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Dicty_cDB
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U01437-1
Contig ID Contig-U01437-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U01437-1 (Contig-U01437-1Q) /CSM_Contig/Contig-U01437-1Q.Seq.d
ATTTCAGAGAACGGTTTATTAGAGTCACCAACATCACCAATAAGAACATC
ATCAACCCCAACAACACCAACATCACCACCATTTATANCATCACCACCAT
TTATAACATCGCCAAAAGGTTTAAATTCACCAAGAAGATTAGTTGGTTTC
TTTTCAAAATCAACATCCTATCAATCATTATTGGCAAACAACAACAACAA
CAACAACAATAGCAACAACAGTAACAATA
Gap no gap
Contig length 229
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 1265072
End point 1264843
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U01437
List of clone(s) 

est1=SLJ640F,1,230
Translated Amino Acid sequence 
ISENGLLESPTSPIRTSSTPTTPTSPPFIXSPPFITSPKGLNSPRRLVGFFSKSTSYQSL
LANNNNNNNNSNNSNN
Translated Amino Acid sequence (All Frames) 
Frame A:
ISENGLLESPTSPIRTSSTPTTPTSPPFIXSPPFITSPKGLNSPRRLVGFFSKSTSYQSL
LANNNNNNNNSNNSNN


Frame B:
fqrtvy*shqhhq*ehhqpqqhqhhhhlxhhhhl*hrqkv*ihqed*lvsfqnqhpinhy
wqtttttttiattvti


Frame C:
frerfirvtnitnkniinpnntnittiyxittiyniakrfkftkkiswflfkinilsiii
gkqqqqqqq*qqq*q
own update 2004. 6. 7
Homology vs CSM-cDNA 
Query= Contig-U01437-1 (Contig-U01437-1Q)
/CSM_Contig/Contig-U01437-1Q.Seq.d
         (229 letters)

Database: CSM
           8361 sequences; 7,895,291 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U01437-1 (Contig-U01437-1Q) /CSM_Contig/Conti...   359  1e-99
Contig-U11806-1 (Contig-U11806-1Q) /CSM_Contig/Conti...    46  2e-05
Contig-U12210-1 (Contig-U12210-1Q) /CSM_Contig/Conti...    40  0.001
Contig-U11209-1 (Contig-U11209-1Q) /CSM_Contig/Conti...    40  0.001
Contig-U11475-1 (Contig-U11475-1Q) /CSM_Contig/Conti...    38  0.005
Contig-U06693-1 (Contig-U06693-1Q) /CSM_Contig/Conti...    38  0.005
Contig-U03900-1 (Contig-U03900-1Q) /CSM_Contig/Conti...    38  0.005
Contig-U03836-1 (Contig-U03836-1Q) /CSM_Contig/Conti...    38  0.005
Contig-U12645-1 (Contig-U12645-1Q) /CSM_Contig/Conti...    36  0.021
Contig-U11445-1 (Contig-U11445-1Q) /CSM_Contig/Conti...    34  0.085

>Contig-U01437-1 (Contig-U01437-1Q) /CSM_Contig/Contig-U01437-1Q.Seq.d
          Length = 229

 Score =  359 bits (181), Expect = 1e-99
 Identities = 184/184 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttcagagaacggtttattagagtcaccaacatcaccaataagaacatcatcaacccca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atttcagagaacggtttattagagtcaccaacatcaccaataagaacatcatcaacccca 60

                                                                       
Query: 61  acaacaccaacatcaccaccatttatancatcaccaccatttataacatcgccaaaaggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acaacaccaacatcaccaccatttatancatcaccaccatttataacatcgccaaaaggt 120

                                                                       
Query: 121 ttaaattcaccaagaagattagttggtttcttttcaaaatcaacatcctatcaatcatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaaattcaccaagaagattagttggtttcttttcaaaatcaacatcctatcaatcatta 180

               
Query: 181 ttgg 184
           ||||
Sbjct: 181 ttgg 184


>Contig-U11806-1 (Contig-U11806-1Q) /CSM_Contig/Contig-U11806-1Q.Seq.d
          Length = 1162

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 26  caccaacatcaccaataagaacatcatcaaccccaacaacaccaaca 72
           |||||||| |||||| || |||| || |||| |||||||||||||||
Sbjct: 662 caccaacaacaccaacaacaacaccaacaacaccaacaacaccaaca 708


 Score = 42.1 bits (21), Expect = 3e-04
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 26  caccaacatcaccaataagaacatcatcaaccccaacaacaccaacatcacca 78
           |||||||| |||||| || | || || |||| ||||||||||||||| |||||
Sbjct: 653 caccaacaacaccaacaacaccaacaacaacaccaacaacaccaacaacacca 705


 Score = 36.2 bits (18), Expect = 0.021
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                     
Query: 53  caaccccaacaacaccaacatcacca 78
           |||| ||||||||||||||| |||||
Sbjct: 650 caacaccaacaacaccaacaacacca 675


 Score = 34.2 bits (17), Expect = 0.085
 Identities = 26/29 (89%)
 Strand = Plus / Plus

                                        
Query: 53  caaccccaacaacaccaacatcaccacca 81
           |||| ||||||||||||||| || |||||
Sbjct: 659 caacaccaacaacaccaacaacaacacca 687


 Score = 32.2 bits (16), Expect = 0.33
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                               
Query: 59  caacaacaccaacatcacca 78
           |||||||||||||| |||||
Sbjct: 647 caacaacaccaacaacacca 666


>Contig-U12210-1 (Contig-U12210-1Q) /CSM_Contig/Contig-U12210-1Q.Seq.d
          Length = 2168

 Score = 40.1 bits (20), Expect = 0.001
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 29  caacatcaccaataagaacatcatcaaccccaacaacaccaaca 72
           ||||| |||||| || ||||||||||||  |||||||| |||||
Sbjct: 200 caacaacaccaacaacaacatcatcaacaacaacaacaacaaca 243


 Score = 34.2 bits (17), Expect = 0.085
 Identities = 20/21 (95%)
 Strand = Plus / Plus

