Contig-U01385-1
Contig ID Contig-U01385-1
Contig update 2001. 8.29
Contig sequence
>Contig-U01385-1 (Contig-U01385-1Q) /CSM_Contig/Contig-U01385-1Q.Seq.d
GTTTAGATCAATCATCAACATTTTGGGAATGTATTGCATGTCAAAATAAG
AGATTAGTTGATTCAGTATTTTTAGATGAAAATATTAGTGAAAAGGTTGT
CAATGATTTGACTAATTTCATACATGGAAAGAAATGGTATACCGATACTG
GTGTACCTTATAGACGTGGTTATTTATTGTATGGTCCACCGGGATCGGGC
AAAACTTCATTT----------CAATCAATTCAAAATTGGAAAATCCTCA
AATTAGTACCGCTCAATTACAAGGTTGGTCATTATTCATCGTAATTCACC
TTTAAATCTTTTACCAACTTGTGATGATTTCATTACTCAATGTACATCTG
AAACTACTTCAAATGATAAAATTACAAAAGAAATGTTAGATGATGAAATT
AAATCTTATGATGATGATGATGAAGAAGAATCAATTAATAATAATATTAA
ATTAAATAAAAAATATAATAGTAATGGTAATAATAATTATCAAAAAGATG
ATAAAAAACCAAGTGTTTTATCACCTTCCAATTCAGAATCTTTAGATAAT
AGAAATGATGATAATGAAGAAATTTATGAAGACAATAATAATAATGAACT
TTTTGATGGTAAGTATACTGGTAACTCAACAACTAGAAAAAGAAAAGTTT
AAAAAGGAAAAAAAAAATAGATTGAAAAAAAAAGAATATCTTTTAGAATA
TCTTTTTGTAAAATAAATAAATAAATAAATAATAACTATAATAAAAAATA
AAATAAAAATCTAATTTATTAATAATATAAAAAAAA

Gap gap included
Contig length 776
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 4917711
End point 4918429
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 4
Link to clone list U01385
List of clone(s)

est1=SLI271F,1,213
est2=SLI716F,1,122
est3=SLI271Z,214,778
est4=SLI716Z,302,778
Translated Amino Acid sequence
LDQSSTFWECIACQNKRLVDSVFLDENISEKVVNDLTNFIHGKKWYTDTGVPYRRGYLLY
GPPGSGKTSF---

---INSKLENPQISTAQLQGWSLFIVIHL*ifyqlvmisllnvhlkllqmiklqkkc*mm
klnlmmmmmkknqliiiln*ikniivmviiiikkmiknqvfyhlpiqnl*iiemmimkkf
mktiiimnflmvsilvtqqlekekfkkekknrlkkkeylleylfvk*ink*iitiiknki
ki*finnikk


Translated Amino Acid sequence (All Frames)
Frame A:
v*inhqhfgnvlhvkird*liqyf*mkilvkrlsmi*lisymerngipilvylidvviyc
mvhrdraklh---

---qsiqnwkilklvplnykvghyss*ftfksftnl**fhysmyi*nyfk**nykrnvr*
*n*il*****rrin***y*ik*ki***w***lskr**ktkcfitfqfrifr**k****rn
l*rq****tf*w*vyw*lnn*kkkslkrkkkid*kkknif*nifl*nk*ink**l**kik
*ksnllii*kk

Frame B:
frsiinilgmycmsk*eis*fsifr*ky**kgcq*fd*fhtwkemvyrywctl*twlfiv
wstgigqnfi---

---nqfkigkssn*yrsitrlviihrnsplnllptcddfitqctsettsndkitkemldd
eiksyddddeeesinnniklnkkynsngnnnyqkddkkpsvlspsnsesldnrnddneei
yednnnnelfdgkytgnsttrkrkv*kgkkk*iekkrisfrisfckink*innnynkk*n
knliy**ykk

Frame C:
LDQSSTFWECIACQNKRLVDSVFLDENISEKVVNDLTNFIHGKKWYTDTGVPYRRGYLLY
GPPGSGKTSF---

---INSKLENPQISTAQLQGWSLFIVIHL*ifyqlvmisllnvhlkllqmiklqkkc*mm
klnlmmmmmkknqliiiln*ikniivmviiiikkmiknqvfyhlpiqnl*iiemmimkkf
mktiiimnflmvsilvtqqlekekfkkekknrlkkkeylleylfvk*ink*iitiiknki
ki*finnikk

own update 2004. 6. 7
Homology vs CSM-cDNA
Query= Contig-U01385-1 (Contig-U01385-1Q)
/CSM_Contig/Contig-U01385-1Q.Seq.d
(786 letters)

Database: CSM
8361 sequences; 7,895,291 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U01385-1 (Contig-U01385-1Q) /CSM_Contig/Conti... 789 0.0
Contig-U14703-1 (Contig-U14703-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U14684-1 (Contig-U14684-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U14570-1 (Contig-U14570-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U11931-1 (Contig-U11931-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U11385-1 (Contig-U11385-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U11339-1 (Contig-U11339-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U11145-1 (Contig-U11145-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U05003-1 (Contig-U05003-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U10767-1 (Contig-U10767-1Q) /CSM_Contig/Conti... 40 0.005

>Contig-U01385-1 (Contig-U01385-1Q) /CSM_Contig/Contig-U01385-1Q.Seq.d
Length = 786

Score = 789 bits (398), Expect = 0.0
Identities = 428/428 (100%)
Strand = Plus / Plus


Query: 1 gtttagatcaatcatcaacattttgggaatgtattgcatgtcaaaataagagattagttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtttagatcaatcatcaacattttgggaatgtattgcatgtcaaaataagagattagttg 60


Query: 61 attcagtatttttagatgaaaatattagtgaaaaggttgtcaatgatttgactaatttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attcagtatttttagatgaaaatattagtgaaaaggttgtcaatgatttgactaatttca 120


Query: 121 tacatggaaagaaatggtataccgatactggtgtaccttatagacgtggttatttattgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacatggaaagaaatggtataccgatactggtgtaccttatagacgtggttatttattgt 180


Query: 181 atggtccaccgggatcgggcaaaacttcatttnnnnnnnnnncaatcaattcaaaattgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atggtccaccgggatcgggcaaaacttcatttnnnnnnnnnncaatcaattcaaaattgg 240


Query: 241 aaaatcctcaaattagtaccgctcaattacaaggttggtcattattcatcgtaattcacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaatcctcaaattagtaccgctcaattacaaggttggtcattattcatcgtaattcacc 300


Query: 301 tttaaatcttttaccaacttgtgatgatttcattactcaatgtacatctgaaactacttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttaaatcttttaccaacttgtgatgatttcattactcaatgtacatctgaaactacttc 360


Query: 361 aaatgataaaattacaaaagaaatgttagatgatgaaattaaatcttatgatgatgatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaatgataaaattacaaaagaaatgttagatgatgaaattaaatcttatgatgatgatga 420


Query: 421 tgaagaag 428
||||||||
Sbjct: 421 tgaagaag 428


Score = 254 bits (128), Expect = 2e-67
Identities = 128/128 (100%)
Strand = Plus / Plus


Query: 509 ccaagtgttttatcaccttccaattcagaatctttagataatagaaatgatgataatgaa 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ccaagtgttttatcaccttccaattcagaatctttagataatagaaatgatgataatgaa 568


Query: 569 gaaatttatgaagacaataataataatgaactttttgatggtaagtatactggtaactca 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gaaatttatgaagacaataataataatgaactttttgatggtaagtatactggtaactca 628


Query: 629 acaactag 636
||||||||
Sbjct: 629 acaactag 636


Score = 50.1 bits (25), Expect = 5e-06
Identities = 25/25 (100%)
Strand = Plus / Plus


Query: 684 gaatatcttttagaatatctttttg 708
|||||||||||||||||||||||||
Sbjct: 684 gaatatcttttagaatatctttttg 708


>Contig-U14703-1 (Contig-U14703-1Q) /CSM_Contig/Contig-U14703-1Q.Seq.d
Length = 932

Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Minus


Query: 408 atgatgatgatgatgaagaag 428
|||||||||||||||||||||
Sbjct: 454 atgatgatgatgatgaagaag 434


Score = 34.2 bits (17), Expect = 0.30
Identities = 20/21 (95%)
Strand = Plus / Minus


Query: 408 atgatgatgatgatgaagaag 428
|||||||||||||||| ||||
Sbjct: 457 atgatgatgatgatgatgaag 437


Score = 32.2 bits (16), Expect = 1.2
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 408 atgatgatgatgatga 423
||||||||||||||||
Sbjct: 463 atgatgatgatgatga 448


Score = 32.2 bits (16), Expect = 1.2
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 408 atgatgatgatgatga 423
||||||||||||||||
Sbjct: 460 atgatgatgatgatga 445


Score = 30.2 bits (15), Expect = 4.8
Identities = 15/15 (100%)
Strand = Plus / Minus


Query: 409 tgatgatgatgatga 423
|||||||||||||||
Sbjct: 465 tgatgatgatgatga 451


Score = 30.2 bits (15), Expect = 4.8
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 584 aataataataatgaa 598
|||||||||||||||
Sbjct: 17 aataataataatgaa 31


