Contig-U06794-1
Contig ID Contig-U06794-1
Contig update 2001. 8.30
Contig sequence
>Contig-U06794-1 (Contig-U06794-1Q) /CSM_Contig/Contig-U06794-1Q.Seq.d
ATCAGACCATGTCAAATTGGTGACTTAATGTCAATGCAAAATGCAAATTT
AACATGTTTACCAGAAAATTATCAAATGAAATATTATTTATATCACTTTT
TAACATGGCCACAAACTTCTTTTGTTGCTGAAGATGATAAAGGAAATGTT
GTTGGTTACGTTTTAGCTAAAATTGATGAAAATGAACCAAAAAGAGGACA
TATTACATCATTAGCAGTTTTAAGATCACAAAGAAAATTAGGTATTGCAA
CTAAATTAATGAAACAAGCAGAAGTTGCATTATTAGAAGTTTATGATGCT
GATTGTGTTTCACTTCACGTTAGAAAATCAAATAGAGCCGCTTTCTCTTT
ATATCATGAAGTTTTAAAATTCAAAATTGATGAAATTGAAAAAGAATATT
ATGGTGATAAAGAAGATGCATATTCAATGGTTTTATATCTTAAACCAGAA
GTTGAAGAAGAAAAAGAAAGAGAGAAACAATTAGAAAAAATTAATAAAGC
TGCAAAAGAATCAATTGAAGCTGCAAAACGTGCAAACGAAGAACCAAAAC
CAGTTTCAAATGTTATTCATGGTAAAAAGAAAAATGTAAAAAAAATAGAA
TAAAAAAATAAATAAATAACAA

Gap no gap
Contig length 622
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 5829871
End point 5829248
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U06794
List of clone(s)

est1=VSG335E,1,623
Translated Amino Acid sequence
IRPCQIGDLMSMQNANLTCLPENYQMKYYLYHFLTWPQTSFVAEDDKGNVVGYVLAKIDE
NEPKRGHITSLAVLRSQRKLGIATKLMKQAEVALLEVYDADCVSLHVRKSNRAAFSLYHE
VLKFKIDEIEKEYYGDKEDAYSMVLYLKPEVEEEKEREKQLEKINKAAKESIEAAKRANE
EPKPVSNVIHGKKKNVKKIE*knk*it


Translated Amino Acid sequence (All Frames)
Frame A:
IRPCQIGDLMSMQNANLTCLPENYQMKYYLYHFLTWPQTSFVAEDDKGNVVGYVLAKIDE
NEPKRGHITSLAVLRSQRKLGIATKLMKQAEVALLEVYDADCVSLHVRKSNRAAFSLYHE
VLKFKIDEIEKEYYGDKEDAYSMVLYLKPEVEEEKEREKQLEKINKAAKESIEAAKRANE
EPKPVSNVIHGKKKNVKKIE*knk*it


Frame B:
sdhvklvt*cqckmqi*hvyqkiik*niiyitf*hghklllllkmikemllvtf*lklmk
mnqkedilhh*qf*dhken*vlqln**nkqklhy*kfmmlivfhftlenqieplslyimk
f*nsklmklkknimvikkmhiqwfyilnqklkkkkkernn*kkliklqknqlklqnvqtk
nqnqfqmlfmvkrkm*kk*nkkink*q


Frame C:
qtmsnw*lnvnakckfnmftrklsneilfislfnmatnffcc*r**rkccwlrfs*n**k
*tkkrtyyiissfkitkkirycn*inetsrsciirsl*c*lcftsr*kik*srflfis*s
fkiqn**n*krilw**rrcifngfis*trs*rrkrkretirkn**sckrin*scktckrr
tktsfkcysw*kekckknrikk*inn


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U06794-1 (Contig-U06794-1Q)
/CSM_Contig/Contig-U06794-1Q.Seq.d
(622 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U06794-1 (Contig-U06794-1Q) /CSM_Contig/Conti... 896 0.0
Contig-U13873-1 (Contig-U13873-1Q) /CSM_Contig/Conti... 40 0.003
Contig-U12423-1 (Contig-U12423-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U11145-1 (Contig-U11145-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U05943-1 (Contig-U05943-1Q) /CSM_Contig/Conti... 38 0.011
Contig-U14510-1 (Contig-U14510-1Q) /CSM_Contig/Conti... 36 0.043
Contig-U14440-1 (Contig-U14440-1Q) /CSM_Contig/Conti... 36 0.043
Contig-U11202-1 (Contig-U11202-1Q) /CSM_Contig/Conti... 36 0.043
Contig-U11132-1 (Contig-U11132-1Q) /CSM_Contig/Conti... 36 0.043
Contig-U08170-1 (Contig-U08170-1Q) /CSM_Contig/Conti... 36 0.043

>Contig-U06794-1 (Contig-U06794-1Q) /CSM_Contig/Contig-U06794-1Q.Seq.d
Length = 622

Score = 896 bits (452), Expect = 0.0
Identities = 452/452 (100%)
Strand = Plus / Plus


Query: 1 atcagaccatgtcaaattggtgacttaatgtcaatgcaaaatgcaaatttaacatgttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcagaccatgtcaaattggtgacttaatgtcaatgcaaaatgcaaatttaacatgttta 60


Query: 61 ccagaaaattatcaaatgaaatattatttatatcactttttaacatggccacaaacttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccagaaaattatcaaatgaaatattatttatatcactttttaacatggccacaaacttct 120


Query: 121 tttgttgctgaagatgataaaggaaatgttgttggttacgttttagctaaaattgatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttgttgctgaagatgataaaggaaatgttgttggttacgttttagctaaaattgatgaa 180


Query: 181 aatgaaccaaaaagaggacatattacatcattagcagttttaagatcacaaagaaaatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatgaaccaaaaagaggacatattacatcattagcagttttaagatcacaaagaaaatta 240


Query: 241 ggtattgcaactaaattaatgaaacaagcagaagttgcattattagaagtttatgatgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggtattgcaactaaattaatgaaacaagcagaagttgcattattagaagtttatgatgct 300


Query: 301 gattgtgtttcacttcacgttagaaaatcaaatagagccgctttctctttatatcatgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gattgtgtttcacttcacgttagaaaatcaaatagagccgctttctctttatatcatgaa 360


Query: 361 gttttaaaattcaaaattgatgaaattgaaaaagaatattatggtgataaagaagatgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttttaaaattcaaaattgatgaaattgaaaaagaatattatggtgataaagaagatgca 420


Query: 421 tattcaatggttttatatcttaaaccagaagt 452
||||||||||||||||||||||||||||||||
Sbjct: 421 tattcaatggttttatatcttaaaccagaagt 452


Score = 125 bits (63), Expect = 6e-29
Identities = 63/63 (100%)
Strand = Plus / Plus


Query: 511 tcaattgaagctgcaaaacgtgcaaacgaagaaccaaaaccagtttcaaatgttattcat 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tcaattgaagctgcaaaacgtgcaaacgaagaaccaaaaccagtttcaaatgttattcat 570


Query: 571 ggt 573
|||
Sbjct: 571 ggt 573


>Contig-U13873-1 (Contig-U13873-1Q) /CSM_Contig/Contig-U13873-1Q.Seq.d
Length = 1474

Score = 40.1 bits (20), Expect = 0.003
Identities = 26/28 (92%)
Strand = Plus / Plus


Query: 514 attgaagctgcaaaacgtgcaaacgaag 541
|||||||||||||||| |||||| ||||
Sbjct: 1129 attgaagctgcaaaacttgcaaaagaag 1156


