| Contig-U06860-1 |
| Contig ID |
Contig-U06860-1 |
| Contig update |
2001. 8.30 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
575 |
| Chromosome number (1..6, M) |
3 |
| Chromosome length |
6358359 |
| Start point |
3378185 |
| End point |
3377610 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
1 |
| Number of EST |
1 |
| Link to clone list |
U06860 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11.10 |
| Homology vs DNA |
Query= Contig-U06860-1 (Contig-U06860-1Q) /CSM_Contig/Contig-U06860-1Q.Seq.d
(575 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU267221) Dictyostelium discoideum vegetative cDNA clone:VS... 1017 0.0 1
(FE180251) LV_NC_RA22L20f Litopenaeus vannamei nerve cord cD... 44 4e-10 4
(EU669756) Gryllus firmus isolate COQ7_Eb ubiquinone biosynt... 44 9e-09 4
(EU669755) Gryllus firmus isolate COQ7_Ea ubiquinone biosynt... 44 9e-09 4
(EU669754) Gryllus firmus isolate COQ7_Gd ubiquinone biosynt... 44 9e-09 4
(EU669753) Gryllus firmus isolate COQ7_Gc ubiquinone biosynt... 44 9e-09 4
(EU669752) Gryllus firmus isolate COQ7_Gb ubiquinone biosynt... 44 9e-09 4
(EU669751) Gryllus firmus isolate COQ7_Ga ubiquinone biosynt... 44 9e-09 4
(EU669750) Gryllus pennsylvanicus isolate COQ7_Sg ubiquinone... 44 9e-09 4
(EU669749) Gryllus pennsylvanicus isolate COQ7_Sf ubiquinone... 44 9e-09 4
(EU669748) Gryllus pennsylvanicus isolate COQ7_Se ubiquinone... 44 9e-09 4
(EU669747) Gryllus pennsylvanicus isolate COQ7_Sd ubiquinone... 44 9e-09 4
(EU669746) Gryllus pennsylvanicus isolate COQ7_Sc ubiquinone... 44 9e-09 4
(EU669745) Gryllus pennsylvanicus isolate COQ7_Sb ubiquinone... 44 9e-09 4
(EU669744) Gryllus pennsylvanicus isolate COQ7_Sa ubiquinone... 44 9e-09 4
(EU669743) Gryllus pennsylvanicus isolate COQ7_Id ubiquinone... 44 9e-09 4
(EU669742) Gryllus pennsylvanicus isolate COQ7_Ic ubiquinone... 44 9e-09 4
(EU669741) Gryllus pennsylvanicus isolate COQ7_Ib ubiquinone... 44 9e-09 4
(EU669740) Gryllus pennsylvanicus isolate COQ7_Ia ubiquinone... 44 9e-09 4
(EB410205) Gp_AcGl2_04A06_M13r AcGl2 Gryllus pennsylvanicus ... 44 2e-08 4
(EB410281) Gp_AcGl2_04H10_M13r AcGl2 Gryllus pennsylvanicus ... 44 4e-08 3
(EJ233898) 1092404077664 Global-Ocean-Sampling_GS-27-01-01-1... 66 1e-06 1
(CJ401207) Molgula tectiformis cDNA, gonad clone:mtgd014g14,... 66 1e-06 1
(CJ398093) Molgula tectiformis cDNA, gonad clone:mtgd002d02,... 66 1e-06 1
(CJ362570) Molgula tectiformis cDNA, cleaving embryo clone:m... 66 1e-06 1
(CJ352112) Molgula tectiformis cDNA, cleaving embryo clone:m... 66 1e-06 1
(EK403310) 1095469552476 Global-Ocean-Sampling_GS-31-01-01-1... 46 6e-05 2
(EJ498290) 1095403591070 Global-Ocean-Sampling_GS-28-01-01-1... 44 6e-05 2
