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Dicty_cDB
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U06827-1
Contig ID Contig-U06827-1
Contig update 2001. 8.30
Contig sequence 
>Contig-U06827-1 (Contig-U06827-1Q) /CSM_Contig/Contig-U06827-1Q.Seq.d
ACAATTTCCAAAGGATAATATTTTTTTGGAAATAAAAGAAGAAGAAAAAG
AAGAAATAAATAATAATTTAAATTATTATTTTAAGTCAATGGAAGTGCGA
CCAAGTGATAAAGAATTTTTCAACTATGATTGGTTTAGTTTTTTTAATGA
AAATTCTTTAAACTTATCCATAATTTTTAATGGAAAAAAAAAAGAAAAAA
ATGAAGATGGTGGTGATGGTAGTGGTGGTAGCGTTAGTGTTAGTGTTAGT
GTTAGTGATGNAAGATGATGAAAATAATAAAATNCTATTAAGTAAAACCG
TTAAAAAATCTAAAAAATCAGGTAAATTTAAAACTATAAATTTTACAGCT
GATATTTTTAAATTAAAACAAAATGAAGCCGCCAAATCATTAAATATATC
AACTTCTTGTNTAAATAGATTATTAAAAGAAGAAATCACTAGAATCCCTT
CCTTGCGTGAAATATATTTTAAACCTGGAAAACGTC
Gap no gap
Contig length 486
Chromosome number (1..6, M) 6
Chromosome length 3595308
Start point 1129667
End point 1130153
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U06827
List of clone(s) 

est1=VSG845F,1,487
Translated Amino Acid sequence 
nfqriiffwk*kkkkkkk*iii*iiilsqwkcdqviknfstmiglvflmkil*typ*FLM
EKKKKKMKMVVMVVVVALVLVLVLVMXDDENNKXLLSKTVKKSKKSGKFKTINFTADIFK
LKQNEAAKSLNISTSCXNRLLKEEITRIPSLREIYFKPGKR
Translated Amino Acid sequence (All Frames) 
Frame A:
tiskg*yffgnkrrrkrrnk**fkllf*vngsatk**rifql*lv*ff**kffklihnf*
wkkkrkk*rww*w*ww*r*c*c*c**xkmmkiikxy*vkplknlknqvnlkl*ilqlifl
n*nkmkppnh*iyqllv*idy*kkksleslpcvkyilnlenv


Frame B:
qfpkdnifleikeeekeeinnnlnyyfksmevrpsdkeffnydwfsffnenslnlsiifn
gkkkeknedggdgsggsvsvsvsvsdxr**k**nxik*nr*ki*kir*i*nykfys*yf*
iktk*srqiikyinflxk*iikrrnh*npfla*nif*twkt


Frame C:
nfqriiffwk*kkkkkkk*iii*iiilsqwkcdqviknfstmiglvflmkil*typ*FLM
EKKKKKMKMVVMVVVVALVLVLVLVMXDDENNKXLLSKTVKKSKKSGKFKTINFTADIFK
LKQNEAAKSLNISTSCXNRLLKEEITRIPSLREIYFKPGKR
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U06827-1 (Contig-U06827-1Q)
/CSM_Contig/Contig-U06827-1Q.Seq.d
         (486 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U06827-1 (Contig-U06827-1Q) /CSM_Contig/Conti...   329  2e-90
Contig-U11146-1 (Contig-U11146-1Q) /CSM_Contig/Conti...    40  0.002
Contig-U04398-1 (Contig-U04398-1Q) /CSM_Contig/Conti...    38  0.009
Contig-U13345-1 (Contig-U13345-1Q) /CSM_Contig/Conti...    36  0.034
Contig-U11842-1 (Contig-U11842-1Q) /CSM_Contig/Conti...    36  0.034
Contig-U11803-1 (Contig-U11803-1Q) /CSM_Contig/Conti...    36  0.034
Contig-U11144-1 (Contig-U11144-1Q) /CSM_Contig/Conti...    36  0.034
Contig-U11109-1 (Contig-U11109-1Q) /CSM_Contig/Conti...    36  0.034
Contig-U08918-1 (Contig-U08918-1Q) /CSM_Contig/Conti...    36  0.034
Contig-U03259-1 (Contig-U03259-1Q) /CSM_Contig/Conti...    32  0.53

>Contig-U06827-1 (Contig-U06827-1Q) /CSM_Contig/Contig-U06827-1Q.Seq.d
          Length = 486

