Contig-U06555-1
Contig ID Contig-U06555-1
Contig update 2002. 9.13
Contig sequence
>Contig-U06555-1 (Contig-U06555-1Q) /CSM_Contig/Contig-U06555-1Q.Seq.d
CAAAATATAAAAACAGATACAATAAAAAAAAAATATATAAAGAAATAATG
ACTTGGCAAGCATATATTGATACTAATCTTATTGGTTCAGGATTTATTTC
AGCACAAATTCTTAGTTCAGCAGATGGATCCTCATGGGCAAATTCAAATG
GATTTTCAGTTAGCGCCACTGAAGCCCAACATATCCTTTCTTGTTTTAAA
GATTCAAATAAAGCTTCAGCAATGGGTATCACTATCAATAATGTTAAAAA
CTTTGTATTAAAAGCTGACGATAAATCCATATACGCAAAGAAAGATGCTG
GTGGTGTAGTTTTAGTAAAAACAAATCAAACCATTTTAGTTGCAGTTTAT
AATAGTAATCTTCAACCAGGTGCTGCTGCTAATGCTTGTGAAGCCCTTGG
TGATTATTTAAGAGAACAAGGTTTCTAAAATAAAAAAAAA

Gap no gap
Contig length 440
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 43550
End point 43990
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 4
Link to clone list U06555
List of clone(s)

est1=VSD495F,1,441
est2=VSD495Z,1,421
est3=VSD638Z,15,420
est4=VSD638F,17,441
Translated Amino Acid sequence
KYKNRYNKKKIYKEIMTWQAYIDTNLIGSGFISAQILSSADGSSWANSNGFSVSATEAQH
ILSCFKDSNKASAMGITINNVKNFVLKADDKSIYAKKDAGGVVLVKTNQTILVAVYNSNL
QPGAAANACEALGDYLREQGF*nkkk


Translated Amino Acid sequence (All Frames)
Frame A:
qniktdtikkkyikk**lgkhililillvqdlfqhkflvqqmdphgqiqmdfqlaplkpn
isflvlkiqiklqqwvslsimlktly*kltinpytqrkmlvv*f**kqikpf*lqfiivi
fnqvlllmlvkplvii*enkvskikk


Frame B:
ki*kqiq*kkni*rnndlasiy*y*sywfriyfstns*fsrwilmgkfkwifs*rh*spt
ypflf*rfk*sfsngyhyq*c*klciks*r*ihirkercwwcsfsknksnhfscsl***s
strccc*cl*spw*lfkrtrflk*kk


Frame C:
KYKNRYNKKKIYKEIMTWQAYIDTNLIGSGFISAQILSSADGSSWANSNGFSVSATEAQH
ILSCFKDSNKASAMGITINNVKNFVLKADDKSIYAKKDAGGVVLVKTNQTILVAVYNSNL
QPGAAANACEALGDYLREQGF*nkkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U06555-1 (Contig-U06555-1Q)
/CSM_Contig/Contig-U06555-1Q.Seq.d
(440 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U06555-1 (Contig-U06555-1Q) /CSM_Contig/Conti... 795 0.0
Contig-U11472-1 (Contig-U11472-1Q) /CSM_Contig/Conti... 36 0.030
Contig-U07116-1 (Contig-U07116-1Q) /CSM_Contig/Conti... 36 0.030
Contig-U04697-1 (Contig-U04697-1Q) /CSM_Contig/Conti... 36 0.030
Contig-U10837-1 (Contig-U10837-1Q) /CSM_Contig/Conti... 34 0.12
Contig-U14730-1 (Contig-U14730-1Q) /CSM_Contig/Conti... 32 0.47
Contig-U13930-1 (Contig-U13930-1Q) /CSM_Contig/Conti... 32 0.47
Contig-U13731-1 (Contig-U13731-1Q) /CSM_Contig/Conti... 32 0.47
Contig-U12393-1 (Contig-U12393-1Q) /CSM_Contig/Conti... 32 0.47
Contig-U11667-1 (Contig-U11667-1Q) /CSM_Contig/Conti... 32 0.47

>Contig-U06555-1 (Contig-U06555-1Q) /CSM_Contig/Contig-U06555-1Q.Seq.d
Length = 440

Score = 795 bits (401), Expect = 0.0
Identities = 421/431 (97%)
Strand = Plus / Plus


Query: 1 caaaatataaaaacagatacaatnnnnnnnnnntatataaagaaataatgacttggcaag 60
||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 caaaatataaaaacagatacaataaaaaaaaaatatataaagaaataatgacttggcaag 60


Query: 61 catatattgatactaatcttattggttcaggatttatttcagcacaaattcttagttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catatattgatactaatcttattggttcaggatttatttcagcacaaattcttagttcag 120


Query: 121 cagatggatcctcatgggcaaattcaaatggattttcagttagcgccactgaagcccaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagatggatcctcatgggcaaattcaaatggattttcagttagcgccactgaagcccaac 180


Query: 181 atatcctttcttgttttaaagattcaaataaagcttcagcaatgggtatcactatcaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atatcctttcttgttttaaagattcaaataaagcttcagcaatgggtatcactatcaata 240


