Contig-U06627-1
Contig ID Contig-U06627-1
Contig update 2001. 8.30
Contig sequence
>Contig-U06627-1 (Contig-U06627-1Q) /CSM_Contig/Contig-U06627-1Q.Seq.d
TTTAATTTAAACACATTCATATTAAATGTTAAGAAAAATGGAAACAGTTA
TTAAAGCACTTGCTGAAAATAAAATCTCTGATGTTATTTCTTTTACACCA
AAGAAATTATTAACAGTTAAATACAATGGTAAAGAATTAAATATTAATGA
TACATTAACACCAACAATTGTCCAAAATAAACCACATGTATCATGGGATG
CCAAAAATGATGAATTATATACTTTAATTTTTGATGACCCAGATGCACCA
ACCAGATCTGATCCAAAATTCGGTCAATGGAAACATTGGTTAGTAACCAA
CATTAAAGGTAATGATATTTCAACTGGTCAAGAATTAGCTAAATACATTG
GATCAGGTCCACCACCAAAAACTGGTTTACACAGATACATTTTCATCTTA
TGTAAACAACCAGGTACTGAAAATATTGAATTCAAAGGAGAACATATTTT
ACCACTTTCAGCTGAATTAAGAAATAATTGGAATGCTGAAACTTTCATTA
AAAAATGGAATTTAGAACCAGAAGCTATCAACTTTTATCAAGCTGAATAT
GATGATTATGTTCCACAACTCTATGCCAAATTAGGTGAAACTCAAGATAA
ACCAGTTGAAATTAAATAAACAATTATTCAATATTCAACATTAACAAATA
AGTAAATAAAGAAATTACCAAAAAATTTCCTTATTTGAAAATAATAAATA
AATTAATAAATAGATAATAATAAATAATAATTAAAAAAAAAAAAAA

Gap no gap
Contig length 746
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 1127330
End point 1128003
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 2
Link to clone list U06627
List of clone(s)

est1=VSG793F,1,427
est2=VSE317Z,238,747
Translated Amino Acid sequence
li*thsy*MLRKMETVIKALAENKISDVISFTPKKLLTVKYNGKELNINDTLTPTIVQNK
PHVSWDAKNDELYTLIFDDPDAPTRSDPKFGQWKHWLVTNIKGNDISTGQELAKYIGSGP
PPKTGLHRYIFILCKQPGTENIEFKGEHILPLSAELRNNWNAETFIKKWNLEPEAINFYQ
AEYDDYVPQLYAKLGETQDKPVEIK*tiiqystltnk*ikklpknfli*k**in**idnn
k**lkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
fnlntfilnvkkngnsy*stc*k*nl*cyffytkeiins*iqw*riky**yintnncpk*
ttcimgcqk**iiyfnf**prctnqi*skirsmetlvsnqh*r**yfnwsris*ihwirs
ttknwftqihfhlm*ttry*ky*iqrrtyfttfs*ikk*lec*nfh*kmefrtrsyqlls
s*i**lcsttlcqir*nsr*ts*n*innysifnink*vnkeitkkfpylkiinklinr**
*iiikkkk


Frame B:
li*thsy*MLRKMETVIKALAENKISDVISFTPKKLLTVKYNGKELNINDTLTPTIVQNK
PHVSWDAKNDELYTLIFDDPDAPTRSDPKFGQWKHWLVTNIKGNDISTGQELAKYIGSGP
PPKTGLHRYIFILCKQPGTENIEFKGEHILPLSAELRNNWNAETFIKKWNLEPEAINFYQ
AEYDDYVPQLYAKLGETQDKPVEIK*tiiqystltnk*ikklpknfli*k**in**idnn
k**lkkkk


Frame C:
*fkhihikc*ekwkqllkhllkikslmlfllhqrny*qlntmvkn*ilmih*hqqlskin
hmyhgmpkmmnyil*flmtqmhqpdliqnsvngnig**ptlkvmifqlvkn*lntldqvh
hqklvytdtfssyvnnqvlkilnskenifyhfqln*eiigmlklslkngi*nqklstfik
lnmmimfhnsmpn*vklkinqlklnkqlfniqh*qisk*rnyqkislfennk*ink*iii
nnn*kkkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U06627-1 (Contig-U06627-1Q)
/CSM_Contig/Contig-U06627-1Q.Seq.d
(746 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U06627-1 (Contig-U06627-1Q) /CSM_Contig/Conti... 1279 0.0
Contig-U06694-1 (Contig-U06694-1Q) /CSM_Contig/Conti... 200 2e-51
Contig-U07016-1 (Contig-U07016-1Q) /CSM_Contig/Conti... 38 0.013
Contig-U14187-1 (Contig-U14187-1Q) /CSM_Contig/Conti... 36 0.052
Contig-U13236-1 (Contig-U13236-1Q) /CSM_Contig/Conti... 36 0.052
Contig-U11064-1 (Contig-U11064-1Q) /CSM_Contig/Conti... 36 0.052
Contig-U10976-1 (Contig-U10976-1Q) /CSM_Contig/Conti... 36 0.052
Contig-U10422-1 (Contig-U10422-1Q) /CSM_Contig/Conti... 36 0.052
Contig-U03836-1 (Contig-U03836-1Q) /CSM_Contig/Conti... 36 0.052
Contig-U00230-1 (Contig-U00230-1Q) /CSM_Contig/Conti... 36 0.052

>Contig-U06627-1 (Contig-U06627-1Q) /CSM_Contig/Contig-U06627-1Q.Seq.d
Length = 746

Score = 1279 bits (645), Expect = 0.0
Identities = 645/645 (100%)
Strand = Plus / Plus


Query: 1 tttaatttaaacacattcatattaaatgttaagaaaaatggaaacagttattaaagcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttaatttaaacacattcatattaaatgttaagaaaaatggaaacagttattaaagcact 60


Query: 61 tgctgaaaataaaatctctgatgttatttcttttacaccaaagaaattattaacagttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgctgaaaataaaatctctgatgttatttcttttacaccaaagaaattattaacagttaa 120


Query: 121 atacaatggtaaagaattaaatattaatgatacattaacaccaacaattgtccaaaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atacaatggtaaagaattaaatattaatgatacattaacaccaacaattgtccaaaataa 180


Query: 181 accacatgtatcatgggatgccaaaaatgatgaattatatactttaatttttgatgaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accacatgtatcatgggatgccaaaaatgatgaattatatactttaatttttgatgaccc 240


Query: 241 agatgcaccaaccagatctgatccaaaattcggtcaatggaaacattggttagtaaccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agatgcaccaaccagatctgatccaaaattcggtcaatggaaacattggttagtaaccaa 300


Query: 301 cattaaaggtaatgatatttcaactggtcaagaattagctaaatacattggatcaggtcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cattaaaggtaatgatatttcaactggtcaagaattagctaaatacattggatcaggtcc 360


Query: 361 accaccaaaaactggtttacacagatacattttcatcttatgtaaacaaccaggtactga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 accaccaaaaactggtttacacagatacattttcatcttatgtaaacaaccaggtactga 420


Query: 421 aaatattgaattcaaaggagaacatattttaccactttcagctgaattaagaaataattg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaatattgaattcaaaggagaacatattttaccactttcagctgaattaagaaataattg 480


Query: 481 gaatgctgaaactttcattaaaaaatggaatttagaaccagaagctatcaacttttatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaatgctgaaactttcattaaaaaatggaatttagaaccagaagctatcaacttttatca 540


Query: 541 agctgaatatgatgattatgttccacaactctatgccaaattaggtgaaactcaagataa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agctgaatatgatgattatgttccacaactctatgccaaattaggtgaaactcaagataa 600


Query: 601 accagttgaaattaaataaacaattattcaatattcaacattaac 645
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 accagttgaaattaaataaacaattattcaatattcaacattaac 645


>Contig-U06694-1 (Contig-U06694-1Q) /CSM_Contig/Contig-U06694-1Q.Seq.d
Length = 351

Score = 200 bits (101), Expect = 2e-51
Identities = 101/101 (100%)
Strand = Plus / Minus


Query: 1 tttaatttaaacacattcatattaaatgttaagaaaaatggaaacagttattaaagcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tttaatttaaacacattcatattaaatgttaagaaaaatggaaacagttattaaagcact 219


Query: 61 tgctgaaaataaaatctctgatgttatttcttttacaccaa 101
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tgctgaaaataaaatctctgatgttatttcttttacaccaa 178


>Contig-U07016-1 (Contig-U07016-1Q) /CSM_Contig/Contig-U07016-1Q.Seq.d
Length = 251