                                
Query: 58  ccaacaacaccaacatcacca 78
           ||||||||| |||||||||||
Sbjct: 256 ccaacaacaacaacatcacca 276


 Score = 34.2 bits (17), Expect = 0.085
 Identities = 32/37 (86%)
 Strand = Plus / Plus

                                                
Query: 45  aacatcatcaaccccaacaacaccaacatcaccacca 81
           |||||||||||   |||||||||||||| || |||||
Sbjct: 147 aacatcatcaattacaacaacaccaacaccaacacca 183


 Score = 32.2 bits (16), Expect = 0.33
 Identities = 37/44 (84%)
 Strand = Plus / Plus

                                                      
Query: 29 caacatcaccaataagaacatcatcaaccccaacaacaccaaca 72
          |||||||||||| || |||| || ||||| ||||| || |||||
Sbjct: 14 caacatcaccaacaacaacaacaacaaccacaacaccatcaaca 57


 Score = 32.2 bits (16), Expect = 0.33
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                               
Query: 59  caacaacaccaacatcacca 78
           |||||||| |||||||||||
Sbjct: 119 caacaacaacaacatcacca 138


 Score = 32.2 bits (16), Expect = 0.33
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                              
Query: 59 caacaacaccaacatcacca 78
          |||||||| |||||||||||
Sbjct: 5  caacaacaacaacatcacca 24


 Score = 32.2 bits (16), Expect = 0.33
 Identities = 19/20 (95%)
 Strand = Plus / Plus

                               
Query: 59  caacaacaccaacatcacca 78
           |||||||| |||||||||||
Sbjct: 239 caacaacaacaacatcacca 258


 Score = 28.2 bits (14), Expect = 5.2
 Identities = 23/26 (88%)
 Strand = Plus / Plus

                                     
Query: 29  caacatcaccaataagaacatcatca 54
           |||||||||||| || |||| |||||
Sbjct: 248 caacatcaccaacaacaacaacatca 273