Query: 241 atgttaaaaactttgtattaaaagctgacgataaatccatatacgcaaagaaagatgctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgttaaaaactttgtattaaaagctgacgataaatccatatacgcaaagaaagatgctg 300


Query: 301 gtggtgtagttttagtaaaaacaaatcaaaccattttagttgcagtttataatagtaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtggtgtagttttagtaaaaacaaatcaaaccattttagttgcagtttataatagtaatc 360


Query: 361 ttcaaccaggtgctgctgctaatgcttgtgaagcccttggtgattatttaagagaacaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcaaccaggtgctgctgctaatgcttgtgaagcccttggtgattatttaagagaacaag 420


Query: 421 gtttctaaaat 431
|||||||||||
Sbjct: 421 gtttctaaaat 431


>Contig-U11472-1 (Contig-U11472-1Q) /CSM_Contig/Contig-U11472-1Q.Seq.d
Length = 3643

Score = 36.2 bits (18), Expect = 0.030
Identities = 18/18 (100%)
Strand = Plus / Plus


Query: 142 attcaaatggattttcag 159
||||||||||||||||||
Sbjct: 122 attcaaatggattttcag 139


>Contig-U07116-1 (Contig-U07116-1Q) /CSM_Contig/Contig-U07116-1Q.Seq.d
Length = 264

Score = 36.2 bits (18), Expect = 0.030
Identities = 18/18 (100%)
Strand = Plus / Minus


Query: 203 ttcaaataaagcttcagc 220
||||||||||||||||||
Sbjct: 207 ttcaaataaagcttcagc 190


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5661
Number of Sequences: 6905
Number of extensions: 5661
Number of successful extensions: 537
Number of sequences better than 10.0: 168
length of query: 440
length of database: 5,674,871
effective HSP length: 16
effective length of query: 424
effective length of database: 5,564,391
effective search space: 2359301784
effective search space used: 2359301784
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2008.11. 9
Homology vs DNA
Query= Contig-U06555-1 (Contig-U06555-1Q) /CSM_Contig/Contig-U06555-1Q.Seq.d
(440 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU264132) Dictyostelium discoideum vegetative cDNA clone:VS... 789 0.0 2
(AU264347) Dictyostelium discoideum vegetative cDNA clone:VS... 789 0.0 1
(AU264133) Dictyostelium discoideum vegetative cDNA clone:VS... 724 0.0 3
(AJ430084) Dictyostelium discoideum p3 gene for profilin III. 755 0.0 1
(AU264348) Dictyostelium discoideum vegetative cDNA clone:VS... 700 0.0 2
(BJ426243) Dictyostelium discoideum cDNA clone:ddv58i07, 5' ... 40 5e-05 3
(AU266446) Dictyostelium discoideum vegetative cDNA clone:VS... 40 5e-05 3
(AU264080) Dictyostelium discoideum vegetative cDNA clone:VS... 40 5e-05 3
(BJ445067) Dictyostelium discoideum cDNA clone:ddv58i07, 3' ... 40 5e-05 3
(BJ441237) Dictyostelium discoideum cDNA clone:ddv46i03, 3' ... 40 5e-05 3
(AU266945) Dictyostelium discoideum vegetative cDNA clone:VS... 40 5e-05 3
(AU266445) Dictyostelium discoideum vegetative cDNA clone:VS... 40 5e-05 3
(BJ427954) Dictyostelium discoideum cDNA clone:ddv10o04, 3' ... 40 5e-05 3
(BJ433534) Dictyostelium discoideum cDNA clone:ddv22n01, 3' ... 40 5e-05 3
(X61580) D.discoideum mRNA for profilin II. 40 5e-05 3
(C90771) Dictyostelium discoideum slug cDNA, clone SSJ129. 40 5e-05 3
(BJ422498) Dictyostelium discoideum cDNA clone:ddv46i03, 5' ... 40 5e-05 3
(AU262666) Dictyostelium discoideum vegetative cDNA clone:VS... 40 5e-05 3
(AU266944) Dictyostelium discoideum vegetative cDNA clone:VS... 40 6e-05 3
(BJ409836) Dictyostelium discoideum cDNA clone:ddv10o04, 5' ... 40 6e-05 3
(AU264079) Dictyostelium discoideum vegetative cDNA clone:VS... 40 6e-05 3
(C90509) Dictyostelium discoideum slug cDNA, clone SSI648. 40 6e-05 3
(BJ415318) Dictyostelium discoideum cDNA clone:ddv22n01, 5' ... 40 6e-05 3
(BJ414340) Dictyostelium discoideum cDNA clone:ddv18h20, 5' ... 40 6e-05 3
(C93724) Dictyostelium discoideum slug cDNA, clone SSL648. 40 7e-05 3
(AU284469) Dictyostelium discoideum gamete cDNA clone:FC-AX2... 40 7e-05 3
(C90835) Dictyostelium discoideum slug cDNA, clone SSJ209. 40 0.003 3
(AU038025) Dictyostelium discoideum slug cDNA, clone SSH172. 40 0.003 3
(AL365362) Human DNA sequence from clone RP5-1017O19 on chro... 36 0.12 4
(CU467531) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 0.42 4
(AP005246) Oryza sativa Japonica Group genomic DNA, chromoso... 38 1.4 3
(AU263755) Dictyostelium discoideum vegetative cDNA clone:VS... 40 1.6 2
(AU263754) Dictyostelium discoideum vegetative cDNA clone:VS... 40 1.7 2
(BX511102) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 34 2.0 2
(CT027710) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 34 2.0 2
(BX469913) Zebrafish DNA sequence from clone DKEY-237G5 in l... 34 2.1 2
(CR847575) Zebrafish DNA sequence from clone CH211-282M9 in ... 42 2.1 2
(AU284457) Dictyostelium discoideum gamete cDNA clone:FC-AX0... 40 2.9 2
(AU263284) Dictyostelium discoideum vegetative cDNA clone:VS... 40 3.1 2
(AU284845) Dictyostelium discoideum gamete cDNA clone:FC-BN0... 40 3.4 2
(AU284346) Dictyostelium discoideum gamete cDNA clone:FC-AN1... 40 3.6 2
(AC094687) Rattus norvegicus clone CH230-5E14, *** SEQUENCIN... 44 4.1 1
(FH050478) CHO_OF3321xm14r1.ab1 CHO_OF3 Nicotiana tabacum ge... 44 4.1 1
(ET691838) CHO_OF330xf15f1.ab1 CHO_OF Nicotiana tabacum geno... 44 4.1 1
(DU871969) 108532 Tomato HindIII BAC Library Solanum lycoper... 44 4.1 1
(DU846429) 38663 Tomato HindIII BAC Library Solanum lycopers... 44 4.1 1
(DU675500) Bst008042 lambda03 Boechera stricta genomic clone... 44 4.1 1
(EC607749) Y33B11 YLX600 Hevea brasiliensis cDNA clone Y33B1... 44 4.1 1
(BB260415) Mus musculus 7 days neonate cerebellum cDNA, RIKE... 44 4.1 1
(EX914892) HTAB-aae19e09.b1 Heterorhabditis_bacteriophora_HT... 44 4.1 1
(EH680169) CCIL5064.b1_O17.ab1 CCI(LMS) chicory Cichorium in... 36 4.2 2
(FH027819) CHO_OF3152xn08f1.ab1 CHO_OF3 Nicotiana tabacum ge... 40 5.4 2
(AC164948) Loxodonta africana clone VMRC15-60O24, WORKING DR... 38 5.4 3
(AP004303) Oryza sativa Japonica Group genomic DNA, chromoso... 38 5.4 4
(CR954246) Pseudoalteromonas haloplanktis str. TAC125 chromo... 30 6.1 2
(EK156432) 1095458007036 Global-Ocean-Sampling_GS-31-01-01-1... 34 6.1 2
(AC147639) Mus musculus BAC clone RP23-115M6 from 13, comple... 40 7.1 4
(BX649330) Zebrafish DNA sequence from clone CH211-140F21 in... 40 8.3 6
(BX649363) Zebrafish DNA sequence from clone CH211-13C3 in l... 38 8.6 3
(CU855502) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 9.1 4
(DX525716) GH_MBb0045G17r GH_MBb Gossypium hirsutum genomic ... 36 9.2 2
(DQ366035) Clostridium perfringens strain CW92 plasmid pCW3,... 40 9.2 3
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 40 9.3 13
(CU915595) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 9.4 4
(CT027818) Zebrafish DNA sequence from clone CH211-183L21 in... 42 9.8 2