>Contig-U12423-1 (Contig-U12423-1Q) /CSM_Contig/Contig-U12423-1Q.Seq.d
Length = 1436

Score = 38.2 bits (19), Expect = 0.011
Identities = 25/27 (92%)
Strand = Plus / Plus


Query: 367 aaattcaaaattgatgaaattgaaaaa 393
|||||||||||||||||| |||||||
Sbjct: 839 aaattcaaaattgatgaatatgaaaaa 865


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9577
Number of Sequences: 6905
Number of extensions: 9577
Number of successful extensions: 1175
Number of sequences better than 10.0: 151
length of query: 622
length of database: 5,674,871
effective HSP length: 16
effective length of query: 606
effective length of database: 5,564,391
effective search space: 3372020946
effective search space used: 3372020946
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11.10
Homology vs DNA
Query= Contig-U06794-1 (Contig-U06794-1Q) /CSM_Contig/Contig-U06794-1Q.Seq.d
(622 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU266328) Dictyostelium discoideum vegetative cDNA clone:VS... 884 0.0 2
(U06453) Dictyostelium discoideum AX2 N-terminal acetyltrans... 884 0.0 2
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 398 0.0 4
(AU266327) Dictyostelium discoideum vegetative cDNA clone:VS... 801 0.0 1
(CR940353) Theileria annulata genomic DNA chromosome 4. 68 2e-10 2
(CD420647) ku89f12.y1 Strongyloides ratti PA female naive pA... 74 7e-09 1
(CB097787) ku45b04.y1 Strongyloides ratti PA female naive pA... 74 7e-09 1
(FC818935) Sr_pAMT7_013f24_T7 S. ratti mixed stage pAMP Stro... 74 7e-09 1
(EU162369) Onthophagus sugillatus ARD1-like protein a (Ard1a... 70 1e-07 1
(DC238348) Hodotermopsis sjoestedti cDNA clone: MY0742BHsHg_... 58 1e-07 2
(ES624574) NGPPT82TR NGPP Nasonia giraulti cDNA, mRNA sequence. 62 2e-07 2
(ES626150) NGPQS48TR NGPP Nasonia giraulti cDNA, mRNA sequence. 62 3e-07 2
(EV420311) 210790224 NGP Nasonia giraulti cDNA clone 162M5 3... 62 3e-07 2
(ES632281) NGPU008TR NGPP Nasonia giraulti cDNA, mRNA sequence. 62 3e-07 2
(EV420005) 210783408 NGP Nasonia giraulti cDNA clone 162M5 5... 62 3e-07 2
(EV417995) 210767607 NGP Nasonia giraulti cDNA clone 172O11 ... 62 3e-07 2
(ES627237) NGPRB54TR NGPP Nasonia giraulti cDNA, mRNA sequence. 62 3e-07 2
(ES636654) NVPBX35TR NVPA Nasonia vitripennis cDNA, mRNA seq... 62 3e-07 2
(ES645044) NVPQY62TR NVPP Nasonia vitripennis cDNA, mRNA seq... 62 3e-07 2
(EV415085) 210742185 NGP Nasonia giraulti cDNA clone 166A17 ... 62 3e-07 2
(EB078693) EST1229315 Nasonia vitripennis (wasp) pupal-adult... 62 3e-07 2
(EV415360) 210748911 NGP Nasonia giraulti cDNA clone 166A17 ... 62 3e-07 2
(EB079745) EST1230367 Nasonia vitripennis (wasp) pre-pupal E... 62 3e-07 2
(EV423047) 210813451 NGP Nasonia giraulti cDNA clone 157G15 ... 62 3e-07 2
(ES649759) NVPT466TR NVPP Nasonia vitripennis cDNA, mRNA seq... 62 4e-07 2
(EB080418) EST1231040 Nasonia vitripennis (wasp) pre-pupal E... 62 4e-07 2
(EV416980) 210761940 NGP Nasonia giraulti cDNA clone 172O11 ... 62 4e-07 2
(DB753847) Apis mellifera head cDNA, RIKEN full-length enric... 68 4e-07 1
(DB746367) Apis mellifera head cDNA, RIKEN full-length enric... 68 4e-07 1
(BI516286) BB160022A10A04.5 Bee Brain Normalized Library, BB... 68 4e-07 1
(EH774769) CNSM7096.b1_P21.ab1 CNS(LMS) yellow starthistle C... 60 1e-06 2
(AA294389) SWOv3MCA575SK Onchocerca volvulus molting L3 larv... 50 2e-06 2
(FG082175) UI-FF-IH0-aaz-n-20-0-UI.r1 Ceratitis capitata adu... 46 2e-06 3
(AZ691449) ENTKT13TR Entamoeba histolytica Sheared DNA Entam... 56 4e-06 3
(FG077100) UI-FF-IF0-abq-n-09-0-UI.r1 Ceratitis capitata emb... 46 7e-06 2
(FG074403) UI-FF-IF0-abi-j-21-0-UI.r1 Ceratitis capitata emb... 46 7e-06 2
(FG072262) UI-FF-IF0-aal-h-09-0-UI.r1 Ceratitis capitata emb... 46 8e-06 3
(FG078953) UI-FF-IH0-aao-n-16-0-UI.r1 Ceratitis capitata adu... 46 9e-06 3
(CN770922) taf28f08.y1 Hydra EST Darmstadt I Hydra magnipapi... 52 1e-05 2
(FG085522) CMRC-FF-IH0-aca-l-15-0-CMRC.r1 Ceratitis capitata... 46 3e-05 2
(FG071922) UI-FF-IF0-aaj-k-12-0-UI.r1 Ceratitis capitata emb... 46 3e-05 2
(FG070179) UI-FF-IF0-aae-d-09-0-UI.r1 Ceratitis capitata emb... 46 3e-05 2
(CK809579) Rasgsc3228 Salivary Gland 4th instar 3rd period (... 48 3e-05 2
(FG073295) UI-FF-IF0-abf-o-20-0-UI.r1 Ceratitis capitata emb... 46 3e-05 2
(FG074322) UI-FF-IF0-abi-k-14-0-UI.r1 Ceratitis capitata emb... 46 3e-05 2
(FG075415) UI-FF-IF0-abl-o-16-0-UI.r1 Ceratitis capitata emb... 46 3e-05 2
(FG071851) UI-FF-IF0-aaj-o-03-0-UI.r1 Ceratitis capitata emb... 46 3e-05 2
(BJ931640) Daphnia magna cDNA, clone:WTH001_0003_H11.f, 5' e... 54 4e-05 2
(BY998072) Gryllus bimaculatus mRNA, clone:GBKO105_F10, 5'-e... 56 8e-05 2
(AU214241) Caenorhabditis elegans cDNA clone:yk810h05 : 3' e... 40 1e-04 2
(EY256553) BF01012B2E02.f1 Normalized subtracted keck librar... 44 1e-04 2
(CB104236) ADP_SQ017@F5 AD-wrmcDNA Caenorhabditis elegans cD... 40 1e-04 2
(AU202633) Caenorhabditis elegans cDNA clone:yk810h05 : 5' e... 40 1e-04 2
(CB384357) OSTF001F7_1 AD-wrmcDNA Caenorhabditis elegans cDN... 40 1e-04 2
(CX087460) EHACZ81TR E. histolytica Normalized cDNA library ... 56 3e-04 2
(AZ674935) ENTHC73TF Entamoeba histolytica Sheared DNA Entam... 56 3e-04 2
(FG071747) UI-FF-IF0-aai-l-22-0-UI.r1 Ceratitis capitata emb... 46 4e-04 2
(AM633002) Entamoeba dispar GSS, clone dispar96h01.q1k. 48 4e-04 3
(AZ532846) ENTCB02TF Entamoeba histolytica Sheared DNA Entam... 48 5e-04 3
(DN603448) ACAC-aac10c14.g1 Hydra EST UCI 7 Hydra magnipapil... 44 0.001 2
(BX908743) Zebrafish DNA sequence from clone RP71-3H8 in lin... 56 0.002 1
(BX901930) Zebrafish DNA sequence from clone RP71-15D4 in li... 56 0.002 1
(FC806708) CBGC8458.fwd CBGC Lottia gigantea 15h 18h embryos... 56 0.002 1
(FC729913) CBBG5682.fwd CBBG Lottia gigantea 12,15,18h embry... 56 0.002 1
(FC717815) CBBG1174.fwd CBBG Lottia gigantea 12,15,18h embry... 56 0.002 1
(EK561037) 1095521002862 Global-Ocean-Sampling_GS-32-01-01-1... 44 0.006 3
(EU020739) Antheraea paukstadtorum clone Apauk3089f1 putativ... 54 0.006 1
(EH633181) EST4288 LK04 Laupala kohalensis cDNA clone 106102... 54 0.006 1
(FE386485) CBNT4568.fwd CBNT_Daphnia_pulex_Chosen_One_Librar... 54 0.006 1
(FE386484) CBNT4568.rev CBNT_Daphnia_pulex_Chosen_One_Librar... 54 0.006 1
(FE377957) CBNS2992.fwd CBNS_Daphnia_pulex_Chosen_One_Librar... 54 0.006 1
(FE377956) CBNS2992.rev CBNS_Daphnia_pulex_Chosen_One_Librar... 54 0.006 1
(FE368791) CBNO571.fwd CBNO_Daphnia_pulex_Chosen_One_Library... 54 0.006 1
(FE355554) CBIC9222.fwd CBIC_Daphnia_pulex_Chosen_One_Librar... 54 0.006 1
(FE355553) CBIC9222.rev CBIC_Daphnia_pulex_Chosen_One_Librar... 54 0.006 1
(AM875284) Venerupis (Ruditapes) philippinarum EST, 5' end s... 42 0.011 2
(EX629025) 255455881 Pea aphid whole body normalized full le... 46 0.014 2
(BB992792) Bombyx mori cDNA, clone:E_ET_psgV_03A06_R_0, 3' e... 38 0.016 3
(AV402504) Bombyx mori cDNA clone:heS30049. 38 0.019 3
(BP125559) Bombyx mori cDNA, clone:heS30049, 5' end sequence. 38 0.019 3
(AC214563) Bos taurus clone CH240-111D8, WORKING DRAFT SEQUE... 52 0.024 1
(AC174951) Bos taurus clone CH240-115A10, WORKING DRAFT SEQU... 52 0.024 1
(AC174811) Bos taurus clone CH240-170H13, WORKING DRAFT SEQU... 52 0.024 1
(AV266783) Mus musculus adult male testis cDNA, RIKEN full-l... 52 0.024 1
(BP723115) Xenopus laevis NBRP cDNA clone:XL455c13ex, 3' end. 52 0.024 1
(FD461536) LARVM42TR Haematobia irritans 1st Instar Larvae H... 52 0.024 1
(FD461535) LARVM42TF Haematobia irritans 1st Instar Larvae H... 52 0.024 1
(FD461086) LARVJ53TR Haematobia irritans 1st Instar Larvae H... 52 0.024 1
(FD461085) LARVJ53TF Haematobia irritans 1st Instar Larvae H... 52 0.024 1
(FD460871) LARVI12TR Haematobia irritans 1st Instar Larvae H... 52 0.024 1
(FD460870) LARVI12TF Haematobia irritans 1st Instar Larvae H... 52 0.024 1
(FD459994) LARVC54TR Haematobia irritans 1st Instar Larvae H... 52 0.024 1
(FD459993) LARVC54TF Haematobia irritans 1st Instar Larvae H... 52 0.024 1
(FD455557) EGGB225TR Haematobia irritans eggs Haematobia irr... 52 0.024 1
(FD455556) EGGB225TF Haematobia irritans eggs Haematobia irr... 52 0.024 1
(FD454372) EGGAU23TR Haematobia irritans eggs Haematobia irr... 52 0.024 1
(FD454371) EGGAU23TF Haematobia irritans eggs Haematobia irr... 52 0.024 1
(FD454153) EGGAS65TR Haematobia irritans eggs Haematobia irr... 52 0.024 1
(EK254439) 1095462003382 Global-Ocean-Sampling_GS-31-01-01-1... 40 0.049 2
(DT666220) He_wd2a1_93B03_M13R Heliconius erato wing disk 2 ... 46 0.056 2