  Database: CSM
    Posted date:  Jun 7, 2004  8:33 AM
  Number of letters in database: 7,895,291
  Number of sequences in database:  8361
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5292
Number of Sequences: 8361
Number of extensions: 5292
Number of successful extensions: 1937
Number of sequences better than 10.0: 310
length of query: 229
length of database: 7,895,291
effective HSP length: 15
effective length of query: 214
effective length of database: 7,769,876
effective search space: 1662753464
effective search space used: 1662753464
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 4.27
Homology vs DNA 
Query= Contig-U01437-1 (Contig-U01437-1Q) /CSM_Contig/Contig-U01437-1Q.Seq.d
         (229 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU060408) Dictyostelium discoideum slug cDNA, clone SLJ640.      359   3e-95  1
(AU060407) Dictyostelium discoideum slug cDNA, clone SLJ639.      161   1e-35  1
(AC136729) Mus musculus chromosome 3, clone RP23-175I24, com...    42   4e-04  2
(Z98747) Human DNA sequence from clone RP1-37J18 on chromoso...    42   0.002  2
(AC110347) Rattus norvegicus clone CH230-64P11, WORKING DRAF...    40   0.006  2
(CU855608) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    40   0.006  2
(CT954289) N.leucogenys DNA sequence from clone CH271-183B5.       40   0.006  2
(DY251662) PMAH-aaa12f06.g1 Lamprey_EST_Olfactory Petromyzon...    38   0.008  2
(AC192509) Cavia porcellus clone CH234-458E4, WORKING DRAFT ...    30   0.018  3
(AC159813) Mus musculus BAC clone RP23-386L9 from chromosome...    40   0.023  2
(DC615564) Lethenteron japonicum cDNA, clone: Lamprey_liver_...    48   0.029  2
(EG609161) KIDNEYF098374L11 POSSUM_01-POSSUM-KIDNEY-2KB Tric...    50   0.035  1
(EC291216) BRAINF089532N13 POSSUM_01-POSSUM-C-BRAIN-2KB Tric...    50   0.035  1
(GD739755) 454GmaGlobSeed482404 Soybean Seeds Containing Glo...    50   0.035  1
(AC114665) Mus musculus chromosome 3 clone RP24-173A7 map 3,...    34   0.081  2
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701...    36   0.085  2
(EJ534979) 1092955252601 Global-Ocean-Sampling_GS-29-01-01-1...    36   0.10   2
(CE283413) tigr-gss-dog-17000333778010 Dog Library Canis lup...    40   0.10   2
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975...    42   0.16   5
(FD269360) CBFA15748.g1 CBFA: Normalized cDNA library made f...    34   0.20   2
(FD269359) CBFA15748.b1 CBFA: Normalized cDNA library made f...    34   0.20   2
(AC196636) Homo sapiens chromosome 19 PCR product, complete ...    32   0.21   4
(FD284398) CBFA26531.g1 CBFA: Normalized cDNA library made f...    34   0.24   2
(FD284397) CBFA26531.b1 CBFA: Normalized cDNA library made f...    34   0.24   2
(FD312847) CBFA45484.g1 CBFA: Normalized cDNA library made f...    34   0.25   2
(FD312846) CBFA45484.b1 CBFA: Normalized cDNA library made f...    34   0.25   2
(FD320035) CBFA8954.g1 CBFA: Normalized cDNA library made fr...    34   0.27   2
(FD301675) CBFA3930.g1 CBFA: Normalized cDNA library made fr...    34   0.29   2
(FD306451) CBFA41970.g1 CBFA: Normalized cDNA library made f...    34   0.30   2
(FD306450) CBFA41970.b1 CBFA: Normalized cDNA library made f...    34   0.30   2
(AC137276) Rattus norvegicus clone CH230-unknown, *** SEQUEN...    34   0.30   2
(AC097851) Rattus norvegicus clone CH230-98N2, *** SEQUENCIN...    34   0.30   2
(AC135664) Rattus norvegicus clone CH230-42D10, *** SEQUENCI...    34   0.30   2
(AC111998) Rattus norvegicus clone CH230-54H8, WORKING DRAFT...    34   0.31   2
(AC110658) Rattus norvegicus clone CH230-195K14, WORKING DRA...    34   0.31   2
(AC103214) Rattus norvegicus clone CH230-13K21, *** SEQUENCI...    38   0.31   2
(AC199698) Canis lupus familiaris clone XX-56N1, *** SEQUENC...    34   0.31   2
(FD273631) CBFA19020.g1 CBFA: Normalized cDNA library made f...    34   0.31   2
(FD273630) CBFA19020.b1 CBFA: Normalized cDNA library made f...    34   0.31   2
(AC128626) Rattus norvegicus clone CH230-262D20, WORKING DRA...    38   0.31   2
(AL929344) Zebrafish DNA sequence from clone DKEYP-115D2 in ...    38   0.32   2
(FD310365) CBFA44123.g1 CBFA: Normalized cDNA library made f...    34   0.32   2
(FD310364) CBFA44123.b1 CBFA: Normalized cDNA library made f...    34   0.32   2
(FD301674) CBFA3930.b1 CBFA: Normalized cDNA library made fr...    34   0.34   2
(FD270040) CBFA16176.g1 CBFA: Normalized cDNA library made f...    34   0.34   2
(FD270039) CBFA16176.b1 CBFA: Normalized cDNA library made f...    34   0.34   2
(FD283689) CBFA26125.g1 CBFA: Normalized cDNA library made f...    34   0.35   2
(FD295895) CBFA3498.g1 CBFA: Normalized cDNA library made fr...    34   0.36   2
(FD279759) CBFA2381.g1 CBFA: Normalized cDNA library made fr...    34   0.36   2
(FD272270) CBFA1814.g1 CBFA: Normalized cDNA library made fr...    34   0.37   2
(FD278997) CBFA23371.g1 CBFA: Normalized cDNA library made f...    34   0.37   2
(FD299249) CBFA37906.g1 CBFA: Normalized cDNA library made f...    34   0.37   2
(FD290818) CBFA31241.g1 CBFA: Normalized cDNA library made f...    34   0.37   2
(FD287528) CBFA29222.g1 CBFA: Normalized cDNA library made f...    34   0.37   2
(FD278996) CBFA23371.b1 CBFA: Normalized cDNA library made f...    34   0.37   2
(FD282807) CBFA25602.g1 CBFA: Normalized cDNA library made f...    34   0.38   2
(FD299207) CBFA37883.g1 CBFA: Normalized cDNA library made f...    34   0.39   2
(FD310222) CBFA44042.g1 CBFA: Normalized cDNA library made f...    34   0.39   2
(FD311789) CBFA44899.b1 CBFA: Normalized cDNA library made f...    34   0.40   2
(FD311790) CBFA44899.g1 CBFA: Normalized cDNA library made f...    34   0.40   2
