid:none) Picea sitchensis clone WS0291_G02 ...   100   7e-20
(Q9SLE4) RecName: Full=Ubiquitin carrier protein E2 29;         ...   100   7e-20
AY082009_1(AY082009|pid:none) Gossypium thurberi ubiquitin-conju...   100   7e-20
EU853458_1(EU853458|pid:none) Cucumis melo var. cantalupensis ub...   100   7e-20
CR382125_338(CR382125|pid:none) Kluyveromyces lactis strain NRRL...   100   7e-20
BT034735_1(BT034735|pid:none) Zea mays full-length cDNA clone ZM...   100   7e-20
CU928181_242(CU928181|pid:none) Zygosaccharomyces rouxii strain ...   100   7e-20
CR940352_300(CR940352|pid:none) Theileria annulata strain Ankara...    99   1e-19
FN392321_727(FN392321|pid:none) Pichia pastoris GS115 chromosome...    99   1e-19
AF001948_1(AF001948|pid:none) Pinus resinosa putative ubiquitin ...    99   1e-19
(Q9C9Y7) RecName: Full=Probable ubiquitin-conjugating enzyme E2 ...    99   1e-19
AY082005_1(AY082005|pid:none) Gossypium hirsutum ubiquitin-conju...    99   1e-19
GM966541_1(GM966541|pid:none) Sequence 1873 from Patent WO200814...    99   1e-19
AB074411_1(AB074411|pid:none) Oryza sativa Japonica Group mRNA f...    99   1e-19
(P15732) RecName: Full=Ubiquitin-conjugating enzyme E2-16 kDa;  ...    99   1e-19
DQ222513_1(DQ222513|pid:none) Solanum tuberosum clone 117E03 ubi...    99   1e-19
BT070291_1(BT070291|pid:none) Picea sitchensis clone WS02718_B23...    99   1e-19
BT070503_1(BT070503|pid:none) Picea sitchensis clone WS02732_O01...    99   1e-19
(P15731) RecName: Full=Ubiquitin-conjugating enzyme E2 4;       ...    99   1e-19
EF145004_1(EF145004|pid:none) Populus trichocarpa clone WS0111_H...    99   1e-19
GM966539_1(GM966539|pid:none) Sequence 1871 from Patent WO200814...    99   1e-19
BT070302_1(BT070302|pid:none) Picea sitchensis clone WS02719_E19...    99   1e-19
EU960465_1(EU960465|pid:none) Zea mays clone 225114 ubiquitin-co...    99   2e-19
CP000882_74(CP000882|pid:none) Hemiselmis andersenii chromosome ...    99   2e-19
AL844502_188(AL844502|pid:none) Plasmodium falciparum 3D7 chromo...    98   2e-19
AC007764_2(AC007764|pid:none) Genomic sequence for Arabidopsis t...    98   2e-19
AF461687_1(AF461687|pid:none) Pinus pinaster putative ubiquitin ...    98   2e-19
AB074412_1(AB074412|pid:none) Oryza sativa Japonica Group mRNA f...    98   2e-19
CR380951_194(CR380951|pid:none) Candida glabrata strain CBS138 c...    98   2e-19
T18512(T18512)hypothetical protein C0855w - malaria parasite (Pl...    98   2e-19
EU972165_1(EU972165|pid:none) Zea mays clone 376667 ubiquitin-co...    98   3e-19
EU976228_1(EU976228|pid:none) Zea mays clone 688590 ubiquitin-co...    98   3e-19
AM920437_1408(AM920437|pid:none) Penicillium chrysogenum Wiscons...    98   3e-19
AF076597_1(AF076597|pid:none) Dictyostelium discoideum ubiquitin...    98   3e-19
AY736121_1(AY736121|pid:none) Triticum aestivum ubiquitin-conjug...    98   3e-19
CR954214_340(CR954214|pid:none) Ostreococcus tauri strain OTTH05...    97   4e-19
CR382130_616(CR382130|pid:none) Yarrowia lipolytica strain CLIB1...    97   4e-19
CR382128_835(CR382128|pid:none) Yarrowia lipolytica strain CLIB1...    97   4e-19
BT046784_1(BT046784|pid:none) Salmo salar clone ssal-eve-547-308...    97   4e-19
AY082004_1(AY082004|pid:none) Gossypium hirsutum ubiquitin-conju...    97   5e-19
AY220735_1(AY220735|pid:none) Hordeum vulgare ubiquitin-conjugat...    97   5e-19
EF144962_1(EF144962|pid:none) Populus trichocarpa clone WS0111_C...    97   5e-19
AL110500_18(AL110500|pid:none) Caenorhabditis elegans YAC Y87G2A...    97   5e-19
EF083334_1(EF083334|pid:none) Picea sitchensis clone WS02724_H13...    97   5e-19