>(AU266328) Dictyostelium discoideum vegetative cDNA clone:VSG335,
3' end single read.
Length = 623

Score = 884 bits (446), Expect(2) = 0.0
Identities = 446/446 (100%)
Strand = Plus / Plus


Query: 1 atcagaccatgtcaaattggtgacttaatgtcaatgcaaaatgcaaatttaacatgttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atcagaccatgtcaaattggtgacttaatgtcaatgcaaaatgcaaatttaacatgttta 60


Query: 61 ccagaaaattatcaaatgaaatattatttatatcactttttaacatggccacaaacttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccagaaaattatcaaatgaaatattatttatatcactttttaacatggccacaaacttct 120


Query: 121 tttgttgctgaagatgataaaggaaatgttgttggttacgttttagctaaaattgatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttgttgctgaagatgataaaggaaatgttgttggttacgttttagctaaaattgatgaa 180


Query: 181 aatgaaccaaaaagaggacatattacatcattagcagttttaagatcacaaagaaaatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatgaaccaaaaagaggacatattacatcattagcagttttaagatcacaaagaaaatta 240


Query: 241 ggtattgcaactaaattaatgaaacaagcagaagttgcattattagaagtttatgatgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggtattgcaactaaattaatgaaacaagcagaagttgcattattagaagtttatgatgct 300


Query: 301 gattgtgtttcacttcacgttagaaaatcaaatagagccgctttctctttatatcatgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gattgtgtttcacttcacgttagaaaatcaaatagagccgctttctctttatatcatgaa 360


Query: 361 gttttaaaattcaaaattgatgaaattgaaaaagaatattatggtgataaagaagatgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttttaaaattcaaaattgatgaaattgaaaaagaatattatggtgataaagaagatgca 420


Query: 421 tattcaatggttttatatcttaaacc 446
||||||||||||||||||||||||||
Sbjct: 421 tattcaatggttttatatcttaaacc 446

Score = 123 bits (62), Expect(2) = 0.0
Identities = 62/62 (100%)
Strand = Plus / Plus


Query: 512 caattgaagctgcaaaacgtgcaaacgaagaaccaaaaccagtttcaaatgttattcatg 571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 caattgaagctgcaaaacgtgcaaacgaagaaccaaaaccagtttcaaatgttattcatg 571