>(AU264132) Dictyostelium discoideum vegetative cDNA clone:VSD495,
5' end single read.
Length = 441

Score = 789 bits (398), Expect(2) = 0.0
Identities = 398/398 (100%)
Strand = Plus / Plus


Query: 34 tatataaagaaataatgacttggcaagcatatattgatactaatcttattggttcaggat 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34 tatataaagaaataatgacttggcaagcatatattgatactaatcttattggttcaggat 93


Query: 94 ttatttcagcacaaattcttagttcagcagatggatcctcatgggcaaattcaaatggat 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 ttatttcagcacaaattcttagttcagcagatggatcctcatgggcaaattcaaatggat 153


Query: 154 tttcagttagcgccactgaagcccaacatatcctttcttgttttaaagattcaaataaag 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tttcagttagcgccactgaagcccaacatatcctttcttgttttaaagattcaaataaag 213


Query: 214 cttcagcaatgggtatcactatcaataatgttaaaaactttgtattaaaagctgacgata 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 cttcagcaatgggtatcactatcaataatgttaaaaactttgtattaaaagctgacgata 273


Query: 274 aatccatatacgcaaagaaagatgctggtggtgtagttttagtaaaaacaaatcaaacca 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 aatccatatacgcaaagaaagatgctggtggtgtagttttagtaaaaacaaatcaaacca 333


Query: 334 ttttagttgcagtttataatagtaatcttcaaccaggtgctgctgctaatgcttgtgaag 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ttttagttgcagtttataatagtaatcttcaaccaggtgctgctgctaatgcttgtgaag 393


Query: 394 cccttggtgattatttaagagaacaaggtttctaaaat 431
||||||||||||||||||||||||||||||||||||||
Sbjct: 394 cccttggtgattatttaagagaacaaggtttctaaaat 431