(EJ896687) 1093018469475 Global-Ocean-Sampling_GS-30-02-01-1... 60 9e-05 1
(EJ627043) 1092963203377 Global-Ocean-Sampling_GS-29-01-01-1... 60 9e-05 1
(EJ602530) 1092961207114 Global-Ocean-Sampling_GS-29-01-01-1... 60 9e-05 1
(EJ288514) 1095370003209 Global-Ocean-Sampling_GS-27-01-01-1... 60 9e-05 1
(EK167499) 1095458059517 Global-Ocean-Sampling_GS-31-01-01-1... 38 3e-04 3
(EK213834) 1095460109463 Global-Ocean-Sampling_GS-31-01-01-1... 58 4e-04 1
(ER434736) 1092963793028 Global-Ocean-Sampling_GS-35-01-01-1... 52 9e-04 2
(EK426815) 1095516036651 Global-Ocean-Sampling_GS-31-01-01-1... 52 0.001 2
(EH641263) EST12371 LK04 Laupala kohalensis cDNA clone 10610... 38 0.001 3
(EW965398) BRHL_03_P10_T7 Headlice composite library with al... 42 0.001 2
(ER447237) 1092963835364 Global-Ocean-Sampling_GS-35-01-01-1... 50 0.001 2
(BI513926) BB160014A11G06.5 Bee Brain Normalized Library, BB... 34 0.002 3
(BI513892) BB160014A10G06.5 Bee Brain Normalized Library, BB... 34 0.002 3
(EW770626) ST020011B20B03 Normalized and subtracted western ... 34 0.002 3
(EW765276) ST020021A20D05 Normalized and subtracted western ... 34 0.002 3
(BI505888) BB170017A20H04.5 Bee Brain Normalized/Subtracted ... 34 0.003 3
(AY601644) Apis mellifera ligustica ubiquinone biosynthesis ... 34 0.003 3
(FF762456) XABT67756.rev Gateway compatible cien cDNA librar... 42 0.008 3
(DN303865) PL05004A2B02 cDNA from sexually mature hermaphodi... 48 0.009 2
(DN299281) PL04015B1C01 cDNA from sexually mature hermaphodi... 48 0.009 2
(DN292753) PL030011B20C06 cDNA from sexually mature hermapho... 48 0.010 2
(DN298116) PL04011B2A04 cDNA from sexually mature hermaphodi... 48 0.010 2
(FF762457) XABT67756.fwd Gateway compatible cien cDNA librar... 42 0.010 3
(EJ669805) 1092955054218 Global-Ocean-Sampling_GS-30-02-01-1... 42 0.012 3
(ER552509) 1093016255842 Global-Ocean-Sampling_GS-35-01-01-1... 42 0.019 3
(EK462025) 1095469396106 Global-Ocean-Sampling_GS-32-01-01-1... 52 0.022 1
(DW405109) ES-N-S02-0240-W Penaeus monodon Eyestalk cDNA lib... 36 0.084 3
(EJ613671) 1092963002046 Global-Ocean-Sampling_GS-29-01-01-1... 50 0.088 1
(EJ605451) 1092962003198 Global-Ocean-Sampling_GS-29-01-01-1... 50 0.088 1
(EJ468710) 1095403396042 Global-Ocean-Sampling_GS-28-01-01-1... 50 0.088 1
(EH216515) USDA-FP_179316 WHMH (pink hibiscus mealybug) Maco... 50 0.088 1
(EJ019174) 1095439025895 Global-Ocean-Sampling_GS-26-01-01-1... 44 0.21 2
(EK370061) 1095469413069 Global-Ocean-Sampling_GS-31-01-01-1... 36 0.26 2
(EW764645) ST020039A10F11 Normalized and subtracted western ... 34 0.26 2
(EW771340) ST020010B20C04 Normalized and subtracted western ... 34 0.26 2
(EW762667) ST020010B20G10 Normalized and subtracted western ... 34 0.26 2