Query: 572 gt 573
||
Sbjct: 572 gt 573

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 727,428,460
Number of extensions: 46758114
Number of successful extensions: 4334666
Number of sequences better than 10.0: 363
Length of query: 622
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 599
Effective length of database: 93,106,754,628
Effective search space: 55770946022172
Effective search space used: 55770946022172
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.22
Homology vs Protein
Query= Contig-U06794-1 (Contig-U06794-1Q) /CSM_Contig/Contig-U06794-1Q.Seq.d
(622 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC115598_24(AC115598|pid:none) Dictyostelium discoideum chromoso... 344 1e-93
AF047659_11(AF047659|pid:none) Caenorhabditis elegans cosmid K07... 186 4e-46
AB011484_5(AB011484|pid:none) Arabidopsis thaliana genomic DNA, ... 186 6e-46
AF384038_1(AF384038|pid:none) Zea mays silencing group B protein... 184 2e-45
AM452409_3(AM452409|pid:none) Vitis vinifera contig VV78X146669.... 183 3e-45
BT035063_1(BT035063|pid:none) Zea mays full-length cDNA clone ZM... 182 5e-45
DQ889592_1(DQ889592|pid:none) Arachis hypogaea clone 2E49 N-acet... 182 7e-45
BT057358_1(BT057358|pid:none) Salmo salar clone ssal-rgb2-544-33... 181 2e-44
BT056532_1(BT056532|pid:none) Salmo salar clone ssal-evf-549-135... 181 2e-44
EF144610_1(EF144610|pid:none) Populus trichocarpa clone WS01111_... 180 3e-44
BT075610_1(BT075610|pid:none) Osmerus mordax clone omor-rgc-511-... 180 3e-44
EF084396_1(EF084396|pid:none) Picea sitchensis clone WS02814_O05... 179 4e-44
BC080651_1(BC080651|pid:none) Homo sapiens ARD1 homolog B (S. ce... 179 4e-44
BC004552_1(BC004552|pid:none) Homo sapiens ARD1 homolog B (S. ce... 179 4e-44
BC044094_1(BC044094|pid:none) Xenopus laevis N-acetyltransferase... 179 7e-44
(P41227) RecName: Full=N-terminal acetyltransferase complex ARD1... 178 1e-43
AL672002_16(AL672002|pid:none) Mouse DNA sequence from clone RP2... 178 1e-43
(Q9QY36) RecName: Full=N-terminal acetyltransferase complex ARD1... 178 1e-43
AK009697_1(AK009697|pid:none) Mus musculus adult male tongue cDN... 178 1e-43
AK010599_1(AK010599|pid:none) Mus musculus ES cells cDNA, RIKEN ... 177 2e-43
BC127540_1(BC127540|pid:none) Rattus norvegicus similar to DNA s... 177 2e-43
AK133248_1(AK133248|pid:none) Mus musculus adult male testis cDN... 177 2e-43
BT076879_1(BT076879|pid:none) Caligus rogercresseyi clone crog-e... 177 2e-43
(Q4V8K3) RecName: Full=N-terminal acetyltransferase complex ARD1... 177 2e-43
AK171121_1(AK171121|pid:none) Mus musculus NOD-derived CD11c +ve... 176 4e-43
EF146498_1(EF146498|pid:none) Populus trichocarpa clone WS0118_J... 176 5e-43
DQ018765_1(DQ018765|pid:none) Macropus giganteus isolate MG008 N... 176 6e-43
(Q9UTI3) RecName: Full=N-terminal acetyltransferase A complex ca... 174 2e-42
DQ018758_1(DQ018758|pid:none) Macropus giganteus isolate MG006 N... 173 3e-42
AL672002_13(AL672002|pid:none) Mouse DNA sequence from clone RP2... 169 4e-41
EU961245_1(EU961245|pid:none) Zea mays clone 233791 N-terminal a... 168 1e-40
CP001323_877(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 165 8e-40
AY813822_1(AY813822|pid:none) Schistosoma japonicum SJCHGC06121 ... 164 2e-39
DQ018760_1(DQ018760|pid:none) Macropus giganteus isolate MG005 N... 160 4e-38
AJ277476_1(AJ277476|pid:none) Trypanosoma brucei ARD1 gene for p... 158 1e-37
CR954206_481(CR954206|pid:none) Ostreococcus tauri strain OTTH05... 155 9e-37
AK296593_1(AK296593|pid:none) Homo sapiens cDNA FLJ60638 complet... 154 2e-36
CR382128_218(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 154 3e-36
AL672002_12(AL672002|pid:none) Mouse DNA sequence from clone RP2... 152 6e-36
(P07347) RecName: Full=N-terminal acetyltransferase A complex ca... 151 2e-35
M11621_1(M11621|pid:none) Saccharomyces cerevisiae arrest-defect... 150 3e-35
CU928171_220(CU928171|pid:none) Kluyveromyces thermotolerans str... 149 6e-35
AE014185_34(AE014185|pid:none) Plasmodium falciparum 3D7 chromos... 149 8e-35
CT005252_26(CT005252|pid:none) Leishmania major strain Friedlin,... 148 1e-34
AM270158_21(AM270158|pid:none) Aspergillus niger contig An08c003... 148 1e-34
AM910990_20(AM910990|pid:none) Plasmodium knowlesi strain H chro... 147 2e-34
AM502231_33(AM502231|pid:none) Leishmania infantum chromosome 13. 147 3e-34
AM920431_660(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 145 7e-34
EU162357_1(EU162357|pid:none) Onthophagus acuminatus ARD1-like p... 145 1e-33
AE016819_642(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 144 2e-33
EU162363_1(EU162363|pid:none) Onthophagus hecate ARD1-like prote... 142 6e-33
AK315997_1(AK315997|pid:none) Homo sapiens cDNA, FLJ78896 comple... 137 2e-31
AK078700_1(AK078700|pid:none) Mus musculus adult male eyeball cD... 137 2e-31
FN314350_1(FN314350|pid:none) Schistosoma japonicum isolate Anhu... 135 7e-31
EU020734_1(EU020734|pid:none) Podura aquatica clone Paq3089f1 pu... 124 3e-27
EU020739_1(EU020739|pid:none) Antheraea paukstadtorum clone Apau... 123 5e-27
EU020737_1(EU020737|pid:none) Triops longicaudatus clone Tlo3089... 122 8e-27
EU020733_1(EU020733|pid:none) Cypridopsis vidua clone Ost3089f2 ... 117 3e-25
EU020736_1(EU020736|pid:none) Thulinius stephaniae clone Thul308... 115 1e-24
EU020731_1(EU020731|pid:none) Narceus americanus clone Nam3089f1... 113 4e-24
DQ018759_1(DQ018759|pid:none) Macropus giganteus isolate MG004 N... 112 8e-24
CP001014_25(CP001014|pid:none) Thermoproteus neutrophilus V24Sta... 100 3e-20
AX887129_1(AX887129|pid:none) Sequence 2992 from Patent EP1033401. 99 1e-19
(Q976C3) RecName: Full=Uncharacterized N-acetyltransferase ST025... 96 6e-19
CP000561_2128(CP000561|pid:none) Pyrobaculum calidifontis JCM 11... 91 2e-17
(Q4JBG0) RecName: Full=Uncharacterized N-acetyltransferase Saci_... 91 3e-17
AX972724_1(AX972724|pid:none) Sequence 3527 from Patent EP1104808. 91 3e-17
CU640366_264(CU640366|pid:none) Podospora anserina genomic DNA c... 91 3e-17
CP000504_1057(CP000504|pid:none) Pyrobaculum islandicum DSM 4184... 88 2e-16
AE009441_525(AE009441|pid:none) Pyrobaculum aerophilum str. IM2,... 88 2e-16
CP000493_950(CP000493|pid:none) Hyperthermus butylicus DSM 5456,... 87 5e-16
EU162372_1(EU162372|pid:none) Phanaeus sp. CWC-2007 ARD1-like pr... 86 1e-15
CP001404_829(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51,... 84 2e-15
CP000505_294(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 84 2e-15
CR382130_568(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 84 3e-15
(Q980R9) RecName: Full=Uncharacterized N-acetyltransferase SSO02... 84 3e-15
AE006641_188(AE006641|pid:none) Sulfolobus solfataricus P2, comp... 84 3e-15
CP001400_1777(CP001400|pid:none) Sulfolobus islandicus M.14.25, ... 84 3e-15
BX842618_8(BX842618|pid:none) Neurospora crassa DNA linkage grou... 84 4e-15
AE014298_3023(AE014298|pid:none) Drosophila melanogaster chromos... 82 2e-14
CR954204_181(CR954204|pid:none) Ostreococcus tauri strain OTTH05... 81 3e-14
DQ311382_1(DQ311382|pid:none) Bombyx mori N-acetyltransferase mR... 80 4e-14
AC024878_1(AC024878|pid:none) Caenorhabditis elegans cosmid Y97E... 80 5e-14