(AU034261) Dictyostelium discoideum slug cDNA, clone SLC340.       38   0.41   2
(AU053214) Dictyostelium discoideum slug cDNA, clone SLI158.       38   0.41   2
(AL833795) Mouse DNA sequence from clone RP23-81B16 on chrom...    46   0.55   1
(BT050566) Drosophila melanogaster FI04833 full insert cDNA.       46   0.55   1
(AE014298) Drosophila melanogaster chromosome X, complete se...    46   0.55   1
(AC104511) Drosophila melanogaster X BAC RP98-39D14 (Roswell...    46   0.55   1
(AC168693) Strongylocentrotus purpuratus clone R3-3014H5, WO...    46   0.55   1
(AU053361) Dictyostelium discoideum slug cDNA, clone SLI462.       46   0.55   1
(BJ396379) Dictyostelium discoideum cDNA clone:dds42p17, 5' ...    46   0.55   1
(EY110256) CAZI6703.fwd CAZI Artemisia annua normalized leaf...    46   0.55   1
(DR416998) gPGC_EST06840 Embryonic gonadal PGC cDNA Library ...    40   0.61   2
(AA449398) zx04e11.r1 Soares_total_fetus_Nb2HF8_9w Homo sapi...    34   0.87   2
(AC219193) Zea mays chromosome 9 clone ZMMBBb-226F15; ZMMBBb...    40   1.1    2
(CV334254) IL3-NT0280-200201-456-G07 NT0280 Homo sapiens cDN...    42   1.1    2
(AC129154) Rattus norvegicus clone CH230-116G13, *** SEQUENC...    34   1.1    2
(BX922548) Sus Scrofa library (scan) clone scan0018.j.15, 5p...    34   1.1    2
(AC095958) Rattus norvegicus clone CH230-26I11, *** SEQUENCI...    32   1.1    2
(AC097555) Rattus norvegicus clone CH230-214G8, WORKING DRAF...    32   1.1    2
(AC111612) Rattus norvegicus clone CH230-256C14, WORKING DRA...    34   1.1    2
(AC009130) Homo sapiens chromosome 16 clone RP11-501P17, WOR...    36   1.1    2
(AC162690) Mus musculus chromosome 5, clone RP24-170F2, comp...    34   1.1    2
(AC183534) Pan troglodytes BAC clone CH251-526C24 from chrom...    36   1.1    2
(CT954294) N.leucogenys DNA sequence from clone CH271-228P23.      36   1.1    2
(AC162694) Mus musculus chromosome 5 clone RP24-214G12 map 5...    34   1.1    2
(AC147651) Homo sapiens BAC clone RP13-689E11 from 7, comple...    36   1.1    2
(AC141384) Rattus norvegicus clone CH230-242J5, WORKING DRAF...    34   1.1    2
(AC144526) Homo sapiens chromosome 7 clone RP13-632A2, WORKI...    36   1.1    2
(BX323063) Human DNA sequence *** SEQUENCING CANCELLED *** f...    34   1.2    2
(AC140533) Homo sapiens chromosome 16 clone XXfos-80661H4, W...    36   1.2    2
(AL954719) Human DNA sequence from clone RP11-376P8 on chrom...    34   1.2    2
(AC124013) Homo sapiens BAC clone RP13-615K3 from 4, complet...    32   1.3    2
(ER860971) PPTFY56TR Solanum tuberosum RHPOTKEY BAC ends Sol...    36   1.5    2
(ER792216) PPTD572TF Solanum tuberosum RHPOTKEY BAC ends Sol...    36   1.5    2
(CE438326) tigr-gss-dog-17000335895076 Dog Library Canis lup...    32   1.5    2
(FE044359) LV_ES_RA02J02r Litopenaeus vannamei eyestalk cDNA...    36   1.5    2
(FE044360) LV_ES_RA02L02f Litopenaeus vannamei eyestalk cDNA...    36   1.5    2
(AU060486) Dictyostelium discoideum slug cDNA, clone SLJ883.       34   1.6    2
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643...    38   1.6    8
(AF310888) Dictyostelium discoideum RacC (racC) gene, comple...    38   1.8    2
(AL355314) Human DNA sequence from clone RP11-598C10 on chro...    44   1.8    2
(CQ342865) Sequence 16959 from Patent WO0157275.                   40   1.9    2
(CQ305679) Sequence 16784 from Patent WO0186003.                   40   1.9    2
(CQ268652) Sequence 16913 from Patent WO0157277.                   40   1.9    2
(CQ230516) Sequence 17355 from Patent WO0157273.                   40   1.9    2
(CQ207069) Sequence 9346 from Patent WO0157271.                    40   1.9    2
(CQ182653) Sequence 14049 from Patent WO0157274.                   40   1.9    2
(CQ147278) Sequence 17300 from Patent WO0157276.                   40   1.9    2
(CQ108641) Sequence 17500 from Patent WO0157272.                   40   1.9    2
(CQ077631) Sequence 13431 from Patent WO0157278.                   40   1.9    2
(CQ058294) Sequence 9114 from Patent WO0157270.                    40   1.9    2
(CR727516) Tetraodon nigroviridis full-length cDNA.                40   2.0    2
(CR847567) Zebrafish DNA sequence from clone CH211-233B17 in...    44   2.2    1
(BX927252) Zebrafish DNA sequence from clone CH211-212O10 in...    44   2.2    1
(EU094487) Amaranthus hypochondriacus clone AHAAC017 microsa...    44   2.2    1
(GC699082) Sequence 14327 from patent US 6812339.                  44   2.2    1
(GC699081) Sequence 14326 from patent US 6812339.                  44   2.2    1
(GC697556) Sequence 12801 from patent US 6812339.                  44   2.2    1
(GC697139) Sequence 12384 from patent US 6812339.                  44   2.2    1
(CR936320) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    44   2.2    1
(AC182335) Oryctolagus cuniculus clone LB1-114P20, WORKING D...    44   2.2    1
(AC180840) Strongylocentrotus purpuratus clone R3-3069P1, WO...    44   2.2    1
(AC180752) Strongylocentrotus purpuratus clone R3-3021P19, W...    44   2.2    1
(AC178239) Strongylocentrotus purpuratus clone R3-3086F16, W...    44   2.2    1
(AC176193) Strongylocentrotus purpuratus clone R3-3064A03, W...    44   2.2    1
(EJ426752) 1093015232200 Global-Ocean-Sampling_GS-28-01-01-1...    44   2.2    1
(CZ532213) SRAA-aac77e03.b1 Strongyloides ratti whole genome...    44   2.2    1
(CL531311) trib004xp11.b1 T. reesei HindIII BAC library Hypo...    44   2.2    1
(AG099429) Pan troglodytes DNA, clone: PTB-101L07.F.               44   2.2    1
(EC129321) HVE00008898 Hartmannella vermiformis Normalized l...    44   2.2    1
(DN818181) G.hir-seedling 1381 3 and 5 week old seedlings Go...    44   2.2    1