Score = 30.2 bits (15), Expect = 4.8
Identities = 18/19 (94%)
Strand = Plus / Minus


Query: 408 atgatgatgatgatgaaga 426
||||||||||||| |||||
Sbjct: 451 atgatgatgatgaagaaga 433


>Contig-U14684-1 (Contig-U14684-1Q) /CSM_Contig/Contig-U14684-1Q.Seq.d
Length = 1466

Score = 42.1 bits (21), Expect = 0.001
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 408 atgatgatgatgatgaagaag 428
|||||||||||||||||||||
Sbjct: 1211 atgatgatgatgatgaagaag 1231


Score = 30.2 bits (15), Expect = 4.8
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 414 atgatgatgaagaag 428
|||||||||||||||
Sbjct: 1283 atgatgatgaagaag 1297


Score = 30.2 bits (15), Expect = 4.8
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 410 gatgatgatgatgaagaag 428
|||||||||||||| ||||
Sbjct: 1210 gatgatgatgatgatgaag 1228


Score = 30.2 bits (15), Expect = 4.8
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 408 atgatgatgatgatgaaga 426
||||||||||||| |||||
Sbjct: 1214 atgatgatgatgaagaaga 1232


Database: CSM
Posted date: Jun 7, 2004 8:33 AM
Number of letters in database: 7,895,291
Number of sequences in database: 8361

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 32,168
Number of Sequences: 8361
Number of extensions: 32168
Number of successful extensions: 5277
Number of sequences better than 10.0: 739
length of query: 786
length of database: 7,895,291
effective HSP length: 16
effective length of query: 770
effective length of database: 7,761,515
effective search space: 5976366550
effective search space used: 5976366550
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 4.26
Homology vs DNA
Query= Contig-U01385-1 (Contig-U01385-1Q) /CSM_Contig/Contig-U01385-1Q.Seq.d
(786 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU053263) Dictyostelium discoideum slug cDNA, clone SLI271. 274 e-145 3
(AU062194) Dictyostelium discoideum slug cDNA, clone SLI271. 420 e-113 1
(AU053469) Dictyostelium discoideum slug cDNA, clone SLI716. 246 7e-91 3
(AU062252) Dictyostelium discoideum slug cDNA, clone SLI716. 242 2e-59 1
(DY887218) CeleSEQ3144 Cunninghamella elegans pBluescript (E... 56 0.002 1
(AM431517) Vitis vinifera contig VV78X123253.10, whole genom... 38 0.022 2
(DR987932) JGI_AOSF1170.fwd AOSF Montastraea faveolata adult... 38 0.027 2
(AC004688) Plasmodium falciparum chromosome 12 clone PFYAC69... 36 0.078 6
(DY895449) CeleSEQ15285 Cunninghamella elegans pBluescript (... 38 0.12 3
(ED693468) GM_WBb0031M01.f GM_WBb Glycine max genomic clone ... 50 0.13 1
(AC177027) Strongylocentrotus purpuratus clone R3-37M11, WOR... 38 0.29 2
(AC180183) Strongylocentrotus purpuratus clone R3-4001O12, W... 38 0.30 2
(AE014847) Plasmodium falciparum 3D7 chromosome 12, section ... 36 0.43 5
(AC201098) Strongylocentrotus purpuratus clone R3-13H19, WOR... 48 0.51 1
(AC180089) Strongylocentrotus purpuratus clone R3-4008L4, WO... 48 0.51 1
(AC176380) Strongylocentrotus purpuratus clone R3-3045A7, WO... 48 0.51 1
(BW317377) Ciona intestinalis cDNA, clone:ciht035e02, 5' end... 48 0.51 1
(BW317355) Ciona intestinalis cDNA, clone:ciht035c24, 5' end... 48 0.51 1
(BW307725) Ciona intestinalis cDNA, clone:ciht017j13, 5' end... 48 0.51 1
(BW186160) Ciona intestinalis cDNA, clone:rciht035e02, 3' en... 48 0.51 1
(BW186138) Ciona intestinalis cDNA, clone:rciht035c24, 3' en... 48 0.51 1
(BW183722) Ciona intestinalis cDNA, clone:rciht009p05, 3' en... 48 0.51 1
(BW179973) Ciona intestinalis cDNA, clone:rciht017j13, 3' en... 48 0.51 1
(BW179230) Ciona intestinalis cDNA, clone:rciht008c21, 3' en... 48 0.51 1
(BW178143) Ciona intestinalis cDNA, clone:rciht004j14, 3' en... 48 0.51 1
(BW177782) Ciona intestinalis cDNA, clone:rciht042h11, 3' en... 48 0.51 1
(BW146463) Ciona intestinalis cDNA, clone:rcign074f11, 3' en... 48 0.51 1
(AC098364) Rattus norvegicus clone CH230-1B7, *** SEQUENCING... 36 1.0 2
(EK094293) 1092962025663 Global-Ocean-Sampling_GS-31-01-01-1... 36 1.4 2
(CU570868) M.truncatula DNA sequence from clone MTH2-162A5 o... 46 2.0 1
(CT027663) Medicago truncatula chromosome 5 clone mth2-139g2... 46 2.0 1
(CR955005) Medicago truncatula chromosome 5 clone mte1-58c24... 46 2.0 1
(AC174315) Medicago truncatula clone mth2-165c4, complete se... 46 2.0 1
(AC150776) Medicago truncatula chromosome 7 clone mte1-45n16... 46 2.0 1
(AC148487) Medicago truncatula clone mth2-57f20, complete se... 46 2.0 1
(AC147483) Medicago truncatula clone mth2-22o7, complete seq... 46 2.0 1
(AC144563) Medicago truncatula clone mth2-5c24, complete seq... 46 2.0 1
(AC137839) Medicago truncatula chromosome 8 clone mth2-34j11... 46 2.0 1
(AC137702) Medicago truncatula clone mth2-7k10, complete seq... 46 2.0 1
(AC137669) Medicago truncatula clone mth2-27m3, complete seq... 46 2.0 1
(AC135565) Medicago truncatula clone mth2-19b12, complete se... 46 2.0 1
(AC123593) Genomic sequence for Medicago truncatula, clone M... 46 2.0 1
(AL607077) Human DNA sequence from clone RP11-374I15 on chro... 46 2.0 1
(AL390789) Human DNA sequence from clone RP11-572N15 on chro... 46 2.0 1
(AC223796) Bos taurus clone CH240-457J19, WORKING DRAFT SEQU... 46 2.0 1
(AC203826) Zea mays chromosome 1 clone CH201-539E8; ZMMBBc05... 46 2.0 1
(AC168147) Medicago truncatula clone mth2-69l5, WORKING DRAF... 46 2.0 1
(EJ296094) 1095388038537 Global-Ocean-Sampling_GS-27-01-01-1... 46 2.0 1
(CB895163) EST647955 HOGA Medicago truncatula cDNA clone HOG... 46 2.0 1
(CB893200) EST645992 HOGA Medicago truncatula cDNA clone HOG... 46 2.0 1
(CB893070) EST645862 HOGA Medicago truncatula cDNA clone HOG... 46 2.0 1
(BG454223) NF098E08LF1F1056 Developing leaf Medicago truncat... 46 2.0 1
(EY474877) METAA22TF JCVI-MT3 Medicago truncatula cDNA 5', m... 46 2.0 1
(CP000745) Methanococcus maripaludis C7, complete genome. 46 2.0 1
(AL844509) Plasmodium falciparum chromosome 13. 34 3.2 2
(AL049184) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 34 3.7 2
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 34 3.8 2
(AC168481) Strongylocentrotus purpuratus clone R3-3117L22, W... 34 3.9 2
(AC178099) Strongylocentrotus purpuratus clone R3-3067L19, W... 32 3.9 2
(AC181213) Strongylocentrotus purpuratus clone R3-115N19, WO... 34 3.9 2
(AC168489) Strongylocentrotus purpuratus clone R3-3117I12, W... 34 3.9 2
(AC147435) Medicago truncatula clone mth2-19c18, complete se... 32 3.9 2
(CT962504) M.truncatula DNA sequence from clone MTH2-38L12 o... 32 4.0 2
(AC200964) Strongylocentrotus purpuratus clone R3-1114K5, WO... 32 4.0 2
(AF466309) Dictyostelium discoideum serine protease/ABC tran... 32 4.7 2
(CF469847) P5-F4 Plasmodium yoelli 17X axenic hepatic stages... 32 5.1 2
(EX843535) CBNC418.rev CBNC Phycomyces blakesleeanus NRRL155... 34 5.2 2
(EL493367) B02_PFBAMHI-L-T7-PLATE4A.AB1 Blood stage Plasmodi... 34 5.2 2
(BJ373421) Dictyostelium discoideum cDNA clone:ddc3e02, 3' e... 32 5.3 2
(AC181345) Strongylocentrotus purpuratus clone R3-40H23, WOR... 38 6.7 3
(AL683801) Mouse DNA sequence from clone DN-74E14 on chromos... 44 8.0 1
(AL645637) Mouse DNA sequence from clone RP23-388B5 on chrom... 44 8.0 1
(AC121580) Mus musculus BAC clone RP23-255J21 from 9, comple... 44 8.0 1
(AC121121) Mus musculus chromosome 9, clone RP23-401G21, com... 44 8.0 1
(CR382137) Debaryomyces hansenii strain CBS767 chromosome E ... 44 8.0 1
(AC161981) Bos taurus clone CH240-106C16, WORKING DRAFT SEQU... 44 8.0 1
(AC100228) Mus musculus clone RP23-63B7, LOW-PASS SEQUENCE S... 44 8.0 1
(FP236722) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.0 1
(FP102213) Medicago truncatula chromosome 5 clone mtrs-161b8... 44 8.0 1
(CU468038) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.0 1
(CT954232) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.0 1
(AL645989) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***... 44 8.0 1
(AC202477) Medicago truncatula clone mth2-161a15, WORKING DR... 44 8.0 1
(AC180249) Strongylocentrotus purpuratus clone R3-33B23, WOR... 44 8.0 1
(AC167186) Mus musculus chromosome 1 clone RP23-115J17 map 1... 44 8.0 1
(FH642012) CHO_OF4570xa19r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 8.0 1
(FH523654) CHO_OF4722xn05r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 8.0 1
(ET895084) CHO_OF150xi07f1.ab1 CHO_OF Nicotiana tabacum geno... 44 8.0 1
(CZ878133) OC__Ba0279I01.f OC__Ba Oryza coarctata genomic cl... 44 8.0 1
(BZ882494) CH240_195I6.TJ CHORI-240 Bos taurus genomic clone... 44 8.0 1
(BZ874624) CH240_192F7.TV CHORI-240 Bos taurus genomic clone... 44 8.0 1
(BH938027) odf03b12.b1 B.oleracea002 Brassica oleracea genom... 44 8.0 1
(BW285696) Ciona intestinalis cDNA, clone:cigd028l14, 5' end... 44 8.0 1
(FL491301) Mg_Nor01_58G05 Nor01 Mytilus galloprovincialis cD... 44 8.0 1
(FG644711) TT-35_P05 K326 late senescent leaf library Nicoti... 44 8.0 1
(FF886546) CBWU24365.b1 Yutaka Satou unpublished cDNA librar... 44 8.0 1
(FF858439) CBWU6972.b1 Yutaka Satou unpublished cDNA library... 44 8.0 1
(FD933873) SmSal990 Orange wheat blossom midge salivary glan... 44 8.0 1
(EW543474) rsag031_m14.y1 sag Sus scrofa cDNA 5', mRNA seque... 44 8.0 1
(FH722166) CHO_OF5067xf18f1.ab1 CHO_OF5 Nicotiana tabacum ge... 40 8.6 2
(CU695331) Brassica rapa subsp. pekinensis clone KBrH127A07,... 40 9.3 3

>(AU053263) Dictyostelium discoideum slug cDNA, clone SLI271.
Length = 565

Score = 274 bits (138), Expect(3) = e-145
Identities = 138/138 (100%)
Strand = Plus / Plus


Query: 223 caatcaattcaaaattggaaaatcctcaaattagtaccgctcaattacaaggttggtcat 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caatcaattcaaaattggaaaatcctcaaattagtaccgctcaattacaaggttggtcat 60


Query: 283 tattcatcgtaattcacctttaaatcttttaccaacttgtgatgatttcattactcaatg 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tattcatcgtaattcacctttaaatcttttaccaacttgtgatgatttcattactcaatg 120


Query: 343 tacatctgaaactacttc 360
||||||||||||||||||
Sbjct: 121 tacatctgaaactacttc 138

Score = 254 bits (128), Expect(3) = e-145
Identities = 128/128 (100%)
Strand = Plus / Plus


Query: 509 ccaagtgttttatcaccttccaattcagaatctttagataatagaaatgatgataatgaa 568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ccaagtgttttatcaccttccaattcagaatctttagataatagaaatgatgataatgaa 346


Query: 569 gaaatttatgaagacaataataataatgaactttttgatggtaagtatactggtaactca 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gaaatttatgaagacaataataataatgaactttttgatggtaagtatactggtaactca 406


Query: 629 acaactag 636
||||||||
Sbjct: 407 acaactag 414

Score = 50.1 bits (25), Expect(3) = e-145
Identities = 25/25 (100%)
Strand = Plus / Plus


Query: 684 gaatatcttttagaatatctttttg 708
|||||||||||||||||||||||||
Sbjct: 462 gaatatcttttagaatatctttttg 486

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 626,092,988
Number of extensions: 41234307
Number of successful extensions: 3210603
Number of sequences better than 10.0: 103
Length of query: 786
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 762
Effective length of database: 99,340,224,878
Effective search space: 75697251357036
Effective search space used: 75697251357036
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.15
Homology vs Protein
Query= Contig-U01385-1 (Contig-U01385-1Q) /CSM_Contig/Contig-U01385-1Q.Seq.d
(786 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