EU574796_1(EU574796|pid:none) Ornithodoros coriaceus clone OC-10... 80 6e-14
BC129286_1(BC129286|pid:none) Danio rerio N-acetyltransferase 5,... 79 8e-14
CP001325_653(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 79 1e-13
BT048012_1(BT048012|pid:none) Salmo salar clone ssal-eve-560-283... 79 1e-13
(Q7ZXR3) RecName: Full=N-acetyltransferase 5; EC=2.3.1.... 77 3e-13
EU016665_11(EU016665|pid:none) Uncultured Group I marine crenarc... 77 3e-13
(P61599) RecName: Full=N-acetyltransferase 5; EC=2.3.1.... 77 3e-13
EU016615_11(EU016615|pid:none) Uncultured Group I marine crenarc... 77 4e-13
CP001140_328(CP001140|pid:none) Desulfurococcus kamchatkensis 12... 76 7e-13
BT048187_1(BT048187|pid:none) Salmo salar clone ssal-evd-525-273... 76 9e-13
AB236846_1(AB236846|pid:none) Trifolium pratense RNA for hypothe... 75 1e-12
AM269962_20(AM269962|pid:none) Aspergillus niger contig An01c015... 75 1e-12
AM393470_1(AM393470|pid:none) Synthetic construct Homo sapiens c... 75 2e-12
AL035454_2(AL035454|pid:none) Human DNA sequence from clone RP5-... 75 2e-12
AF387013_1(AF387013|pid:none) Arabidopsis thaliana Unknown prote... 74 3e-12
AM393560_1(AM393560|pid:none) Synthetic construct Homo sapiens c... 74 3e-12
EF146515_1(EF146515|pid:none) Populus trichocarpa clone WS0118_N... 74 3e-12
BT080517_1(BT080517|pid:none) Caligus clemensi clone ccle-evs-51... 74 3e-12
BT078048_1(BT078048|pid:none) Lepeophtheirus salmonis clone lsal... 74 3e-12
AF384039_1(AF384039|pid:none) Zea mays silencing group B protein... 71 3e-11
AK005143_1(AK005143|pid:none) Mus musculus adult male cerebellum... 70 6e-11
AC006550_2(AC006550|pid:none) Arabidopsis thaliana chromosome 1 ... 69 8e-11
FN392322_357(FN392322|pid:none) Pichia pastoris GS115 chromosome... 69 8e-11
AP007155_443(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 69 1e-10
AC097368_13(AC097368|pid:none) Oryza sativa chromosome 3 BAC OSJ... 69 1e-10
AC115592_11(AC115592|pid:none) Dictyostelium discoideum chromoso... 69 1e-10
AM910984_40(AM910984|pid:none) Plasmodium knowlesi strain H chro... 68 2e-10
AY170474_1(AY170474|pid:none) Cercospora zeae-maydis N-terminal ... 65 1e-09
CU928170_587(CU928170|pid:none) Kluyveromyces thermotolerans str... 65 1e-09
EF083955_1(EF083955|pid:none) Picea sitchensis clone WS0281_F22 ... 65 1e-09
FN357484_9(FN357484|pid:none) Schistosoma mansoni genome sequenc... 65 2e-09
(Q58925) RecName: Full=Uncharacterized N-acetyltransferase MJ153... 64 3e-09
BC163228_1(BC163228|pid:none) Danio rerio cDNA clone MGC:194204 ... 64 4e-09
AE014134_2399(AE014134|pid:none) Drosophila melanogaster chromos... 64 4e-09
AX886070_1(AX886070|pid:none) Sequence 1933 from Patent EP1033401. 64 4e-09
AP007155_707(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 63 6e-09
CP000254_2471(CP000254|pid:none) Methanospirillum hungatei JF-1,... 63 6e-09
FM992688_615(FM992688|pid:none) Candida dubliniensis CD36 chromo... 63 8e-09
AP006878_2215(AP006878|pid:none) Thermococcus kodakarensis KOD1 ... 62 1e-08
BC172029_1(BC172029|pid:none) Mus musculus N-acetyltransferase 1... 62 1e-08
GM015893_350(GM015893|pid:none) Sequence 723 from Patent EP19234... 62 1e-08
BC157931_1(BC157931|pid:none) Mus musculus N-acetyltransferase 1... 62 1e-08
AK304257_1(AK304257|pid:none) Homo sapiens cDNA FLJ55379 complet... 62 1e-08
(Q8CES0) RecName: Full=N-acetyltransferase MAK3 homolog; ... 62 1e-08
AX455884_1(AX455884|pid:none) Sequence 5 from Patent WO0196548. 62 1e-08
AE009950_267(AE009950|pid:none) Pyrococcus furiosus DSM 3638, co... 62 1e-08
AJ248288_132(AJ248288|pid:none) Pyrococcus abyssi complete genom... 61 2e-08
AX455882_1(AX455882|pid:none) Sequence 3 from Patent WO0196548. 61 3e-08
CP000855_1425(CP000855|pid:none) Thermococcus onnurineus NA1, co... 61 3e-08
CP000496_998(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 60 4e-08
AE014298_194(AE014298|pid:none) Drosophila melanogaster chromoso... 60 5e-08
CP000559_8(CP000559|pid:none) Methanocorpusculum labreanum Z, co... 60 5e-08
AK015640_1(AK015640|pid:none) Mus musculus adult male testis cDN... 60 6e-08
A71455(A71455) probable acetyltransferase - Pyrococcus horikoshi... 59 1e-07
(O74311) RecName: Full=N-terminal acetyltransferase C complex ca... 58 2e-07
CR382137_349(CR382137|pid:none) Debaryomyces hansenii strain CBS... 57 3e-07
CU928169_629(CU928169|pid:none) Kluyveromyces thermotolerans str... 57 3e-07
CP000504_992(CP000504|pid:none) Pyrobaculum islandicum DSM 4184,... 57 4e-07
CP001331_247(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 57 4e-07
BX950229_1351(BX950229|pid:none) Methanococcus maripaludis strai... 57 5e-07
CR382129_443(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 57 5e-07
AC003028_6(AC003028|pid:none) Arabidopsis thaliana chromosome 2 ... 56 7e-07
DQ200361_1(DQ200361|pid:none) Solanum tuberosum clone 054D08 unk... 56 7e-07
CP000600_296(CP000600|pid:none) Ostreococcus lucimarinus CCE9901... 56 7e-07
CP000505_809(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 56 9e-07
AF016450_12(AF016450|pid:none) Caenorhabditis elegans cosmid B02... 56 9e-07
AE016817_438(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 55 2e-06
AM455523_2(AM455523|pid:none) Vitis vinifera contig VV78X051777.... 55 2e-06
FM992691_152(FM992691|pid:none) Candida dubliniensis CD36 chromo... 55 2e-06
CP000867_1309(CP000867|pid:none) Methanococcus maripaludis C6, c... 55 2e-06
(Q03503) RecName: Full=N-terminal acetyltransferase C complex ca... 55 2e-06
AY814134_1(AY814134|pid:none) Schistosoma japonicum SJCHGC04482 ... 55 2e-06
AM502243_2(AM502243|pid:none) Leishmania infantum chromosome 25. 55 2e-06
EU967546_1(EU967546|pid:none) Zea mays clone 304366 retrotranspo... 54 4e-06
AM494962_2(AM494962|pid:none) Leishmania braziliensis chromosome... 54 5e-06
CR382136_880(CR382136|pid:none) Debaryomyces hansenii chromosome... 54 5e-06
CP000562_2356(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 54 5e-06
CP000609_226(CP000609|pid:none) Methanococcus maripaludis C5, co... 54 5e-06
FN357414_27(FN357414|pid:none) Schistosoma mansoni genome sequen... 53 6e-06
BX088700_28(BX088700|pid:none) DNA centromeric region sequence f... 53 8e-06
AY816161_1(AY816161|pid:none) Schistosoma japonicum SJCHGC03286 ... 52 1e-05
CP000678_893(CP000678|pid:none) Methanobrevibacter smithii ATCC ... 52 1e-05
CP000411_1257(CP000411|pid:none) Oenococcus oeni PSU-1, complete... 52 1e-05
AL590446_46(AL590446|pid:none) chromosome VI of strain GB-M1 of ... 52 1e-05
AE010299_4513(AE010299|pid:none) Methanosarcina acetivorans str.... 52 1e-05
CR382122_461(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 52 2e-05
AE008384_1293(AE008384|pid:none) Methanosarcina mazei strain Goe... 52 2e-05
CP000561_943(CP000561|pid:none) Pyrobaculum calidifontis JCM 115... 51 2e-05
CU928175_653(CU928175|pid:none) Zygosaccharomyces rouxii strain ... 51 3e-05
CP000099_935(CP000099|pid:none) Methanosarcina barkeri str. Fusa... 51 3e-05
FN392321_237(FN392321|pid:none) Pichia pastoris GS115 chromosome... 50 4e-05
AP009049_681(AP009049|pid:none) Clostridium kluyveri NBRC 12016 ... 50 4e-05