Score = 46.1 bits (23), Expect(2) = 0.0
Identities = 23/23 (100%)
Strand = Plus / Plus


Query: 1 caaaatataaaaacagatacaat 23
|||||||||||||||||||||||
Sbjct: 1 caaaatataaaaacagatacaat 23

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 556,917,378
Number of extensions: 34777962
Number of successful extensions: 2641717
Number of sequences better than 10.0: 65
Length of query: 440
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 417
Effective length of database: 93,106,754,628
Effective search space: 38825516679876
Effective search space used: 38825516679876
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 6.22
Homology vs Protein
Query= Contig-U06555-1 (Contig-U06555-1Q) /CSM_Contig/Contig-U06555-1Q.Seq.d
(440 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q8T8M2) RecName: Full=Profilin-3; AltName: Full=Profilin III; ... 250 9e-66
(P68696) RecName: Full=Profilin-1A; AltName: Full=Profilin IA; A... 126 3e-28
NRL(2PRF) Profilin ia (nmr, 19 structures) - Acanthamoeba sp. 124 1e-27
(P26200) RecName: Full=Profilin-2; AltName: Full=Profilin II; &... 122 3e-27
(Q95VF7) RecName: Full=Profilin-1B; AltName: Full=Profilin IB; A... 122 4e-27
C48405(C48405)profilin-IB - Acanthamoeba sp. (tentative sequence) 120 1e-26
NRL(1ACF) Profilin i - Acanthamoeba castellanii 119 3e-26
S13199(S13199)profilin - slime mold (Physarum polycephalum) 105 5e-22
CR382128_274(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 105 6e-22
(P53696) RecName: Full=Profilin; &L37834_1(L37834|pid:none) 99 6e-20
FM992688_740(FM992688|pid:none) Candida dubliniensis CD36 chromo... 97 2e-19
(P39825) RecName: Full=Profilin; &A53952(A53952;T38785) &CU3296... 92 4e-18
CU928170_663(CU928170|pid:none) Kluyveromyces thermotolerans str... 92 6e-18
AM270320_28(AM270320|pid:none) Aspergillus niger contig An14c013... 92 7e-18
DQ907943_1(DQ907943|pid:none) Litopenaeus vannamei chicadae/prof... 90 2e-17
CR382125_94(CR382125|pid:none) Kluyveromyces lactis strain NRRL ... 90 3e-17
(P25843) RecName: Full=Profilin; AltName: Full=Protein chickadee... 89 6e-17
CU928178_428(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 89 6e-17
BT078353_1(BT078353|pid:none) Lepeophtheirus salmonis clone lsal... 89 6e-17
BT076405_1(BT076405|pid:none) Caligus rogercresseyi clone crog-e... 88 8e-17
EF083566_1(EF083566|pid:none) Picea sitchensis clone WS02726_G13... 87 1e-16
(Q68HB4) RecName: Full=Profilin; &AY690617_1(AY690617|pid:none)... 85 7e-16
EU682393_1(EU682393|pid:none) Brugia malayi profilin (Prof) mRNA... 85 9e-16
AM920435_405(AM920435|pid:none) Penicillium chrysogenum Wisconsi... 83 3e-15
AY635995_1(AY635995|pid:none) Monacrosporium haptotylum profilin... 81 1e-14
(Q21193) RecName: Full=Profilin-3; &AY530910_1(AY530910|pid:non... 81 1e-14
(Q9STB6) RecName: Full=Profilin-2; AltName: Full=Pollen allergen... 80 2e-14
AM502250_103(AM502250|pid:none) Leishmania infantum chromosome 32. 79 4e-14
AJ417566_1(AJ417566|pid:none) Phoenix dactylifera mRNA for profi... 79 5e-14
EU284912_1(EU284912|pid:none) TSA: Elaeis guineensis EgEfMPOB000... 79 6e-14
EU961094_1(EU961094|pid:none) Zea mays clone 232744 profilin-2 m... 78 1e-13
AF126263_1(AF126263|pid:none) Phalaenopsis sp. 'KCbutterfly' put... 77 2e-13
(Q5EF31) RecName: Full=Profilin; AltName: Full=Pollen allergen C... 77 2e-13
(O65812) RecName: Full=Profilin-1; AltName: Full=Pollen allergen... 77 2e-13
(Q9SNW6) RecName: Full=Profilin-2; &AF200185_1(AF200185|pid:none) 77 2e-13
(O22655) RecName: Full=Profilin-4; AltName: Full=ZmPRO4; &AF032... 77 2e-13
(Q9M7M8) RecName: Full=Profilin-5; AltName: Full=Pollen allergen... 77 2e-13
EU142845_1(EU142845|pid:none) Gerbera hybrid cultivar putative a... 77 2e-13
AY102169_1(AY102169|pid:none) Ceratopteris richardii profilin 1 ... 77 2e-13
DQ663545_1(DQ663545|pid:none) Corylus avellana pollen profilin v... 76 3e-13
EU183298_1(EU183298|pid:none) Amaranthus viridis Ama v 1.01 alle... 76 4e-13
AE017341_556(AE017341|pid:none) Cryptococcus neoformans var. neo... 76 4e-13
(Q64LH2) RecName: Full=Profilin-2; AltName: Full=Pollen allergen... 75 5e-13
DQ472192_1(DQ472192|pid:none) Trypanosoma cruzi strain CL Brener... 75 5e-13
DQ663564_1(DQ663564|pid:none) Zea mays pollen profilin variant 6... 75 5e-13
AJ865015_1(AJ865015|pid:none) Citrus sinensis mRNA for profilin ... 75 5e-13