Score = 38.2 bits (19), Expect = 0.013
Identities = 19/19 (100%)
Strand = Plus / Minus


Query: 606 ttgaaattaaataaacaat 624
|||||||||||||||||||
Sbjct: 140 ttgaaattaaataaacaat 122


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,896
Number of Sequences: 6905
Number of extensions: 11896
Number of successful extensions: 1235
Number of sequences better than 10.0: 137
length of query: 746
length of database: 5,674,871
effective HSP length: 16
effective length of query: 730
effective length of database: 5,564,391
effective search space: 4062005430
effective search space used: 4062005430
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11. 9
Homology vs DNA
Query= Contig-U06627-1 (Contig-U06627-1Q) /CSM_Contig/Contig-U06627-1Q.Seq.d
(746 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU266819) Dictyostelium discoideum vegetative cDNA clone:VS... 846 0.0 1
(AU263016) Dictyostelium discoideum vegetative cDNA clone:VS... 809 0.0 1
(AU265049) Dictyostelium discoideum vegetative cDNA clone:VS... 200 5e-47 1
(AU265050) Dictyostelium discoideum vegetative cDNA clone:VS... 184 3e-42 1
(DR109069) USDA-FP_166332 5th-instar Anoplophora glabripenni... 48 8e-07 3
(EX627269) 255442313 Pea aphid whole body normalized full le... 56 0.002 1
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 36 0.013 9
(AC115659) Rattus norvegicus clone CH230-361G14, WORKING DRA... 42 0.020 2
(ES599166) BPE00000461 Buddenbrockia plumatellae SMART cDNA ... 44 0.070 2
(AC178867) Strongylocentrotus purpuratus clone R3-26P12, WOR... 48 0.095 3
(AC019116) Homo sapiens BAC clone RP11-506M2 from 2, complet... 50 0.12 1
(AC069452) Homo sapiens chromosome 2 clone RP11-47K18 map 2,... 50 0.12 1
(ED039455) AUAC-aat90f12.b1 Ascaris suum whole genome shotgu... 50 0.12 1
(BG225654) kp70d01.y1 TBN95TM-SSFH Strongyloides stercoralis... 50 0.12 1
(CR388137) Zebrafish DNA sequence from clone DKEY-17M13 in l... 38 0.24 6
(AC110818) Mus musculus BAC clone RP23-198H8 from 16, comple... 38 0.27 2
(ED995457) MUGQ_CH252P177J22Sp6_CN245_087 CHORI-252 Vervet M... 38 0.28 2
(CU633420) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.48 1
(CU466937) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.48 1
(AC201586) Strongylocentrotus purpuratus clone R3-4016D23, W... 48 0.48 1
(AC178415) Strongylocentrotus purpuratus clone R3-3113A21, W... 48 0.48 1
(AC176761) Strongylocentrotus purpuratus clone R3-3097N7, WO... 48 0.48 1
(AC174031) Bos taurus clone CH240-90H12, WORKING DRAFT SEQUE... 48 0.48 1
(AC173355) Strongylocentrotus purpuratus clone R3-1024A12, W... 48 0.48 1
(BZ831671) CH240_287G2.TJ CHORI-240 Bos taurus genomic clone... 48 0.48 1
(ES221013) MpGV_ag2_E22 Myzus persicae, line G006, PLRV infe... 48 0.48 1
(EE571195) D11_D11fv2n22_pDNRf_530923 Myzus persicae, line F... 48 0.48 1
(EE570108) B01_B01fm3i2_pDNRf_532665 Myzus persicae, line F0... 48 0.48 1
(EE264112) E10_E10gf4g19_pDNRf_505760 Myzus persicae, line G... 48 0.48 1
(EE262402) C12_C12fm1b23_pDNRf_520613 Myzus persicae, line F... 48 0.48 1
(EC389802) E01_E01h2k1_pDNRf_473398 Myzus persicae, tobacco ... 48 0.48 1
(DV745523) ID0AAG2DA11CM1 ID0AAG Acyrthosiphon pisum cDNA cl... 48 0.48 1
(DV742820) ID0AFF8AG08CM1 ID0AFF Acyrthosiphon pisum cDNA cl... 48 0.48 1
(DV095692) 327-384-57_O10_M13-FP Nematostella vectensis norm... 48 0.48 1
(CV831405) ID0ACC18AH12RM1 ID0ACC Acyrthosiphon pisum cDNA c... 48 0.48 1
(CN582239) USDA-FP_125301 Acyrthosiphon pisum, Pea Aphid Acy... 48 0.48 1
(CN582091) USDA-FP_125153 Acyrthosiphon pisum, Pea Aphid Acy... 48 0.48 1
(CK241621) rx31g07.y1 Meloidogyne paranaensis egg SL1 pGEM M... 48 0.48 1
(BP536815) Acyrthosiphon pisum cDNA clone:BCA019054, 5prime ... 48 0.48 1
(BP535892) Acyrthosiphon pisum cDNA clone:BCA005058, 5prime ... 48 0.48 1
(BP535595) Acyrthosiphon pisum cDNA clone:BCA001072, 5prime ... 48 0.48 1
(BP153836) Sus scrofa mRNA, clone:OVRM10092H02, 5' end, expr... 48 0.48 1
(FF330112) 280443264 Pea aphid whole body normalized full le... 48 0.48 1
(FF329878) 280441807 Pea aphid whole body normalized full le... 48 0.48 1
(FF327014) 280431512 Pea aphid whole body normalized full le... 48 0.48 1
(FF325612) 280427431 Pea aphid whole body normalized full le... 48 0.48 1
(FF318782) 280398018 Pea aphid whole body normalized full le... 48 0.48 1
(FF317023) 280391351 Pea aphid whole body normalized full le... 48 0.48 1
(FF314910) 279397893 Pea aphid whole body normalized full le... 48 0.48 1
(FF314194) 279391988 Pea aphid whole body normalized full le... 48 0.48 1
(FF309518) 279375469 Pea aphid whole body normalized full le... 48 0.48 1
(FF308636) 279372144 Pea aphid whole body normalized full le... 48 0.48 1
(FF300259) 279336453 Pea aphid whole body normalized full le... 48 0.48 1
(FF299854) 279331173 Pea aphid whole body normalized full le... 48 0.48 1
(FF298835) 279325547 Pea aphid whole body normalized full le... 48 0.48 1
(FF298824) 279325433 Pea aphid whole body normalized full le... 48 0.48 1
(FF292799) 279288523 Pea aphid whole body normalized full le... 48 0.48 1
(FD464194) LARW424TF Haematobia irritans 1st Instar Larvae H... 48 0.48 1
(FC244798) CAGH3345.fwd CAGH Nematostella vectensis Nemve La... 48 0.48 1
(FC244797) CAGH3345.rev CAGH Nematostella vectensis Nemve La... 48 0.48 1
(EX645929) 256683154 Pea aphid whole body normalized full le... 48 0.48 1
(EX637301) 256615078 Pea aphid whole body normalized full le... 48 0.48 1
(EX630884) 255478077 Pea aphid whole body normalized full le... 48 0.48 1
(EX625762) 255432349 Pea aphid whole body normalized full le... 48 0.48 1
(EX624826) 255429374 Pea aphid whole body normalized full le... 48 0.48 1
(EX624282) 255427464 Pea aphid whole body normalized full le... 48 0.48 1
(EX621661) 255417532 Pea aphid whole body normalized full le... 48 0.48 1
(EX618828) 255407105 Pea aphid whole body normalized full le... 48 0.48 1
(EX617460) 255397873 Pea aphid whole body normalized full le... 48 0.48 1
(EX615847) 255394891 Pea aphid whole body normalized full le... 48 0.48 1
(EX613517) 255383090 Pea aphid whole body normalized full le... 48 0.48 1
(EX613007) 255383109 Pea aphid whole body normalized full le... 48 0.48 1
(EX611435) 255375225 Pea aphid whole body normalized full le... 48 0.48 1
(CP000102) Methanosphaera stadtmanae DSM 3091, complete genome. 34 0.48 17
(FD663813) TransId-115555 HhtracL2BTEIII Hypothenemus hampei... 44 0.90 2
(EK094843) 1092962028374 Global-Ocean-Sampling_GS-31-01-01-1... 36 1.2 2
(ER363224) 1093018906258 Global-Ocean-Sampling_GS-34-01-01-1... 36 1.2 2
(EH011266) USDA-FP_184282 Lysiphlebus testaceipes adult whol... 34 1.3 3
(AC127684) Mus musculus BAC clone RP24-171J12 from chromosom... 36 1.3 4
(AZ686406) ENTLC78TR Entamoeba histolytica Sheared DNA Entam... 42 1.3 2
(EH005578) AsEST084 Anisakis simplex 3rd stage larva cDNA li... 44 1.3 2
(ER467417) 1092963930519 Global-Ocean-Sampling_GS-35-01-01-1... 36 1.3 2
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 34 1.3 9
(DV780777) Hw_Fat_56_050802_G01 Bos taurus CF-24-HW fat cDNA... 36 1.6 2
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 32 1.6 12
(CR936263) Zebrafish DNA sequence from clone DKEYP-36F6 in l... 46 1.9 1
(BX649300) Zebrafish DNA sequence from clone CH211-195I16 in... 46 1.9 1
(AC147178) Medicago truncatula clone mth2-142i4, complete se... 46 1.9 1
(CS465100) Sequence 47 from Patent WO2006127310. 46 1.9 1
(AC156956) Bos taurus clone CH240-71A13, WORKING DRAFT SEQUE... 46 1.9 1
(AC106673) Rattus norvegicus clone CH230-108J3, WORKING DRAF... 46 1.9 1
(AC097388) Rattus norvegicus clone CH230-8O5, WORKING DRAFT ... 46 1.9 1
(CR762394) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 1.9 1
(AC225458) Medicago truncatula clone mth2-161l3, WORKING DRA... 46 1.9 1
(EJ504307) 1095403674833 Global-Ocean-Sampling_GS-28-01-01-1... 46 1.9 1
(EJ168693) 1092344075398 Global-Ocean-Sampling_GS-27-01-01-1... 46 1.9 1
(DX120181) OG_ABa0146K18.f OG_ABa Oryza granulata genomic cl... 46 1.9 1
(CB421198) 594205 MARC 6BOV Bos taurus cDNA 5', mRNA sequence. 46 1.9 1
(EX625029) 255431874 Pea aphid whole body normalized full le... 46 1.9 1
(EW770081) ST020021B10H01 Normalized and subtracted western ... 46 1.9 1