(Q17QG5) RecName: Full=Ubiquitin-conjugating enzyme E2 G2;      ...    97   6e-19
BT040054_1(BT040054|pid:none) Zea mays full-length cDNA clone ZM...    97   6e-19
BT075389_1(BT075389|pid:none) Osmerus mordax clone omor-eva-513-...    97   6e-19
DQ228115_1(DQ228115|pid:none) Proteomonas sulcata strain CCMP704...    96   8e-19
AP008208_133(AP008208|pid:none) Oryza sativa (japonica cultivar-...    96   8e-19
AY892462_1(AY892462|pid:none) Synthetic construct Homo sapiens c...    96   8e-19
BC076728_1(BC076728|pid:none) Xenopus laevis ubiquitin-conjugati...    96   8e-19
CR382125_546(CR382125|pid:none) Kluyveromyces lactis strain NRRL...    96   1e-18
AJ843120_1(AJ843120|pid:none) Plantago major mRNA for Ubiquitin-...    96   1e-18
CP000881_158(CP000881|pid:none) Hemiselmis andersenii chromosome...    96   1e-18
AL844508_209(AL844508|pid:none) Plasmodium falciparum 3D7 chromo...    96   1e-18
BT081849_1(BT081849|pid:none) Rana catesbeiana clone rcat-evr-52...    96   1e-18
BC055599_1(BC055599|pid:none) Danio rerio zgc:66323, mRNA (cDNA ...    96   1e-18
EF145179_1(EF145179|pid:none) Populus trichocarpa clone WS01121_...    95   2e-18
EU170471_1(EU170471|pid:none) Eucommia ulmoides ubiquitin conjug...    95   2e-18
BT074944_1(BT074944|pid:none) Osmerus mordax clone omor-rgc-511-...    95   2e-18
CU640366_966(CU640366|pid:none) Podospora anserina genomic DNA c...    95   2e-18
BC076753_1(BC076753|pid:none) Xenopus laevis MGC82328 protein, m...    95   2e-18
AE017346_284(AE017346|pid:none) Cryptococcus neoformans var. neo...    94   3e-18
(P51668) RecName: Full=Ubiquitin-conjugating enzyme E2 D1;      ...    94   3e-18
(P25867) RecName: Full=Ubiquitin-conjugating enzyme E2-17 kDa;  ...    94   3e-18
DQ284472_1(DQ284472|pid:none) Solanum tuberosum clone 116D11 ubi...    94   3e-18
FM992695_868(FM992695|pid:none) Candida dubliniensis CD36 chromo...    94   3e-18
AM920435_793(AM920435|pid:none) Penicillium chrysogenum Wisconsi...    94   3e-18
AC079279_3(AC079279|pid:none) Arabidopsis thaliana chromosome 1 ...    94   3e-18
(Q8L7T3) RecName: Full=Ubiquitin carrier protein E2 20;         ...    94   3e-18
AX406018_1(AX406018|pid:none) Sequence 433 from Patent WO0222660.      94   3e-18
AC117072_66(AC117072|pid:none) Dictyostelium discoideum chromoso...    94   3e-18
BT069408_1(BT069408|pid:none) Zea mays full-length cDNA clone ZM...    94   4e-18
BC142569_1(BC142569|pid:none) Xenopus laevis ubiquitin conjugati...    94   4e-18
(P46595) RecName: Full=Ubiquitin-conjugating enzyme E2 4;       ...    94   4e-18
(P43102) RecName: Full=Ubiquitin-conjugating enzyme E2 4;       ...    94   4e-18
AP007167_66(AP007167|pid:none) Aspergillus oryzae RIB40 genomic ...    94   4e-18
(O74196) RecName: Full=Ubiquitin-conjugating enzyme E2-16 kDa;  ...    94   4e-18
(P35129) RecName: Full=Ubiquitin-conjugating enzyme E2 2;       ...    94   4e-18
BC155782_1(BC155782|pid:none) Danio rerio zgc:56340, mRNA (cDNA ...    94   4e-18
EF146216_1(EF146216|pid:none) Populus trichocarpa clone WS0116_E...    94   5e-18
BT061792_1(BT061792|pid:none) Zea mays full-length cDNA clone ZM...    94   5e-18
AF032456_1(AF032456|pid:none) Homo sapiens ubiquitin conjugating...    94   5e-18
AF161722_1(AF161722|pid:none) Magnaporthe grisea ubiquitin-conju...    93   7e-18
I59365(I59365) ubiquitin conjugating enzyme - human  &L40146_1(L...    93   9e-18
(Q42540) RecName: Full=Ubiquitin-conjugating enzyme E2 7;       ...    93   9e-18
AM181595_1(AM181595|pid:none) Oesophagostomum dentatum mRNA for ...    93   9e-18
EU963040_1(EU963040|pid:none) Zea mays clone 256705 ubiquitin-co...    93   9e-18