(Q9M7M9) RecName: Full=Profilin-4; AltName: Full=Pollen allergen... 75 5e-13
AY291344_1(AY291344|pid:none) Elaeis guineensis oil palm profili... 75 7e-13
AM283511_1(AM283511|pid:none) Malus x domestica mal d 4.0302 gen... 75 7e-13
(O82572) RecName: Full=Profilin-1; &AF092547_1(AF092547|pid:none) 75 7e-13
AJ491881_1(AJ491881|pid:none) Prunus persica mRNA for profilin, ... 75 9e-13
DQ335252_1(DQ335252|pid:none) Cinnamomum camphora profilin-like ... 75 9e-13
(Q9XG85) RecName: Full=Profilin-1; AltName: Full=Pollen allergen... 75 9e-13
AY291343_1(AY291343|pid:none) Elaeis guineensis oil palm profili... 74 1e-12
AJ565931_1(AJ565931|pid:none) Cucumis melo mRNA for profilin (cu... 74 1e-12
(Q9XF42) RecName: Full=Profilin-3; AltName: Full=GD4-5; AltName:... 74 2e-12
DQ228336_1(DQ228336|pid:none) Solanum tuberosum clone 145G03 pro... 74 2e-12
DQ663561_1(DQ663561|pid:none) Zea mays pollen profilin variant 3... 74 2e-12
AY900016_1(AY900016|pid:none) Petroselinum crispum profilin 5 (P... 74 2e-12
DQ207877_1(DQ207877|pid:none) Solanum tuberosum clone 092D10 pro... 74 2e-12
EU183299_1(EU183299|pid:none) Amaranthus viridis Ama v 1.02 alle... 74 2e-12
AY726606_1(AY726606|pid:none) Arachis hypogaea profilin (PROF) m... 74 2e-12
(Q64LH0) RecName: Full=Profilin-3; AltName: Full=Pollen allergen... 73 3e-12
DQ663560_1(DQ663560|pid:none) Zea mays pollen profilin variant 2... 73 3e-12
DQ663562_1(DQ663562|pid:none) Zea mays pollen profilin variant 4... 73 3e-12
FJ985985_1(FJ985985|pid:none) Chenopodium album, Che a 2 pollen ... 73 3e-12
(Q9LEI8) RecName: Full=Profilin-6; AltName: Full=Pollen allergen... 73 3e-12
(P49231) RecName: Full=Profilin-1; &S49351(S49351) &X81982_1(X8... 73 3e-12
(O81982) RecName: Full=Profilin; AltName: Full=Pollen allergen H... 73 3e-12
(Q64LH1) RecName: Full=Profilin-1; AltName: Full=Pollen allergen... 73 3e-12
AM283512_1(AM283512|pid:none) Malus x domestica mal d 4.0302 gen... 73 3e-12
AY792606_1(AY792606|pid:none) Malus x domestica clone M4.01PM7 p... 73 3e-12
(P35081) RecName: Full=Profilin-1; AltName: Full=ZmPRO1; &S3579... 73 3e-12
(Q8GSL5) RecName: Full=Profilin; AltName: Allergen=Pru du 4; &A... 73 3e-12
DQ663542_1(DQ663542|pid:none) Phleum pratense pollen profilin va... 73 3e-12
DQ663554_1(DQ663554|pid:none) Olea europaea clone 6 pollen profi... 72 5e-12
DQ663543_1(DQ663543|pid:none) Corylus avellana pollen profilin v... 72 5e-12
DQ640909_1(DQ640909|pid:none) Olea europaea cultivar Bella de Es... 72 6e-12
DQ663535_1(DQ663535|pid:none) Phleum pratense pollen profilin va... 72 6e-12
(O04725) RecName: Full=Profilin; AltName: Full=Pollen allergen C... 72 6e-12
AC149269_8(AC149269|pid:none) Medicago truncatula clone mth2-102... 72 6e-12
(P35079) RecName: Full=Profilin-1; AltName: Full=Pollen allergen... 72 6e-12
AJ507457_1(AJ507457|pid:none) Malus x domestica mRNA for apple a... 72 6e-12
(Q9XF38) RecName: Full=Profilin; AltName: Full=Allergen Pyr c 3;... 72 6e-12
DQ663548_1(DQ663548|pid:none) Corylus avellana pollen profilin v... 72 6e-12
AY792612_1(AY792612|pid:none) Malus x domestica clone M4-2-PM2 p... 72 6e-12
(Q9XF40) RecName: Full=Profilin-1; AltName: Full=GD4-1; AltName:... 72 8e-12
DQ663557_1(DQ663557|pid:none) Olea europaea clone 9 pollen profi... 72 8e-12
(Q9SNW7) RecName: Full=Profilin-1; &AF200184_1(AF200184|pid:none) 72 8e-12
(P35083) RecName: Full=Profilin-3; AltName: Full=ZmPRO3; &EU960... 71 1e-11
DQ309464_1(DQ309464|pid:none) Litchi chinensis profilin mRNA, co... 71 1e-11
BT034878_1(BT034878|pid:none) Zea mays full-length cDNA clone ZM... 71 1e-11
DQ663540_1(DQ663540|pid:none) Phleum pratense pollen profilin va... 71 1e-11
AY792608_1(AY792608|pid:none) Malus x domestica clone M4.01PM9 p... 71 1e-11
AY268422_1(AY268422|pid:none) Humulus scandens profilin-like pro... 71 1e-11
(Q93YG7) RecName: Full=Profilin-2; AltName: Full=Minor food alle... 71 1e-11
(Q5FX67) RecName: Full=Profilin; AltName: Full=Pollen allergen C... 71 1e-11
AY189970_1(AY189970|pid:none) Gossypium hirsutum profilin mRNA, ... 71 1e-11
AJ507458_1(AJ507458|pid:none) Malus x domestica mRNA for apple a... 71 1e-11
(P0C0Y3) RecName: Full=Profilin; AltName: Allergen=Fra a 4; 71 1e-11
(Q9XF37) RecName: Full=Profilin; AltName: Full=Minor pollen alle... 71 1e-11
AF327623_1(AF327623|pid:none) Corylus avellana clone 7 minor all... 71 1e-11