(BW640103) Dugesia ryukyuensis mRNA, clone: Dr_sW_017_B18, 5... 34 0.27 3
(DH432771) Macropus eugenii DNA with T3 primer, fosmid clone... 48 0.35 1
(DH046730) Oryzias latipes Fosmid clone:GOLWFno44_b22, forwa... 48 0.35 1
(AV997957) Ciona intestinalis cDNA, clone:cicl24h01, 5' end,... 42 0.37 2
(CV222924) taj54f02.y1 Hydra EST UCI 6 Hydra magnipapillata ... 40 0.40 2
(BJ376599) Dictyostelium discoideum cDNA clone:ddc29o06, 3' ... 36 0.51 3
(BW402913) Ciona intestinalis cDNA, clone:ciem840n10, 3'end,... 42 0.55 2
(BW362421) Ciona intestinalis cDNA, clone:cima827c01, 5'end,... 42 0.56 2
(BW416826) Ciona intestinalis cDNA, clone:cima827c01, 3'end,... 42 0.56 2
(BW348885) Ciona intestinalis cDNA, clone:ciem840n10, 5'end,... 42 0.57 2
(BJ342069) Dictyostelium discoideum cDNA clone:dda9l10, 3' e... 36 0.58 3
(FF765608) XABT69790.rev Gateway compatible cien cDNA librar... 42 0.58 2
(FF862571) CBWU9281.g1 Yutaka Satou unpublished cDNA library... 42 0.58 2
(DY897859) SF9L03076 Spodoptera frugiperda cDNA Cell Line Li... 44 0.58 2
(BJ382776) Dictyostelium discoideum cDNA clone:ddc45h24, 3' ... 36 0.59 3
(FF765609) XABT69790.fwd Gateway compatible cien cDNA librar... 42 0.60 2
(BJ357507) Dictyostelium discoideum cDNA clone:dda63c23, 3' ... 36 0.66 3
(DY794725) pyes2-ct_028_h11.p1ca pYES2/CT Spodoptera frugipe... 44 0.73 2
(ER522844) 1093015599103 Global-Ocean-Sampling_GS-35-01-01-1... 42 0.76 2
(EJ362012) 1092963690795 Global-Ocean-Sampling_GS-28-01-01-1... 34 0.88 3
(EY122119) 1002G23 Heliothis virescens hemocyte Library Heli... 34 0.97 2
(AM462020) Vitis vinifera contig VV78X154104.6, whole genome... 40 1.2 2
(AC198910) Xenopus tropicalis clone CH216-27N1, complete seq... 46 1.4 1
(AC154097) Mus musculus chromosome 18, clone RP23-337F6, com... 46 1.4 1
(AC120855) Mus musculus chromosome 18, clone RP23-270P23, co... 46 1.4 1
(AC152013) Otolemur garnettii clone CH256-393J20, WORKING DR... 46 1.4 1
(FC860216) CAMPEP103A09 CAMPE Biomphalaria glabrata cDNA clo... 46 1.4 1
(FF853266) CBWU4026.b1 Yutaka Satou unpublished cDNA library... 42 1.7 2
(EJ442490) 1093015310467 Global-Ocean-Sampling_GS-28-01-01-1... 40 2.5 2
(AZ688963) ENTLC88TR Entamoeba histolytica Sheared DNA Entam... 34 2.7 2
(EJ466558) 1095403304252 Global-Ocean-Sampling_GS-28-01-01-1... 40 2.7 2
(CZ539164) SRAA-aad24a09.b1 Strongyloides ratti whole genome... 42 2.8 2
(EJ286573) 1095368023357 Global-Ocean-Sampling_GS-27-01-01-1... 30 2.8 3
(ER627025) 1093018276151 Global-Ocean-Sampling_GS-36-01-01-2... 40 2.8 2
(EK219337) 1095460135467 Global-Ocean-Sampling_GS-31-01-01-1... 36 2.8 2
(EJ347332) 1092963556849 Global-Ocean-Sampling_GS-28-01-01-1... 40 3.1 2
>(AU267221) Dictyostelium discoideum vegetative cDNA clone:VSH296,
3' end single read.