AK095822_1(AK095822|pid:none) Homo sapiens cDNA FLJ38503 fis, cl...    93   9e-18
L00641_1(L00641|pid:none) Arabidopsis thaliana ubiquitin conjuga...    92   1e-17
FN392321_948(FN392321|pid:none) Pichia pastoris GS115 chromosome...    92   1e-17
BT077825_1(BT077825|pid:none) Lepeophtheirus salmonis clone lsal...    92   1e-17
BC077923_1(BC077923|pid:none) Xenopus laevis hypothetical LOC494...    92   2e-17
BT082300_1(BT082300|pid:none) Anoplopoma fimbria clone afim-evh-...    92   2e-17
BC059548_1(BC059548|pid:none) Danio rerio ubiquitin-conjugating ...    92   2e-17
BC048896_1(BC048896|pid:none) Danio rerio zgc:55886, mRNA (cDNA ...    92   2e-17
AY083611_1(AY083611|pid:none) Oryza sativa elicitor and UV light...    92   2e-17
AK152231_1(AK152231|pid:none) Mus musculus bone marrow macrophag...    92   2e-17
DQ887086_1(DQ887086|pid:none) Arachis hypogaea ubiquitin-conjuga...    92   2e-17
AJ277746_1(AJ277746|pid:none) Drosophila melanogaster mRNA for u...    92   2e-17
BC047863_1(BC047863|pid:none) Danio rerio zgc:56340, mRNA (cDNA ...    92   2e-17
BT057031_1(BT057031|pid:none) Salmo salar clone ssal-evd-502-245...    92   2e-17
(Q9C8X7) RecName: Full=Probable ubiquitin carrier protein E2 31;...    92   2e-17
BT079155_1(BT079155|pid:none) Esox lucius clone eluc-evq-525-194...    92   2e-17
(P61077) RecName: Full=Ubiquitin-conjugating enzyme E2 D3;      ...    92   2e-17
BT071650_1(BT071650|pid:none) Picea sitchensis clone WS0294_N24 ...    92   2e-17
BC066917_1(BC066917|pid:none) Homo sapiens ubiquitin-conjugating...    92   2e-17
EF576159_1(EF576159|pid:none) Oryza sativa (indica cultivar-grou...    92   2e-17
GM966535_1(GM966535|pid:none) Sequence 1867 from Patent WO200814...    91   3e-17
BC109525_1(BC109525|pid:none) Bos taurus ubiquitin-conjugating e...    91   3e-17
(P34477) RecName: Full=Probable ubiquitin-conjugating enzyme E2 ...    91   3e-17
BT057192_1(BT057192|pid:none) Salmo salar clone ssal-eve-549-287...    91   3e-17
BT057585_1(BT057585|pid:none) Salmo salar clone ssal-eve-534-384...    91   3e-17
BT056835_1(BT056835|pid:none) Salmo salar clone ssal-plnb-027-15...    91   3e-17
EF585789_1(EF585789|pid:none) Sonneratia caseolaris isolate Sonn...    91   3e-17
AC159432_15(AC159432|pid:none) Trypanosoma brucei chromosome 5 c...    91   3e-17
(Q06AA9) RecName: Full=Ubiquitin-conjugating enzyme E2 D2;      ...    91   3e-17
AM181594_1(AM181594|pid:none) Oesophagostomum dentatum mRNA for ...    91   3e-17
BT074151_1(BT074151|pid:none) Oncorhynchus mykiss clone omyk-evo...    91   3e-17
BC102100_1(BC102100|pid:none) Bos taurus ubiquitin-conjugating e...    91   5e-17
CR940353_825(CR940353|pid:none) Theileria annulata strain Ankara...    91   5e-17
AK099038_1(AK099038|pid:none) Oryza sativa Japonica Group cDNA c...    91   5e-17
BT056474_1(BT056474|pid:none) Salmo salar clone ssal-evd-521-050...    91   5e-17
EF585788_1(EF585788|pid:none) Sonneratia alba isolate Sonn199_1 ...    91   5e-17
BT057415_1(BT057415|pid:none) Salmo salar clone ssal-eve-568-290...    91   5e-17
BT079919_1(BT079919|pid:none) Esox lucius clone eluc-evq-517-214...    90   6e-17
EU244369_1(EU244369|pid:none) Haliotis diversicolor clone HDr4CJ...    90   6e-17
GM966557_1(GM966557|pid:none) Sequence 1889 from Patent WO200814...    90   6e-17
FN317000_1(FN317000|pid:none) Schistosoma japonicum isolate Anhu...    90   6e-17
BT045620_1(BT045620|pid:none) Salmo salar clone ssal-rgf-526-297...    90   6e-17
FN357392_23(FN357392|pid:none) Schistosoma mansoni genome sequen...    90   6e-17
AB105548_1(AB105548|pid:none) Xenopus laevis Xubc15 mRNA for ubi...    90   6e-17
