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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U06595-1
Contig ID Contig-U06595-1
Contig update 2001. 8.30
Contig sequence 
>Contig-U06595-1 (Contig-U06595-1Q) /CSM_Contig/Contig-U06595-1Q.Seq.d
CAAAAAAAGTCCTCACAGCATACAATGCAATAGATCATACATATTTTTCT
CAGTTATCACAAAGAAACAAAGCCTTATATATGTATAGAAGTATATTAAG
ATTAGCAAATAAATGGGAATCAGATTCACAAAGAGAAGACATTAGATATG
AAACAAGATCCACATTTCAAAAGAATAAAGATTTAACAGACACCGAAATT
ATAAATGATAAAATTGAAGAAGCTAGATCAAGAATGTTAACTGCACTTCA
TTATAATATACCATATGAAAAAAAGAAATATAATATTCCTAAATATCAAA
TTCAAATGAAACCACCACCAGATCCAAAAGATGAATCTGGAATTTGTTAA
TAAATAATATTGAAAATAATAAAATCAAAAAGATATAAGTTGTAATATAA
AAAAAAA
Gap no gap
Contig length 407
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 5212140
End point 5211733
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 2
Link to clone list U06595
List of clone(s) 

est1=VSD747F,1,408
est2=VSD747Z,1,272
Translated Amino Acid sequence 
KKVLTAYNAIDHTYFSQLSQRNKALYMYRSILRLANKWESDSQREDIRYETRSTFQKNKD
LTDTEIINDKIEEARSRMLTALHYNIPYEKKKYNIPKYQIQMKPPPDPKDESGIC**iil
kiikskrykl*ykkk
Translated Amino Acid sequence (All Frames) 
Frame A:
qkkssqhtmq*iihiflsyhketkpyicievy*d*qingnqihkektldmkqdphfkrik
i*qtpkl*miklkkldqec*lhfiiiyhmkkrniiflnikfk*nhhqiqkmnlefvnk*y
*k**nqkdiscnikk


Frame B:
kksphsiqcnrsyiffsvitkkqsliyv*kyikisk*mgirftkrrh*i*nkihiske*r
fnrhrnyk**n*rs*iknvnctsl*yti*kkei*ys*isnsnetttrskr*iwnllinni
ennkikki*vvi*kk


Frame C:
KKVLTAYNAIDHTYFSQLSQRNKALYMYRSILRLANKWESDSQREDIRYETRSTFQKNKD
LTDTEIINDKIEEARSRMLTALHYNIPYEKKKYNIPKYQIQMKPPPDPKDESGIC**iil
kiikskrykl*ykkk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U06595-1 (Contig-U06595-1Q)
/CSM_Contig/Contig-U06595-1Q.Seq.d
         (407 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U06595-1 (Contig-U06595-1Q) /CSM_Contig/Conti...   628  e-180
Contig-U11753-1 (Contig-U11753-1Q) /CSM_Contig/Conti...    38  0.007
Contig-U08974-1 (Contig-U08974-1Q) /CSM_Contig/Conti...    38  0.007
Contig-U13989-1 (Contig-U13989-1Q) /CSM_Contig/Conti...    36  0.028
Contig-U13233-1 (Contig-U13233-1Q) /CSM_Contig/Conti...    34  0.11
Contig-U12835-1 (Contig-U12835-1Q) /CSM_Contig/Conti...    34  0.11
Contig-U12537-1 (Contig-U12537-1Q) /CSM_Contig/Conti...    34  0.11
Contig-U12389-1 (Contig-U12389-1Q) /CSM_Contig/Conti...    34  0.11
Contig-U11967-1 (Contig-U11967-1Q) /CSM_Contig/Conti...    34  0.11
Contig-U01876-1 (Contig-U01876-1Q) /CSM_Contig/Conti...    30  1.7

>Contig-U06595-1 (Contig-U06595-1Q) /CSM_Contig/Contig-U06595-1Q.Seq.d
          Length = 407

 Score =  628 bits (317), Expect = e-180
 Identities = 331/338 (97%)
 Strand = Plus / Plus

                                                                       
Query: 9   gtcctcacagcatacaatgcaatagatcatacatatttttctcagttatcacaaagaaac 68
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   gtcctcacagcatacaatgcaatagatcatacatatttttctcagttatcacaaagaaac 68