>(AU266819) Dictyostelium discoideum vegetative cDNA clone:VSG793,
5' end single read.
Length = 427

Score = 846 bits (427), Expect = 0.0
Identities = 427/427 (100%)
Strand = Plus / Plus


Query: 1 tttaatttaaacacattcatattaaatgttaagaaaaatggaaacagttattaaagcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttaatttaaacacattcatattaaatgttaagaaaaatggaaacagttattaaagcact 60


Query: 61 tgctgaaaataaaatctctgatgttatttcttttacaccaaagaaattattaacagttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgctgaaaataaaatctctgatgttatttcttttacaccaaagaaattattaacagttaa 120


Query: 121 atacaatggtaaagaattaaatattaatgatacattaacaccaacaattgtccaaaataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atacaatggtaaagaattaaatattaatgatacattaacaccaacaattgtccaaaataa 180


Query: 181 accacatgtatcatgggatgccaaaaatgatgaattatatactttaatttttgatgaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accacatgtatcatgggatgccaaaaatgatgaattatatactttaatttttgatgaccc 240


Query: 241 agatgcaccaaccagatctgatccaaaattcggtcaatggaaacattggttagtaaccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agatgcaccaaccagatctgatccaaaattcggtcaatggaaacattggttagtaaccaa 300


Query: 301 cattaaaggtaatgatatttcaactggtcaagaattagctaaatacattggatcaggtcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cattaaaggtaatgatatttcaactggtcaagaattagctaaatacattggatcaggtcc 360


Query: 361 accaccaaaaactggtttacacagatacattttcatcttatgtaaacaaccaggtactga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 accaccaaaaactggtttacacagatacattttcatcttatgtaaacaaccaggtactga 420


Query: 421 aaatatt 427
|||||||
Sbjct: 421 aaatatt 427

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 935,665,981
Number of extensions: 58952836
Number of successful extensions: 4980902
Number of sequences better than 10.0: 181
Length of query: 746
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 722
Effective length of database: 97,308,875,965
Effective search space: 70257008446730
Effective search space used: 70257008446730
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.22
Homology vs Protein
Query= Contig-U06627-1 (Contig-U06627-1Q) /CSM_Contig/Contig-U06627-1Q.Seq.d
(746 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