 Score =  329 bits (166), Expect = 2e-90
 Identities = 169/169 (100%)
 Strand = Plus / Plus

                                                                       
Query: 318 tcaggtaaatttaaaactataaattttacagctgatatttttaaattaaaacaaaatgaa 377
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tcaggtaaatttaaaactataaattttacagctgatatttttaaattaaaacaaaatgaa 377

                                                                       
Query: 378 gccgccaaatcattaaatatatcaacttcttgtntaaatagattattaaaagaagaaatc 437
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gccgccaaatcattaaatatatcaacttcttgtntaaatagattattaaaagaagaaatc 437

                                                            
Query: 438 actagaatcccttccttgcgtgaaatatattttaaacctggaaaacgtc 486
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 actagaatcccttccttgcgtgaaatatattttaaacctggaaaacgtc 486


 Score =  176 bits (89), Expect = 1e-44
 Identities = 103/110 (93%)
 Strand = Plus / Plus

                                                                       
Query: 74  tattattttaagtcaatggaagtgcgaccaagtgataaagaatttttcaactatgattgg 133
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74  tattattttaagtcaatggaagtgcgaccaagtgataaagaatttttcaactatgattgg 133

                                                             
Query: 134 tttagnnnnnnnaatgaaaattctttaaacttatccataatttttaatgg 183
           |||||       ||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tttagtttttttaatgaaaattctttaaacttatccataatttttaatgg 183


 Score =  131 bits (66), Expect = 8e-31
 Identities = 69/69 (100%)
 Strand = Plus / Plus

                                                                       
Query: 202 tgaagatggtggtgatggtagtggtggtagcgttagtgttagtgttagtgttagtgatgn 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tgaagatggtggtgatggtagtggtggtagcgttagtgttagtgttagtgttagtgatgn 261

                    
Query: 262 aagatgatg 270
           |||||||||
Sbjct: 262 aagatgatg 270


 Score = 40.1 bits (20), Expect = 0.002
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  acaatttccaaaggataata 20
          ||||||||||||||||||||
Sbjct: 1  acaatttccaaaggataata 20


>Contig-U11146-1 (Contig-U11146-1Q) /CSM_Contig/Contig-U11146-1Q.Seq.d
          Length = 2547

 Score = 40.1 bits (20), Expect = 0.002
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 208  tggtggtgatggtagtggtggtag 231
            |||||||| |||||||||||||||
Sbjct: 1877 tggtggtggtggtagtggtggtag 1900


 Score = 28.2 bits (14), Expect = 8.2
 Identities = 20/22 (90%)
 Strand = Plus / Plus

                                  
Query: 208  tggtggtgatggtagtggtggt 229
            |||| ||| |||||||||||||
Sbjct: 1886 tggtagtggtggtagtggtggt 1907


>Contig-U04398-1 (Contig-U04398-1Q) /CSM_Contig/Contig-U04398-1Q.Seq.d
          Length = 1018

 Score = 38.2 bits (19), Expect = 0.009
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 208 tggtggtgatggtagtggtggta 230
           |||| ||||||||||||||||||
Sbjct: 244 tggttgtgatggtagtggtggta 222


 Score = 34.2 bits (17), Expect = 0.13
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 358 ttaaattaaaacaaaat 374
           |||||||||||||||||
Sbjct: 65  ttaaattaaaacaaaat 81