                                                                       
Query: 69  aaagccttatatatgtatagaagtatattaagattagcaaataaatgggaatcagattca 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaagccttatatatgtatagaagtatattaagattagcaaataaatgggaatcagattca 128

                                                                       
Query: 129 caaagagaagacattagatatgaaacaagatccacatttcaaaagaataaagatttaaca 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 caaagagaagacattagatatgaaacaagatccacatttcaaaagaataaagatttaaca 188

                                                                       
Query: 189 gacaccgaaattataaatgataaaattgaagaagctagatcaagaatgttaactgcactt 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gacaccgaaattataaatgataaaattgaagaagctagatcaagaatgttaactgcactt 248

                                                                       
Query: 249 cattataatataccatatgnnnnnnngaaatataatattcctaaatatcaaattcaaatg 308
           |||||||||||||||||||       ||||||||||||||||||||||||||||||||||
Sbjct: 249 cattataatataccatatgaaaaaaagaaatataatattcctaaatatcaaattcaaatg 308

                                                 
Query: 309 aaaccaccaccagatccaaaagatgaatctggaatttg 346
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aaaccaccaccagatccaaaagatgaatctggaatttg 346


>Contig-U11753-1 (Contig-U11753-1Q) /CSM_Contig/Contig-U11753-1Q.Seq.d
          Length = 2111

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 166 ttcaaaagaataaagattt 184
           |||||||||||||||||||
Sbjct: 447 ttcaaaagaataaagattt 465


>Contig-U08974-1 (Contig-U08974-1Q) /CSM_Contig/Contig-U08974-1Q.Seq.d
          Length = 845

 Score = 38.2 bits (19), Expect = 0.007
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 200 tataaatgataaaattgaa 218
           |||||||||||||||||||
Sbjct: 545 tataaatgataaaattgaa 563