(BM048546) 603625072F1 NIH_MGC_40 Homo sapiens cDNA clone IM...    44   2.2    1
(AA680947) LmFrAm0555 Leishmania major Amastigote Lambda Zap...    44   2.2    1
(GH151064) G994P164RM6.T0 Neurospora crassa cDNA - 1 hour Ni...    44   2.2    1
(GH141037) G994P142RO21.T0 Neurospora crassa cDNA - 1 hour N...    44   2.2    1
(GH124500) G994P16RG7.T0 Neurospora crassa cDNA - 1 hour Nit...    44   2.2    1
(GE979684) G1219P132RM9.T0 Neurospora crassa cDNA - 7 Days P...    44   2.2    1
(GE968530) G1219P116RA14.T0 Neurospora crassa cDNA - 7 Days ...    44   2.2    1
(GE944428) G1176P141RC14.T0 Neurospora crassa cDNA - 1 hour ...    44   2.2    1
(GE932479) G1176P120FL17.T0 Neurospora crassa cDNA - 1 hour ...    44   2.2    1
(GE928100) G1176P119RI3.T0 Neurospora crassa cDNA - 1 hour O...    44   2.2    1
(GE926201) G1176P112RG5.T0 Neurospora crassa cDNA - 1 hour O...    44   2.2    1
(GE923034) G1176P16RC16.T0 Neurospora crassa cDNA - 1 hour O...    44   2.2    1
(FK392161) 454GmaGlobSeed126793 Soybean Seeds Containing Glo...    44   2.2    1
(EY338533) CAWY9074.rev CAWY Helobdella robusta Subtracted E...    44   2.2    1
(EY309837) CAWX21814.rev CAWX Helobdella robusta Primary Ear...    44   2.2    1
(AX647283) Sequence 1475 from Patent EP1270724.                    30   2.2    3
(BJ381702) Dictyostelium discoideum cDNA clone:ddc42k08, 3' ...    36   2.7    2
(CD477118) eca01-35ms2-b05 Eca01 Eschscholzia californica cD...    30   3.0    3
(BJ348296) Dictyostelium discoideum cDNA clone:dda32e19, 3' ...    36   3.2    2
(BJ348080) Dictyostelium discoideum cDNA clone:dda32j01, 3' ...    36   3.4    2
(BJ404441) Dictyostelium discoideum cDNA clone:dds28d17, 3' ...    40   3.6    2
(BJ403093) Dictyostelium discoideum cDNA clone:dds24d02, 3' ...    40   3.6    2
(CR382133) Debaryomyces hansenii strain CBS767 chromosome A ...    30   3.6    2
(BJ406583) Dictyostelium discoideum cDNA clone:dds35b23, 3' ...    36   3.7    2
(BJ355471) Dictyostelium discoideum cDNA clone:dda57o03, 3' ...    36   3.8    2
(BJ353136) Dictyostelium discoideum cDNA clone:dda49h06, 3' ...    36   3.8    2
(BJ382132) Dictyostelium discoideum cDNA clone:ddc43b03, 3' ...    36   3.9    2
(BJ349787) Dictyostelium discoideum cDNA clone:dda37k17, 3' ...    40   3.9    2
(BJ404934) Dictyostelium discoideum cDNA clone:dds30h02, 3' ...    40   3.9    2
(BJ357321) Dictyostelium discoideum cDNA clone:dda63m03, 3' ...    40   4.0    2
(BJ403974) Dictyostelium discoideum cDNA clone:dds26k23, 3' ...    36   4.0    2
(AC127179) Rattus norvegicus clone CH230-121D22, *** SEQUENC...    32   4.0    2
(BJ407670) Dictyostelium discoideum cDNA clone:dds43d07, 3' ...    40   4.0    2
(AC096037) Rattus norvegicus clone CH230-22M3, WORKING DRAFT...    30   4.0    2
(AC095113) Rattus norvegicus clone CH230-7L3, WORKING DRAFT ...    32   4.1    2
(AC103158) Rattus norvegicus clone CH230-201I20, WORKING DRA...    32   4.1    2
(AC209482) Saimiri boliviensis boliviensis clone CH254-180D1...    34   4.1    2
(BJ355894) Dictyostelium discoideum cDNA clone:dda58f17, 3' ...    40   4.1    2
(AC201620) Strongylocentrotus purpuratus clone R3-9N3, WORKI...    34   4.2    2
(AC027726) Homo sapiens clone RP11-815E8, WORKING DRAFT SEQU...    30   4.2    2
(AC020895) Homo sapiens chromosome 19 clone CTC-312O10, comp...    30   4.2    2
(AC178575) Strongylocentrotus purpuratus clone R3-113K17, WO...    32   4.2    2
(BJ403261) Dictyostelium discoideum cDNA clone:dds24f16, 3' ...    40   4.2    2
(AC179125) Strongylocentrotus purpuratus clone R3-4011L11, W...    32   4.3    2
(AC138147) Polypterus bichir clone -9999G24, *** SEQUENCING ...    32   4.3    2
(AC177035) Strongylocentrotus purpuratus clone R3-1038H02, W...    34   4.3    2
(GC865534) Sequence 180779 from patent US 6812339.                 40   4.3    2
(BJ356835) Dictyostelium discoideum cDNA clone:dda61h18, 3' ...    40   4.4    2
(AX571885) Sequence 3 from Patent WO02066644.                      30   4.4    2
(DQ217942) Homo sapiens EGF-like module containing mucin-lik...    30   4.4    2
(AC068358) Homo sapiens chromosome 8 clone RP11-113I18 map 8...    30   4.5    2
(CE796442) tigr-gss-dog-17000317562370 Dog Library Canis lup...    30   4.6    3
(FE620158) CBYY2671.g1 CBYY Panicum virgatum Kanlow crown Pa...    40   4.6    2
(CD476478) eca01-32ms1-e08 Eca01 Eschscholzia californica cD...    30   4.8    3
(FD962675) RR1G636TF RR1(CS) Raphanus raphanistrum subsp. ma...    34   4.9    3
(BJ439038) Dictyostelium discoideum cDNA clone:ddv39b10, 3' ...    36   5.0    2
(AG600890) Mus musculus molossinus DNA, clone:MSMg01-532N04....    38   5.5    2
(AZ685166) ENTLG11TF Entamoeba histolytica Sheared DNA Entam...    34   5.5    2
(EL359934) CCEM4689.b1_A21.ab1 CCE(LMS) endive Cichorium end...    32   5.5    2
(EH702778) CCIS1636.b1_H01.ab1 CCI(LMS) chicory Cichorium in...    32   5.5    2
(EL357608) CCEM2424.b1_P05.ab1 CCE(LMS) endive Cichorium end...    32   5.6    2
(EH698526) CCIS10356.b1_H22.ab1 CCI(LMS) chicory Cichorium i...    32   5.6    2
(EH709523) CCIS8826.b1_D24.ab1 CCI(LMS) chicory Cichorium in...    32   5.6    2
(EH708513) CCIS7811.b1_F09.ab1 CCI(LMS) chicory Cichorium in...    32   5.6    2
(EL355060) CCEM11709.b1_J23.ab1 CCE(LMS) endive Cichorium en...    32   5.6    2
(EH706252) CCIS540.b1_H15.ab1 CCI(LMS) chicory Cichorium int...    32   5.6    2
(FD914527) CBOX18226.rev CBOX Volvox carteri f. nagariensis ...    34   5.6    2
(BJ325542) Dictyostelium discoideum cDNA clone:dda1g08, 5' e...    32   5.6    2
(EL365580) CCES1656.b1_P05.ab1 CCE(LMS) endive Cichorium end...    32   5.7    2
(CU051895) Equus caballus GSS, BAC clone CH241-152P3, T7 end...    32   5.7    2