AY813067_1(AY813067|pid:none) Schistosoma japonicum SJCHGC00720 ...    90   6e-17
AM494971_122(AM494971|pid:none) Leishmania braziliensis chromoso...    90   6e-17
(Q9Y818) RecName: Full=Ubiquitin-conjugating enzyme E2 15;      ...    90   6e-17
AB172309_1(AB172309|pid:none) Macaca fascicularis brain cDNA clo...    90   8e-17
AY891186_1(AY891186|pid:none) Synthetic construct Homo sapiens c...    90   8e-17
CR380951_188(CR380951|pid:none) Candida glabrata strain CBS138 c...    90   8e-17
BC079134_1(BC079134|pid:none) Rattus norvegicus ubiquitin-conjug...    90   8e-17
BT045559_1(BT045559|pid:none) Salmo salar clone ssal-rgf-524-350...    90   8e-17
BT043519_1(BT043519|pid:none) Salmo salar clone HM4_1156 ubiquit...    90   8e-17
AY281323_1(AY281323|pid:none) Xenopus laevis ubiquitin-conjugati...    90   8e-17
BC042331_1(BC042331|pid:none) Danio rerio ubiquitin-conjugating ...    90   8e-17
BC099169_1(BC099169|pid:none) Rattus norvegicus ubiquitin-conjug...    90   8e-17
(P52485) RecName: Full=Ubiquitin-conjugating enzyme E2-24 kDa;  ...    90   8e-17
BC061394_1(BC061394|pid:none) Xenopus tropicalis ubiquitin-conju...    90   8e-17
BT075359_1(BT075359|pid:none) Osmerus mordax clone omor-eva-519-...    90   8e-17
(P52483) RecName: Full=Ubiquitin-conjugating enzyme E2 E3;      ...    90   8e-17
(Q96LR5) RecName: Full=Ubiquitin-conjugating enzyme E2 E2;      ...    89   1e-16
DQ972954_1(DQ972954|pid:none) Sus scrofa UB2E2 mRNA, complete cds.     89   1e-16
BC082838_1(BC082838|pid:none) Xenopus laevis hypothetical LOC494...    89   1e-16
AC025726_13(AC025726|pid:none) Caenorhabditis elegans cosmid Y71...    89   1e-16
CR940352_416(CR940352|pid:none) Theileria annulata strain Ankara...    89   1e-16
(P42747) RecName: Full=Ubiquitin-conjugating enzyme E2 14;      ...    89   1e-16
AK009276_1(AK009276|pid:none) Mus musculus adult male tongue cDN...    89   1e-16
(Q91W82) RecName: Full=Ubiquitin-conjugating enzyme E2 E2;      ...    89   1e-16
AC117265_6(AC117265|pid:none) Oryza sativa (japonica cultivar-gr...    89   1e-16
BT074238_1(BT074238|pid:none) Oncorhynchus mykiss clone omyk-evo...    89   1e-16
BT038770_1(BT038770|pid:none) Zea mays full-length cDNA clone ZM...    89   1e-16
EU963388_1(EU963388|pid:none) Zea mays clone 261750 ubiquitin-co...    89   1e-16
CU928179_522(CU928179|pid:none) Zygosaccharomyces rouxii strain ...    89   1e-16
(Q3ZCF7) RecName: Full=Ubiquitin-conjugating enzyme E2 D3;      ...    89   1e-16
BT063635_1(BT063635|pid:none) Zea mays full-length cDNA clone ZM...    89   1e-16
DQ480743_1(DQ480743|pid:none) Rattus norvegicus clone ZX34 unkno...    89   2e-16
DQ887084_1(DQ887084|pid:none) Arachis hypogaea ubiquitin-conjuga...    89   2e-16
FN357511_11(FN357511|pid:none) Schistosoma mansoni genome sequen...    88   2e-16
(Q9LJZ5) RecName: Full=Ubiquitin carrier protein E2 19;         ...    88   2e-16
AE016820_168(AE016820|pid:none) Ashbya gossypii (= Eremothecium ...    88   2e-16
U93241_1(U93241|pid:none) Mus musculus Ubc7p homolog mRNA, compl...    88   2e-16
BT071782_1(BT071782|pid:none) Picea sitchensis clone WS0454_N05 ...    88   3e-16
BT074069_1(BT074069|pid:none) Oncorhynchus mykiss clone omyk-evo...    88   3e-16
EF145757_1(EF145757|pid:none) Populus trichocarpa clone WS0113_D...    88   3e-16
(P14682) RecName: Full=Ubiquitin-conjugating enzyme E2-34 kDa;  ...    88   3e-16
BT081539_1(BT081539|pid:none) Rana catesbeiana clone rcat-evr-53...    88   3e-16
EF145085_1(EF145085|pid:none) Populus trichocarpa clone WS01120_...    87   4e-16