AY596297_1915(AY596297|pid:none) Haloarcula marismortui ATCC 430... 50 5e-05
BA000022_1211(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 50 7e-05
AM406671_304(AM406671|pid:none) Lactococcus lactis subsp. cremor... 49 9e-05
AE014134_2398(AE014134|pid:none) Drosophila melanogaster chromos... 49 9e-05
CP000422_1393(CP000422|pid:none) Pediococcus pentosaceus ATCC 25... 49 9e-05
BT035175_1(BT035175|pid:none) Zea mays full-length cDNA clone ZM... 49 9e-05
CP000922_205(CP000922|pid:none) Anoxybacillus flavithermus WK1, ... 49 9e-05
AK296372_1(AK296372|pid:none) Homo sapiens cDNA FLJ50785 complet... 49 1e-04
BC054060_1(BC054060|pid:none) Mus musculus N-acetyltransferase 1... 49 1e-04
CP000790_853(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 chr... 48 2e-04
AE008691_496(AE008691|pid:none) Thermoanaerobacter tengcongensis... 48 2e-04
AP008937_305(AP008937|pid:none) Lactobacillus fermentum IFO 3956... 48 3e-04
CP000462_537(CP000462|pid:none) Aeromonas hydrophila subsp. hydr... 47 3e-04
AE000657_411(AE000657|pid:none) Aquifex aeolicus VF5, complete g... 47 3e-04
AK167141_1(AK167141|pid:none) Mus musculus blastocyst blastocyst... 47 4e-04
BT047729_1(BT047729|pid:none) Salmo salar clone ssal-eve-571-272... 47 4e-04
CP001098_196(CP001098|pid:none) Halothermothrix orenii H 168, co... 47 4e-04
CP001404_680(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51,... 47 4e-04
(Q6DBY2) RecName: Full=N-acetyltransferase NAT13; EC=2.... 47 4e-04
(Q6GP53) RecName: Full=N-acetyltransferase NAT13; EC=2.... 47 4e-04
BT047876_1(BT047876|pid:none) Salmo salar clone ssal-evd-573-328... 47 4e-04
CP000562_1932(CP000562|pid:none) Methanoculleus marisnigri JR1, ... 47 4e-04
AE000782_727(AE000782|pid:none) Archaeoglobus fulgidus DSM 4304,... 47 4e-04
BC169000_1(BC169000|pid:none) Rattus norvegicus N-acetyltransfer... 47 4e-04
AK011160_1(AK011160|pid:none) Mus musculus 10 days embryo whole ... 47 4e-04
BT083351_1(BT083351|pid:none) Anoplopoma fimbria clone afim-evh-... 47 6e-04
CP001399_2037(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 46 7e-04
A84407(A84407) Pab N-terminal acetyltransferase [imported] - Hal... 46 7e-04
CP001400_1888(CP001400|pid:none) Sulfolobus islandicus M.14.25, ... 46 7e-04
CP000416_579(CP000416|pid:none) Lactobacillus brevis ATCC 367, c... 46 7e-04
(Q54MP9) RecName: Full=N-acetyltransferase MAK3 homolog; ... 46 0.001
AL590447_167(AL590447|pid:none) chromosome VII of strain GB-M1 o... 46 0.001
AJ563465_1(AJ563465|pid:none) Crassostrea gigas partial mRNA for... 46 0.001
CP000923_476(CP000923|pid:none) Thermoanaerobacter sp. X514, com... 46 0.001
CP000414_1692(CP000414|pid:none) Leuconostoc mesenteroides subsp... 45 0.001
BA000011_14(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA, ... 45 0.001
CR940353_565(CR940353|pid:none) Theileria annulata strain Ankara... 45 0.001
AM461480_3(AM461480|pid:none) Vitis vinifera contig VV78X276202.... 45 0.002
AM466840_4(AM466840|pid:none) Vitis vinifera contig VV78X103164.... 44 0.003
CP001581_3526(CP001581|pid:none) Clostridium botulinum A2 str. K... 44 0.005
DQ443230_1(DQ443230|pid:none) Bombyx mori N-acetyltransferase mR... 43 0.006
AK118749_1(AK118749|pid:none) Arabidopsis thaliana At1g03650 mRN... 43 0.006
AM286690_640(AM286690|pid:none) Alcanivorax borkumensis SK2, com... 43 0.006
CP000959_1600(CP000959|pid:none) Burkholderia cenocepacia MC0-3 ... 43 0.006
CP000086_1413(CP000086|pid:none) Burkholderia thailandensis E264... 43 0.006
CP000962_3303(CP000962|pid:none) Clostridium botulinum A3 str. L... 43 0.008
CP000503_3640(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 42 0.011
CP001615_2074(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 42 0.014
AX971589_1(AX971589|pid:none) Sequence 2392 from Patent EP1104808. 42 0.014
AK109295_1(AK109295|pid:none) Oryza sativa Japonica Group cDNA c... 42 0.014
AE017340_2149(AE017340|pid:none) Idiomarina loihiensis L2TR, com... 42 0.014
U92874_1(U92874|pid:none) Sulfolobus shibatae N-terminal acetyl ... 42 0.014
CP000568_1753(CP000568|pid:none) Clostridium thermocellum ATCC 2... 42 0.018
EU968609_1(EU968609|pid:none) Zea mays clone 322805 acetyltransf... 42 0.018
CP001280_1143(CP001280|pid:none) Methylocella silvestris BL2, co... 42 0.018
CP001022_2757(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 42 0.018
CP000891_173(CP000891|pid:none) Shewanella baltica OS195, comple... 41 0.024
AE015927_2196(AE015927|pid:none) Clostridium tetani E88, complet... 41 0.024
BX571965_937(BX571965|pid:none) Burkholderia pseudomallei strain... 41 0.024
AE016825_908(AE016825|pid:none) Chromobacterium violaceum ATCC 1... 41 0.024
EU960231_1(EU960231|pid:none) Zea mays clone 222762 unknown mRNA. 41 0.024
AC079888_14(AC079888|pid:none) Oryza sativa chromosome 10 BAC OS... 41 0.024
CP000010_1698(CP000010|pid:none) Burkholderia mallei ATCC 23344 ... 41 0.024
CP000769_2453(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 41 0.031
CP000379_2395(CP000379|pid:none) Burkholderia cenocepacia AU 105... 41 0.031
CP000382_1110(CP000382|pid:none) Clostridium novyi NT, complete ... 40 0.041
CP001322_4599(CP001322|pid:none) Desulfatibacillum alkenivorans ... 40 0.041
CP000076_3056(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 40 0.041
U40420_2(U40420|pid:none) Caenorhabditis elegans cosmid F40F4, c... 40 0.041
AP009324_2036(AP009324|pid:none) Staphylococcus aureus subsp. au... 40 0.041
CR954253_1565(CR954253|pid:none) Lactobacillus delbrueckii subsp... 40 0.053
AE000666_773(AE000666|pid:none) Methanothermobacter thermautotro... 40 0.053
AJ938182_1935(AJ938182|pid:none) Staphylococcus aureus RF122 com... 40 0.053
CP001408_3263(CP001408|pid:none) Burkholderia pseudomallei MSHR3... 40 0.069
CP001348_791(CP001348|pid:none) Clostridium cellulolyticum H10, ... 40 0.069
CP000724_787(CP000724|pid:none) Alkaliphilus metalliredigens QYM... 40 0.069
CP000469_170(CP000469|pid:none) Shewanella sp. ANA-3, complete g... 40 0.069
CP000010_1741(CP000010|pid:none) Burkholderia mallei ATCC 23344 ... 40 0.069
CP000124_3140(CP000124|pid:none) Burkholderia pseudomallei 1710b... 40 0.069
CP000152_190(CP000152|pid:none) Burkholderia sp. 383 chromosome ... 40 0.069
CP001287_163(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 40 0.069
CP000572_3129(CP000572|pid:none) Burkholderia pseudomallei 1106a... 40 0.069
AY864330_60(AY864330|pid:none) Chrysodeixis chalcites nucleopoly... 40 0.069
CP001331_255(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 39 0.091
EU961085_1(EU961085|pid:none) Zea mays clone 232718 pre-mRNA-spl... 39 0.091
AE004969_27(AE004969|pid:none) Neisseria gonorrhoeae FA 1090, co... 39 0.12
EU973162_1(EU973162|pid:none) Zea mays clone 394310 unknown mRNA. 39 0.12
CP000444_166(CP000444|pid:none) Shewanella sp. MR-7, complete ge... 39 0.12
BA000022_549(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA, ... 39 0.12
CP000446_170(CP000446|pid:none) Shewanella sp. MR-4, complete ge... 39 0.12
AP009386_2001(AP009386|pid:none) Burkholderia multivorans ATCC 1... 39 0.12
BT077903_1(BT077903|pid:none) Lepeophtheirus salmonis clone lsal... 39 0.15