Length = 576
Score = 1017 bits (513), Expect = 0.0
Identities = 513/513 (100%)
Strand = Plus / Plus
Query: 1 agacaaatcattgaaagaataattcgtgtagaccatgcaggtgaatttggagcagcaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agacaaatcattgaaagaataattcgtgtagaccatgcaggtgaatttggagcagcaaga 60
Query: 61 atctatgaaggtcaattagcagtgttggcaaatacaaaagaaggaccattaattagagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctatgaaggtcaattagcagtgttggcaaatacaaaagaaggaccattaattagagag 120
Query: 121 atggcagatcaagagaaagaacatcaagcaaaattcaatcaattaatctatgaaaaacgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atggcagatcaagagaaagaacatcaagcaaaattcaatcaattaatctatgaaaaacgt 180
Query: 181 gttagaccaacaattttatcaccaatttggaatgttgcaggatttgggttaggttatgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttagaccaacaattttatcaccaatttggaatgttgcaggatttgggttaggttatgta 240
Query: 241 tcagcattaatgggtaaagaagcagcaatggcagtcactgtcgccgttgaaaccgttatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcagcattaatgggtaaagaagcagcaatggcagtcactgtcgccgttgaaaccgttatc 300
Query: 301 tctgatcattacaatgaccaattaagacaattaaacgatgccggtattgatgataaagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctgatcattacaatgaccaattaagacaattaaacgatgccggtattgatgataaagaa 360
Query: 361 ttaaaagaaacaattaaaaagtttagagatgacgaacttgaacatatgcacattggtatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttaaaagaaacaattaaaaagtttagagatgacgaacttgaacatatgcacattggtatc 420
Query: 421 gaacacgatgctgaattagcaccactctataaaccattttcagaacttgtcaaagttggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaacacgatgctgaattagcaccactctataaaccattttcagaacttgtcaaagttggt 480
Query: 481 acaaaaactgcaatttggttatcaacaagagtt 513
|||||||||||||||||||||||||||||||||
Sbjct: 481 acaaaaactgcaatttggttatcaacaagagtt 513
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 579,846,034
Number of extensions: 32760955
Number of successful extensions: 2624433
Number of sequences better than 10.0: 164
Length of query: 575
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 552
Effective length of database: 93,106,754,628
Effective search space: 51394928554656
Effective search space used: 51394928554656
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.23 |
| Homology vs Protein |
Query= Contig-U06860-1 (Contig-U06860-1Q) /CSM_Contig/Contig-U06860-1Q.Seq.d
(575 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
(Q54VB3) RecName: Full=Ubiquinone biosynthesis protein COQ7 homo... 313 2e-84
AM393051_1(AM393051|pid:none) Synthetic construct Homo sapiens c... 176 4e-43
(Q99807) RecName: Full=Ubiquinone biosynthesis protein COQ7 homo... 176 5e-43
(Q63619) RecName: Full=Ubiquinone biosynthesis protein COQ7 homo... 176 5e-43
AJ252202_1(AJ252202|pid:none) Drosophila melanogaster D-COQ7 gen... 175 7e-43
(P97478) RecName: Full=Ubiquinone biosynthesis protein COQ7 homo... 174 2e-42
CR762257_1(CR762257|pid:none) Xenopus tropicalis finished cDNA, ... 173 3e-42
AF032900_1(AF032900|pid:none) Homo sapiens timing protein CLK-1 ... 172 4e-42
AL136647_1(AL136647|pid:none) Homo sapiens mRNA; cDNA DKFZp564C1... 172 4e-42
BT076506_1(BT076506|pid:none) Caligus rogercresseyi clone crog-e... 168 8e-41
AY815669_1(AY815669|pid:none) Schistosoma japonicum SJCHGC09044 ... 167 1e-40
EU669740_1(EU669740|pid:none) Gryllus pennsylvanicus isolate COQ... 166 3e-40
EU669745_1(EU669745|pid:none) Gryllus pennsylvanicus isolate COQ... 166 3e-40
BT073600_1(BT073600|pid:none) Oncorhynchus mykiss clone omyk-evn... 164 1e-39
CP000613_4033(CP000613|pid:none) Rhodospirillum centenum SW, com... 158 9e-38
CU459003_1885(CU459003|pid:none) Magnetospirillum gryphiswaldens... 157 1e-37