(P25868) RecName: Full=Ubiquitin-conjugating enzyme E2 7;       ...    87   4e-16
FN357511_14(FN357511|pid:none) Schistosoma mansoni genome sequen...    87   4e-16
CP001330_132(CP001330|pid:none) Micromonas sp. RCC299 chromosome...    87   5e-16
AL590449_93(AL590449|pid:none) chromosome X of strain GB-M1 of E...    87   7e-16
EF095146_1(EF095146|pid:none) Homarus americanus ubiquitin-conju...    86   9e-16
BT044917_1(BT044917|pid:none) Salmo salar clone ssal-rgf-507-097...    86   9e-16
S61417(S61417;S61418;S72311)ubiquitin-protein ligase (EC 6.3.2.1...    86   9e-16
CP000584_457(CP000584|pid:none) Ostreococcus lucimarinus CCE9901...    86   9e-16
CP000500_516(CP000500|pid:none) Pichia stipitis CBS 6054 chromos...    86   9e-16
BT034799_1(BT034799|pid:none) Zea mays full-length cDNA clone ZM...    86   9e-16
EF082769_1(EF082769|pid:none) Picea sitchensis clone WS0277_E18 ...    86   9e-16
AK105320_1(AK105320|pid:none) Oryza sativa Japonica Group cDNA c...    86   9e-16
EF148316_1(EF148316|pid:none) Populus trichocarpa x Populus delt...    86   9e-16
EU952855_1(EU952855|pid:none) Zea mays clone 1291262 hypothetica...    86   1e-15
BT042345_1(BT042345|pid:none) Zea mays full-length cDNA clone ZM...    86   1e-15
AY826156_1(AY826156|pid:none) Aedes albopictus clone AL_265 ubiq...    86   1e-15
FN314566_1(FN314566|pid:none) Schistosoma japonicum isolate Anhu...    86   1e-15
CR382124_377(CR382124|pid:none) Kluyveromyces lactis strain NRRL...    86   1e-15
(Q86K32) RecName: Full=Probable ubiquitin-conjugating enzyme E2 ...    86   1e-15
FN357349_33(FN357349|pid:none) Schistosoma mansoni genome sequen...    85   2e-15
(Q9LJD7) RecName: Full=Constitutive photomorphogenesis protein 1...    85   2e-15
AL672098_4(AL672098|pid:none) Mouse DNA sequence from clone RP23...    85   2e-15
CR940347_711(CR940347|pid:none) Theileria annulata strain Ankara...    85   2e-15
U66493_1(U66493|pid:none) Metarhizium anisopliae ubiquitin conju...    85   2e-15
EU963442_1(EU963442|pid:none) Zea mays clone 262526 ubiquitin-co...    85   2e-15
BT078441_1(BT078441|pid:none) Lepeophtheirus salmonis clone lsal...    85   2e-15
EU284925_1(EU284925|pid:none) TSA: Elaeis guineensis EgEfMPOB001...    85   2e-15
AP007155_381(AP007155|pid:none) Aspergillus oryzae RIB40 genomic...    84   3e-15
AE014134_240(AE014134|pid:none) Drosophila melanogaster chromoso...    84   3e-15
CR382129_20(CR382129|pid:none) Yarrowia lipolytica strain CLIB12...    84   3e-15
CP001326_415(CP001326|pid:none) Micromonas sp. RCC299 chromosome...    84   3e-15
AP006852_178(AP006852|pid:none) Candida albicans genomic DNA, ch...    84   3e-15
CR954205_509(CR954205|pid:none) Ostreococcus tauri strain OTTH05...    84   3e-15
AF424641_1(AF424641|pid:none) Phytophthora infestans clone MY-03...    84   6e-15
AM270182_7(AM270182|pid:none) Aspergillus niger contig An08c0270...    84   6e-15
CR940347_494(CR940347|pid:none) Theileria annulata strain Ankara...    84   6e-15
AM712240_140(AM712240|pid:none) African swine fever virus OURT 8...    84   6e-15
FN392322_448(FN392322|pid:none) Pichia pastoris GS115 chromosome...    84   6e-15
BT081065_1(BT081065|pid:none) Caligus clemensi clone ccle-evs-51...    84   6e-15
BT038939_1(BT038939|pid:none) Zea mays full-length cDNA clone ZM...    83   7e-15
CU928174_488(CU928174|pid:none) Zygosaccharomyces rouxii strain ...    83   7e-15
DQ413231_1(DQ413231|pid:none) Acyrthosiphon pisum isolate WHAP03...    83   7e-15
DQ848992_1(DQ848992|pid:none) Trachemys scripta ubiquitin-conjug...    83   7e-15
U15971_1(U15971|pid:none) Oryza sativa ubiquitin conjugating enz...    83   9e-15