AE008691_204(AE008691|pid:none) Thermoanaerobacter tengcongensis... 39 0.15
CP000559_750(CP000559|pid:none) Methanocorpusculum labreanum Z, ... 39 0.15
CP000502_209(CP000502|pid:none) Pichia stipitis CBS 6054 chromos... 39 0.15
CP000941_1636(CP000941|pid:none) Xylella fastidiosa M12, complet... 39 0.15
CU914168_275(CU914168|pid:none) Ralstonia solanacearum strain IP... 38 0.20
BT066227_1(BT066227|pid:none) Zea mays full-length cDNA clone ZM... 38 0.20
AE014299_192(AE014299|pid:none) Shewanella oneidensis MR-1, comp... 38 0.20
AE016828_697(AE016828|pid:none) Coxiella burnetii RSA 493, compl... 38 0.20
CP001019_1071(CP001019|pid:none) Coxiella burnetii CbuG_Q212, co... 38 0.20
CP000606_130(CP000606|pid:none) Shewanella loihica PV-4, complet... 38 0.20
CP000826_647(CP000826|pid:none) Serratia proteamaculans 568, com... 38 0.20
AP006627_866(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, co... 38 0.20
CP000480_4396(CP000480|pid:none) Mycobacterium smegmatis str. MC... 38 0.26
AE017226_35(AE017226|pid:none) Treponema denticola ATCC 35405, c... 38 0.26
AL935253_301(AL935253|pid:none) Lactobacillus plantarum strain W... 38 0.26
CP000431_6125(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 37 0.34
AE015929_1651(AE015929|pid:none) Staphylococcus epidermidis ATCC... 37 0.34
CP000656_4900(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 37 0.45
CP000033_234(CP000033|pid:none) Lactobacillus acidophilus NCFM, ... 37 0.45
AP008934_828(AP008934|pid:none) Staphylococcus saprophyticus sub... 37 0.45
CP000589_387(CP000589|pid:none) Ostreococcus lucimarinus CCE9901... 37 0.45
AC126792_20(AC126792|pid:none) Medicago truncatula clone mth2-8o... 37 0.45
CP000790_1911(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 ch... 37 0.45
EU162046_1(EU162046|pid:none) Halobacillus halophilus strain DSM... 37 0.59
CP000951_1583(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 37 0.59
CP000386_798(CP000386|pid:none) Rubrobacter xylanophilus DSM 994... 37 0.59
CP001349_121(CP001349|pid:none) Methylobacterium nodulans ORS 20... 37 0.59
(Q6PR33) RecName: Full=L-2,4-diaminobutyric acid acetyltransfera... 37 0.59
CP000931_4124(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 37 0.59
CP000075_4206(CP000075|pid:none) Pseudomonas syringae pv. syring... 36 0.77
CP000023_1640(CP000023|pid:none) Streptococcus thermophilus LMG ... 36 0.77
AM114193_1689(AM114193|pid:none) Uncultured methanogenic archaeo... 36 0.77
BT057101_1(BT057101|pid:none) Salmo salar clone ssal-eve-577-295... 36 0.77
AE007317_1115(AE007317|pid:none) Streptococcus pneumoniae R6, co... 36 0.77
CP000419_1492(CP000419|pid:none) Streptococcus thermophilus LMD-... 36 0.77
AL445063_57(AL445063|pid:none) Thermoplasma acidophilum complete... 36 0.77
CP000903_2663(CP000903|pid:none) Bacillus weihenstephanensis KBA... 36 0.77
CR936257_1984(CR936257|pid:none) Natronomonas pharaonis DSM 2160... 36 1.0
FP236842_612(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/96... 36 1.0
AK071368_1(AK071368|pid:none) Oryza sativa Japonica Group cDNA c... 36 1.0
AP008231_1550(AP008231|pid:none) Synechococcus elongatus PCC 630... 36 1.0
CP000471_1870(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 36 1.0
CP000511_1469(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 36 1.0
CP000441_1576(CP000441|pid:none) Burkholderia ambifaria AMMD chr... 36 1.0
CP000936_1234(CP000936|pid:none) Streptococcus pneumoniae Hungar... 36 1.0
AM412317_3172(AM412317|pid:none) Clostridium botulinum A str. AT... 35 1.3
AE003849_438(AE003849|pid:none) Xylella fastidiosa 9a5c, complet... 35 1.3
CP000325_735(CP000325|pid:none) Mycobacterium ulcerans Agy99, co... 35 1.3
CP001327_631(CP001327|pid:none) Micromonas sp. RCC299 chromosome... 35 1.3
CP000100_2558(CP000100|pid:none) Synechococcus elongatus PCC 794... 35 1.3
CP001101_2223(CP001101|pid:none) Chlorobium phaeobacteroides BS1... 35 1.7
CP001330_450(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 35 1.7
D88359_1(D88359|pid:none) Halomonas elongata ectB, ectA, ectC ge... 35 1.7
BA000011_1240(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA... 35 1.7
CP001104_367(CP001104|pid:none) Eubacterium eligens ATCC 27750, ... 35 2.2
CP001600_520(CP001600|pid:none) Edwardsiella ictaluri 93-146, co... 35 2.2
AE007869_235(AE007869|pid:none) Agrobacterium tumefaciens str. C... 35 2.2
(Q9ZEU8) RecName: Full=L-2,4-diaminobutyric acid acetyltransfera... 35 2.2
AE017262_645(AE017262|pid:none) Listeria monocytogenes str. 4b F... 35 2.2
CP000285_1863(CP000285|pid:none) Chromohalobacter salexigens DSM... 35 2.2
EF086704_1(EF086704|pid:none) Picea sitchensis clone WS02732_A06... 35 2.2
CP000863_3425(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 35 2.2
CP000521_3533(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 35 2.2
CP000921_918(CP000921|pid:none) Streptococcus pneumoniae Taiwan1... 35 2.2
AE016879_2702(AE016879|pid:none) Bacillus anthracis str. Ames, c... 34 2.9
CP000820_4050(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 34 2.9
CP000077_1110(CP000077|pid:none) Sulfolobus acidocaldarius DSM 6... 34 2.9
AF355189_2(AF355189|pid:none) Pseudomonas aeruginosa integron In... 34 2.9
AE017194_2161(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 34 2.9
L06157_2(L06157|pid:none) Pseudomonas aeruginosa aminoglycoside ... 34 3.8
CP000407_161(CP000407|pid:none) Streptococcus suis 05ZYH33, comp... 34 3.8
AM778957_106(AM778957|pid:none) Microcystis aeruginosa PCC 7806 ... 34 3.8
CR954209_413(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 34 3.8
CP001230_1537(CP001230|pid:none) Persephonella marina EX-H1, com... 34 3.8
CP001068_90(CP001068|pid:none) Ralstonia pickettii 12J chromosom... 33 5.0
(Q39WU7) RecName: Full=Molybdenum cofactor biosynthesis protein ... 33 5.0
AY935521_1(AY935521|pid:none) Virgibacillus salexigens EctA (ect... 33 5.0
CT971583_1534(CT971583|pid:none) Synechococcus WH7803 complete g... 33 5.0
(Q49857) RecName: Full=Uncharacterized protein ML0378; Flags: Pr... 33 6.5
CP000462_1592(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 33 6.5
AE016877_2762(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 33 6.5
EF486239_1(EF486239|pid:none) Chromohalobacter sp. NJS-2 ectABC ... 33 6.5
FM954972_2345(FM954972|pid:none) Vibrio splendidus LGP32 chromos... 33 6.5
CU234118_3885(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 33 8.5
CP000879_429(CP000879|pid:none) Petrotoga mobilis SJ95, complete... 33 8.5
CP001365_1992(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 33 8.5
AP009552_302(AP009552|pid:none) Microcystis aeruginosa NIES-843 ... 33 8.5
AE010299_2740(AE010299|pid:none) Methanosarcina acetivorans str.... 33 8.5
AE003852_643(AE003852|pid:none) Vibrio cholerae O1 biovar eltor ... 33 8.5
CP000852_366(CP000852|pid:none) Caldivirga maquilingensis IC-167... 33 8.5
CP000393_2754(CP000393|pid:none) Trichodesmium erythraeum IMS101... 33 8.5
AE009949_1773(AE009949|pid:none) Streptococcus pyogenes MGAS8232... 33 8.5
AP009044_261(AP009044|pid:none) Corynebacterium glutamicum R DNA... 33 8.5
CP000744_4566(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 33 8.5