AK158380_1(AK158380|pid:none) Mus musculus adult inner ear cDNA,... 156 4e-37
AP007255_1532(AP007255|pid:none) Magnetospirillum magneticum AMB... 155 7e-37
S71353(S71353)Coq7 protein homolog - rat 149 5e-35
CP000697_152(CP000697|pid:none) Acidiphilium cryptum JF-5, compl... 143 4e-33
AE017196_986(AE017196|pid:none) Wolbachia endosymbiont of Drosop... 143 4e-33
CP000157_2651(CP000157|pid:none) Erythrobacter litoralis HTCC259... 141 1e-32
CP000230_3487(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 140 3e-32
(P48376) RecName: Full=Ubiquinone biosynthesis protein COQ7 homo... 134 1e-30
(O74826) RecName: Full=Ubiquinone biosynthesis protein coq7; Alt... 132 9e-30
CP000699_2535(CP000699|pid:none) Sphingomonas wittichii RW1, com... 130 2e-29
CP000030_240(CP000030|pid:none) Anaplasma marginale str. St. Mar... 130 3e-29
AE016816_44(AE016816|pid:none) Ashbya gossypii (= Eremothecium g... 128 1e-28
CR382137_641(CR382137|pid:none) Debaryomyces hansenii strain CBS... 127 2e-28
CP000248_53(CP000248|pid:none) Novosphingobium aromaticivorans D... 126 5e-28
FN392319_473(FN392319|pid:none) Pichia pastoris GS115 chromosome... 125 1e-27
CR382125_100(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 123 3e-27
CR380957_438(CR380957|pid:none) Candida glabrata strain CBS138 c... 123 4e-27
CR925677_220(CR925677|pid:none) Ehrlichia ruminantium str. Garde... 122 7e-27
FM992692_104(FM992692|pid:none) Candida dubliniensis CD36 chromo... 121 1e-26
CR767821_232(CR767821|pid:none) Ehrlichia ruminantium strain Wel... 121 2e-26
CU633455_84(CU633455|pid:none) Podospora anserina genomic DNA ch... 120 3e-26
CP000449_2344(CP000449|pid:none) Maricaulis maris MCS10, complet... 120 3e-26
CP000501_210(CP000501|pid:none) Pichia stipitis CBS 6054 chromos... 119 4e-26
CP000107_223(CP000107|pid:none) Ehrlichia canis str. Jake, compl... 119 8e-26
CP000084_416(CP000084|pid:none) Candidatus Pelagibacter ubique H... 118 1e-25
(P41735) RecName: Full=Catabolite repression protein CAT5; AltNa... 117 2e-25
CP000087_1105(CP000087|pid:none) Rickettsia bellii RML369-C, com... 116 5e-25
BC028276_1(BC028276|pid:none) Mus musculus demethyl-Q 7, mRNA (c... 115 6e-25
CU928179_59(CU928179|pid:none) Zygosaccharomyces rouxii strain C... 115 1e-24
CP000236_833(CP000236|pid:none) Ehrlichia chaffeensis str. Arkan... 114 1e-24
CP001612_204(CP001612|pid:none) Rickettsia africae ESF-5, comple... 112 5e-24
AE005673_2180(AE005673|pid:none) Caulobacter crescentus CB15, co... 111 2e-23
CP001340_2278(CP001340|pid:none) Caulobacter crescentus NA1000, ... 111 2e-23
AP007171_392(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 109 6e-23
CP000237_325(CP000237|pid:none) Neorickettsia sennetsu strain Mi... 109 6e-23
AM920435_504(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 108 8e-23
A71730(A71730) ubiquinone biosynthesis protein coq7 (coq7) RP190... 108 1e-22
CP000847_253(CP000847|pid:none) Rickettsia akari str. Hartford, ... 107 2e-22
CP000927_3187(CP000927|pid:none) Caulobacter sp. K31, complete g... 103 3e-21
AE017197_174(AE017197|pid:none) Rickettsia typhi str. Wilmington... 102 7e-21
AM494475_144(AM494475|pid:none) Orientia tsutsugamushi Boryong c... 100 4e-20
AP008981_1342(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 99 6e-20
CP001079_235(CP001079|pid:none) Anaplasma marginale str. Florida... 97 3e-19
AC091483_34(AC091483|pid:none) Trypanosoma brucei chromosome 3 c... 97 4e-19
AM494966_232(AM494966|pid:none) Leishmania braziliensis chromoso... 96 7e-19