EF145591_1(EF145591|pid:none) Populus trichocarpa clone WS01126_... 71 1e-11
FJ899746_1(FJ899746|pid:none) Amaranthus retroflexus Ama r 2 pol... 70 2e-11
DQ650633_1(DQ650633|pid:none) Betula pendula pollen profilin mRN... 70 2e-11
(Q41344) RecName: Full=Profilin-1; &T07856(T07856) &U50195_1(U5... 70 2e-11
DQ663538_1(DQ663538|pid:none) Phleum pratense pollen profilin va... 70 2e-11
(Q9XF41) RecName: Full=Profilin-2; AltName: Full=GD4-2; AltName:... 70 2e-11
AY900012_1(AY900012|pid:none) Petroselinum crispum profilin 1 (P... 70 2e-11
AM463779_2(AM463779|pid:none) Vitis vinifera contig VV78X215842.... 70 2e-11
AY292387_1(AY292387|pid:none) Cucumis melo var. reticulatus cult... 70 2e-11
(Q38904) RecName: Full=Profilin-3; &AL161574_40(AL161574|pid:no... 70 2e-11
(Q8H2C9) RecName: Full=Profilin-1; AltName: Full=Pollen allergen... 70 2e-11
BT000885_1(BT000885|pid:none) Arabidopsis thaliana clone C105361... 70 2e-11
BT071677_1(BT071677|pid:none) Picea sitchensis clone WS0297_G11 ... 70 2e-11
AM433818_4(AM433818|pid:none) Vitis vinifera contig VV78X053358.... 70 3e-11
DQ663537_1(DQ663537|pid:none) Phleum pratense pollen profilin va... 70 3e-11
DQ138336_1(DQ138336|pid:none) Olea europaea cultivar Blanqueta c... 70 3e-11
(Q941H7) RecName: Full=Profilin; AltName: Full=Minor allergen Li... 70 3e-11
DQ640906_1(DQ640906|pid:none) Olea europaea cultivar Lechin de G... 70 3e-11
(O65810) RecName: Full=Profilin-2; AltName: Full=GmPRO2; AltName... 70 3e-11
AY900015_1(AY900015|pid:none) Petroselinum crispum profilin 4 (P... 70 3e-11
EU106621_1(EU106621|pid:none) Glycine max profilin mRNA, complet... 70 3e-11
AY900014_1(AY900014|pid:none) Petroselinum crispum profilin 3 (P... 70 3e-11
(Q9FUD1) RecName: Full=Profilin-A; &AC074354_11(AC074354|pid:no... 70 3e-11
DQ640905_1(DQ640905|pid:none) Olea europaea cultivar Sourani clo... 70 3e-11
DQ317573_1(DQ317573|pid:none) Olea europaea cultivar Morrut clon... 70 3e-11
AM432036_1(AM432036|pid:none) Vitis vinifera contig VV78X100474.... 69 4e-11
DQ640904_1(DQ640904|pid:none) Olea europaea cultivar Picual clon... 69 4e-11
(P83647) RecName: Full=Profilin LP04; &(Q5VMJ3) RecName: Fu &AK... 69 4e-11
DQ663547_1(DQ663547|pid:none) Corylus avellana pollen profilin v... 69 5e-11
DQ663555_1(DQ663555|pid:none) Olea europaea clone 7 pollen profi... 69 5e-11
AY894661_1(AY894661|pid:none) Ambrosia artemisiifolia profilin i... 69 5e-11
DQ138345_1(DQ138345|pid:none) Olea europaea cultivar Leccino clo... 69 5e-11
(O24171) RecName: Full=Profilin-3; AltName: Full=Pollen allergen... 69 5e-11
AF327622_1(AF327622|pid:none) Corylus avellana clone 6 minor all... 69 5e-11
EF147980_1(EF147980|pid:none) Populus trichocarpa clone WS0126_G... 69 5e-11
DQ317580_1(DQ317580|pid:none) Olea europaea cultivar Picual clon... 69 5e-11
(O65809) RecName: Full=Profilin-1; AltName: Full=GmPRO1; AltName... 69 5e-11
DQ138334_1(DQ138334|pid:none) Olea europaea cultivar Cornicabra ... 69 7e-11
BT070531_1(BT070531|pid:none) Picea sitchensis clone WS02734_H08... 69 7e-11
EU163274_1(EU163274|pid:none) Raphanus sativus cultivar Yuanbai ... 69 7e-11
DQ138364_1(DQ138364|pid:none) Olea europaea cultivar Lucio clone... 69 7e-11
BT003946_1(BT003946|pid:none) Arabidopsis thaliana clone RAFL15-... 69 7e-11
EU106622_1(EU106622|pid:none) Olea europaea profilin mRNA, compl... 69 7e-11
DQ138348_1(DQ138348|pid:none) Olea europaea cultivar Sevillenca ... 69 7e-11
DQ317567_1(DQ317567|pid:none) Olea europaea cultivar Farga clone... 69 7e-11
DQ138353_1(DQ138353|pid:none) Olea europaea cultivar Villalonga ... 69 7e-11
DQ317578_1(DQ317578|pid:none) Olea europaea cultivar Sourani clo... 69 7e-11
AY894660_1(AY894660|pid:none) Ambrosia artemisiifolia profilin i... 69 7e-11
DQ117909_1(DQ117909|pid:none) Olea europaea cultivar Picudo clon... 69 7e-11
DQ061978_1(DQ061978|pid:none) Olea europaea cultivar Lechin de S... 68 9e-11
DQ138335_1(DQ138335|pid:none) Olea europaea cultivar Blanqueta c... 68 9e-11
DQ138326_1(DQ138326|pid:none) Olea europaea cultivar Manzanilla ... 68 9e-11
(P41372) RecName: Full=Profilin-1; &X82120_1(X82120|pid:none) 68 9e-11
DQ317569_1(DQ317569|pid:none) Olea europaea cultivar Frantoio cl... 68 9e-11
(Q9FUB8) RecName: Full=Profilin; &AF315326_1(AF315326|pid:none) 68 9e-11