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5067
Number of Sequences: 6905
Number of extensions: 5067
Number of successful extensions: 570
Number of sequences better than 10.0: 201
length of query: 407
length of database: 5,674,871
effective HSP length: 16
effective length of query: 391
effective length of database: 5,564,391
effective search space: 2175676881
effective search space used: 2175676881
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2008.11. 9
Homology vs DNA 
Query= Contig-U06595-1 (Contig-U06595-1Q) /CSM_Contig/Contig-U06595-1Q.Seq.d
         (407 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU264507) Dictyostelium discoideum vegetative cDNA clone:VS...   513   e-178  2
(AU264508) Dictyostelium discoideum vegetative cDNA clone:VS...   513   e-141  1
(AC087397) Homo sapiens chromosome 18, clone RP11-594P16, co...    40   0.15   4
(ER409725) 1095368013934 Global-Ocean-Sampling_GS-34-01-01-1...    48   0.24   1
(AE014133) Streptococcus mutans UA159, complete genome.            48   0.24   1
(AC173481) Mus musculus BAC clone RP23-411A24 from chromosom...    46   0.96   1
(AC159228) Mus musculus BAC clone RP24-338I14 from chromosom...    46   0.96   1
(DX466060) Cpl07924 Papaya Genomic DNA BAC Library Carica pa...    46   0.96   1
(AE016823) Leptospira interrogans serovar Copenhageni str. F...    46   0.96   1
(AE010300) Leptospira interrogans serovar lai str. 56601 chr...    46   0.96   1
(CT556612) A BAC library has been constructed from cultivar ...    40   1.2    2
(BX927305) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    42   1.7    3
(AC055807) Homo sapiens chromosome 15, clone RP11-262P8, com...    40   1.7    3
(CT967304) M.truncatula DNA sequence from clone MTH2-36C8 on...    44   3.8    1
(CT573026) M.truncatula DNA sequence from clone MTH2-39M4 on...    44   3.8    1
(AP004967) Lotus japonicus genomic DNA, chromosome 1, clone:...    44   3.8    1
(AM460427) Vitis vinifera contig VV78X219843.14, whole genom...    44   3.8    1
(AC148776) Medicago truncatula clone mth2-39g6, complete seq...    44   3.8    1
(AC130653) Medicago truncatula clone mth1-13b3, complete seq...    44   3.8    1
(AC108013) Homo sapiens BAC clone RP13-538M20 from 4, comple...    44   3.8    1
(AC142181) Rattus norvegicus clone CH230-472G17, WORKING DRA...    44   3.8    1
(AC172957) Bos taurus clone CH240-279L9, WORKING DRAFT SEQUE...    44   3.8    1
(EJ885250) 1093018414119 Global-Ocean-Sampling_GS-30-02-01-1...    44   3.8    1
(EX685495) JS7BT37JG Salt and heat stressed Fragaria vesca (...    44   3.8    1
(EX684853) JS7BK27JG Salt and heat stressed Fragaria vesca (...    44   3.8    1
(EX684807) JS7BJ60JG Salt and heat stressed Fragaria vesca (...    44   3.8    1
(EX681839) JS7AE22JG Salt and heat stressed Fragaria vesca (...    44   3.8    1
(EX678515) JS5BR21JG Draught stressed Fragaria vesca (strain...    44   3.8    1
(EX675087) JS5AA65JG Draught stressed Fragaria vesca (strain...    44   3.8    1
(EX674685) JS5A485JG Draught stressed Fragaria vesca (strain...    44   3.8    1
(EX674466) JS5A216JG Draught stressed Fragaria vesca (strain...    44   3.8    1
(EX674293) JS5A011JG Draught stressed Fragaria vesca (strain...    44   3.8    1
(EX673919) JS3CR60JG Heat stressed Fragaria vesca (strain Ha...    44   3.8    1
(EX672972) JS3CG65JG Heat stressed Fragaria vesca (strain Ha...    44   3.8    1
(EX672637) JS3CC68JG Heat stressed Fragaria vesca (strain Ha...    44   3.8    1
(EX671846) JS3C342JG Heat stressed Fragaria vesca (strain Ha...    44   3.8    1
(EX663087) JS1C506JG Salt stressed Fragaria vesca (strain Ha...    44   3.8    1
(EX661899) JS1BQ83JG Salt stressed Fragaria vesca (strain Ha...    44   3.8    1
(EX661577) JS1BN09JG Salt stressed Fragaria vesca (strain Ha...    44   3.8    1
(EX661485) JS1BM03JG Salt stressed Fragaria vesca (strain Ha...    44   3.8    1
(EX661469) JS1BL82JG Salt stressed Fragaria vesca (strain Ha...    44   3.8    1
(EX658346) JS1AL35JG Salt stressed Fragaria vesca (strain Ha...    44   3.8    1
(EK125439) 1092976900317 Global-Ocean-Sampling_GS-31-01-01-1...    36   4.0    2
(EK377876) 1095469447460 Global-Ocean-Sampling_GS-31-01-01-1...    36   4.3    2
(AY332722) Homo sapiens insulin-like growth factor 1 recepto...    40   4.3    3
(CT011574) KBrH119P05 genomic clone, KBrH (HindIII) BAC libr...    40   4.4    2
(AR611316) Sequence 31 from patent US 6825336.                     40   4.4    3
(AR611319) Sequence 34 from patent US 6825336.                     40   4.4    3
(DD148295) Method for testing of predisposition to hypertens...    40   4.4    3
(EK152225) 1095456057220 Global-Ocean-Sampling_GS-31-01-01-1...    36   4.5    2
(CT622208) Danio rerio EST, clone ZF_mu_67f07 5'.                  40   4.5    2
(CS741855) Sequence 9851 from Patent WO2005083127.                 40   4.6    3
(CQ926631) Sequence 1664 from Patent WO2004083403.                 40   4.6    3
(DU127490) KBrH108O18R Brassica rapa BAC library KBrH Brassi...    40   4.6    2
(CQ869856) Sequence 277 from Patent WO2004074320.                  40   4.8    3
(AP005612) Oryza sativa Japonica Group genomic DNA, chromoso...    40   5.8    3
(CU457717) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   5.9    4
(ES405684) MUT15-G09.y1d-s SHGC-MUT Mytilus californianus cD...    40   6.5    2
(AL713933) Oryza sativa chromosome 12, . BAC OJ1041_D02 of l...    40   7.5    2
(CR855211) Oryza sativa genomic DNA, chromosome 4, BAC clone...    40   8.4    2
(AC174566) Bos taurus clone CH240-312H19, WORKING DRAFT SEQU...    36   8.4    6
(AM437041) Vitis vinifera contig VV78X263242.7, whole genome...    38   9.1    2
(BA000021) Wigglesworthia glossinidia endosymbiont of Glossi...    38   9.6    9

>(AU264507) Dictyostelium discoideum vegetative cDNA clone:VSD747,
           5' end single read.
          Length = 408

 Score =  513 bits (259), Expect(2) = e-178
 Identities = 259/259 (100%)
 Strand = Plus / Plus