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7749
Number of Sequences: 6905
Number of extensions: 7749
Number of successful extensions: 1036
Number of sequences better than 10.0: 394
length of query: 486
length of database: 5,674,871
effective HSP length: 16
effective length of query: 470
effective length of database: 5,564,391
effective search space: 2615263770
effective search space used: 2615263770
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2008.11.10
Homology vs DNA 
Query= Contig-U06827-1 (Contig-U06827-1Q) /CSM_Contig/Contig-U06827-1Q.Seq.d
         (486 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU266861) Dictyostelium discoideum vegetative cDNA clone:VS...   218   e-142  3
(ED202958) AUAC-aay66d07.b1 Ascaris suum whole genome shotgu...    50   0.009  2
(AC118452) Rattus norvegicus clone CH230-206N15, *** SEQUENC...    50   0.016  4
(CQ341185) Sequence 15279 from Patent WO0157275.                   52   0.019  1
(CQ328471) Sequence 2565 from Patent WO0157275.                    52   0.019  1
(CQ303869) Sequence 14974 from Patent WO0186003.                   52   0.019  1
(CQ291368) Sequence 2473 from Patent WO0186003.                    52   0.019  1
(CQ266896) Sequence 15157 from Patent WO0157277.                   52   0.019  1
(CQ254334) Sequence 2595 from Patent WO0157277.                    52   0.019  1
(CQ228754) Sequence 15593 from Patent WO0157273.                   52   0.019  1
(CQ215756) Sequence 2595 from Patent WO0157273.                    52   0.019  1
(CQ205355) Sequence 7632 from Patent WO0157271.                    52   0.019  1
(CQ200252) Sequence 2529 from Patent WO0157271.                    52   0.019  1
(CQ180991) Sequence 12387 from Patent WO0157274.                   52   0.019  1
(CQ171117) Sequence 2513 from Patent WO0157274.                    52   0.019  1
(CQ145546) Sequence 15568 from Patent WO0157276.                   52   0.019  1
(CQ132545) Sequence 2567 from Patent WO0157276.                    52   0.019  1
(CQ106891) Sequence 15750 from Patent WO0157272.                   52   0.019  1
(CQ093768) Sequence 2627 from Patent WO0157272.                    52   0.019  1
(CQ075914) Sequence 11714 from Patent WO0157278.                   52   0.019  1
(CQ066726) Sequence 2526 from Patent WO0157278.                    52   0.019  1
(CQ056637) Sequence 7457 from Patent WO0157270.                    52   0.019  1
(CQ051669) Sequence 2489 from Patent WO0157270.                    52   0.019  1
(AL078472) Homo sapiens chromosome 21 BAC B11L7C8.                 52   0.019  1
(AC115234) Rattus norvegicus clone CH230-53H5, WORKING DRAFT...    52   0.019  1
(AC097810) Rattus norvegicus clone CH230-30H16, *** SEQUENCI...    52   0.019  1
(FD709253) CAAA15312.fwd CAAA Petromyzon marinus Petromyzon ...    52   0.019  1
(FD709252) CAAA15312.rev CAAA Petromyzon marinus Petromyzon ...    52   0.019  1
(AC178407) Strongylocentrotus purpuratus clone R3-3112E3, WO...    46   0.072  2
(DQ435000) Promerops cafer microsatellite Pro24 sequence.          50   0.074  1
(CT030713) Mouse DNA sequence from clone RP24-94C21 on chrom...    50   0.074  1
(AL807810) Mouse DNA sequence from clone RP23-186F3 on chrom...    50   0.074  1
(AC174449) Mus musculus BAC clone RP23-338O19 from chromosom...    50   0.074  1
(AC154189) Mus musculus BAC clone RP24-458A18 from 17, compl...    50   0.074  1
(AC132413) Mus musculus BAC clone RP23-375I11 from chromosom...    50   0.074  1
(AC127562) Mus musculus BAC clone RP24-279I22 from chromosom...    50   0.074  1
(AC127553) Mus musculus BAC clone RP24-553F11 from chromosom...    50   0.074  1
(AC124180) Mus musculus BAC clone RP23-200I16 from 16, compl...    50   0.074  1
(AC122501) Mus musculus BAC clone RP24-410D23 from chromosom...    50   0.074  1
(AC121566) Mus musculus BAC clone RP23-225D10 from 1, comple...    50   0.074  1
(AC117661) Mus musculus chromosome 6, clone RP23-343P1, comp...    50   0.074  1
(AC102132) Mus musculus chromosome 18, clone RP23-231D1, com...    50   0.074  1
(AC207081) Pongo abelii BAC clone CH276-57N2 from chromosome...    50   0.074  1
(U10295) Fasciola hepatica spliced leader RNA gene.                50   0.074  1
(DQ860210) Trypanosomatidae sp. 7VL-B1 trans-spliced leader ...    50   0.074  1
(AC021860) Homo sapiens BAC clone RP11-617D20 from 4, comple...    50   0.074  1