AE017345_305(AE017345|pid:none) Cryptococcus neoformans var. neo...    83   9e-15
FN357349_34(FN357349|pid:none) Schistosoma mansoni genome sequen...    83   9e-15
BC076537_1(BC076537|pid:none) Danio rerio zgc:91847, mRNA (cDNA ...    83   9e-15
EU431335_1(EU431335|pid:none) Marsupenaeus japonicus ubiquitin-c...    83   9e-15
AC146747_17(AC146747|pid:none) Medicago truncatula clone mth2-14...    83   9e-15
CU278516_1(CU278516|pid:none) Zebrafish DNA sequence from clone ...    83   9e-15
AE017345_391(AE017345|pid:none) Cryptococcus neoformans var. neo...    83   9e-15
AK122067_1(AK122067|pid:none) Oryza sativa Japonica Group cDNA c...    83   9e-15
BC044173_1(BC044173|pid:none) Danio rerio zgc:55452, mRNA (cDNA ...    82   1e-14
AE014296_2694(AE014296|pid:none) Drosophila melanogaster chromos...    82   1e-14
(Q4R4I1) RecName: Full=Ubiquitin-conjugating enzyme E2 N;       ...    82   1e-14
AF136176_1(AF136176|pid:none) Homo sapiens ubiquitin-conjugating...    82   1e-14
AE014296_2692(AE014296|pid:none) Drosophila melanogaster chromos...    82   1e-14
EU952491_1(EU952491|pid:none) Zea mays clone 1282033 ubiquitin-c...    82   1e-14
BC048523_1(BC048523|pid:none) Mus musculus predicted gene, EG237...    82   1e-14
CR382129_228(CR382129|pid:none) Yarrowia lipolytica strain CLIB1...    82   1e-14
BT011473_1(BT011473|pid:none) Drosophila melanogaster RE15288 fu...    82   1e-14
BT045267_1(BT045267|pid:none) Salmo salar clone ssal-rgf-517-009...    82   1e-14
BC053797_1(BC053797|pid:none) Xenopus laevis ubiquitin-conjugati...    82   1e-14
AE014296_727(AE014296|pid:none) Drosophila melanogaster chromoso...    82   2e-14
AE017344_267(AE017344|pid:none) Cryptococcus neoformans var. neo...    82   2e-14
CR382123_762(CR382123|pid:none) Kluyveromyces lactis strain NRRL...    82   2e-14
CU633899_608(CU633899|pid:none) Podospora anserina genomic DNA c...    82   2e-14
AL590444_62(AL590444|pid:none) chromosome IV of strain GB-M1 of ...    82   2e-14
(Q54XS6) RecName: Full=Probable ubiquitin-conjugating enzyme E2 ...    82   2e-14
AM494941_87(AM494941|pid:none) Leishmania braziliensis chromosom...    82   2e-14
(P0C8G5) RecName: Full=Ubiquitin-conjugating enzyme E2;         ...    82   2e-14
(P25869) RecName: Full=Ubiquitin-conjugating enzyme E2;         ...    82   2e-14
(P49427) RecName: Full=Ubiquitin-conjugating enzyme E2 R1;      ...    82   2e-14
AY135219_1(AY135219|pid:none) Pavlova lutheri ubiquitin-conjugat...    82   2e-14
A49630(A49630) ubiquitin conjugating enzyme - human (fragment)  ...    82   2e-14
(Q8CFI2) RecName: Full=Ubiquitin-conjugating enzyme E2 R1;      ...    82   2e-14
AY891504_1(AY891504|pid:none) Synthetic construct Homo sapiens c...    82   2e-14
BC074529_1(BC074529|pid:none) Xenopus tropicalis cell division c...    82   2e-14
AP007166_113(AP007166|pid:none) Aspergillus oryzae RIB40 genomic...    81   3e-14
AK005788_1(AK005788|pid:none) Mus musculus adult male testis cDN...    81   3e-14
FN357441_5(FN357441|pid:none) Schistosoma mansoni genome sequenc...    81   3e-14
AM270282_9(AM270282|pid:none) Aspergillus niger contig An12c0260...    81   3e-14
EU333281_1(EU333281|pid:none) Bursaphelenchus xylophilus ubiquit...    81   3e-14
(P52490) RecName: Full=Ubiquitin-conjugating enzyme E2 13;      ...    81   3e-14
CP001323_218(CP001323|pid:none) Micromonas sp. RCC299 chromosome...    81   3e-14
T14451(T14451) ubiquitin conjugating enzyme, E2 - wild cabbage (...    81   4e-14
AX406024_1(AX406024|pid:none) Sequence 439 from Patent WO0222660.      81   4e-14
(Q29503) RecName: Full=Ubiquitin-conjugating enzyme E2 R2;      ...    81   4e-14