Query: 9   gtcctcacagcatacaatgcaatagatcatacatatttttctcagttatcacaaagaaac 68
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   gtcctcacagcatacaatgcaatagatcatacatatttttctcagttatcacaaagaaac 68


Query: 69  aaagccttatatatgtatagaagtatattaagattagcaaataaatgggaatcagattca 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  aaagccttatatatgtatagaagtatattaagattagcaaataaatgggaatcagattca 128


Query: 129 caaagagaagacattagatatgaaacaagatccacatttcaaaagaataaagatttaaca 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 caaagagaagacattagatatgaaacaagatccacatttcaaaagaataaagatttaaca 188


Query: 189 gacaccgaaattataaatgataaaattgaagaagctagatcaagaatgttaactgcactt 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gacaccgaaattataaatgataaaattgaagaagctagatcaagaatgttaactgcactt 248


Query: 249 cattataatataccatatg 267
           |||||||||||||||||||
Sbjct: 249 cattataatataccatatg 267

 Score =  145 bits (73), Expect(2) = e-178
 Identities = 73/73 (100%)
 Strand = Plus / Plus


Query: 275 gaaatataatattcctaaatatcaaattcaaatgaaaccaccaccagatccaaaagatga 334
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gaaatataatattcctaaatatcaaattcaaatgaaaccaccaccagatccaaaagatga 334


Query: 335 atctggaatttgt 347
           |||||||||||||
Sbjct: 335 atctggaatttgt 347

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 457,425,083
Number of extensions: 30501465
Number of successful extensions: 2493784
Number of sequences better than 10.0: 64
Length of query: 407
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 384
Effective length of database: 93,106,754,628
Effective search space: 35752993777152
Effective search space used: 35752993777152
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
protein update 2009. 6.22
Homology vs Protein 
Query= Contig-U06595-1 (Contig-U06595-1Q) /CSM_Contig/Contig-U06595-1Q.Seq.d
         (407 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AX884968_1(AX884968|pid:none) Sequence 831 from Patent EP1033401.      66   3e-10
(O43325) RecName: Full=LYR motif-containing protein 1;  &AC00239...    66   4e-10
DQ213906_1(DQ213906|pid:none) Taeniopygia guttata clone 0061P001...    65   7e-10
(Q9CQB7) RecName: Full=LYR motif-containing protein 1;  &AK00913...    65   1e-09
BC166909_1(BC166909|pid:none) Rattus norvegicus LYR motif contai...    64   2e-09
(A9UMQ3) RecName: Full=LYR motif-containing protein 1;  &BC15774...    57   2e-07
CP001330_134(CP001330|pid:none) Micromonas sp. RCC299 chromosome...    55   6e-07
BT080521_1(BT080521|pid:none) Caligus clemensi clone ccle-evs-51...    53   4e-06
AC103580_12(AC103580|pid:none) Trypanosoma brucei chromosome 4 c...    53   4e-06
BT046331_1(BT046331|pid:none) Salmo salar clone ssal-eve-513-329...    50   2e-05
BT076158_1(BT076158|pid:none) Caligus rogercresseyi clone crog-e...    50   3e-05
AM494957_319(AM494957|pid:none) Leishmania braziliensis chromoso...    50   3e-05
AM502252_313(AM502252|pid:none) Leishmania infantum chromosome 34.     49   4e-05
EF146333_1(EF146333|pid:none) Populus trichocarpa clone WS0117_E...    39   0.057
(B2GV91) RecName: Full=LYR motif-containing protein 2;  &BC16657...    38   0.097
(Q8R033) RecName: Full=LYR motif-containing protein 2;  &AK04479...    38   0.097
BX842622_10(BX842622|pid:none) Neurospora crassa DNA linkage gro...    37   0.22
(Q6Q560) RecName: Full=Protein ISD11; AltName: Full=Iron-sulfur ...    37   0.22
(Q32LM5) RecName: Full=LYR motif-containing protein 2;  &BC10951...    35   0.63
(Q5RES3) RecName: Full=LYR motif-containing protein 2;  &CR85744...    35   0.82
AY800381_1(AY800381|pid:none) Gossypium hirsutum chloroplast pro...    35   0.82
FJ563773_1(FJ563773|pid:none) Notylia albida voucher Whitten 282...    35   0.82
BT073532_1(BT073532|pid:none) Oncorhynchus mykiss clone omyk-evn...    34   1.4
CR382125_191(CR382125|pid:none) Kluyveromyces lactis strain NRRL...    34   1.4
CP000084_545(CP000084|pid:none) Candidatus Pelagibacter ubique H...    34   1.8
(P26257) RecName: Full=Beta-galactosidase;          Short=Lactas...    34   1.8
CR382139_205(CR382139|pid:none) Debaryomyces hansenii strain CBS...    33   2.4
CT005253_138(CT005253|pid:none) Leishmania major strain Friedlin...    33   3.1
AK062705_1(AK062705|pid:none) Oryza sativa Japonica Group cDNA c...    33   3.1
(A0ZZ93) RecName: Full=Putative membrane protein ycf1;  &AP00912...    33   3.1
BT082307_1(BT082307|pid:none) Anoplopoma fimbria clone afim-evh-...    32   5.3
AM910996_459(AM910996|pid:none) Plasmodium knowlesi strain H chr...    32   6.9
AE1659(AE1659) probable AraC-type regulators homolog lin1814 [im...    32   6.9
CP000903_556(CP000903|pid:none) Bacillus weihenstephanensis KBAB...    32   6.9
CU928165_150(CU928165|pid:none) Kluyveromyces thermotolerans str...    32   6.9
(Q54FN9) RecName: Full=LYR motif-containing protein 4;                 32   6.9
CR954203_198(CR954203|pid:none) Ostreococcus tauri strain OTTH05...    32   6.9
CP000853_238(CP000853|pid:none) Alkaliphilus oremlandii OhILAs, ...    32   9.1
FJ563415_1(FJ563415|pid:none) Rodriguezia arevaloi voucher Willi...    32   9.1
CP000962_1267(CP000962|pid:none) Clostridium botulinum A3 str. L...    32   9.1
(P35418) RecName: Full=Paramyosin; AltName: Full=Antigen B;     ...    32   9.1
Z46608_1(Z46608|pid:none) Drosophila melanogaster bcn92 gene.          32   9.1
(O46098) RecName: Full=Protein bcn92;  &AE014298_354(AE014298|pi...    32   9.1
FJ563244_1(FJ563244|pid:none) Notylia sp. Trujillo 427 voucher T...    32   9.1
L13723_1(L13723|pid:none) Taenia solium paramyosin (AgB) gene, c...    32   9.1
AY686637_1(AY686637|pid:none) Taenia solium paramyosin mRNA, com...    32   9.1
AE016825_1886(AE016825|pid:none) Chromobacterium violaceum ATCC ...    32   9.1
(Q8T305) RecName: Full=Paramyosin;  &AJ439882_1(AJ439882|pid:none)     32   9.1
FJ563162_1(FJ563162|pid:none) Rodriguezia lanceolata voucher Cha...    32   9.1