CP000080_242(CP000080|pid:none) Leishmania major strain Friedlin... 95 1e-18
U81277_1(U81277|pid:none) Mus musculus COQ7 mRNA, partial cds. 91 2e-17
CP000155_5197(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 84 2e-15
(Q7NSP9) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 74 4e-12
CP001132_2763(CP001132|pid:none) Acidithiobacillus ferrooxidans ... 72 1e-11
(Q47IC7) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 70 4e-11
CP001074_2670(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 69 7e-11
(Q3SGX7) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 67 3e-10
(Q5X963) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 63 5e-09
(B0TZT4) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 63 5e-09
AE017354_28(AE017354|pid:none) Legionella pneumophila subsp. pne... 63 5e-09
(A5I9H9) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 63 5e-09
(Q5X0J0) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 63 5e-09
(Q6F9T3) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 61 2e-08
(Q82U40) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 61 2e-08
CP000103_340(CP000103|pid:none) Nitrosospira multiformis ATCC 25... 61 2e-08
CP001068_3055(CP001068|pid:none) Ralstonia pickettii 12J chromos... 61 2e-08
CP001339_2761(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, ... 60 3e-08
U81276_1(U81276|pid:none) Human CLK-1 mRNA, partial cds. 60 4e-08
(Q5P7T5) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 60 4e-08
(Q13TY2) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 60 4e-08
CP001154_1364(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 60 4e-08
(Q0AIU7) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 60 4e-08
(Q0BM15) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 60 5e-08
(A4IY33) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 60 5e-08
(Q8XVH7) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 60 5e-08
CU694389_62(CU694389|pid:none) Ralstonia solanacearum strain Mol... 60 5e-08
CU633749_2678(CU633749|pid:none) Cupriavidus taiwanensis str. LM... 59 9e-08
(Q0K6L4) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 59 1e-07
(Q4FRJ8) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 59 1e-07
(Q2NYE2) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 58 2e-07
(A1VJY7) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 58 2e-07
AE013598_4066(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K... 58 2e-07
(Q4K507) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 58 2e-07
(Q02TB1) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 58 2e-07
(A6SUN5) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 58 2e-07
(B0KK40) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 58 2e-07
(Q3K5V9) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 57 4e-07
CP000086_1096(CP000086|pid:none) Burkholderia thailandensis E264... 56 6e-07
(Q8PQ42) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 56 8e-07
(Q3BYB0) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 56 8e-07
CP001392_651(CP001392|pid:none) Diaphorobacter sp. TPSY, complet... 56 8e-07
(Q4UZF3) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 56 8e-07
(A1W3V1) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 56 8e-07
CP001111_3706(CP001111|pid:none) Stenotrophomonas maltophilia R5... 55 2e-06
AM181176_5436(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 55 2e-06
(Q0BIL1) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 55 2e-06
(Q12FJ1) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 55 2e-06
(A1V0S8) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 55 2e-06