FN392321_112(FN392321|pid:none) Pichia pastoris GS115 chromosome... 84 4e-15
CR380947_120(CR380947|pid:none) Candida glabrata strain CBS138 c... 82 1e-14
AM270022_42(AM270022|pid:none) Aspergillus niger contig An02c027... 82 1e-14
CR848645_1(CR848645|pid:none) Xenopus tropicalis finished cDNA, ... 81 3e-14
CR382125_103(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 81 3e-14
(Q7ZTL7) RecName: Full=Mitochondrial chaperone BCS1; AltName: Fu... 81 4e-14
(P32839) RecName: Full=Mitochondrial chaperone BCS1; &S61170(S6... 81 4e-14
CU928179_62(CU928179|pid:none) Zygosaccharomyces rouxii strain C... 80 6e-14
CU928170_653(CU928170|pid:none) Kluyveromyces thermotolerans str... 80 7e-14
CU633438_246(CU633438|pid:none) Podospora anserina genomic DNA c... 79 2e-13
(Q7ZV60) RecName: Full=Mitochondrial chaperone BCS1; AltName: Fu... 79 2e-13
S47190_1(S47190|pid:none) Saccharomyces cerevisiae BCS1 gene, nu... 79 2e-13
AM920428_1396(AM920428|pid:none) Penicillium chrysogenum Wiscons... 78 4e-13
BT045466_1(BT045466|pid:none) Salmo salar clone ssal-rgf-522-117... 78 4e-13
(Q5E9H5) RecName: Full=Mitochondrial chaperone BCS1; AltName: Fu... 78 4e-13
AY892287_1(AY892287|pid:none) Synthetic construct Homo sapiens c... 77 5e-13
AK223518_1(AK223518|pid:none) Homo sapiens mRNA for BCS1-like va... 77 5e-13
BC083660_1(BC083660|pid:none) Rattus norvegicus BCS1-like (yeast... 77 5e-13
BX571752_1(BX571752|pid:none) Homo sapiens mRNA; cDNA DKFZp686K1... 77 5e-13
AL844505_31(AL844505|pid:none) Plasmodium falciparum 3D7 chromos... 77 5e-13
AK289363_1(AK289363|pid:none) Homo sapiens cDNA FLJ77826 complet... 77 5e-13
D89136_1(D89136|pid:none) Schizosaccharomyces pombe mRNA, partia... 77 6e-13
T22632(T22632) hypothetical protein F54C9.6 - Caenorhabditis ele... 75 2e-12
Z49967_8(Z49967|pid:none) Caenorhabditis elegans Cosmid F54C9, c... 75 2e-12
AJ720889_1(AJ720889|pid:none) Gallus gallus mRNA for hypothetica... 75 2e-12
FN357618_18(FN357618|pid:none) Schistosoma mansoni genome sequen... 74 4e-12
AE014134_1857(AE014134|pid:none) Drosophila melanogaster chromos... 72 3e-11
CT005271_140(CT005271|pid:none) Leishmania major strain Friedlin... 68 4e-10
AL356172_18(AL356172|pid:none) Neurospora crassa DNA linkage gro... 66 1e-09
AC007212_3(AC007212|pid:none) Arabidopsis thaliana chromosome 2 ... 65 2e-09
(Q54HY8) RecName: Full=Probable mitochondrial chaperone BCS1-A; ... 65 2e-09
AP007159_703(AP007159|pid:none) Aspergillus oryzae RIB40 genomic... 64 4e-09
CR626934_10(CR626934|pid:none) Triticum aestivum. &CT009735_14(... 64 7e-09
AJ812008_1(AJ812008|pid:none) Aspergillus niger partial gene for... 64 7e-09
AM270340_7(AM270340|pid:none) Aspergillus niger contig An15c0130... 64 7e-09
AP007167_536(AP007167|pid:none) Aspergillus oryzae RIB40 genomic... 63 1e-08
AC152352_21(AC152352|pid:none) Medicago truncatula clone mth2-77... 62 2e-08
AM455310_1(AM455310|pid:none) Vitis vinifera contig VV78X266711.... 62 2e-08
CU640366_1224(CU640366|pid:none) Podospora anserina genomic DNA ... 62 3e-08
AL109796_10(AL109796|pid:none) Arabidopsis thaliana DNA chromoso... 61 4e-08
EF087852_1(EF087852|pid:none) Picea sitchensis clone WS02918_H08... 61 4e-08
BT052965_1(BT052965|pid:none) Medicago truncatula clone MTYFL_FM... 61 4e-08
AM470548_1(AM470548|pid:none) Vitis vinifera contig VV78X127010.... 61 4e-08
AP008211_2106(AP008211|pid:none) Oryza sativa (japonica cultivar... 61 5e-08
CR626929_5(CR626929|pid:none) Triticum aestivum. &CT009586_8(CT... 61 5e-08
BT038594_1(BT038594|pid:none) Zea mays full-length cDNA clone ZM... 61 5e-08
AM471995_2(AM471995|pid:none) Vitis vinifera contig VV78X052082.... 60 6e-08
CR954207_51(CR954207|pid:none) Ostreococcus tauri strain OTTH059... 60 6e-08
AP008215_758(AP008215|pid:none) Oryza sativa (japonica cultivar-... 60 6e-08
AP005720_18(AP005720|pid:none) Oryza sativa Japonica Group genom... 60 6e-08
AB011482_5(AB011482|pid:none) Arabidopsis thaliana genomic DNA, ... 60 8e-08
AC152352_26(AC152352|pid:none) Medicago truncatula clone mth2-77... 60 1e-07
AC137669_3(AC137669|pid:none) Medicago truncatula clone mth2-27m... 59 1e-07
AM455349_1(AM455349|pid:none) Vitis vinifera contig VV78X193283.... 59 2e-07
FJ234838_29(FJ234838|pid:none) Brachypodium sylvaticum clone BAC... 59 2e-07
BT061631_1(BT061631|pid:none) Zea mays full-length cDNA clone ZM... 59 2e-07
AC147498_29(AC147498|pid:none) Medicago truncatula clone mth2-6f... 59 2e-07
AY730334_3(AY730334|pid:none) Solanum tuberosum strain P6/210 cl... 59 2e-07
AC121246_18(AC121246|pid:none) Medicago truncatula clone mth2-35... 59 2e-07
AP000420_6(AP000420|pid:none) Arabidopsis thaliana genomic DNA, ... 59 2e-07
BT038663_1(BT038663|pid:none) Zea mays full-length cDNA clone ZM... 58 3e-07
AC125474_10(AC125474|pid:none) Medicago truncatula clone mth2-16... 58 3e-07
AM487076_1(AM487076|pid:none) Vitis vinifera contig VV78X188132.... 58 3e-07
AB006706_10(AB006706|pid:none) Arabidopsis thaliana genomic DNA,... 58 4e-07
BT026134_1(BT026134|pid:none) Arabidopsis thaliana. 57 5e-07
AL049480_11(AL049480|pid:none) Arabidopsis thaliana DNA chromoso... 57 5e-07
AK221930_1(AK221930|pid:none) Arabidopsis thaliana mRNA for BCS1... 57 5e-07
AL049862_22(AL049862|pid:none) Arabidopsis thaliana DNA chromoso... 57 5e-07
AK117288_1(AK117288|pid:none) Arabidopsis thaliana At3g50940 mRN... 57 5e-07
AC006418_16(AC006418|pid:none) Arabidopsis thaliana chromosome 2... 57 5e-07
AP000420_4(AP000420|pid:none) Arabidopsis thaliana genomic DNA, ... 57 7e-07
EU835980_7(EU835980|pid:none) Triticum aestivum clone BAC 502E09... 57 7e-07
CP000587_54(CP000587|pid:none) Ostreococcus lucimarinus CCE9901 ... 57 9e-07
AP008207_1955(AP008207|pid:none) Oryza sativa (japonica cultivar... 56 1e-06
AY643843_1(AY643843|pid:none) Hordeum vulgare subsp. vulgare clo... 56 1e-06
AC147498_21(AC147498|pid:none) Medicago truncatula clone mth2-6f... 56 1e-06
AP000420_5(AP000420|pid:none) Arabidopsis thaliana genomic DNA, ... 56 1e-06
AC147498_23(AC147498|pid:none) Medicago truncatula clone mth2-6f... 56 1e-06
EU835980_6(EU835980|pid:none) Triticum aestivum clone BAC 502E09... 56 1e-06
CR626933_6(CR626933|pid:none) Triticum turgidum. &CT009587_12(C... 56 1e-06
EU956897_1(EU956897|pid:none) Zea mays clone 1576937 ATPase 2 mR... 55 2e-06
BT060613_1(BT060613|pid:none) Zea mays full-length cDNA clone ZM... 55 2e-06
BT063006_1(BT063006|pid:none) Zea mays full-length cDNA clone ZM... 55 3e-06
AP005747_16(AP005747|pid:none) Oryza sativa Japonica Group genom... 55 3e-06
EU835981_10(EU835981|pid:none) Triticum aestivum clone BAC 1551N... 55 3e-06
CR626934_16(CR626934|pid:none) Triticum aestivum. &CT009735_20(... 55 3e-06
CR626934_8(CR626934|pid:none) Triticum aestivum. &CT009735_12(C... 55 3e-06
AC137669_8(AC137669|pid:none) Medicago truncatula clone mth2-27m... 55 3e-06
AC108906_14(AC108906|pid:none) Oryza sativa chromosome 3 BAC OSJ... 55 3e-06
AP002059_2(AP002059|pid:none) Arabidopsis thaliana genomic DNA, ... 54 4e-06
AK065505_1(AK065505|pid:none) Oryza sativa Japonica Group cDNA c... 54 4e-06
AY643843_6(AY643843|pid:none) Hordeum vulgare subsp. vulgare clo... 54 4e-06
AP005445_17(AP005445|pid:none) Oryza sativa Japonica Group genom... 54 4e-06
AF370607_1(AF370607|pid:none) Arabidopsis thaliana putative mito... 54 4e-06
AM480194_2(AM480194|pid:none) Vitis vinifera contig VV78X010452.... 54 6e-06
AC147498_13(AC147498|pid:none) Medicago truncatula clone mth2-6f... 54 6e-06
AP005124_12(AP005124|pid:none) Oryza sativa Japonica Group genom... 54 7e-06
AP008213_434(AP008213|pid:none) Oryza sativa (japonica cultivar-... 54 7e-06
AP008209_1924(AP008209|pid:none) Oryza sativa (japonica cultivar... 54 7e-06
EF676760_1(EF676760|pid:none) Picea sitchensis clone WS02751_B11... 54 7e-06
AP008218_843(AP008218|pid:none) Oryza sativa (japonica cultivar-... 54 7e-06
AC134237_13(AC134237|pid:none) Oryza sativa (japonica cultivar-g... 53 1e-05
AP002059_4(AP002059|pid:none) Arabidopsis thaliana genomic DNA, ... 53 1e-05
AP008218_840(AP008218|pid:none) Oryza sativa (japonica cultivar-... 52 2e-05
EU955726_1(EU955726|pid:none) Zea mays clone 1543796 cell Divisi... 52 2e-05
AP008218_1480(AP008218|pid:none) Oryza sativa (japonica cultivar... 52 2e-05
AM502254_590(AM502254|pid:none) Leishmania infantum chromosome 36. 52 2e-05
AP002059_3(AP002059|pid:none) Arabidopsis thaliana genomic DNA, ... 52 2e-05
AM494972_567(AM494972|pid:none) Leishmania braziliensis chromoso... 52 3e-05
AP008218_1478(AP008218|pid:none) Oryza sativa (japonica cultivar... 51 5e-05
EU964396_1(EU964396|pid:none) Zea mays clone 278548 cell Divisio... 50 6e-05
AP008216_1072(AP008216|pid:none) Oryza sativa (japonica cultivar... 50 6e-05
AC125474_28(AC125474|pid:none) Medicago truncatula clone mth2-16... 50 1e-04
AC125474_30(AC125474|pid:none) Medicago truncatula clone mth2-16... 50 1e-04
AP005124_10(AP005124|pid:none) Oryza sativa Japonica Group genom... 50 1e-04
CU633897_342(CU633897|pid:none) Podospora anserina genomic DNA c... 49 1e-04
T17534(T17534) hypothetical protein A44L - Chlorella virus PBCV-... 49 2e-04
AL161503_22(AL161503|pid:none) Arabidopsis thaliana DNA chromoso... 49 2e-04
AC144389_8(AC144389|pid:none) Medicago truncatula clone mth2-25e... 49 2e-04
CU633897_351(CU633897|pid:none) Podospora anserina genomic DNA c... 49 2e-04
AM463162_1(AM463162|pid:none) Vitis vinifera contig VV78X147799.... 49 2e-04
AP006627_516(AP006627|pid:none) Bacillus clausii KSM-K16 DNA, co... 46 0.001
AF015825_34(AF015825|pid:none) Bacillus subtilis 168 cotT-rapA r... 46 0.001