(GH619137) FCCCVU2004B10.b0 Developing seeds (10 days after ...    30   5.7    2
(CX950331) UMC-bcl_0B02-024-a09 Corpus Luteum (CL) bcl Bos t...    40   5.8    2
(DY887010) CeleSEQ2871 Cunninghamella elegans pBluescript (E...    34   6.1    2
(DR887652) JGI_CUNH662.rev NIH_XGC_tropMet2 Xenopus (Siluran...    40   6.2    2
(FD962936) RR1G933TF RR1(CS) Raphanus raphanistrum subsp. ma...    34   6.4    3
(DY888876) CeleSEQ6260 Cunninghamella elegans pBluescript (E...    34   6.8    2
(AB137430) Homo sapiens DNA, STS on chromosome 16, D16S0175i...    30   7.6    3
(DJ469508) Method for analysing genome using microsatellite ...    30   7.6    3
(CQ722194) Sequence 8128 from Patent WO02068579.                   34   7.7    2
(AZ753057) RPCI-24-85C3.TVB RPCI-24 Mus musculus genomic clo...    30   7.8    3
(AC161373) Mus musculus BAC clone RP23-308E4 from chromosome...    42   8.6    1
(AC158986) Mus musculus BAC clone RP23-284L2 from chromosome...    42   8.6    1
(AC137871) Mus musculus chromosome 15, clone RP23-41B9, comp...    42   8.6    1
(AC131326) Mus musculus chromosome 17, clone RP23-454P14, co...    42   8.6    1
(AC115911) Mus musculus chromosome 6, clone RP24-481I20, com...    42   8.6    1
(AC190424) Pan troglodytes BAC clone CH251-258A7 from chromo...    42   8.6    1
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ...    42   8.6    1
(AP010542) Lotus japonicus genomic DNA, chromosome 1, clone:...    42   8.6    1
(AC186736) Glycine max clone gmp1-63m15, complete sequence.        42   8.6    1
(AR545373) Sequence 504 from patent US 6747137.                    42   8.6    1
(AR507969) Sequence 12929 from patent US 6703491.                  42   8.6    1
(AC091506) Sus scrofa clone RP44-348C20, complete sequence.        42   8.6    1
(AY060838) Drosophila melanogaster GM01994 full length cDNA.       42   8.6    1
(AC012373) Drosophila melanogaster, chromosome X, region 17B...    42   8.6    1
(AC233280) Homo sapiens BAC clone RP11-141C7 from chromosome...    42   8.6    1
(AC069513) Homo sapiens 3 BAC RP11-171N2 (Roswell Park Cance...    42   8.6    1
(AC145762) Sus scrofa clone RP44-77E6, WORKING DRAFT SEQUENC...    42   8.6    1
(AC131517) Rattus norvegicus clone CH230-2B9, WORKING DRAFT ...    42   8.6    1
(AC131348) Rattus norvegicus clone CH230-7G14, *** SEQUENCIN...    42   8.6    1
(AC127880) Rattus norvegicus clone CH230-50O8, *** SEQUENCIN...    42   8.6    1
(AC126865) Rattus norvegicus clone CH230-40B4, *** SEQUENCIN...    42   8.6    1
(AC112775) Homo sapiens chromosome 3 clone RP11-436M6, *** S...    42   8.6    1
(AC109128) Homo sapiens chromosome 3 clone RP11-423B7, WORKI...    42   8.6    1
(AC100589) Mus musculus clone RP23-156M20, LOW-PASS SEQUENCE...    42   8.6    1
(AC098061) Rattus norvegicus clone CH230-115G17, WORKING DRA...    42   8.6    1
(AC094931) Rattus norvegicus clone CH230-6D18, WORKING DRAFT...    42   8.6    1
(AC094852) Rattus norvegicus clone CH230-6A13, *** SEQUENCIN...    42   8.6    1
(CU855597) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    42   8.6    1
(AC090609) Homo sapiens chromosome 17 clone RP11-164K15 map ...    42   8.6    1
(AC084411) Mus musculus clone RP23-125M20, WORKING DRAFT SEQ...    42   8.6    1
(AC079636) Mus musculus clone RP23-16H9, WORKING DRAFT SEQUE...    42   8.6    1
(AC232270) Homo sapiens chromosome 3 clone RP11-697E15, WORK...    42   8.6    1
(AC232269) Homo sapiens chromosome 3 clone RP11-1401K23, WOR...    42   8.6    1
(AC201524) Strongylocentrotus purpuratus clone R3-3090A18, W...    42   8.6    1
(AC194996) Cavia porcellus clone CH234-216A14, WORKING DRAFT...    42   8.6    1
(AC189812) Cavia porcellus clone CH234-405E2, WORKING DRAFT ...    42   8.6    1
(AC179324) Strongylocentrotus purpuratus clone R3-1102N7, WO...    42   8.6    1
(AC176967) Strongylocentrotus purpuratus clone R3-34M18, WOR...    42   8.6    1
(AC015215) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    42   8.6    1
(BH306340) CH230-192L8.TV CHORI-230 Segment 1 Rattus norvegi...    42   8.6    1
(AZ986572) 2M0268O16R Mouse 10kb plasmid UUGC2M library Mus ...    42   8.6    1
(AY409723) Pan troglodytes GTF2A1 gene, VIRTUAL TRANSCRIPT, ...    42   8.6    1
(ED648381) GM_WBa0064P14.f GM_WBa Glycine max genomic clone ...    42   8.6    1
(ED363663) AUAC-aab60e02.b1 Ascaris suum whole genome shotgu...    42   8.6    1
(AG708501) Macaca fuscata fuscata DNA, clone: MSB2-151O06_R,...    42   8.6    1
(EH016551) USDA-FP_189040 Lysiphlebus testaceipes adult whol...    42   8.6    1
(EH010578) USDA-FP_183663 Lysiphlebus testaceipes adult whol...    42   8.6    1
(EC766782) EST 3278 Guarana fruits cDNA library Paullinia cu...    42   8.6    1
(EC200986) 316653 CK01 Drosophila melanogaster cDNA clone 69...    42   8.6    1
(EC075420) 328773 CK01 Drosophila melanogaster cDNA clone 76...    42   8.6    1
(DY875969) AresSEQ3310 Amorphotheca resinae pBluescript (Eco...    42   8.6    1
(DY673363) STRAI48JX cold-stressed Fragaria vesca seedlings ...    42   8.6    1
(DW494747) GH_RMIRS_104_A03_F Cotton Normalized Library rand...    42   8.6    1
(DW479053) GH_RMIRS_017_E12_088_F Cotton Normalized Library ...    42   8.6    1
(DW478874) GH_RMIRS_016_E12_R Cotton Normalized Library rand...    42   8.6    1
(DR460359) CM086A06 Cotton Lambda Zap Express Library Gossyp...    42   8.6    1
(DK430278) Drosophila simulans mRNA, adult full-length cDNA ...    42   8.6    1
(DK383049) Drosophila simulans mRNA, third instar larvae ful...    42   8.6    1
(AM732331) Cucumis melo subsp. melo EST, clone CI_55-E08-M13R.     42   8.6    1