DQ443265_1(DQ443265|pid:none) Bombyx mori phosphatidylethanolami... 181 2e-44
DQ443264_1(DQ443264|pid:none) Bombyx mori phosphatidylethanolami... 179 8e-44
AY264806_1(AY264806|pid:none) Branchiostoma belcheri tsingtaunes... 168 2e-40
(O16264) RecName: Full=Phosphatidylethanolamine-binding protein ... 166 7e-40
AF016423_4(AF016423|pid:none) Caenorhabditis elegans cosmid F40A... 166 7e-40
AY608669_1(AY608669|pid:none) Branchiostoma belcheri tsingtaunes... 165 1e-39
AE014297_442(AE014297|pid:none) Drosophila melanogaster chromoso... 160 4e-38
DQ440356_1(DQ440356|pid:none) Aedes aegypti clone AET-458 phosph... 159 1e-37
AY187040_1(AY187040|pid:none) Anopheles gambiae putative antenna... 158 1e-37
AE014134_2320(AE014134|pid:none) Drosophila melanogaster chromos... 155 1e-36
AC116960_24(AC116960|pid:none) Dictyostelium discoideum chromoso... 154 3e-36
(P70296) RecName: Full=Phosphatidylethanolamine-binding protein ... 144 2e-33
(P13696) RecName: Full=Phosphatidylethanolamine-binding protein ... 142 1e-32
S00056(S00056;S51191)basic cytosolic protein, 21K - bovine 142 1e-32
U43206_1(U43206|pid:none) Mus musculus phosphatidylethanolamine ... 142 1e-32
PC4216(PC4216)phosphatidylethanolamine binding protein Ovd1 - ne... 141 2e-32
BC047812_1(BC047812|pid:none) Danio rerio zgc:56033, mRNA (cDNA ... 140 4e-32
S18358(S18358)23K protein - rat 139 7e-32
BC102389_1(BC102389|pid:none) Bos taurus phosphatidylethanolamin... 139 9e-32
BC073043_1(BC073043|pid:none) Xenopus laevis MGC82659 protein, m... 138 2e-31
AE014297_3289(AE014297|pid:none) Drosophila melanogaster chromos... 137 3e-31
BC106263_1(BC106263|pid:none) Xenopus laevis MGC82659 protein, m... 137 3e-31
AX399866_1(AX399866|pid:none) Sequence 37 from Patent WO0218424. 137 4e-31
(Q8MK67) RecName: Full=Phosphatidylethanolamine-binding protein ... 137 4e-31
DQ215439_1(DQ215439|pid:none) Taeniopygia guttata clone 0058P003... 137 4e-31
(P30086) RecName: Full=Phosphatidylethanolamine-binding protein ... 137 4e-31
BT073678_1(BT073678|pid:none) Oncorhynchus mykiss clone omyk-evo... 137 4e-31
(P48737) RecName: Full=Phosphatidylethanolamine-binding protein ... 137 4e-31
AY232115_1(AY232115|pid:none) Drosophila yakuba clone yak-ad_CG1... 137 5e-31
DQ215438_1(DQ215438|pid:none) Taeniopygia guttata clone 0058P002... 137 5e-31
BT079214_1(BT079214|pid:none) Esox lucius clone eluc-evq-509-125... 136 6e-31
CR855528_1(CR855528|pid:none) Xenopus tropicalis finished cDNA, ... 136 8e-31
(Q5R4R0) RecName: Full=Phosphatidylethanolamine-binding protein ... 135 1e-30
AF117272_1(AF117272|pid:none) Octopus dofleini O-crystallin mRNA... 129 7e-29
AE014297_3288(AE014297|pid:none) Drosophila melanogaster chromos... 125 1e-27
S76773_1(S76773|pid:none) neuropolypeptide h3 [human, brain, mRN... 125 2e-27
DQ215460_1(DQ215460|pid:none) Taeniopygia guttata clone 0061P002... 114 3e-24
AB171296_1(AB171296|pid:none) Macaca fascicularis brain cDNA clo... 114 4e-24
AK299414_1(AK299414|pid:none) Homo sapiens cDNA FLJ51535 complet... 112 9e-24
U05243_1(U05243|pid:none) Drosophila melanogaster Canton S putat... 110 4e-23
AY080910_1(AY080910|pid:none) Onchocerca volvulus 16kDa-like pro... 110 4e-23
PC4215(PC4215)phosphatidylethanolamine binding protein Ovd2 - ne... 110 6e-23
AF307147_1(AF307147|pid:none) Mus musculus strain CD-1 phosphati... 105 1e-21
A44947(A44947) 16k antigen precursor - nematode (Onchocerca volv... 100 4e-20
FJ655551_1(FJ655551|pid:none) Selaginella denticulata mother of ... 96 2e-18
AJ721057_1(AJ721057|pid:none) Gallus gallus mRNA for hypothetica... 93 8e-18
AM989980_59(AM989980|pid:none) Zygosaccharomyces rouxii strain C... 89 1e-16
AB181241_1(AB181241|pid:none) Populus nigra PnFTL4a mRNA for flo... 89 1e-16
EU241903_1(EU241903|pid:none) Zea mays ZCN12 (ZCN12) gene, compl... 89 2e-16
CR382136_456(CR382136|pid:none) Debaryomyces hansenii strain CBS... 87 4e-16
EF012202_1(EF012202|pid:none) Hordeum vulgare subsp. vulgare FT-... 87 4e-16
FJ655546_1(FJ655546|pid:none) Physcomitrella patens mother of FT... 87 5e-16
(Q9D9G2) RecName: Full=Phosphatidylethanolamine-binding protein ... 87 5e-16
BC020779_1(BC020779|pid:none) Homo sapiens phosphatidylethanolam... 87 7e-16
FJ555224_1(FJ555224|pid:none) Malus x domestica flowering locus ... 87 7e-16
DQ286962_1(DQ286962|pid:none) Aquilegia formosa terminal flower ... 87 7e-16
AY359109_1(AY359109|pid:none) Homo sapiens clone DNA92274 GWTM19... 87 7e-16
EU400602_1(EU400602|pid:none) Poncirus trifoliata CTRSFT1-like p... 87 7e-16
DQ871594_1(DQ871594|pid:none) Vitis vinifera MFT-like protein (M... 87 7e-16
FJ655547_1(FJ655547|pid:none) Physcomitrella patens mother of FT... 87 7e-16
AB301934_1(AB301934|pid:none) Citrus unshiu CiFT2 mRNA for flowe... 86 9e-16
EU241899_1(EU241899|pid:none) Zea mays ZCN8 (ZCN8) gene, complet... 86 1e-15
FJ655550_1(FJ655550|pid:none) Physcomitrella patens mother of FT... 86 1e-15
BC067649_1(BC067649|pid:none) Danio rerio mitochondrial ribosoma... 86 1e-15
EU241914_1(EU241914|pid:none) Zea mays ZCN24 (ZCN24) gene, compl... 86 2e-15
EU241925_1(EU241925|pid:none) Zea mays ZCN9 (ZCN9) mRNA, complet... 86 2e-15
AB383156_1(AB383156|pid:none) Cucumis sativus CsTFL1LC2 mRNA for... 86 2e-15
AB109804_1(AB109804|pid:none) Populus nigra PnFT2a mRNA for flow... 85 2e-15
CU928170_70(CU928170|pid:none) Kluyveromyces thermotolerans stra... 85 2e-15
BC128940_1(BC128940|pid:none) Xenopus laevis mitochondrial ribos... 85 3e-15
AK110620_1(AK110620|pid:none) Oryza sativa Japonica Group cDNA c... 85 3e-15
AB304142_1(AB304142|pid:none) Citrus unshiu CuMFT1 mRNA for MOTH... 85 3e-15
AB106111_1(AB106111|pid:none) Populus nigra PnFT1a mRNA for flow... 85 3e-15
AX060293_1(AX060293|pid:none) Sequence 1 from Patent WO0078802. ... 85 3e-15
EU241909_1(EU241909|pid:none) Zea mays ZCN18 (ZCN18) gene, compl... 85 3e-15
EU241910_1(EU241910|pid:none) Zea mays ZCN19 (ZCN19) gene, compl... 84 4e-15
EU241898_1(EU241898|pid:none) Zea mays ZCN7 (ZCN7) gene, complet... 84 4e-15
FM992692_135(FM992692|pid:none) Candida dubliniensis CD36 chromo... 84 4e-15
AB027456_1(AB027456|pid:none) Citrus unshiu CiFT mRNA, complete ... 84 4e-15
DQ517499_1(DQ517499|pid:none) Glycine max CETS1 gene, complete c... 84 5e-15
AB110009_1(AB110009|pid:none) Populus nigra PnFT3c mRNA for flow... 84 6e-15
DQ871593_1(DQ871593|pid:none) Vitis vinifera TFL1C protein (TFL1... 83 8e-15
AY186735_1(AY186735|pid:none) Lycopersicon esculentum SP3D (SP3D... 82 1e-14
CR760953_1(CR760953|pid:none) Xenopus tropicalis finished cDNA, ... 82 1e-14
(Q9XH44) RecName: Full=CEN-like protein 1; &AF145259_1(AF145259... 82 1e-14
EF633467_1(EF633467|pid:none) Picea abies terminal flower-like p... 82 2e-14
AM943979_1(AM943979|pid:none) Prunus mume mRNA for flowering loc... 82 2e-14
EU128013_1(EU128013|pid:none) Chenopodium rubrum Flowering locus... 81 3e-14
EF193850_1(EF193850|pid:none) Vicia faba cultivar Vf2 TFL1 (TFL1... 81 3e-14
DQ865290_1(DQ865290|pid:none) Cucurbita maxima flowering locus T... 81 3e-14
EU352135_1(EU352135|pid:none) Arabidopsis lyrata At5g03840-like ... 81 4e-14
(Q9FIT4) RecName: Full=Protein BROTHER of FT and TFL 1; &AB0168... 81 4e-14
EF193847_1(EF193847|pid:none) Vicia faba cultivar 2N52 TFL1 (TFL... 81 4e-14
EU241919_1(EU241919|pid:none) Zea mays ZCN3 (ZCN3) mRNA, complet... 81 4e-14
FN392321_655(FN392321|pid:none) Pichia pastoris GS115 chromosome... 81 4e-14
EF462211_1(EF462211|pid:none) Cucurbita moschata cultivar PI4417... 80 5e-14
EU352120_1(EU352120|pid:none) Arabidopsis thaliana ecotype Sha A... 80 5e-14
EU352115_1(EU352115|pid:none) Arabidopsis thaliana ecotype Di-G ... 80 5e-14
(P93003) RecName: Full=Protein TERMINAL FLOWER 1; &AB005235_12(... 80 5e-14
EU241894_1(EU241894|pid:none) Zea mays ZCN3 (ZCN3) gene, complet... 80 5e-14
AB052942_1(AB052942|pid:none) Oryza sativa Japonica Group Hd3a g... 80 7e-14
AB426885_1(AB426885|pid:none) Oryza longistaminata Hd3a gene for... 80 7e-14
AB161112_1(AB161112|pid:none) Malus x domestica MdFT mRNA for fl... 80 7e-14
AB052941_1(AB052941|pid:none) Oryza sativa Indica Group Hd3a gen... 80 7e-14
AB017525_1(AB017525|pid:none) Brassica napus BNTFL1-1 gene, comp... 80 7e-14
AB433525_1(AB433525|pid:none) Oryza rufipogon Hd3a gene, complet... 80 7e-14
(Q9SXZ2) RecName: Full=Protein FLOWERING LOCUS T; &AB027504_1(A... 80 7e-14