AP005124_11(AP005124|pid:none) Oryza sativa Japonica Group genom... 45 0.002
CP000875_1430(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 44 0.005
CP001107_3394(CP001107|pid:none) Eubacterium rectale ATCC 33656,... 44 0.008
AP000736_11(AP000736|pid:none) Arabidopsis thaliana genomic DNA,... 44 0.008
AC159408_32(AC159408|pid:none) Trypanosoma brucei chromosome 7 c... 42 0.017
CP001107_667(CP001107|pid:none) Eubacterium rectale ATCC 33656, ... 42 0.017
(Q5UPR4) RecName: Full=Uncharacterized protein R776; &AY653733_... 42 0.022
CP000382_676(CP000382|pid:none) Clostridium novyi NT, complete g... 42 0.029
AE017126_978(AE017126|pid:none) Prochlorococcus marinus subsp. m... 41 0.038
CP001037_4003(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 41 0.038
AP008230_4531(AP008230|pid:none) Desulfitobacterium hafniense Y5... 40 0.065
AJ965256_1273(AJ965256|pid:none) Dehalococcoides sp. CBDB1 compl... 40 0.065
BA000035_2538(BA000035|pid:none) Corynebacterium efficiens YS-31... 40 0.065
CP000853_2273(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 40 0.085
CP001620_1577(CP001620|pid:none) Corynebacterium kroppenstedtii ... 40 0.085
CR940352_681(CR940352|pid:none) Theileria annulata strain Ankara... 40 0.11
CP000885_2026(CP000885|pid:none) Clostridium phytofermentans ISD... 39 0.14
AM999887_227(AM999887|pid:none) Wolbachia endosymbiont of Culex ... 39 0.19
CP000712_2415(CP000712|pid:none) Pseudomonas putida F1, complete... 39 0.19
CP000724_4372(CP000724|pid:none) Alkaliphilus metalliredigens QY... 39 0.19
CP000435_800(CP000435|pid:none) Synechococcus sp. CC9311, comple... 39 0.19
CP001601_2236(CP001601|pid:none) Corynebacterium aurimucosum ATC... 39 0.25
CP001634_1529(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, c... 39 0.25
BX908789_22(BX908789|pid:none) Neurospora crassa DNA linkage gro... 39 0.25
CP000499_244(CP000499|pid:none) Pichia stipitis CBS 6054 chromos... 39 0.25
AB023310_1(AB023310|pid:none) Cyanidioschyzon merolae gene for F... 38 0.32
AM412317_3345(AM412317|pid:none) Clostridium botulinum A str. AT... 38 0.32
AE014295_1600(AE014295|pid:none) Bifidobacterium longum NCC2705,... 38 0.32
CP000605_1847(CP000605|pid:none) Bifidobacterium longum DJO10A, ... 38 0.32
CP000939_3341(CP000939|pid:none) Clostridium botulinum B1 str. O... 38 0.32
BC071038_1(BC071038|pid:none) Xenopus laevis hypothetical protei... 38 0.32
AM942444_1701(AM942444|pid:none) Corynebacterium urealyticum DSM... 38 0.32
CP000853_424(CP000853|pid:none) Alkaliphilus oremlandii OhILAs, ... 38 0.32
BC170788_1(BC170788|pid:none) Xenopus tropicalis AFG3(ATPase fam... 38 0.32
CP001095_526(CP001095|pid:none) Bifidobacterium longum subsp. in... 38 0.32
CP001083_3462(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 38 0.32
CP001581_3554(CP001581|pid:none) Clostridium botulinum A2 str. K... 38 0.32
BX248359_300(BX248359|pid:none) Corynebacterium diphtheriae grav... 38 0.42
AP006628_130(AP006628|pid:none) Onion yellows phytoplasma OY-M D... 38 0.42
CP000721_2986(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 38 0.42
CR382136_279(CR382136|pid:none) Debaryomyces hansenii strain CBS... 38 0.42
A96974(A96974) ATP-dependent zinc metallopeptidase FtsH (cell di... 37 0.55
AP007155_599(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 37 0.55
AP009044_2650(AP009044|pid:none) Corynebacterium glutamicum R DN... 37 0.55
AE017308_542(AE017308|pid:none) Mycoplasma mobile 163K complete ... 37 0.55
BX927156_44(BX927156|pid:none) Corynebacterium glutamicum ATCC 1... 37 0.55
BA000036_2696(BA000036|pid:none) Corynebacterium glutamicum ATCC... 37 0.55
AP006840_3195(AP006840|pid:none) Symbiobacterium thermophilum IA... 37 0.55
AE015927_2211(AE015927|pid:none) Clostridium tetani E88, complet... 37 0.55
(Q98PE4) RecName: Full=Cell division protease ftsH homolog; ... 37 0.55
Y18314_1(Y18314|pid:none) Homo sapiens mRNA for paraplegin-like ... 37 0.72
AM494964_114(AM494964|pid:none) Leishmania braziliensis chromoso... 37 0.72
FM992692_197(FM992692|pid:none) Candida dubliniensis CD36 chromo... 37 0.72
(Q8JZQ2) RecName: Full=AFG3-like protein 2; EC=3.4.24.-... 37 0.72
BC024282_1(BC024282|pid:none) Homo sapiens, Similar to AFG3 ATPa... 37 0.72
CP000312_541(CP000312|pid:none) Clostridium perfringens SM101, c... 37 0.72
CP000673_570(CP000673|pid:none) Clostridium kluyveri DSM 555, co... 37 0.72
CP000384_4752(CP000384|pid:none) Mycobacterium sp. MCS, complete... 37 0.72
AL832984_1(AL832984|pid:none) Homo sapiens mRNA; cDNA DKFZp666D1... 37 0.72
AL844506_77(AL844506|pid:none) Plasmodium falciparum 3D7 chromos... 37 0.72
(Q9Y4W6) RecName: Full=AFG3-like protein 2; EC=3.4.24.-... 37 0.72
AK168244_1(AK168244|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK... 37 0.72
AF329695_1(AF329695|pid:none) Mus musculus ATP-dependent zinc me... 37 0.72
AY493662_1(AY493662|pid:none) Candida albicans AAA ATPase gene, ... 37 0.72
BC168848_1(BC168848|pid:none) Rattus norvegicus AFG3(ATPase fami... 37 0.72
(Q54SY2) RecName: Full=Putative ribosome biogenesis ATPase nvl; ... 37 0.72
AY750868_1(AY750868|pid:none) Toxoptera citricida putative 26S p... 37 0.72
(Q920A7) RecName: Full=AFG3-like protein 1; EC=3.4.24.-... 37 0.72
AK152115_1(AK152115|pid:none) Mus musculus bone marrow macrophag... 37 0.72
AP009049_532(AP009049|pid:none) Clostridium kluyveri NBRC 12016 ... 37 0.72
CP000576_1450(CP000576|pid:none) Prochlorococcus marinus str. MI... 37 0.94
BX548174_1451(BX548174|pid:none) Prochlorococcus marinus MED4 co... 37 0.94
CP000551_1459(CP000551|pid:none) Prochlorococcus marinus str. AS... 37 0.94
CP000825_1484(CP000825|pid:none) Prochlorococcus marinus str. MI... 37 0.94
CT005272_606(CT005272|pid:none) Leishmania major strain Friedlin... 37 0.94
CP001213_467(CP001213|pid:none) Bifidobacterium animalis subsp. ... 37 0.94
CP000117_2226(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 37 0.94
AP008230_4074(AP008230|pid:none) Desulfitobacterium hafniense Y5... 37 0.94
AC022464_10(AC022464|pid:none) Genomic sequence for Arabidopsis ... 37 0.94
BX569692_157(BX569692|pid:none) Synechococcus sp. WH8102 complet... 37 0.94
CP000480_5903(CP000480|pid:none) Mycobacterium smegmatis str. MC... 37 0.94
AF037269_1(AF037269|pid:none) Mycobacterium smegmatis cell divis... 37 0.94
CP000817_80(CP000817|pid:none) Lysinibacillus sphaericus C3-41, ... 37 0.94
AP006841_776(AP006841|pid:none) Bacteroides fragilis YCH46 DNA, ... 37 0.94
CR382139_859(CR382139|pid:none) Debaryomyces hansenii strain CBS... 37 0.94
CP000656_1402(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 37 0.94
AE015928_4005(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 37 0.94
CR382125_922(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 37 0.94
CP000552_1424(CP000552|pid:none) Prochlorococcus marinus str. MI... 37 0.94
CP000673_2669(CP000673|pid:none) Clostridium kluyveri DSM 555, c... 37 0.94
CP000552_930(CP000552|pid:none) Prochlorococcus marinus str. MIT... 37 0.94
(Q8VZI8) RecName: Full=Cell division protease ftsH homolog 10, m... 37 0.94
BX548175_462(BX548175|pid:none) Prochlorococcus marinus MIT9313 ... 37 0.94
CP001336_1279(CP001336|pid:none) Desulfitobacterium hafniense DC... 37 0.94
CP000111_1480(CP000111|pid:none) Prochlorococcus marinus str. MI... 37 0.94
CR382122_133(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 37 0.94
BX548174_966(BX548174|pid:none) Prochlorococcus marinus MED4 com... 37 0.94
AH2422(AH2422) cell division protein [imported] - Nostoc sp. (st... 37 0.94
BC125787_1(BC125787|pid:none) Xenopus tropicalis hypothetical pr... 37 0.94
CP000325_3447(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 37 0.94
CP001056_3203(CP001056|pid:none) Clostridium botulinum B str. Ek... 37 0.94
CP000716_1652(CP000716|pid:none) Thermosipho melanesiensis BI429... 37 0.95
AY229998_1(AY229998|pid:none) Sulfolobus acidocaldarius strain D... 36 1.2
AL111168_942(AL111168|pid:none) Campylobacter jejuni subsp. jeju... 36 1.2
AC005315_14(AC005315|pid:none) Arabidopsis thaliana chromosome 2... 36 1.2
AM420293_389(AM420293|pid:none) Saccharopolyspora erythraea NRRL... 36 1.2
FM992689_281(FM992689|pid:none) Candida dubliniensis CD36 chromo... 36 1.2
CP001108_117(CP001108|pid:none) Prosthecochloris aestuarii DSM 2... 36 1.2
AC091781_54(AC091781|pid:none) Trypanosoma brucei chromosome 4 c... 36 1.2
CP000962_3530(CP000962|pid:none) Clostridium botulinum A3 str. L... 36 1.2
CP000025_1049(CP000025|pid:none) Campylobacter jejuni RM1221, co... 36 1.2
AM412317_3531(AM412317|pid:none) Clostridium botulinum A str. AT... 36 1.2
CP000096_76(CP000096|pid:none) Pelodictyon luteolum DSM 273, com... 36 1.2
FB781832_1(FB781832|pid:none) Sequence 1105 from Patent WO200803... 36 1.2
CP001099_72(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, c... 36 1.2
CP000814_940(CP000814|pid:none) Campylobacter jejuni subsp. jeju... 36 1.2
CP000728_3510(CP000728|pid:none) Clostridium botulinum F str. La... 36 1.2
CP001129_43(CP001129|pid:none) Streptococcus equi subsp. zooepid... 36 1.2
AC159413_35(AC159413|pid:none) Trypanosoma brucei chromosome 7 c... 36 1.2
(Q84WU8) RecName: Full=Cell division protease ftsH homolog 3, mi... 36 1.2
AY063914_1(AY063914|pid:none) Arabidopsis thaliana putative AAA-... 36 1.2
AM910996_571(AM910996|pid:none) Plasmodium knowlesi strain H chr... 36 1.2
CP000140_1794(CP000140|pid:none) Parabacteroides distasonis ATCC... 36 1.2
FM204883_46(FM204883|pid:none) Streptococcus equi subsp. equi 40... 36 1.2
CP000382_157(CP000382|pid:none) Clostridium novyi NT, complete g... 36 1.6
AL583917_222(AL583917|pid:none) Mycobacterium leprae strain TN c... 36 1.6
CP000079_107(CP000079|pid:none) Leishmania major strain Friedlin... 36 1.6
CP000580_5107(CP000580|pid:none) Mycobacterium sp. JLS, complete... 36 1.6
AE010299_1765(AE010299|pid:none) Methanosarcina acetivorans str.... 36 1.6
AM502240_55(AM502240|pid:none) Leishmania infantum chromosome 22. 36 1.6
CP000924_542(CP000924|pid:none) Thermoanaerobacter pseudethanoli... 36 1.6
AP009178_1080(AP009178|pid:none) Nitratiruptor sp. SB155-2 genom... 36 1.6
CP000481_1865(CP000481|pid:none) Acidothermus cellulolyticus 11B... 36 1.6
AM494959_52(AM494959|pid:none) Leishmania braziliensis chromosom... 36 1.6
CP001575_145(CP001575|pid:none) Micromonas sp. RCC299 chromosome... 36 1.6
AE015924_40(AE015924|pid:none) Porphyromonas gingivalis W83, com... 36 1.6
CP000962_405(CP000962|pid:none) Clostridium botulinum A3 str. Lo... 36 1.6
CP000061_414(CP000061|pid:none) Aster yellows witches'-broom phy... 36 1.6
CP001402_2422(CP001402|pid:none) Sulfolobus islandicus M.16.4, c... 36 1.6
AM412317_399(AM412317|pid:none) Clostridium botulinum A str. ATC... 36 1.6
CP001326_453(CP001326|pid:none) Micromonas sp. RCC299 chromosome... 36 1.6
CP000853_1947(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 36 1.6
CT573213_2793(CT573213|pid:none) Frankia alni str. ACN14A chromo... 36 1.6
CT005261_55(CT005261|pid:none) Leishmania major strain Friedlin,... 36 1.6
AP009380_43(AP009380|pid:none) Porphyromonas gingivalis ATCC 332... 36 1.6
CP000479_519(CP000479|pid:none) Mycobacterium avium 104, complet... 36 1.6
CP000589_215(CP000589|pid:none) Ostreococcus lucimarinus CCE9901... 36 1.6
CR380950_122(CR380950|pid:none) Candida glabrata strain CBS138 c... 36 1.6
AM502245_64(AM502245|pid:none) Leishmania infantum chromosome 27. 36 1.6
BX251410_160(BX251410|pid:none) Tropheryma whipplei TW08/27, com... 36 1.6
AE002110_9(AE002110|pid:none) Ureaplasma parvum serovar 3 str. A... 36 1.6
AE008691_1853(AE008691|pid:none) Thermoanaerobacter tengcongensi... 36 1.6
AL606588_1(AL606588|pid:none) Oryza sativa genomic DNA, chromoso... 36 1.6
CP001400_2298(CP001400|pid:none) Sulfolobus islandicus M.14.25, ... 36 1.6
CP000923_1009(CP000923|pid:none) Thermoanaerobacter sp. X514, co... 36 1.6
CP000879_440(CP000879|pid:none) Petrotoga mobilis SJ95, complete... 35 2.1
AE016819_627(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 35 2.1
AK144998_1(AK144998|pid:none) Mus musculus mammary gland RCB-052... 35 2.1
CP000088_2888(CP000088|pid:none) Thermobifida fusca YX, complete... 35 2.1
CP000582_140(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 35 2.1
AF479656_1(AF479656|pid:none) Homo sapiens spermatogenesis assoc... 35 2.1
AM392939_1(AM392939|pid:none) Synthetic construct Homo sapiens c... 35 2.1
AF086832_4(AF086832|pid:none) Streptomyces coelicolor putative f... 35 2.1
AF361489_1(AF361489|pid:none) Homo sapiens spermatogenesis assoc... 35 2.1
BC145302_1(BC145302|pid:none) Mus musculus spermatogenesis assoc... 35 2.1
CR382133_473(CR382133|pid:none) Debaryomyces hansenii strain CBS... 35 2.1
BT077485_1(BT077485|pid:none) Lepeophtheirus salmonis Pacific fo... 35 2.1
CR380957_405(CR380957|pid:none) Candida glabrata strain CBS138 c... 35 2.1
CU928178_417(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 35 2.1
AK091384_1(AK091384|pid:none) Homo sapiens cDNA FLJ34065 fis, cl... 35 2.1
AP009152_1927(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 35 2.1
AM910983_92(AM910983|pid:none) Plasmodium knowlesi strain H chro... 35 2.1
CU928171_100(CU928171|pid:none) Kluyveromyces thermotolerans str... 35 2.1
(Q8NB90) RecName: Full=Spermatogenesis-associated protein 5; Alt... 35 2.1
CP001104_1628(CP001104|pid:none) Eubacterium eligens ATCC 27750,... 35 2.1
AL645968_3(AL645968|pid:none) Mouse DNA sequence from clone DN-2... 35 2.1
BA000030_6684(BA000030|pid:none) Streptomyces avermitilis MA-468... 35 2.1
AE017262_228(AE017262|pid:none) Listeria monocytogenes str. 4b F... 35 2.1
CP001175_2391(CP001175|pid:none) Listeria monocytogenes HCC23, c... 35 2.1
AE014296_3046(AE014296|pid:none) Drosophila melanogaster chromos... 35 2.1
CP000139_1864(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 35 2.1
AP006861_251(AP006861|pid:none) Chlamydophila felis Fe/C-56 DNA,... 35 2.1
AE017125_879(AE017125|pid:none) Helicobacter hepaticus ATCC 5144... 35 2.1
AE015927_437(AE015927|pid:none) Clostridium tetani E88, complete... 35 2.1
AM393832_1(AM393832|pid:none) Synthetic construct Homo sapiens c... 35 2.1
AF467001_3(AF467001|pid:none) Listeria monocytogenes YabR-like p... 35 2.1
AE014188_382(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 35 2.1
AL939109_204(AL939109|pid:none) Streptomyces coelicolor A3(2) co... 35 2.1
CP000612_124(CP000612|pid:none) Desulfotomaculum reducens MI-1, ... 35 2.1
AL627074_2(AL627074|pid:none) Mouse DNA sequence from clone RP23... 35 2.1
FM242711_219(FM242711|pid:none) Listeria monocytogenes Clip81459... 35 2.1
AJ277109_1(AJ277109|pid:none) Trichoderma reesei nsf1 gene for v... 35 2.1
AC122730_28(AC122730|pid:none) Medicago truncatula clone mth2-36... 35 2.7
CP000553_960(CP000553|pid:none) Prochlorococcus marinus str. NAT... 35 2.7
CP000828_3144(CP000828|pid:none) Acaryochloris marina MBIC11017,... 35 2.7
(P62191) RecName: Full=26S protease regulatory subunit 4; AltNam... 35 2.7
(P48601) RecName: Full=26S protease regulatory subunit 4; AltNam... 35 2.7
AE017126_1335(AE017126|pid:none) Prochlorococcus marinus subsp. ... 35 2.7
CP000479_1399(CP000479|pid:none) Mycobacterium avium 104, comple... 35 2.7
CT005261_91(CT005261|pid:none) Leishmania major strain Friedlin,... 35 2.7
U97567_3(U97567|pid:none) Helicobacter pylori sress responsive o... 35 2.7
CR855142_4(CR855142|pid:none) Oryza sativa (indica cultivar-grou... 35 2.7
BT080690_1(BT080690|pid:none) Caligus clemensi clone ccle-evs-50... 35 2.7
AK222668_1(AK222668|pid:none) Homo sapiens mRNA for proteasome 2... 35 2.7
(Q90732) RecName: Full=26S protease regulatory subunit 4; AltNam... 35 2.7
CP000930_1249(CP000930|pid:none) Heliobacterium modesticaldum Ic... 35 2.7
CP000828_4801(CP000828|pid:none) Acaryochloris marina MBIC11017,... 35 2.7
BT020983_1(BT020983|pid:none) Bos taurus proteasome (prosome, ma... 35 2.7
CP000095_914(CP000095|pid:none) Prochlorococcus marinus str. NAT... 35 2.7
CP000241_379(CP000241|pid:none) Helicobacter pylori HPAG1, compl... 35 2.7
AE014298_1620(AE014298|pid:none) Drosophila melanogaster chromos... 35 2.7
DQ440313_1(DQ440313|pid:none) Aedes aegypti clone AET-397 26S pr... 35 2.7
AC183371_11(AC183371|pid:none) Medicago truncatula chromosome 7 ... 35 2.7
CP000412_289(CP000412|pid:none) Lactobacillus delbrueckii subsp.... 35 2.7
CP001287_1852(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 35 2.7
CP000850_4561(CP000850|pid:none) Salinispora arenicola CNS-205, ... 35 2.7
U59452_1(U59452|pid:none) Helicobacter pylori HpFtsH (ftsH) gene... 35 2.7
CP000667_4251(CP000667|pid:none) Salinispora tropica CNB-440, co... 35 2.7
BC129530_1(BC129530|pid:none) Xenopus laevis hypothetical protei... 35 2.7
CP000554_1902(CP000554|pid:none) Prochlorococcus marinus str. MI... 35 2.7
(Q9HGM3) RecName: Full=Mitochondrial respiratory chain complexes... 35 2.7
CP001072_376(CP001072|pid:none) Helicobacter pylori Shi470, comp... 35 2.7
CR382130_485(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 35 2.7
CP001217_373(CP001217|pid:none) Helicobacter pylori P12, complet... 35 2.7
FM992695_757(FM992695|pid:none) Candida dubliniensis CD36 chromo... 35 2.7
AP009389_198(AP009389|pid:none) Pelotomaculum thermopropionicum ... 35 2.7
A44468(A44468;B44468)26S proteasome regulatory chain 4 [validate... 35 2.7
AM910991_370(AM910991|pid:none) Plasmodium knowlesi strain H chr... 35 2.7
AY540192_1(AY540192|pid:none) Oreochromis mossambicus proteasome... 35 2.7
CT005261_92(CT005261|pid:none) Leishmania major strain Friedlin,... 35 2.7
BC067741_1(BC067741|pid:none) Homo sapiens proteasome (prosome, ... 35 2.7
AF323913_1(AF323913|pid:none) Neurospora crassa intermembrane sp... 35 2.7
CP000828_1251(CP000828|pid:none) Acaryochloris marina MBIC11017,... 35 2.7
(Q0DHL4) RecName: Full=Cell division protease ftsH homolog 8, mi... 35 3.6
AE001363_977(AE001363|pid:none) Chlamydophila pneumoniae CWL029,... 35 3.6
CP001390_1866(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 35 3.6
CP000792_888(CP000792|pid:none) Campylobacter concisus 13826, co... 35 3.6
AL954724_8(AL954724|pid:none) Zebrafish DNA sequence from clone ... 35 3.6
AL590443_137(AL590443|pid:none) chromosome III of strain GB-M1 o... 35 3.6
CT005268_71(CT005268|pid:none) Leishmania major strain Friedlin,... 35 3.6
BC055215_1(BC055215|pid:none) Danio rerio proteasome (prosome, m... 35 3.6
(Q9ZPR1) RecName: Full=Cell division control protein 48 homolog ... 35 3.6
AE014185_79(AE014185|pid:none) Plasmodium falciparum 3D7 chromos... 35 3.6
(O59824) RecName: Full=Protein YME1 homolog; EC=3.4.24.... 35 3.6
U77918_1(U77918|pid:none) Rattus norvegicus spermatogenic cell/s... 35 3.6
AM743169_1635(AM743169|pid:none) Stenotrophomonas maltophilia K2... 35 3.6
AK071386_1(AK071386|pid:none) Oryza sativa Japonica Group cDNA c... 35 3.6
AF080002_29(AF080002|pid:none) Heliobacillus mobilis exopolyphos... 35 3.6
AC135467_32(AC135467|pid:none) Medicago truncatula clone mth2-34... 35 3.6
AL954747_907(AL954747|pid:none) Nitrosomonas europaea ATCC 19718... 35 3.6
AL691439_2(AL691439|pid:none) Mouse DNA sequence from clone RP23... 35 3.6
BC060362_1(BC060362|pid:none) Xenopus laevis proteasome 26S ATPa... 35 3.6
AK151370_1(AK151370|pid:none) Mus musculus bone marrow macrophag... 35 3.6
AP006628_393(AP006628|pid:none) Onion yellows phytoplasma OY-M D... 35 3.6
AP003904_1(AP003904|pid:none) Oryza sativa Japonica Group genomi... 35 3.6
AK167002_1(AK167002|pid:none) Mus musculus blastocyst blastocyst... 35 3.6
CP001217_283(CP001217|pid:none) Helicobacter pylori P12, complet... 35 3.6
CP000382_450(CP000382|pid:none) Clostridium novyi NT, complete g... 35 3.6
CR855073_5(CR855073|pid:none) Oryza sativa (indica cultivar-grou... 35 3.6
CR382132_892(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 35 3.6
BC054164_1(BC054164|pid:none) Xenopus laevis proteasome (prosome... 35 3.6
BC080888_1(BC080888|pid:none) Xenopus tropicalis proteasome (pro... 35 3.6
CU928168_612(CU928168|pid:none) Kluyveromyces thermotolerans str... 35 3.6
(A1RWU6) RecName: Full=Replication factor C large subunit; ... 35 3.6
AK167061_1(AK167061|pid:none) Mus musculus blastocyst blastocyst... 35 3.6
AL691439_1(AL691439|pid:none) Mouse DNA sequence from clone RP23... 35 3.6
AL691439_3(AL691439|pid:none) Mouse DNA sequence from clone RP23... 35 3.6
CP001124_2614(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 35 3.6
AK222485_1(AK222485|pid:none) Homo sapiens mRNA for proteasome 2... 35 3.6
BT046299_1(BT046299|pid:none) Salmo salar clone ssal-eve-543-152... 35 3.6
AK150189_1(AK150189|pid:none) Mus musculus bone marrow macrophag... 35 3.6
(P17980) RecName: Full=26S protease regulatory subunit 6A; AltNa... 35 3.6
(P54775) RecName: Full=26S protease regulatory subunit 6B; AltNa... 35 3.6
AF397903_1(AF397903|pid:none) Pisum sativum AAA-metalloprotease ... 35 3.6
AM502249_73(AM502249|pid:none) Leishmania infantum chromosome 31. 35 3.6
CP001173_256(CP001173|pid:none) Helicobacter pylori G27, complet... 35 3.6
(P46469) RecName: Full=Cell division protease ftsH homolog; ... 35 3.6
AB169562_1(AB169562|pid:none) Macaca fascicularis brain cDNA, cl... 35 3.6
AK150989_1(AK150989|pid:none) Mus musculus bone marrow macrophag... 35 3.6
BC103063_1(BC103063|pid:none) Bos taurus proteasome (prosome, ma... 35 3.6
AK160644_1(AK160644|pid:none) Mus musculus 10, 11 days embryo wh... 35 3.6
CP000241_289(CP000241|pid:none) Helicobacter pylori HPAG1, compl... 35 3.6
(Q63569) RecName: Full=26S protease regulatory subunit 6A; AltNa... 35 3.6
CP001111_1467(CP001111|pid:none) Stenotrophomonas maltophilia R5... 35 3.6
AK168263_1(AK168263|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK... 35 3.6
AY891401_1(AY891401|pid:none) Synthetic construct Homo sapiens c... 35 3.6
AP008214_993(AP008214|pid:none) Oryza sativa (japonica cultivar-... 35 3.6
AJ720697_1(AJ720697|pid:none) Gallus gallus mRNA for hypothetica... 35 3.6
(Q8S2A7) RecName: Full=Cell division protease ftsH homolog 3, mi... 35 3.6
AF134402_1(AF134402|pid:none) Drosophila melanogaster Tat-bindin... 35 3.6
FN357538_19(FN357538|pid:none) Schistosoma mansoni genome sequen... 35 3.6
BC107804_1(BC107804|pid:none) Homo sapiens proteasome (prosome, ... 35 3.6
CU928169_249(CU928169|pid:none) Kluyveromyces thermotolerans str... 35 3.6
EF495211_82(EF495211|pid:none) Arthrobacter sp. AK-1 plasmid pSI... 35 3.6
AY809918_1(AY809918|pid:none) Schistosoma japonicum SJCHGC05874 ... 35 3.6
(O42586) RecName: Full=26S protease regulatory subunit 6A-B; Alt... 35 3.6
(P43686) RecName: Full=26S protease regulatory subunit 6B; AltNa... 35 3.6
(Q63570) RecName: Full=26S protease regulatory subunit 6B; AltNa... 35 3.6
AM180355_3651(AM180355|pid:none) Clostridium difficile 630 compl... 35 3.6
CR382128_99(CR382128|pid:none) Yarrowia lipolytica strain CLIB12... 35 3.6
BT075424_1(BT075424|pid:none) Osmerus mordax clone omor-eva-511-... 35 3.6
BT025458_1(BT025458|pid:none) Bos taurus proteasome (prosome, ma... 35 3.6
BC075596_1(BC075596|pid:none) Xenopus tropicalis proteasome (pro... 35 3.6
AB1964(AB1964) cell division protein [imported] - Nostoc sp. (st... 35 3.6
AB171711_1(AB171711|pid:none) Macaca fascicularis brain cDNA clo... 35 3.6
CP000232_303(CP000232|pid:none) Moorella thermoacetica ATCC 3907... 35 3.6
AK050677_1(AK050677|pid:none) Mus musculus 9 days embryo whole b... 35 3.6
FM201263_1(FM201263|pid:none) Candidatus Phytoplasma mali partia... 34 4.7
BX294143_49(BX294143|pid:none) Rhodopirellula baltica SH 1 compl... 34 4.7
CR931997_948(CR931997|pid:none) Corynebacterium jeikeium K411 co... 34 4.7
CP000881_144(CP000881|pid:none) Hemiselmis andersenii chromosome... 34 4.7
AP008971_994(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA,... 34 4.7
CP000941_62(CP000941|pid:none) Xylella fastidiosa M12, complete ... 34 4.7
CR848038_720(CR848038|pid:none) Chlamydophila abortus strain S26... 34 4.7
CP000820_295(CP000820|pid:none) Frankia sp. EAN1pec, complete ge... 34 4.7
(P49825) RecName: Full=Cell division protease ftsH homolog; ... 34 4.7
CP000097_1051(CP000097|pid:none) Synechococcus sp. CC9902, compl... 34 4.7
AE017196_423(AE017196|pid:none) Wolbachia endosymbiont of Drosop... 34 4.7
CU928176_652(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 34 4.7
AE015925_751(AE015925|pid:none) Chlamydophila caviae GPIC, compl... 34 4.7
AL939124_94(AL939124|pid:none) Streptomyces coelicolor A3(2) com... 34 4.7
AJ938182_460(AJ938182|pid:none) Staphylococcus aureus RF122 comp... 34 4.7
AP006628_326(AP006628|pid:none) Onion yellows phytoplasma OY-M D... 34 4.7
(O19922) RecName: Full=Cell division protease ftsH homolog; ... 34 4.7
AP008229_2801(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M... 34 4.7
DQ074889_1(DQ074889|pid:none) Lactobacillus reuteri lr1227 (lr12... 34 4.7
CP000100_996(CP000100|pid:none) Synechococcus elongatus PCC 7942... 34 4.7
AP009552_382(AP009552|pid:none) Microcystis aeruginosa NIES-843 ... 34 4.7
CP000082_1738(CP000082|pid:none) Psychrobacter arcticus 273-4, c... 34 4.7
AP009493_5856(AP009493|pid:none) Streptomyces griseus subsp. gri... 34 4.7
CR382123_278(CR382123|pid:none) Kluyveromyces lactis strain NRRL... 34 4.7
BA000030_4673(BA000030|pid:none) Streptomyces avermitilis MA-468... 34 4.7
AP009493_4088(AP009493|pid:none) Streptomyces griseus subsp. gri... 34 4.7
CP000110_1410(CP000110|pid:none) Synechococcus sp. CC9605, compl... 34 4.7
AM118080_27(AM118080|pid:none) Ustilago hordei mating type regio... 34 4.7
BX538350_38(BX538350|pid:none) Cryptosporidium parvum chromosome... 34 4.7
CP000682_2236(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 34 4.7
CP000269_810(CP000269|pid:none) Janthinobacterium sp. Marseille,... 34 4.7
AM039952_1765(AM039952|pid:none) Xanthomonas campestris pv. vesi... 34 4.7
CP001399_2428(CP001399|pid:none) Sulfolobus islandicus L.S.2.15,... 34 4.7
AE008922_1688(AE008922|pid:none) Xanthomonas campestris pv. camp... 34 4.7
AP006628_366(AP006628|pid:none) Onion yellows phytoplasma OY-M D... 34 4.7
CP000249_4265(CP000249|pid:none) Frankia sp. CcI3, complete geno... 34 4.7
AP007281_257(AP007281|pid:none) Lactobacillus reuteri JCM 1112 D... 34 4.7
CP000312_2375(CP000312|pid:none) Clostridium perfringens SM101, ... 34 4.7
AE001437_3151(AE001437|pid:none) Clostridium acetobutylicum ATCC... 34 4.7
AP008231_546(AP008231|pid:none) Synechococcus elongatus PCC 6301... 34 4.7
AK010336_1(AK010336|pid:none) Mus musculus ES cells cDNA, RIKEN ... 34 4.7
CP000967_1642(CP000967|pid:none) Xanthomonas oryzae pv. oryzae P... 34 4.7
(Q8Q084) RecName: Full=Replication factor C large subunit; ... 34 4.7
CP000705_262(CP000705|pid:none) Lactobacillus reuteri DSM 20016,... 34 4.7
AM260522_1070(AM260522|pid:none) Helicobacter acinonychis str. S... 34 4.7
AC133572_7(AC133572|pid:none) Medicago truncatula clone mth2-10o... 34 4.7
CP000246_2683(CP000246|pid:none) Clostridium perfringens ATCC 13... 34 4.7
CP001279_131(CP001279|pid:none) Nautilia profundicola AmH, compl... 34 6.1
AL590451_186(AL590451|pid:none) chromosome IX of strain GB-M1 of... 34 6.1
CP000776_455(CP000776|pid:none) Campylobacter hominis ATCC BAA-3... 34 6.1
AE014296_1323(AE014296|pid:none) Drosophila melanogaster chromos... 34 6.1
AY075495_1(AY075495|pid:none) Drosophila melanogaster RE47719 fu... 34 6.1
CT005251_22(CT005251|pid:none) Leishmania major strain Friedlin,... 34 6.1
AM711867_860(AM711867|pid:none) Clavibacter michiganensis subsp.... 34 6.1
CP000721_2496(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 34 6.1
AM849034_97(AM849034|pid:none) Clavibacter michiganensis subsp. ... 34 6.1
AB070253_1(AB070253|pid:none) Oryza sativa Japonica Group OsRPT3... 34 6.1
AE015928_2306(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 34 6.1
CP000770_3(CP000770|pid:none) Candidatus Sulcia muelleri GWSS, c... 34 6.1
BX548175_818(BX548175|pid:none) Prochlorococcus marinus MIT9313 ... 34 6.1
CT971583_1216(CT971583|pid:none) Synechococcus WH7803 complete g... 34 6.1
EF147477_1(EF147477|pid:none) Populus trichocarpa clone WS01231_... 34 6.1
AE015927_138(AE015927|pid:none) Clostridium tetani E88, complete... 34 6.1
AM502230_19(AM502230|pid:none) Leishmania infantum chromosome 12. 34 6.1
EF148658_1(EF148658|pid:none) Populus trichocarpa x Populus delt... 34 6.1
CT978603_1754(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 34 6.1
AP008230_201(AP008230|pid:none) Desulfitobacterium hafniense Y51... 34 6.1
CP001140_1067(CP001140|pid:none) Desulfurococcus kamchatkensis 1... 34 6.1
CP000481_202(CP000481|pid:none) Acidothermus cellulolyticus 11B ... 34 6.1
AF545811_1(AF545811|pid:none) Zea mays bromodomain protein 103 (... 34 6.1