(AC008764) Homo sapiens chromosome 19 clone CTD-3222D19, com...    50   0.074  1
(AC123907) Rattus norvegicus clone CH230-207E18, WORKING DRA...    50   0.074  1
(AC111693) Rattus norvegicus clone CH230-17E20, *** SEQUENCI...    50   0.074  1
(AC099353) Rattus norvegicus clone CH230-9E15, *** SEQUENCIN...    50   0.074  1
(AM050674) Triticum aestivum BAC 1275L15.                          50   0.074  1
(AC231654) Macaca mulatta chromosome Y clone CH250-63P1, ***...    50   0.074  1
(AC223395) Pongo abelii chromosome UNKNOWN clone CH276-523C6...    50   0.074  1
(AC217129) Macaca mulatta chromosome Y clone CH250-449N17, W...    50   0.074  1
(AC217105) Macaca mulatta chromosome Y clone CH250-324L17, W...    50   0.074  1
(AC214069) Macaca mulatta chromosome Y clone CH250-135I17, W...    50   0.074  1
(AC179206) Strongylocentrotus purpuratus clone R3-4019N20, W...    50   0.074  1
(AC179197) Strongylocentrotus purpuratus clone R3-4019G13, W...    50   0.074  1
(AC178654) Strongylocentrotus purpuratus clone R3-11O14, WOR...    50   0.074  1
(AC176443) Strongylocentrotus purpuratus clone R3-3066P7, WO...    50   0.074  1
(AC176053) Strongylocentrotus purpuratus clone R3-18P10, WOR...    50   0.074  1
(AY079766) AY079766 Scripps Pier (La Jolla, CA) uncultured v...    50   0.074  1
(ER025072) 1095521441502 Global-Ocean-Sampling_GS-33-01-01-1...    50   0.074  1
(CZ287082) cp50e10.r Candida parapsilosis Random Genomic Lib...    50   0.074  1
(CZ282658) cp25e12.r Candida parapsilosis Random Genomic Lib...    50   0.074  1
(CZ282571) cp25a11.r Candida parapsilosis Random Genomic Lib...    50   0.074  1
(DT569959) EST1080599 GH_TMO Gossypium hirsutum cDNA, mRNA s...    50   0.074  1
(DT548390) EST1059030 GH_TMO Gossypium hirsutum cDNA, mRNA s...    50   0.074  1
(EX847055) CBNC6705.fwd CBNC Phycomyces blakesleeanus NRRL15...    50   0.074  1
(EX814085) CBNA3857.fwd CBNA Phycomyces blakesleeanus NRRL15...    50   0.074  1
(CP000961) Shewanella woodyi ATCC 51908, complete genome.          50   0.074  1
(AC122755) Mus musculus clone RP24-136A17, WORKING DRAFT SEQ...    44   0.096  3
(AC144995) Rattus norvegicus strain Brown Norway clone CH230...    44   0.10   2
(AC178418) Strongylocentrotus purpuratus clone R3-3113C02, W...    44   0.12   2
(AC096700) Rattus norvegicus clone CH230-186D13, *** SEQUENC...    46   0.12   4
(AC119387) Rattus norvegicus clone CH230-207O19, *** SEQUENC...    44   0.13   2
(AC168795) Strongylocentrotus purpuratus clone R3-13J1, WORK...    42   0.25   2
(AC180776) Strongylocentrotus purpuratus clone R3-3075E11, W...    44   0.26   2
(AL928959) Mouse DNA sequence from clone RP23-73I19 on chrom...    48   0.29   1
(AL845172) Mouse DNA sequence from clone RP23-285J17 on chro...    48   0.29   1
(AL672013) Mouse DNA sequence from clone RP23-32G8 on chromo...    48   0.29   1
(AL606824) Mouse DNA sequence from clone RP23-9G13 on chromo...    48   0.29   1
(AC122495) Mus musculus BAC clone RP24-397P10 from 9, comple...    48   0.29   1
(AC121813) Mus musculus BAC clone RP23-457E5 from 9, complet...    48   0.29   1
(AL954248) Pan troglodytes chromosome 22 clone PTB-061A04 ma...    48   0.29   1
(Z49384) S.cerevisiae chromosome X reading frame ORF YJL109c.      48   0.29   1
(X85021) S.cerevisiae DNA from left arm of chromosome X.           48   0.29   1
(DJ206678) Method for identification of useful proteins deri...    48   0.29   1
(DJ025878) Genome-wide DNA marker of Saccharomyces cerevisiae.     48   0.29   1
(CQ605942) Sequence 33700 from Patent WO0171042.                   48   0.29   1
(CQ342957) Sequence 17051 from Patent WO0157275.                   48   0.29   1
(CQ330218) Sequence 4312 from Patent WO0157275.                    48   0.29   1
(CQ305785) Sequence 16890 from Patent WO0186003.                   48   0.29   1
(CQ293263) Sequence 4368 from Patent WO0186003.                    48   0.29   1
(CQ268763) Sequence 17024 from Patent WO0157277.                   48   0.29   1
(CQ256177) Sequence 4438 from Patent WO0157277.                    48   0.29   1
(CQ230626) Sequence 17465 from Patent WO0157273.                   48   0.29   1
(CQ217616) Sequence 4455 from Patent WO0157273.                    48   0.29   1
(CQ207168) Sequence 9445 from Patent WO0157271.                    48   0.29   1
(CQ202046) Sequence 4323 from Patent WO0157271.                    48   0.29   1