(AM718363) Cucumis melo subsp. melo EST, clone PS_26-B03-M13R.     42   8.6    1
(AM717459) Cucumis melo subsp. melo EST, clone PS_30-A06-M13R.     42   8.6    1
(CV004165) csa01-3ms3-e02 Csa01 Cucumis sativus cDNA clone c...    42   8.6    1
(CO998403) csa01-3ms2-e02 Csa01 Cucumis sativus cDNA clone c...    42   8.6    1
(AL669097) Ciona intestinalis; larval mRNA; EST 5PRIM end of...    42   8.6    1
(CO325551) EK196756.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr...    42   8.6    1
(CO118229) GR__Eb020H17.r GR__Eb Gossypium raimondii cDNA cl...    42   8.6    1
(CO114953) GR__Eb016G10.r GR__Eb Gossypium raimondii cDNA cl...    42   8.6    1
(CO098643) GR__Ea23B04.r GR__Ea Gossypium raimondii cDNA clo...    42   8.6    1
(CO098641) GR__Ea23B03.r GR__Ea Gossypium raimondii cDNA clo...    42   8.6    1
(CO096671) GR__Ea20B08.r GR__Ea Gossypium raimondii cDNA clo...    42   8.6    1
(CO093658) GR__Ea15F21.r GR__Ea Gossypium raimondii cDNA clo...    42   8.6    1
(CO089160) GR__Ea08I08.f GR__Ea Gossypium raimondii cDNA clo...    42   8.6    1
(CO086781) GR__Ea04P03.f GR__Ea Gossypium raimondii cDNA clo...    42   8.6    1
(CO085460) GR__Ea02K04.f GR__Ea Gossypium raimondii cDNA clo...    42   8.6    1
(CO081418) GR__Ea45H19.r GR__Ea Gossypium raimondii cDNA clo...    42   8.6    1
(CO078103) GR__Ea40D09.r GR__Ea Gossypium raimondii cDNA clo...    42   8.6    1
(CO077950) GR__Ea39P16.r GR__Ea Gossypium raimondii cDNA clo...    42   8.6    1
(CO075600) GR__Ea36G20.r GR__Ea Gossypium raimondii cDNA clo...    42   8.6    1
(CO069569) GR__Ea26D10.r GR__Ea Gossypium raimondii cDNA clo...    42   8.6    1
(CN241577) EST007444 Mycelium and yeast cells from Paracocci...    42   8.6    1
(BU692800) JM01045H02 JM01 Ipomoea batatas cDNA, mRNA sequence.    42   8.6    1
(BM307237) sak38e09.y1 Gm-c1075 Glycine max cDNA clone SOYBE...    42   8.6    1
(BI470273) sah89h07.y1 Gm-c1050 Glycine max cDNA clone GENOM...    42   8.6    1
(BF854403) MR2-EN0092-261200-004-b04 EN0092 Homo sapiens cDN...    42   8.6    1
(BF009220) ss75e09.y1 Gm-c1062 Glycine max cDNA clone GENOME...    42   8.6    1
(GE131489) 454GmaGlobSeed874137 Soybean Seeds Containing Glo...    42   8.6    1
(GE129390) 454GmaGlobSeed872038 Soybean Seeds Containing Glo...    42   8.6    1
(GE126404) 454GmaGlobSeed869052 Soybean Seeds Containing Glo...    42   8.6    1
(GE096214) 454GmaGlobSeed838862 Soybean Seeds Containing Glo...    42   8.6    1
(GE080274) 454GmaGlobSeed822922 Soybean Seeds Containing Glo...    42   8.6    1
(GE075584) 454GmaGlobSeed818232 Soybean Seeds Containing Glo...    42   8.6    1
(GE023498) 454GmaGlobSeed766146 Soybean Seeds Containing Glo...    42   8.6    1
(GD989311) 454GmaGlobSeed731960 Soybean Seeds Containing Glo...    42   8.6    1
(GD977150) 454GmaGlobSeed719799 Soybean Seeds Containing Glo...    42   8.6    1
(GD929570) 454GmaGlobSeed672219 Soybean Seeds Containing Glo...    42   8.6    1
(GD925481) 454GmaGlobSeed668130 Soybean Seeds Containing Glo...    42   8.6    1
(GD906659) 454GmaGlobSeed649308 Soybean Seeds Containing Glo...    42   8.6    1
(GD866290) 454GmaGlobSeed608939 Soybean Seeds Containing Glo...    42   8.6    1
(GD858001) 454GmaGlobSeed600650 Soybean Seeds Containing Glo...    42   8.6    1
(GD840122) 454GmaGlobSeed582771 Soybean Seeds Containing Glo...    42   8.6    1
(GD831510) 454GmaGlobSeed574159 Soybean Seeds Containing Glo...    42   8.6    1
(GD802498) 454GmaGlobSeed545147 Soybean Seeds Containing Glo...    42   8.6    1
(GD776243) 454GmaGlobSeed518892 Soybean Seeds Containing Glo...    42   8.6    1
(GD749397) 454GmaGlobSeed492046 Soybean Seeds Containing Glo...    42   8.6    1
(GD735417) 454GmaGlobSeed478066 Soybean Seeds Containing Glo...    42   8.6    1
(GD731288) 454GmaGlobSeed473937 Soybean Seeds Containing Glo...    42   8.6    1
(FK886001) EST_crog_evp_899817 crog_evp Caligus rogercressey...    42   8.6    1
(FK594190) 454GmaGlobSeed328822 Soybean Seeds Containing Glo...    42   8.6    1
(FK584853) 454GmaGlobSeed319485 Soybean Seeds Containing Glo...    42   8.6    1
(FK560068) 454GmaGlobSeed294700 Soybean Seeds Containing Glo...    42   8.6    1
(FK514057) 454GmaGlobSeed248689 Soybean Seeds Containing Glo...    42   8.6    1
(FK475637) 454GmaGlobSeed210269 Soybean Seeds Containing Glo...    42   8.6    1
(FK462454) 454GmaGlobSeed197086 Soybean Seeds Containing Glo...    42   8.6    1
(FK423915) 454GmaGlobSeed158547 Soybean Seeds Containing Glo...    42   8.6    1
(FK422808) 454GmaGlobSeed157440 Soybean Seeds Containing Glo...    42   8.6    1
(FK389572) 454GmaGlobSeed124204 Soybean Seeds Containing Glo...    42   8.6    1
(FK341988) 454GmaGlobSeed76620 Soybean Seeds Containing Glob...    42   8.6    1
(FK338236) 454GmaGlobSeed72868 Soybean Seeds Containing Glob...    42   8.6    1
(FK319792) 454GmaGlobSeed54424 Soybean Seeds Containing Glob...    42   8.6    1
(FK279271) 454GmaGlobSeed13903 Soybean Seeds Containing Glob...    42   8.6    1
(EY198097) BC_011_96 Cotton ovule and fiber 3-5 days post an...    42   8.6    1
(EY197161) UFL_185_H06 Cotton ovule and fiber 3-5 days post ...    42   8.6    1
(EX676021) JS5AP34JG Draught stressed Fragaria vesca (strain...    42   8.6    1
(EX164421) H04_P2_032 Cotton 1-14 day post anthesis Lambda Z...    42   8.6    1
(ES823898) UFL_382_25 Cotton fiber 0-10 day post anthesis Go...    42   8.6    1
(Z99111) Bacillus subtilis complete genome (section 8 of 21)...    42   8.6    1
(Z68230) B.subtilis yllA, yllB, yllC, ftsL, pbpB and spoVD g...    42   8.6    1
(CP000077) Sulfolobus acidocaldarius DSM 639, complete genome.     42   8.6    1
(AC114261) Dictyostelium discoideum chromosome 2 map 126059-...    36   9.8    3