AB433519_1(AB433519|pid:none) Oryza rufipogon Hd3a gene, complet... 80 7e-14
AB426889_1(AB426889|pid:none) Oryza glumipatula Hd3a gene for FT... 80 7e-14
AB383155_1(AB383155|pid:none) Cucumis sativus CsTFL1LC1 mRNA for... 80 9e-14
AB435524_1(AB435524|pid:none) Raphanus sativus RsTFL1 mRNA for t... 80 9e-14
AB383152_1(AB383152|pid:none) Cucumis sativus CsFT mRNA for FT-l... 80 9e-14
DQ925416_1(DQ925416|pid:none) Zea mays terminal flower 1 mRNA, c... 80 9e-14
EU400601_1(EU400601|pid:none) Poncirus trifoliata isolate zao CT... 79 1e-13
DQ865291_1(DQ865291|pid:none) Cucurbita maxima flowering locus T... 79 1e-13
CR382123_73(CR382123|pid:none) Kluyveromyces lactis strain NRRL ... 79 1e-13
AB181185_1(AB181185|pid:none) Populus nigra PnFTL3a mRNA for flo... 79 2e-13
AY186736_1(AY186736|pid:none) Lycopersicon esculentum SP5G (SP5G... 79 2e-13
AB017527_1(AB017527|pid:none) Brassica napus BNTFL1-3 gene, comp... 78 3e-13
EU241935_1(EU241935|pid:none) Zea mays ZCN20 (ZCN20) mRNA, parti... 78 3e-13
EU178860_1(EU178860|pid:none) Ipomoea nil FT-like protein (FT2) ... 78 3e-13
EU241906_1(EU241906|pid:none) Zea mays ZCN15 (ZCN15) gene, compl... 78 3e-13
DQ309592_1(DQ309592|pid:none) Lolium perenne FT3 gene, complete ... 77 4e-13
AC116949_14(AC116949|pid:none) Oryza sativa (japonica cultivar-g... 77 4e-13
AE016819_928(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 77 6e-13
EU807885_1(EU807885|pid:none) Malus fusca terminal flower 1 (TFL... 77 6e-13
EU368121_1(EU368121|pid:none) Triticum aestivum cultivar Yangmai... 77 6e-13
EU807883_1(EU807883|pid:none) Malus baccata cultivar Rosthern te... 77 6e-13
AY705794_1(AY705794|pid:none) Triticum aestivum flowering locus ... 77 6e-13
AB162049_1(AB162049|pid:none) Cydonia oblonga CoTFL1-2 gene for ... 77 7e-13
AL034365_5(AL034365|pid:none) Caenorhabditis elegans YAC Y69E1A,... 77 7e-13
AB162046_1(AB162046|pid:none) Malus x domestica MdTFL1-2 gene fo... 77 7e-13
AF159883_1(AF159883|pid:none) Oryza sativa Cen-like protein FDR1... 76 1e-12
EU026441_1(EU026441|pid:none) Gossypium hirsutum cultivar DP-388... 76 1e-12
EU807884_1(EU807884|pid:none) Malus floribunda cultivar Hillieri... 76 1e-12
EU241916_1(EU241916|pid:none) Zea mays ZCN26 (ZCN26) gene, compl... 76 1e-12
AB447465_1(AB447465|pid:none) Hordeum vulgare HvTFL1 mRNA for ho... 76 1e-12
AP003105_15(AP003105|pid:none) Oryza sativa Japonica Group genom... 76 1e-12
EU241932_1(EU241932|pid:none) Zea mays ZCN17 (ZCN17) mRNA, compl... 76 1e-12
AB162047_1(AB162047|pid:none) Pyrus pyrifolia PpTFL1-2 mRNA for ... 76 1e-12
AB162051_1(AB162051|pid:none) Eriobotrya japonica EjTFL1-2 mRNA ... 76 1e-12
AJ888757_1(AJ888757|pid:none) Impatiens balsamina TFL1 gene for ... 76 1e-12
EU583502_1(EU583502|pid:none) Oncidium Gower Ramsey flowering lo... 76 1e-12
AJ888756_1(AJ888756|pid:none) Impatiens balsamina TFL1 gene for ... 75 2e-12
EU807888_1(EU807888|pid:none) Malus kansuensis terminal flower 1... 75 2e-12
DQ100327_1(DQ100327|pid:none) Hordeum vulgare subsp. vulgare FT-... 75 2e-12
BC078524_1(BC078524|pid:none) Xenopus laevis MGC85346 protein, m... 75 2e-12
AB017526_1(AB017526|pid:none) Brassica napus BNTFL1-2 gene, comp... 75 2e-12
EF086337_1(EF086337|pid:none) Picea sitchensis clone WS02738_C03... 75 2e-12
AB366637_1(AB366637|pid:none) Malus x domestica MdCENa gene for ... 75 2e-12
EU007827_1(EU007827|pid:none) Hordeum vulgare subsp. vulgare cul... 75 2e-12
EU241895_1(EU241895|pid:none) Zea mays ZCN4 (ZCN4) gene, complet... 75 2e-12
EU807890_1(EU807890|pid:none) Malus prunifolia cultivar Xanthoca... 75 2e-12
EU807894_1(EU807894|pid:none) Malus zumi cultivar Calocarpa term... 75 3e-12
CS301593_1(CS301593|pid:none) Sequence 1 from Patent WO2006005520. 75 3e-12
AP003682_10(AP003682|pid:none) Oryza sativa Japonica Group genom... 75 3e-12
EU200365_1(EU200365|pid:none) Gossypium hirsutum cultivar Maria ... 75 3e-12
AK072979_1(AK072979|pid:none) Oryza sativa Japonica Group cDNA c... 74 4e-12
EU026439_1(EU026439|pid:none) Gossypium raimondii cultivar Ulbri... 74 4e-12
AF316419_1(AF316419|pid:none) Lolium perenne terminal flower 1-l... 74 4e-12
AB426874_1(AB426874|pid:none) Oryza rufipogon RFT1 gene for FT-l... 74 4e-12
AB181183_1(AB181183|pid:none) Populus nigra PnTFL1a mRNA for ter... 74 4e-12
EU807891_1(EU807891|pid:none) Malus sieboldii terminal flower 1 ... 74 5e-12
AB426876_1(AB426876|pid:none) Oryza rufipogon RFT1 gene for FT-l... 74 6e-12
EU241897_1(EU241897|pid:none) Zea mays ZCN6 (ZCN6) gene, complet... 74 6e-12
AM453575_1(AM453575|pid:none) Vitis vinifera contig VV78X085999.... 74 6e-12
EU026435_1(EU026435|pid:none) Gossypium arboreum cultivar 79/B44... 74 6e-12
BT061406_1(BT061406|pid:none) Zea mays full-length cDNA clone ZM... 74 6e-12
AB426872_1(AB426872|pid:none) Oryza sativa Indica Group RFT1 gen... 74 6e-12
EU807872_1(EU807872|pid:none) Malus fusca terminal flower 1 (TFL... 73 8e-12
AB162041_1(AB162041|pid:none) Pyrus pyrifolia PpTFL1-1 mRNA for ... 73 8e-12
AB052994_1(AB052994|pid:none) Malus x domestica MdTFL1 mRNA for ... 73 8e-12
AB017530_1(AB017530|pid:none) Brassica oleracea BOTFL1-1 gene, p... 73 8e-12
AB162042_1(AB162042|pid:none) Pyrus communis PcTFL1-1 mRNA for T... 73 8e-12
AB062675_1(AB062675|pid:none) Oryza sativa Japonica Group RFT1 g... 73 8e-12
CQ832298_1(CQ832298|pid:none) Sequence 3 from Patent EP1439233. ... 73 1e-11
AB366638_1(AB366638|pid:none) Malus x domestica MdCENb gene for ... 73 1e-11
AB162045_1(AB162045|pid:none) Eriobotrya japonica EjTFL1-1 mRNA ... 73 1e-11
EU807876_1(EU807876|pid:none) Malus prattii terminal flower 1 (T... 73 1e-11
(Q5PQN9) RecName: Full=39S ribosomal protein L38, mitochondrial;... 72 1e-11
BC087096_1(BC087096|pid:none) Rattus norvegicus mitochondrial ri... 72 1e-11
EU807871_1(EU807871|pid:none) Malus floribunda cultivar Hillieri... 72 2e-11
FJ613328_1(FJ613328|pid:none) Sinapis alba flowering locus T mRN... 72 2e-11
(Q9XH43) RecName: Full=CEN-like protein 2; &AF145260_1(AF145260... 72 2e-11
EU241921_1(EU241921|pid:none) Zea mays ZCN5 (ZCN5) mRNA, complet... 71 3e-11
BT075611_1(BT075611|pid:none) Osmerus mordax clone omor-rgc-508-... 71 4e-11
AB217867_1(AB217867|pid:none) Ipomoea nil PnCE gene for CENTRORA... 71 4e-11
(Q3ZBF3) RecName: Full=39S ribosomal protein L38, mitochondrial;... 70 5e-11
AB162044_1(AB162044|pid:none) Pseudocydonia sinensis CsTFL1-1 mR... 70 5e-11
EU368120_1(EU368120|pid:none) Triticum aestivum cultivar Zhengma... 70 5e-11
AK110622_1(AK110622|pid:none) Oryza sativa Japonica Group cDNA c... 70 5e-11
AK159033_1(AK159033|pid:none) Mus musculus visual cortex cDNA, R... 70 7e-11
EU976588_1(EU976588|pid:none) Zea mays clone 984310 unknown mRNA. 70 7e-11
(Q8K2M0) RecName: Full=39S ribosomal protein L38, mitochondrial;... 70 7e-11
(Q06252) RecName: Full=Uncharacterized protein YLR179C; &S51424... 70 7e-11
BC091595_1(BC091595|pid:none) Xenopus tropicalis mitochondrial r... 70 9e-11
(Q5RDL7) RecName: Full=39S ribosomal protein L38, mitochondrial;... 70 9e-11
EU241893_1(EU241893|pid:none) Zea mays ZCN2 (ZCN2) gene, complet... 69 2e-10
AM162204_1(AM162204|pid:none) Misopates orontium cen gene for ce... 69 2e-10
AJ577367_1(AJ577367|pid:none) Triticum aestivum partial mRNA for... 69 2e-10
CR855176_4(CR855176|pid:none) Oryza sativa (indica cultivar-grou... 69 2e-10
(Q41261) RecName: Full=Protein CENTRORADIALIS; &S68507(S68507;S... 69 2e-10
AJ251993_1(AJ251993|pid:none) Antirrhinum majus CEN gene for cen... 69 2e-10
AB383154_1(AB383154|pid:none) Cucumis sativus CsTFL1b mRNA for T... 69 2e-10
AK313283_1(AK313283|pid:none) Homo sapiens cDNA, FLJ93795, Homo ... 69 2e-10
(Q9ZNV5) RecName: Full=Protein CENTRORADIALIS-like; &AB024712_1... 68 3e-10
EF428113_1(EF428113|pid:none) Triticum aestivum cultivar Chinese... 68 3e-10
X62105_1(X62105|pid:none) S.cerevisiae TFS1 gene. 68 3e-10
EF428112_1(EF428112|pid:none) Triticum aestivum cultivar Courtot... 68 3e-10
(P14306) RecName: Full=Carboxypeptidase Y inhibitor; Sh... 68 3e-10
DQ411320_1(DQ411320|pid:none) Hordeum vulgare subsp. vulgare FT-... 68 3e-10
AB288392_1(AB288392|pid:none) Streptogyna americana SaFT gene fo... 68 3e-10
(Q9S7R5) RecName: Full=Protein TWIN SISTER of FT; AltName: Full=... 67 5e-10
FJ042776_1(FJ042776|pid:none) Capsicum annuum fasciculate (FA) g... 67 6e-10
AK024058_1(AK024058|pid:none) Homo sapiens cDNA FLJ13996 fis, cl... 67 6e-10