DQ117905_1(DQ117905|pid:none) Olea europaea cultivar Verdial de ... 68 9e-11
(Q8SAE6) RecName: Full=Profilin; AltName: Full=Minor pollen alle... 68 1e-10
(O24169) RecName: Full=Profilin-1; AltName: Full=Pollen allergen... 68 1e-10
DQ663558_1(DQ663558|pid:none) Olea europaea clone 10 pollen prof... 68 1e-10
EU163278_1(EU163278|pid:none) Brassica rapa subsp. pekinensis cu... 67 1e-10
DQ117902_1(DQ117902|pid:none) Olea europaea cultivar Verdial de ... 67 1e-10
DQ138363_1(DQ138363|pid:none) Olea europaea cultivar Lucio clone... 67 1e-10
DQ138357_1(DQ138357|pid:none) Olea europaea cultivar Acebuche cl... 67 1e-10
(Q2NKT1) RecName: Full=Profilin-4; &BC111657_1(BC111657|pid:none) 67 1e-10
(O24282) RecName: Full=Profilin-3; AltName: Full=Pollen allergen... 67 2e-10
EU163275_1(EU163275|pid:none) Brassica oleracea var. capitata cu... 67 2e-10
DQ138360_1(DQ138360|pid:none) Olea europaea cultivar Verdial de ... 67 2e-10
EF541377_1(EF541377|pid:none) Olea europaea cultivar Rowghani cl... 67 2e-10
DQ138327_1(DQ138327|pid:none) Olea europaea cultivar Arbequina c... 67 2e-10
DQ061977_1(DQ061977|pid:none) Olea europaea cultivar Lechin de S... 67 2e-10
DQ138338_1(DQ138338|pid:none) Olea europaea cultivar Blanqueta c... 67 2e-10
DQ117904_1(DQ117904|pid:none) Olea europaea cultivar Verdial de ... 67 2e-10
(Q9D6I3) RecName: Full=Profilin-4; AltName: Full=Profilin IV; &... 66 3e-10
DQ317575_1(DQ317575|pid:none) Olea europaea cultivar Morrut clon... 66 3e-10
(P52184) RecName: Full=Profilin-1; &T04415(T04415) &U49505_1(U4... 66 3e-10
DQ138352_1(DQ138352|pid:none) Olea europaea cultivar Villalonga ... 66 3e-10
AY682392_1(AY682392|pid:none) Rattus norvegicus profilin IV mRNA... 65 9e-10
DQ138361_1(DQ138361|pid:none) Olea europaea cultivar Verdial de ... 65 9e-10
DQ138332_1(DQ138332|pid:none) Olea europaea cultivar Cornicabra ... 64 1e-09
EU106623_1(EU106623|pid:none) Penaeus monodon profilin mRNA, com... 64 2e-09
DQ317579_1(DQ317579|pid:none) Olea europaea cultivar Sourani clo... 64 2e-09
(Q20025) RecName: Full=Profilin-2; &AY530909_1(AY530909|pid:non... 64 2e-09
DQ138358_1(DQ138358|pid:none) Olea europaea cultivar Verdial de ... 64 2e-09
(Q42418) RecName: Full=Profilin-2; &AK319124_1(AK319124|pid:non... 63 3e-09
AY086576_1(AY086576|pid:none) Arabidopsis thaliana clone 25886 m... 61 1e-08
AY803196_1(AY803196|pid:none) Suidasia medanensis profilin mRNA,... 61 1e-08
AF335423_1(AF335423|pid:none) Chlamydomonas reinhardtii profilin... 61 1e-08
T16253(T16253)hypothetical protein F35C8.6 - Caenorhabditis eleg... 60 2e-08
AF049936_1(AF049936|pid:none) Petunia x hybrida PGPS/NH20 (PGPS/... 60 3e-08
AY291334_1(AY291334|pid:none) Blomia tropicalis Blo t profilin a... 57 2e-07
(P49230) RecName: Full=Profilin; &S63533(S63533;S63474) &X90911... 56 4e-07
(Q6QNF8) RecName: Full=Profilin; &AY532620_1(AY532620|pid:none) 51 1e-05
CR954208_215(CR954208|pid:none) Ostreococcus tauri strain OTTH05... 50 2e-05
AF174306_1(AF174306|pid:none) Tetrahymena thermophila profilin m... 49 4e-05
CP000588_207(CP000588|pid:none) Ostreococcus lucimarinus CCE9901... 49 4e-05
DQ517333_1(DQ517333|pid:none) Nicotiana benthamiana leaf profili... 49 7e-05
AY499654_1(AY499654|pid:none) Capsicum annuum profilin mRNA, par... 48 9e-05
CU638743_316(CU638743|pid:none) Podospora anserina genomic DNA c... 46 5e-04
AK318954_1(AK318954|pid:none) Arabidopsis thaliana AT5G56600 mRN... 41 0.015
EU965055_1(EU965055|pid:none) Zea mays clone 283480 histone H4 m... 40 0.025
BC045843_1(BC045843|pid:none) Danio rerio profilin 2 like, mRNA ... 33 3.1
BX842648_210(BX842648|pid:none) Bdellovibrio bacteriovorus compl... 33 3.1
CP000076_161(CP000076|pid:none) Pseudomonas fluorescens Pf-5, co... 33 3.1
CU104710_8(CU104710|pid:none) Zebrafish DNA sequence from clone ... 33 3.1
CP000976_278(CP000976|pid:none) Borrelia duttonii Ly, complete g... 32 5.2
CP001146_1592(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 32 5.2
CP000721_2532(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 32 6.8
CP000937_1261(CP000937|pid:none) Francisella philomiragia subsp.... 32 8.9
CP000802_360(CP000802|pid:none) Escherichia coli HS, complete ge... 32 8.9
AY600955_2(AY600955|pid:none) Drosophila melanogaster transposon... 32 8.9
CP000494_6707(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 32 8.9