>AC115598_24(AC115598|pid:none) Dictyostelium discoideum chromosome
2 map 581427-735498 strain AX4, complete sequence.
Length = 203

Score = 344 bits (883), Expect = 1e-93
Identities = 174/191 (91%), Positives = 174/191 (91%)
Frame = +1

Query: 1 IRPCQIGDLMSMQNANLTCLPENYQMKYYLYHFLTWPQTSFVAEDDKGNVVGYVLAKIDE 180
IRPCQIGDLMSMQNANLTCLPENYQMKYYLYHFLTWPQTSFV EDDKGNVVGYVLAKIDE
Sbjct: 4 IRPCQIGDLMSMQNANLTCLPENYQMKYYLYHFLTWPQTSFVDEDDKGNVVGYVLAKIDE 63

Query: 181 NEPKRGHITSLAVLRSQRKLGIATKLMKQAEVALLEVYDADCVSLHVRKSNRAAFSLYHE 360
NEPKRGHITSLAVLRSQRKLGIATKLMKQAEVALLEVYDADCVSLHVRKSNRAAFSLYHE
Sbjct: 64 NEPKRGHITSLAVLRSQRKLGIATKLMKQAEVALLEVYDADCVSLHVRKSNRAAFSLYHE 123

Query: 361 VLKFKIDEIEKEYYGDKEDAYSMVLYLXXXXXXXXXXXXXXXXINKAAKESIEAAKRANE 540
VLKFKIDEIEKEYYGDKEDAYSMVLYL INKAAKESIEAAKRANE
Sbjct: 124 VLKFKIDEIEKEYYGDKEDAYSMVLYLKPEVEEEKEREKQLEKINKAAKESIEAAKRANE 183

Query: 541 EPKPVSNVIHG 573
EPKPVSNVIHG
Sbjct: 184 EPKPVSNVIHG 194

Lambda K H
0.317 0.133 0.380

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 649,334,796
Number of extensions: 9823806
Number of successful extensions: 28452
Number of sequences better than 10.0: 361
Number of HSP's gapped: 28230
Number of HSP's successfully gapped: 366
Length of query: 207
Length of database: 1,040,966,779
Length adjustment: 123
Effective length of query: 84
Effective length of database: 646,839,724
Effective search space: 54334536816
Effective search space used: 54334536816
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.76 gvh: 0.44 alm: 0.46 top: 0.53 tms: 0.00 mit: 0.23 mip: 0.02
nuc: 0.00 erl: 0.00 erm: 0.60 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: nuclear
32.0 %: cytoplasmic
12.0 %: mitochondrial
8.0 %: vacuolar
4.0 %: endoplasmic reticulum

>> prediction for Contig-U06794-1 is nuc

VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0