(O82088) RecName: Full=Protein SELF-PRUNING; &T07877(T07877) &U... 67 6e-10
DQ307621_1(DQ307621|pid:none) Solanum tuberosum terminal flower ... 67 8e-10
FJ042775_1(FJ042775|pid:none) Capsicum frutescens fasciculate (F... 67 8e-10
AK243046_1(AK243046|pid:none) Oryza sativa Japonica Group cDNA, ... 67 8e-10
CR380948_39(CR380948|pid:none) Candida glabrata strain CBS138 ch... 65 2e-09
AB261109_1(AB261109|pid:none) Guaduella marantifolia gene for hy... 65 2e-09
EU807881_1(EU807881|pid:none) Malus zumi cultivar Calocarpa term... 65 2e-09
AB261123_1(AB261123|pid:none) Phyllostachys heteroclada gene for... 65 2e-09
AB261107_1(AB261107|pid:none) Pharus virescens gene for hypothet... 65 2e-09
AB261125_1(AB261125|pid:none) Phyllostachys aurea gene for hypot... 65 3e-09
EU241912_1(EU241912|pid:none) Zea mays ZCN21 (ZCN21) gene, compl... 64 4e-09
AB261124_1(AB261124|pid:none) Phyllostachys viridiglaucescens ge... 64 4e-09
CU633448_23(CU633448|pid:none) Podospora anserina genomic DNA ch... 64 5e-09
AB204809_1(AB204809|pid:none) Arabidopsis thaliana TSF gene for ... 64 5e-09
AK088343_1(AK088343|pid:none) Mus musculus 2 days neonate thymus... 64 7e-09
AB288393_1(AB288393|pid:none) Streptogyna crinita ScFT gene for ... 64 7e-09
EF428115_1(EF428115|pid:none) Triticum aestivum cultivar Chinese... 64 7e-09
AB240579_1(AB240579|pid:none) Phyllostachys aurea f. albovariega... 63 1e-08
AB261126_1(AB261126|pid:none) Olyra latifolia gene for hypotheti... 63 1e-08
AB261112_1(AB261112|pid:none) Aulonemia subpectinata gene for hy... 62 1e-08
AB261120_1(AB261120|pid:none) Phyllostachys glauca gene for hypo... 62 1e-08
EU956228_1(EU956228|pid:none) Zea mays clone 1559274 unknown mRNA. 62 2e-08
AB261113_1(AB261113|pid:none) Dendrocalamus asper gene for hypot... 62 2e-08
EF445635_1(EF445635|pid:none) Chenopodium rubrum flowering locus... 62 2e-08
AB383153_1(AB383153|pid:none) Cucumis sativus CsTFL1a mRNA for T... 62 2e-08
X15409_1(X15409|pid:none) Saccharomyces cerevisiae NSP1 gene for... 61 3e-08
AB261119_1(AB261119|pid:none) Sasa tsuboiana gene for hypothetic... 61 3e-08
AJ577366_1(AJ577366|pid:none) Triticum aestivum partial mRNA for... 60 7e-08
AB261111_1(AB261111|pid:none) Chusquea fendleri gene for hypothe... 59 1e-07
AB261121_1(AB261121|pid:none) Phyllostachys bissetii gene for hy... 59 2e-07
AF372624_1(AF372624|pid:none) Homo sapiens PEBP-like protein (HS... 58 4e-07
AB261118_1(AB261118|pid:none) Sasa senanensis gene for hypotheti... 58 4e-07
EU860369_1(EU860369|pid:none) Olea europaea FT-like protein mRNA... 57 6e-07
EU968676_1(EU968676|pid:none) Zea mays clone 323326 unknown mRNA. 57 8e-07
AE013599_1790(AE013599|pid:none) Drosophila melanogaster chromos... 57 8e-07
T48789(T48789)TFS1 related protein [imported] - Neurospora crassa 55 2e-06
DQ215444_1(DQ215444|pid:none) Taeniopygia guttata clone 0058P001... 54 4e-06
AL353820_20(AL353820|pid:none) Neurospora crassa DNA linkage gro... 54 5e-06
AB027505_1(AB027505|pid:none) Arabidopsis thaliana FT (FLOWERING... 53 9e-06
EF428114_1(EF428114|pid:none) Triticum aestivum cultivar Courtot... 53 1e-05
AY268091_1(AY268091|pid:none) Arabidopsis thaliana terminal flow... 52 3e-05
FN357420_7(FN357420|pid:none) Schistosoma mansoni genome sequenc... 51 4e-05
EF643243_1(EF643243|pid:none) Phaseolus vulgaris cultivar Midas ... 49 2e-04
(P54189) RecName: Full=Putative phosphatidylethanolamine-binding... 48 3e-04
EF643246_1(EF643246|pid:none) Phaseolus vulgaris cultivar Jalo E... 48 4e-04
CP000053_1322(CP000053|pid:none) Rickettsia felis URRWXCal2, com... 48 4e-04
AY170872_1(AY170872|pid:none) Metrosideros excelsa terminal flow... 47 5e-04
CU928169_162(CU928169|pid:none) Kluyveromyces thermotolerans str... 47 6e-04
AM055943_60(AM055943|pid:none) Toxoplasma gondii RH, genomic DNA... 47 6e-04
AB261122_1(AB261122|pid:none) Phyllostachys praecox gene for hyp... 47 6e-04
AP008207_2510(AP008207|pid:none) Oryza sativa (japonica cultivar... 47 6e-04
CP001080_680(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 46 0.001
AM920436_1807(AM920436|pid:none) Penicillium chrysogenum Wiscons... 46 0.001
CP000675_2293(CP000675|pid:none) Legionella pneumophila str. Cor... 46 0.001
AY170873_1(AY170873|pid:none) Metrosideros collina terminal flow... 46 0.001
BT077401_1(BT077401|pid:none) Lepeophtheirus salmonis clone lsal... 45 0.002
BX842620_10(BX842620|pid:none) Neurospora crassa DNA linkage gro... 45 0.003
CP001102_363(CP001102|pid:none) Candidatus Amoebophilus asiaticu... 44 0.004
CP000766_1298(CP000766|pid:none) Rickettsia rickettsii str. Iowa... 44 0.004
AB261116_1(AB261116|pid:none) Sasa nipponica gene for hypothetic... 44 0.004
AP011115_627(AP011115|pid:none) Rhodococcus opacus B4 DNA, compl... 44 0.005
CP000431_888(CP000431|pid:none) Rhodococcus jostii RHA1, complet... 44 0.005
CR382131_1327(CR382131|pid:none) Yarrowia lipolytica strain CLIB... 44 0.005
CP000683_910(CP000683|pid:none) Rickettsia massiliae MTU5, compl... 44 0.007
CP001099_608(CP001099|pid:none) Chlorobaculum parvum NCIB 8327, ... 43 0.009
(P67226) RecName: Full=UPF0098 protein Rv2140c/MT2198; &(P67227... 43 0.009
AE017354_2166(AE017354|pid:none) Legionella pneumophila subsp. p... 43 0.012
AE006470_595(AE006470|pid:none) Chlorobium tepidum TLS, complete... 43 0.012
CP000021_940(CP000021|pid:none) Vibrio fischeri ES114 chromosome... 43 0.012
EF643249_1(EF643249|pid:none) Phaseolus vulgaris cultivar BAT93 ... 42 0.016
EF643248_1(EF643248|pid:none) Phaseolus vulgaris genotype G12873... 42 0.016
AB369073_1(AB369073|pid:none) Populus nigra PnFTL9 gene for hypo... 42 0.020
CP000479_2671(CP000479|pid:none) Mycobacterium avium 104, comple... 42 0.020
CR628336_2164(CR628336|pid:none) Legionella pneumophila str. Par... 42 0.020
AP009179_961(AP009179|pid:none) Sulfurovum sp. NBC37-1 genomic D... 42 0.020
CP000698_1625(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 42 0.020
CP000127_1526(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 42 0.020
CP000682_2014(CP000682|pid:none) Metallosphaera sedula DSM 5348,... 42 0.026
AB204806_1(AB204806|pid:none) Arabidopsis thaliana TSF gene for ... 42 0.026
CP000975_1064(CP000975|pid:none) Methylacidiphilum infernorum V4... 41 0.035
AF248314_3(AF248314|pid:none) Uncultured bacterium pCosAS1 uroca... 41 0.035
DQ317425_1(DQ317425|pid:none) Panicum miliaceum CEN-like protein... 41 0.035
AP008215_1103(AP008215|pid:none) Oryza sativa (japonica cultivar... 41 0.035
DQ317428_1(DQ317428|pid:none) Setaria italica CEN-like protein (... 41 0.035
DQ317426_1(DQ317426|pid:none) Sorghum halepense CEN-like protein... 41 0.035
CT573213_3892(CT573213|pid:none) Frankia alni str. ACN14A chromo... 41 0.035
FN392322_933(FN392322|pid:none) Pichia pastoris GS115 chromosome... 41 0.045
CP000961_1900(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 41 0.045
AB261117_1(AB261117|pid:none) Sasa jotanii gene for hypothetical... 41 0.045
CP000851_1244(CP000851|pid:none) Shewanella pealeana ATCC 700345... 40 0.059
DQ849290_1(DQ849290|pid:none) Beta vulgaris subsp. maritima infl... 40 0.059
CP000444_279(CP000444|pid:none) Shewanella sp. MR-7, complete ge... 40 0.059
(Q06678) RecName: Full=54S ribosomal protein L35, mitochondrial;... 40 0.077
AE014613_1967(AE014613|pid:none) Salmonella enterica subsp. ente... 40 0.077
AY340580_1(AY340580|pid:none) Pisum sativum TFL1b (TFL1b) gene, ... 40 0.077
CP000886_2661(CP000886|pid:none) Salmonella enterica subsp. ente... 40 0.077
CP001127_876(CP001127|pid:none) Salmonella enterica subsp. enter... 40 0.077
AP009152_1969(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 40 0.077
CP000026_1830(CP000026|pid:none) Salmonella enterica subsp. ente... 40 0.077
CR931997_960(CR931997|pid:none) Corynebacterium jeikeium K411 co... 40 0.10
AP007161_269(AP007161|pid:none) Aspergillus oryzae RIB40 genomic... 40 0.10
CP000822_2298(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 40 0.10
(O67293) RecName: Full=UPF0098 protein aq_1250; &AE000657_867(A... 40 0.10
CP000077_841(CP000077|pid:none) Sulfolobus acidocaldarius DSM 63... 40 0.10
CP001390_325(CP001390|pid:none) Geobacter sp. FRC-32, complete g... 40 0.10
AM746676_5445(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 39 0.13
CP001390_1152(CP001390|pid:none) Geobacter sp. FRC-32, complete ... 39 0.13