BC075995_1(BC075995|pid:none) Danio rerio ubiquitin-conjugating ...    81   4e-14
AY148222_1(AY148222|pid:none) Sus scrofa E2 ubiquitin-conjugatin...    81   4e-14
U58652_1(U58652|pid:none) Oryctolagus cuniculus ubiquitin-conjug...    81   4e-14
DQ214034_1(DQ214034|pid:none) Taeniopygia guttata clone 0061P001...    81   4e-14
DQ311425_1(DQ311425|pid:none) Bombyx mori ubiquitin conjugating ...    81   4e-14
BT052401_1(BT052401|pid:none) Medicago truncatula clone MTYFD_FE...    81   4e-14
BC124046_1(BC124046|pid:none) Xenopus tropicalis ubiquitin-conju...    81   4e-14
BT081008_1(BT081008|pid:none) Caligus clemensi clone ccle-evs-50...    81   4e-14
DQ443216_1(DQ443216|pid:none) Bombyx mori ubiquitin conjugating ...    81   4e-14
AC145330_21(AC145330|pid:none) Medicago truncatula clone mth2-17...    81   4e-14
CU928168_68(CU928168|pid:none) Kluyveromyces thermotolerans stra...    81   4e-14
AY542993_1(AY542993|pid:none) Bigelowiella natans ubiquitin conj...    80   5e-14
AY389716_1(AY389716|pid:none) Hyacinthus orientalis ubiquitin-co...    80   5e-14
AK075703_1(AK075703|pid:none) Mus musculus adult male lung cDNA,...    80   5e-14
(Q4R5Y8) RecName: Full=Ubiquitin-conjugating enzyme E2 G1;      ...    80   5e-14
EU247218_1(EU247218|pid:none) Lycosa singoriensis clone LSsin186...    80   5e-14
AL844509_547(AL844509|pid:none) Plasmodium falciparum 3D7 chromo...    80   5e-14
FN392319_40(FN392319|pid:none) Pichia pastoris GS115 chromosome ...    80   5e-14
BT043660_1(BT043660|pid:none) Salmo salar clone HM5_1254 ubiquit...    80   5e-14
DQ144988_1(DQ144988|pid:none) Symbiodinium sp. C3 ubiquitin conj...    80   5e-14
(P52492) RecName: Full=Ubiquitin-conjugating enzyme E2-18 kDa;  ...    80   5e-14
DQ311426_1(DQ311426|pid:none) Bombyx mori ubiquitin conjugating ...    80   6e-14
AY892102_1(AY892102|pid:none) Synthetic construct Homo sapiens c...    80   6e-14
AP003804_13(AP003804|pid:none) Oryza sativa Japonica Group genom...    80   6e-14
(P61088) RecName: Full=Ubiquitin-conjugating enzyme E2 N;       ...    80   6e-14
BT076385_1(BT076385|pid:none) Caligus rogercresseyi clone crog-e...    80   6e-14
AY814691_1(AY814691|pid:none) Schistosoma japonicum SJCHGC02747 ...    80   6e-14
FN357441_2(FN357441|pid:none) Schistosoma mansoni genome sequenc...    80   6e-14
BT001441_1(BT001441|pid:none) Drosophila melanogaster GH25305 fu...    80   6e-14
AL139794_13(AL139794|pid:none) Leishmania major Friedlin chromos...    80   6e-14
BT030506_1(BT030506|pid:none) Bos taurus ubiquitin-conjugating e...    80   6e-14
CR548612_215(CR548612|pid:none) Paramecium tetraurelia macronucl...    80   6e-14
BC045512_1(BC045512|pid:none) Danio rerio ubiquitin-conjugating ...    80   6e-14
(P62253) RecName: Full=Ubiquitin-conjugating enzyme E2 G1;      ...    80   6e-14
AY811864_1(AY811864|pid:none) Schistosoma japonicum SJCHGC02746 ...    80   6e-14
AM920437_2378(AM920437|pid:none) Penicillium chrysogenum Wiscons...    80   6e-14
DQ217367_1(DQ217367|pid:none) Taeniopygia guttata clone 0058P004...    80   8e-14
AE016820_490(AE016820|pid:none) Ashbya gossypii (= Eremothecium ...    80   8e-14
DQ284494_1(DQ284494|pid:none) Solanum tuberosum clone 063D04 ubi...    80   8e-14
CP000497_294(CP000497|pid:none) Pichia stipitis CBS 6054 chromos...    80   8e-14
BC047985_1(BC047985|pid:none) Xenopus laevis ubiquitin-conjugati...    80   8e-14
(Q9NTT1) Putative ubiquitin-conjugating enzyme E2 D3-like protei...    80   8e-14
CU638744_764(CU638744|pid:none) Podospora anserina genomic DNA c...    80   8e-14
DQ241834_1(DQ241834|pid:none) Solanum tuberosum clone 180C02 ubi...    80   8e-14