>(AU060408) Dictyostelium discoideum slug cDNA, clone SLJ640.
          Length = 230

 Score =  359 bits (181), Expect = 3e-95
 Identities = 184/184 (100%)
 Strand = Plus / Plus


Query: 1   atttcagagaacggtttattagagtcaccaacatcaccaataagaacatcatcaacccca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atttcagagaacggtttattagagtcaccaacatcaccaataagaacatcatcaacccca 60


Query: 61  acaacaccaacatcaccaccatttatancatcaccaccatttataacatcgccaaaaggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  acaacaccaacatcaccaccatttatancatcaccaccatttataacatcgccaaaaggt 120


Query: 121 ttaaattcaccaagaagattagttggtttcttttcaaaatcaacatcctatcaatcatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttaaattcaccaagaagattagttggtttcttttcaaaatcaacatcctatcaatcatta 180


Query: 181 ttgg 184
           ||||
Sbjct: 181 ttgg 184

 Score = 38.2 bits (19), Expect(2) = 0.11
 Identities = 21/22 (95%)
 Strand = Plus / Plus


Query: 89  catcaccaccatttataacatc 110
           ||||||||||||||||| ||||
Sbjct: 71  catcaccaccatttatancatc 92

 Score = 38.2 bits (19), Expect(2) = 0.11
 Identities = 21/22 (95%)
 Strand = Plus / Plus


Query: 71  catcaccaccatttatancatc 92
           ||||||||||||||||| ||||
Sbjct: 89  catcaccaccatttataacatc 110

 Score = 28.2 bits (14), Expect(2) = 0.11
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 65 caccaacatcacca 78
          ||||||||||||||
Sbjct: 26 caccaacatcacca 39

 Score = 28.2 bits (14), Expect(2) = 0.11
 Identities = 14/14 (100%)
 Strand = Plus / Plus


Query: 26 caccaacatcacca 39
          ||||||||||||||
Sbjct: 65 caccaacatcacca 78

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 236,509,391
Number of extensions: 14176672
Number of successful extensions: 3971443
Number of sequences better than 10.0: 344
Length of query: 229
Length of database: 101,790,757,118
Length adjustment: 23
Effective length of query: 206
Effective length of database: 99,442,330,388
Effective search space: 20485120059928
Effective search space used: 20485120059928
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
protein update 2009. 7.16
Homology vs Protein 
Query= Contig-U01437-1 (Contig-U01437-1Q) /CSM_Contig/Contig-U01437-1Q.Seq.d
         (229 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

 ***** No hits found ******

Lambda     K      H
   0.314    0.132    0.351

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 156,390,117
Number of extensions: 1107315
Number of successful extensions: 1391
Number of sequences better than 10.0: 0
Number of HSP's gapped: 1391
Number of HSP's successfully gapped: 0
Length of query: 76
Length of database: 1,051,180,864
Length adjustment: 47
Effective length of query: 29
Effective length of database: 899,062,591
Effective search space: 26072815139
Effective search space used: 26072815139
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 27 (15.0 bits)
PSORT 

 psg: 0.75  gvh: 0.43  alm: 0.54  top: 0.53  tms: 0.00  mit: 0.23  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 40.0 %: cytoplasmic
	 32.0 %: nuclear
	 12.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  4.0 %: vacuolar
	  4.0 %: endoplasmic reticulum

>> prediction for Contig-U01437-1 is cyt
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0