CR628336_1409(CR628336|pid:none) Legionella pneumophila str. Par... 39 0.13
FP236842_2402(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 39 0.13
AM260480_1102(AM260480|pid:none) Ralstonia eutropha H16 chromoso... 39 0.13
AE017220_790(AE017220|pid:none) Salmonella enterica subsp. enter... 39 0.17
CP000964_3709(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 39 0.17
CU468135_2269(CU468135|pid:none) Erwinia tasmaniensis strain ET1... 39 0.17
CP000698_265(CP000698|pid:none) Geobacter uraniireducens Rf4, co... 39 0.17
EU953925_1(EU953925|pid:none) Zea mays clone 1449677 unknown mRNA. 39 0.17
CP000099_2720(CP000099|pid:none) Methanosarcina barkeri str. Fus... 39 0.17
CP000783_2511(CP000783|pid:none) Enterobacter sakazakii ATCC BAA... 39 0.22
AE016958_1885(AE016958|pid:none) Mycobacterium avium subsp. para... 39 0.22
CP000148_1001(CP000148|pid:none) Geobacter metallireducens GS-15... 39 0.22
CP000142_1506(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 39 0.22
CP000325_1956(CP000325|pid:none) Mycobacterium ulcerans Agy99, c... 39 0.22
(O14341) RecName: Full=60S ribosomal protein L35, mitochondrial;... 38 0.29
AP006618_2924(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 38 0.29
AE017283_2080(AE017283|pid:none) Propionibacterium acnes KPA1712... 38 0.29
AF024666_8(AF024666|pid:none) Corynebacterium striatum strain M8... 38 0.29
CP000090_1168(CP000090|pid:none) Ralstonia eutropha JMP134 chrom... 38 0.29
(Q9Z729) RecName: Full=UPF0098 protein CPn_0877/CP_0992/CPj0877/... 38 0.29
AE006468_1050(AE006468|pid:none) Salmonella enterica subsp. ente... 38 0.29
(P12994) RecName: Full=UPF0098 protein ybhB; &A38246_4(A38246|p... 38 0.38
CP000282_1504(CP000282|pid:none) Saccharophagus degradans 2-40, ... 38 0.38
AM270415_39(AM270415|pid:none) Aspergillus niger contig An19c001... 38 0.38
CP000943_1605(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 38 0.38
CP000462_3032(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 38 0.38
CP000036_603(CP000036|pid:none) Shigella boydii Sb227, complete ... 38 0.38
BA000038_1422(BA000038|pid:none) Vibrio vulnificus YJ016 DNA, ch... 38 0.38
J04423_1(J04423|pid:none) E.coli 7,8-diamino-pelargonic acid (bi... 38 0.38
AE016796_868(AE016796|pid:none) Vibrio vulnificus CMCP6 chromoso... 38 0.38
AF250776_1(AF250776|pid:none) Uncultured bacterium pCosHE2 hypot... 38 0.38
CP001113_1055(CP001113|pid:none) Salmonella enterica subsp. ente... 38 0.38
CP000300_923(CP000300|pid:none) Methanococcoides burtonii DSM 62... 38 0.38
AB303062_11(AB303062|pid:none) Escherichia coli O103:H2 genes fo... 38 0.38
EF084556_1(EF084556|pid:none) Picea sitchensis clone WS0271_L14 ... 37 0.50
CP000739_693(CP000739|pid:none) Sinorhizobium medicae WSM419 pla... 37 0.50
AE017220_1033(AE017220|pid:none) Salmonella enterica subsp. ente... 37 0.50
CP001154_2480(CP001154|pid:none) Laribacter hongkongensis HLHK9,... 37 0.50
CP001138_971(CP001138|pid:none) Salmonella enterica subsp. enter... 37 0.50
CU928164_744(CU928164|pid:none) Escherichia coli IAI39 chromosom... 37 0.50
AE014075_823(AE014075|pid:none) Escherichia coli CFT073, complet... 37 0.50
CP000239_2137(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 37 0.50
A99226(A99226) conserved hypothetical protein [imported] - Sulfo... 37 0.50
CR555306_3641(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 37 0.50
CP001404_1363(CP001404|pid:none) Sulfolobus islandicus Y.N.15.51... 37 0.65
AE017347_465(AE017347|pid:none) Cryptococcus neoformans var. neo... 37 0.65
CP000826_1302(CP000826|pid:none) Serratia proteamaculans 568, co... 37 0.65
EU707394_1(EU707394|pid:none) Euphorbia esula flowering locus T ... 37 0.85
DQ317431_1(DQ317431|pid:none) Flagellaria indica CEN-like protei... 37 0.85
CP000285_2344(CP000285|pid:none) Chromohalobacter salexigens DSM... 37 0.85
EU559167_122(EU559167|pid:none) Candidatus Nitrospira defluvii C... 37 0.85
CP001400_1237(CP001400|pid:none) Sulfolobus islandicus M.14.25, ... 37 0.85
CP001344_2410(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 37 0.85
CP000155_2683(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 36 1.1
CP000453_1603(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-... 36 1.1
CP001037_187(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 36 1.1
AM889285_874(AM889285|pid:none) Gluconacetobacter diazotrophicus... 36 1.1
CP000910_89(CP000910|pid:none) Renibacterium salmoninarum ATCC 3... 36 1.1
CP000270_1075(CP000270|pid:none) Burkholderia xenovorans LB400 c... 36 1.1
AE015925_877(AE015925|pid:none) Chlamydophila caviae GPIC, compl... 36 1.1
CP000851_2261(CP000851|pid:none) Shewanella pealeana ATCC 700345... 36 1.5
CR931997_363(CR931997|pid:none) Corynebacterium jeikeium K411 co... 36 1.5
CP000505_935(CP000505|pid:none) Thermofilum pendens Hrk 5, compl... 36 1.5
CP001403_1342(CP001403|pid:none) Sulfolobus islandicus Y.G.57.14... 36 1.5
CP000115_2600(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 36 1.5
CP001087_4270(CP001087|pid:none) Desulfobacterium autotrophicum ... 36 1.5
(Q9X9Z8) RecName: Full=UPF0098 protein SCO1794; &AL939110_97(AL... 35 1.9
(P67224) RecName: Full=UPF0098 protein Rv1911c/MT1962; &(P67225... 35 1.9
AM408590_1953(AM408590|pid:none) Mycobacterium bovis BCG Pasteur... 35 1.9
AY596297_749(AY596297|pid:none) Haloarcula marismortui ATCC 4304... 35 1.9
CP000667_4059(CP000667|pid:none) Salinispora tropica CNB-440, co... 35 1.9
CU694393_428(CU694393|pid:none) Ralstonia solanacearum strain Mo... 35 2.5
CP000931_2550(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 35 2.5
CP001389_3626(CP001389|pid:none) Rhizobium sp. NGR234, complete ... 35 2.5
CU914166_108(CU914166|pid:none) Ralstonia solanacearum strain IP... 35 2.5
CP000934_422(CP000934|pid:none) Cellvibrio japonicus Ueda107, co... 35 2.5
FM954973_819(FM954973|pid:none) Vibrio splendidus LGP32 chromoso... 35 2.5
AY176684_1(AY176684|pid:none) Brassica rapa subsp. pekinensis fl... 35 3.2
CP001100_71(CP001100|pid:none) Chloroherpeton thalassium ATCC 35... 35 3.2
EF422350_1(EF422350|pid:none) Chenopodium rubrum clone CrubFTL1 ... 35 3.2
DQ153045_1(DQ153045|pid:none) Musa AAB Group flowering transitio... 35 3.2
AF021845_1(AF021845|pid:none) Eulemur fulvus RH30-like polypepti... 35 3.2
CP000113_385(CP000113|pid:none) Myxococcus xanthus DK 1622, comp... 34 4.2
CP001438_1(CP001438|pid:none) Borrelia valaisiana VS116 plasmid ... 34 4.2
CP000269_721(CP000269|pid:none) Janthinobacterium sp. Marseille,... 34 4.2
AE017261_98(AE017261|pid:none) Picrophilus torridus DSM 9790, co... 34 4.2
AE000516_2014(AE000516|pid:none) Mycobacterium tuberculosis CDC1... 34 4.2
CR848038_840(CR848038|pid:none) Chlamydophila abortus strain S26... 34 4.2
AY271513_1(AY271513|pid:none) Arabidopsis thaliana transgenic te... 34 4.2
AE010299_1393(AE010299|pid:none) Methanosarcina acetivorans str.... 34 4.2
AM408590_1952(AM408590|pid:none) Mycobacterium bovis BCG Pasteur... 34 4.2
CP000454_110(CP000454|pid:none) Arthrobacter sp. FB24, complete ... 34 4.2
EF422345_1(EF422345|pid:none) Chenopodium hybridum clone Chyb760... 34 4.2
(Q9PLJ0) RecName: Full=UPF0098 protein TC_0109; &AE002160_107(A... 34 5.5
CP001131_796(CP001131|pid:none) Anaeromyxobacter sp. K, complete... 34 5.5
CT573213_32(CT573213|pid:none) Frankia alni str. ACN14A chromoso... 34 5.5
CR382137_688(CR382137|pid:none) Debaryomyces hansenii strain CBS... 34 5.5
(O84741) RecName: Full=UPF0098 protein CT_736; &AE001273_753(AE... 34 5.5
CP000563_4011(CP000563|pid:none) Shewanella baltica OS155, compl... 34 5.5
FJ770268_1(FJ770268|pid:none) Lolium perenne genotype NV#20/F1-3... 34 5.5
CP001359_798(CP001359|pid:none) Anaeromyxobacter dehalogenans 2C... 33 7.2
CP000383_2997(CP000383|pid:none) Cytophaga hutchinsonii ATCC 334... 33 7.2
AP008955_2167(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 33 7.2
EU684546_1(EU684546|pid:none) Mycobacterium avium subsp. paratub... 33 7.2
AM270195_4(AM270195|pid:none) Aspergillus niger contig An09c0060... 33 9.4
CP000613_3097(CP000613|pid:none) Rhodospirillum centenum SW, com... 33 9.4
CP001132_1580(CP001132|pid:none) Acidithiobacillus ferrooxidans ... 33 9.4
AM480090_5(AM480090|pid:none) Vitis vinifera contig VV78X100082.... 33 9.4
CP000851_1593(CP000851|pid:none) Shewanella pealeana ATCC 700345... 33 9.4