CU928171_602(CU928171|pid:none) Kluyveromyces thermotolerans str...    80   8e-14
BC064184_1(BC064184|pid:none) Xenopus tropicalis ubiquitin-conju...    80   8e-14
CR380953_344(CR380953|pid:none) Candida glabrata strain CBS138 c...    79   1e-13
AY231898_1(AY231898|pid:none) Drosophila yakuba clone yak-em_eff...    79   1e-13
GM966098_1(GM966098|pid:none) Sequence 1430 from Patent WO200814...    79   1e-13
AB105545_1(AB105545|pid:none) Xenopus laevis Xubc3 mRNA for ubiq...    79   1e-13
AY813301_1(AY813301|pid:none) Schistosoma japonicum SJCHGC02551 ...    79   1e-13
AJ721068_1(AJ721068|pid:none) Gallus gallus mRNA for hypothetica...    79   1e-13
CP000587_13(CP000587|pid:none) Ostreococcus lucimarinus CCE9901 ...    79   1e-13
AY826157_1(AY826157|pid:none) Aedes albopictus clone AL_336 ubiq...    79   2e-13
AY232079_1(AY232079|pid:none) Drosophila yakuba clone yak-ad_crl...    79   2e-13
(Q9EQX9) RecName: Full=Ubiquitin-conjugating enzyme E2 N;       ...    79   2e-13
AK295354_1(AK295354|pid:none) Homo sapiens cDNA FLJ52264 complet...    79   2e-13
BT043572_1(BT043572|pid:none) Salmo salar clone HM4_2469 ubiquit...    79   2e-13
GM966102_1(GM966102|pid:none) Sequence 1434 from Patent WO200814...    79   2e-13
CR761379_1(CR761379|pid:none) Xenopus tropicalis finished cDNA, ...    78   2e-13
(Q9FI61) RecName: Full=Ubiquitin carrier protein E2 27;         ...    78   2e-13
BT081495_1(BT081495|pid:none) Rana catesbeiana clone rcat-evr-51...    78   2e-13
AE014134_2590(AE014134|pid:none) Drosophila melanogaster chromos...    78   2e-13
BT083349_1(BT083349|pid:none) Anoplopoma fimbria clone afim-evh-...    78   2e-13
BC124718_1(BC124718|pid:none) Danio rerio zgc:153687, mRNA (cDNA...    78   2e-13

>AJ580839_1(AJ580839|pid:none) Nicotiana benthamiana mRNA for SUMO
           E2 conjugating enzyme SCE1 (sce1 gene).
          Length = 160

 Score =  231 bits (588), Expect = 2e-59
 Identities = 98/155 (63%), Positives = 126/155 (81%)
 Frame = +1

Query: 76  GISSARLSEERKNWRRDHPYGFFARPSTNTDGSLNLYVWNCGIPGKTKTNWEGGVYPLIM 255
           GI+  RL+EERK WR++HP+GF A+P T +DGS+NL VW+C IPGK  T+WEGG YP+ +
Sbjct: 4   GIARGRLAEERKAWRKNHPHGFVAKPETLSDGSVNLMVWHCSIPGKAGTDWEGGFYPVTI 63

Query: 256 EFTEDYPSKPPKCRFPKDFFHPNVYPSGTVCLSILNEEADWKPSVTIKTVLLGIQDLLDN 435
            F+EDYPSKPPKC+FP+ FFHPNVYPSGTVCLSILNE++ W+P++T+K +L+GIQDLLD
Sbjct: 64  HFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQ 123

Query: 436 PNPKSPAQQLPIHLFLTNKEEYDKKVKAQSKVYPP 540
           PNP  PAQ    HLF+ +  EY K+V+ Q+K YPP
Sbjct: 124 PNPADPAQTEGYHLFIQDAIEYKKRVRLQAKQYPP 158

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,097,551,532
Number of extensions: 23514965
Number of successful extensions: 59248
Number of sequences better than 10.0: 1134
Number of HSP's gapped: 58342
Number of HSP's successfully gapped: 1140
Length of query: 237
Length of database: 1,040,966,779
Length adjustment: 125
Effective length of query: 112
Effective length of database: 640,431,154
Effective search space: 71728289248
Effective search space used: 71728289248
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
PSORT 

 psg: 0.91  gvh: 0.53  alm: 0.31  top: 0.60  tms: 0.07  mit: 0.25  mip: 0.05
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.06  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 1.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 48.0 %: nuclear
	 28.0 %: cytoplasmic
	  8.0 %: Golgi
	  8.0 %: mitochondrial
	  4.0 %: plasma membrane
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U06978-1 is nuc
VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0