>(AU266861) Dictyostelium discoideum vegetative cDNA clone:VSG845,
           5' end single read.
          Length = 487

 Score =  218 bits (110), Expect(3) = e-142
 Identities = 110/110 (100%)
 Strand = Plus / Plus


Query: 74  tattattttaagtcaatggaagtgcgaccaagtgataaagaatttttcaactatgattgg 133
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74  tattattttaagtcaatggaagtgcgaccaagtgataaagaatttttcaactatgattgg 133


Query: 134 tttagtttttttaatgaaaattctttaaacttatccataatttttaatgg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 tttagtttttttaatgaaaattctttaaacttatccataatttttaatgg 183

 Score =  216 bits (109), Expect(3) = e-142
 Identities = 112/112 (100%)
 Strand = Plus / Plus


Query: 375 gaagccgccaaatcattaaatatatcaacttcttgtntaaatagattattaaaagaagaa 434
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gaagccgccaaatcattaaatatatcaacttcttgtntaaatagattattaaaagaagaa 434


Query: 435 atcactagaatcccttccttgcgtgaaatatattttaaacctggaaaacgtc 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 atcactagaatcccttccttgcgtgaaatatattttaaacctggaaaacgtc 486

 Score =  131 bits (66), Expect(3) = e-142
 Identities = 69/69 (100%)
 Strand = Plus / Plus


Query: 202 tgaagatggtggtgatggtagtggtggtagcgttagtgttagtgttagtgttagtgatgn 261
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tgaagatggtggtgatggtagtggtggtagcgttagtgttagtgttagtgttagtgatgn 261


Query: 262 aagatgatg 270
           |||||||||
Sbjct: 262 aagatgatg 270

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 394,870,066
Number of extensions: 26457279
Number of successful extensions: 2358088
Number of sequences better than 10.0: 657
Length of query: 486
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 463
Effective length of database: 93,106,754,628
Effective search space: 43108427392764
Effective search space used: 43108427392764
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
protein update 2009. 6.22
Homology vs Protein 
Query= Contig-U06827-1 (Contig-U06827-1Q) /CSM_Contig/Contig-U06827-1Q.Seq.d
         (486 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014188_261(AE014188|pid:none) Plasmodium falciparum 3D7 chromo...    33   4.5

>AE014188_261(AE014188|pid:none) Plasmodium falciparum 3D7
           chromosome 12, complete sequence.
           &AE014848_26(AE014848|pid:none)
          Length = 1162

 Score = 32.7 bits (73), Expect = 4.5
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = +2

Query: 77  YFKSMEVRPSDKEFFNYDWFSFFNENSLNLSIIFNGKKKEKN 202
           YFK  + R   KEFFN+++ S +N  + N ++ F   K ++N
Sbjct: 732 YFKYKKKRKGAKEFFNHNYSSTYNYINNNNTLYFMNNKMDEN 773

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 421,836,197
Number of extensions: 4972598
Number of successful extensions: 11121
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11120
Number of HSP's successfully gapped: 1
Length of query: 162
Length of database: 1,040,966,779
Length adjustment: 118
Effective length of query: 44
Effective length of database: 662,861,149
Effective search space: 29165890556
Effective search space used: 29165890556
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
PSORT 

 psg: 0.99  gvh: 0.62  alm: 0.03  top: 0.20  tms: 0.07  mit: 0.17  mip: 0.00
 nuc: 0.20  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 24.0 %: cytoplasmic
	 20.0 %: nuclear
	 20.0 %: endoplasmic reticulum
	 12.0 %: Golgi
	 12.0 %: mitochondrial
	  4.0 %: extracellular, including cell wall
	  4.0 %: vacuolar
	  4.0 %: plasma membrane

>> prediction for Contig-U06827-1 is cyt
VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0