>DQ443265_1(DQ443265|pid:none) Bombyx mori phosphatidylethanolamine
binding protein isoform 2 mRNA, complete cds.
Length = 195

Score = 181 bits (459), Expect = 2e-44
Identities = 92/190 (48%), Positives = 127/190 (66%), Gaps = 3/190 (1%)
Frame = +2

Query: 26 MLRKMETVIKAL-AENKISDVISFTPKKLLTVKY-NGKELNINDTLTPTIVQNKPHVSWD 199
+ R M TV K+ A + DVI P LL VKY +G E+ + LTPT V+++P V WD
Sbjct: 7 LTRAMSTVAKSFEASQVVPDVIPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWD 66

Query: 200 AKNDELYTLIFDDPDAPTRSDPKFGQWKHWLVTNIKGNDISTGQELAKYIGSGPPPKTGL 379
A+ + YTL DPDAP+R +P F +W HWLV NI+GN++++G+ L++Y+GSGPP KTGL
Sbjct: 67 AEPGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQGNEVNSGETLSQYVGSGPPEKTGL 126

Query: 380 HRYIFILCKQPGTENIEFKGEHILPLSAELRNNWNAETFIKKWNL-EPEAINFYQAEYDD 556
HRY+F+L KQP + F + S++ R N+ F KK+NL +P A NFY+A+YDD
Sbjct: 127 HRYVFLLYKQP--SKLTFDEPRLTNTSSDKRANFKIAEFAKKYNLGDPIAGNFYEAQYDD 184

Query: 557 YVPQLYAKLG 586
YVP LY +LG
Sbjct: 185 YVPILYKQLG 194

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,112,616,538
Number of extensions: 22745900
Number of successful extensions: 65916
Number of sequences better than 10.0: 431
Number of HSP's gapped: 65447
Number of HSP's successfully gapped: 432
Length of query: 248
Length of database: 1,040,966,779
Length adjustment: 125
Effective length of query: 123
Effective length of database: 640,431,154
Effective search space: 78773031942
Effective search space used: 78773031942
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.63 gvh: 0.29 alm: 0.50 top: 0.53 tms: 0.00 mit: 0.27 mip: 0.02
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

44.0 %: cytoplasmic
28.0 %: nuclear
16.0 %: mitochondrial
8.0 %: cytoskeletal
4.0 %: extracellular, including cell wall

>> prediction for Contig-U06627-1 is cyt

VS (DIR, S) 2
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0