>AX884968_1(AX884968|pid:none) Sequence 831 from Patent EP1033401.
          Length = 102

 Score = 66.2 bits (160), Expect = 3e-10
 Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 8/76 (10%)
 Frame = +3

Query: 63  RNKALYMYRSILRLANKWESDS-QRED-------IRYETRSTFQKNKDLTDTEIINDKIE 218
           R + L +YRSI RLA KW++ S Q ED       I  E R+ F+KNK+LTDT++I   I+
Sbjct: 6   RQEVLGLYRSIFRLARKWQATSGQMEDTIKEKQYILNEARTLFRKNKNLTDTDLIKQCID 65

Query: 219 EARSRMLTALHYNIPY 266
           E  +R+   LHY IPY
Sbjct: 66  ECTARIXIGLHYKIPY 81

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 514,811,413
Number of extensions: 8471139
Number of successful extensions: 20349
Number of sequences better than 10.0: 49
Number of HSP's gapped: 20323
Number of HSP's successfully gapped: 49
Length of query: 135
Length of database: 1,040,966,779
Length adjustment: 99
Effective length of query: 36
Effective length of database: 723,742,564
Effective search space: 26054732304
Effective search space used: 26054732304
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)
PSORT 

 psg: 0.77  gvh: 0.41  alm: 0.57  top: 0.53  tms: 0.00  mit: 0.38  mip: 0.07
 nuc: 0.04  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 52.0 %: mitochondrial
	 24.0 %: nuclear
	 16.0 %: cytoplasmic
	  4.0 %: cytoskeletal
	  4.0 %: peroxisomal

>> prediction for Contig-U06595-1 is mit
VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0