>FN392321_112(FN392321|pid:none) Pichia pastoris GS115 chromosome 3,
complete sequence.
Length = 451

Score = 84.3 bits (207), Expect = 4e-15
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = +3

Query: 48 KRLVDSVFLDENISEKVVNDLTNFIHGKKWYTDTGVPYRRGYLLYGPPGSGKTSF 212
KRL+DSV LD+ I E +++D+ +F+ +WY D G+PYRRGYLLYGPPGSGKTSF
Sbjct: 215 KRLIDSVVLDKGIKESIIDDVQDFLTSGQWYHDRGIPYRRGYLLYGPPGSGKTSF 269

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 756,289,817
Number of extensions: 12421295
Number of successful extensions: 39329
Number of sequences better than 10.0: 623
Number of HSP's gapped: 39320
Number of HSP's successfully gapped: 624
Length of query: 262
Length of database: 1,051,180,864
Length adjustment: 126
Effective length of query: 136
Effective length of database: 643,374,430
Effective search space: 87498922480
Effective search space used: 87498922480
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.75 gvh: 0.43 alm: 0.42 top: 0.53 tms: 0.00 mit: 0.22 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

60.0 %: cytoplasmic
16.0 %: nuclear
8.0 %: cytoskeletal
8.0 %: vesicles of secretory system
4.0 %: mitochondrial
4.0 %: endoplasmic reticulum

>> prediction for Contig-U01385-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 2
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0