>(Q8T8M2) RecName: Full=Profilin-3; AltName: Full=Profilin III;
&AJ430084_1(AJ430084|pid:none)
Length = 126

Score = 250 bits (639), Expect = 9e-66
Identities = 126/126 (100%), Positives = 126/126 (100%)
Frame = +3

Query: 48 MTWQAYIDTNLIGSGFISAQILSSADGSSWANSNGFSVSATEAQHILSCFKDSNKASAMG 227
MTWQAYIDTNLIGSGFISAQILSSADGSSWANSNGFSVSATEAQHILSCFKDSNKASAMG
Sbjct: 1 MTWQAYIDTNLIGSGFISAQILSSADGSSWANSNGFSVSATEAQHILSCFKDSNKASAMG 60

Query: 228 ITINNVKNFVLKADDKSIYAKKDAGGVVLVKTNQTILVAVYNSNLQPGAAANACEALGDY 407
ITINNVKNFVLKADDKSIYAKKDAGGVVLVKTNQTILVAVYNSNLQPGAAANACEALGDY
Sbjct: 61 ITINNVKNFVLKADDKSIYAKKDAGGVVLVKTNQTILVAVYNSNLQPGAAANACEALGDY 120

Query: 408 LREQGF 425
LREQGF
Sbjct: 121 LREQGF 126

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 620,874,398
Number of extensions: 11329204
Number of successful extensions: 31448
Number of sequences better than 10.0: 213
Number of HSP's gapped: 31217
Number of HSP's successfully gapped: 213
Length of query: 146
Length of database: 1,040,966,779
Length adjustment: 109
Effective length of query: 37
Effective length of database: 691,699,714
Effective search space: 25592889418
Effective search space used: 25592889418
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)

PSORT

psg: 0.70 gvh: 0.54 alm: 0.39 top: 0.53 tms: 0.00 mit: 0.23 mip: 0.02
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

60.0 %: cytoplasmic
32.0 %: nuclear
4.0 %: mitochondrial
4.0 %: peroxisomal

>> prediction for Contig-U06555-1 is cyt

VS (DIR, S) 2
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0