AP009385_384(AP009385|pid:none) Burkholderia multivorans ATCC 17... 54 2e-06
(A3NZM5) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 54 2e-06
CP000941_809(CP000941|pid:none) Xylella fastidiosa M12, complete... 54 4e-06
CP001103_1763(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 54 4e-06
(A9NAW1) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 53 5e-06
CP001020_157(CP001020|pid:none) Coxiella burnetii CbuK_Q154, com... 53 5e-06
CP001019_227(CP001019|pid:none) Coxiella burnetii CbuG_Q212, com... 53 5e-06
CP001052_3417(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 53 5e-06
(Q87DD2) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 53 7e-06
AE009442_714(AE009442|pid:none) Xylella fastidiosa Temecula1, co... 53 7e-06
(Q48NP2) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 53 7e-06
(Q39JY0) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 53 7e-06
CP001011_771(CP001011|pid:none) Xylella fastidiosa M23, complete... 53 7e-06
(A4JB84) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 53 7e-06
(Q889Z8) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 52 9e-06
CP000934_2593(CP000934|pid:none) Cellvibrio japonicus Ueda107, c... 52 1e-05
(A0K476) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 52 1e-05
(Q4ZML8) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 52 1e-05
(A4G1T0) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 51 3e-05
(Q0VMY0) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 50 4e-05
(A6VZM4) RecName: Full=2-nonaprenyl-3-methyl-6-methoxy-1,4-benzo... 45 0.001
FM866751_1(FM866751|pid:none) Uncultured bacterium ORF1 for puta... 42 0.015
FM866786_1(FM866786|pid:none) Uncultured bacterium ORF1 for puta... 40 0.058
CP000613_2902(CP000613|pid:none) Rhodospirillum centenum SW, com... 37 0.29
GM015171_131(GM015171|pid:none) Sequence 1 from Patent EP1923464. 36 0.84
AP006878_825(AP006878|pid:none) Thermococcus kodakarensis KOD1 D... 36 0.84
CP000562_1144(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 34 2.5
AM270070_26(AM270070|pid:none) Aspergillus niger contig An04c009... 33 5.5
>(Q54VB3) RecName: Full=Ubiquinone biosynthesis protein COQ7
homolog; AltName: Full=Coenzyme Q biosynthesis protein 7
homolog;
Length = 217
Score = 313 bits (802), Expect = 2e-84
Identities = 158/171 (92%), Positives = 158/171 (92%)
Frame = +1
Query: 1 RQIIERIIRVDHAGEFGAARIYEGQLAVLANTKEGPLIREMADQEKEHQAKFNQLIYEKR 180
RQIIERIIRVDHAGEFGAARIYEGQLAVLANTKEGPLIREMADQEKEHQAKFNQLIYEKR
Sbjct: 47 RQIIERIIRVDHAGEFGAARIYEGQLAVLANTKEGPLIREMADQEKEHQAKFNQLIYEKR 106
Query: 181 VRPTILSPIWNVAGFGLGYVSALMGKXXXXXXXXXXXXXISDHYNDQLRQLNDAGIDDKE 360
VRPTILSPIWNVAGFGLGYVSALMGK ISDHYNDQLRQLNDAGIDDKE
Sbjct: 107 VRPTILSPIWNVAGFGLGYVSALMGKEAAMAVTVAVETVISDHYNDQLRQLNDAGIDDKE 166
Query: 361 LKETIKKFRDDELEHMHIGIEHDAELAPLYKPFSELVKVGTKTAIWLSTRV 513
LKETIKKFRDDELEHMHIGIEHDAELAPLYKPFSELVKVGTKTAIWLSTRV
Sbjct: 167 LKETIKKFRDDELEHMHIGIEHDAELAPLYKPFSELVKVGTKTAIWLSTRV 217
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 733,652,152
Number of extensions: 11546809
Number of successful extensions: 29068
Number of sequences better than 10.0: 138
Number of HSP's gapped: 28967
Number of HSP's successfully gapped: 138
Length of query: 191
Length of database: 1,040,966,779
Length adjustment: 121
Effective length of query: 70
Effective length of database: 653,248,294
Effective search space: 45727380580
Effective search space used: 45727380580
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
|
| PSORT |
|
| VS (DIR, S) |
1 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |