| Contig-U06515-1 |
| Contig ID |
Contig-U06515-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
637 |
| Chromosome number (1..6, M) |
4 |
| Chromosome length |
5430582 |
| Start point |
3942334 |
| End point |
3941703 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
1 |
| Number of EST |
2 |
| Link to clone list |
U06515 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11. 8 |
| Homology vs DNA |
Query= Contig-U06515-1 (Contig-U06515-1Q) /CSM_Contig/Contig-U06515-1Q.Seq.d
(637 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU263651) Dictyostelium discoideum vegetative cDNA clone:VS... 912 0.0 1
(AU263652) Dictyostelium discoideum vegetative cDNA clone:VS... 412 e-111 1
(AE014816) Plasmodium falciparum 3D7 chromosome 14 section 1... 74 7e-09 1
(CA856219) PfESToac58e08.y1 Plasmodium falciparum 3D7 gameto... 74 7e-09 1
(CA854954) PfESToac44d08.y1 Plasmodium falciparum 3D7 gameto... 74 7e-09 1
(CD452247) USDA-FP_104668 Adult Alate Brown Citrus Aphid Tox... 62 1e-06 2
(AJ516493) Mytilus galloprovincialis EST, clone GPPD00472. 60 1e-05 2
(EU847730) Anisodactylus poeciloides voucher N75_Barnst_Apoe... 42 1e-04 2
(EU847732) Anisodactylus virens voucher N222_CamStM_Avi_ND5 ... 42 1e-04 2
(EU847733) Anisodactylus virens voucher N223_CamVacc_Avi_ND5... 42 1e-04 2
(EU847731) Anisodactylus poeciloides voucher N218_Suell_Apoe... 42 1e-04 2
(DB748984) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.010 2
(DB741667) Apis mellifera head cDNA, RIKEN full-length enric... 46 0.039 2
(BX835917) Arabidopsis thaliana Full-length cDNA 3PRIM end o... 36 0.28 2
(EV657440) LB03337.CR_G12 GC_BGC-33 Bos taurus cDNA clone IM... 42 0.37 2
(CU855640) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.39 1
(AC229635) Monodelphis domestica clone VMRC18-417A4, WORKING... 48 0.39 1
(AC166580) Bos taurus clone CH240-182I2, WORKING DRAFT SEQUE... 48 0.39 1
(DB775855) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.39 1
(DB768588) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.39 1
(DB761307) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.39 1
(DB757130) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.39 1
(CB633406) OSIIEb12D18.r OSIIEb Oryza sativa Indica Group cD... 48 0.39 1
(CJ405649) Molgula tectiformis cDNA, gonad clone:mtgd023o12,... 38 0.56 2
(CJ394947) Molgula tectiformis cDNA, gonad clone:mtgd023o12,... 38 0.61 2
(CJ392186) Molgula tectiformis cDNA, gonad clone:mtgd018n09,... 38 0.62 2
(AC224081) Bos taurus clone CH240-450F7, WORKING DRAFT SEQUE... 42 0.63 2
(CJ402793) Molgula tectiformis cDNA, gonad clone:mtgd018n09,... 38 0.79 2
(EL482876) CHUM4819.b1_E06.ab1 CHU(LMS) puzzle sunflower Hel... 42 0.85 2
(DY951061) CHPY7345.b1_A13.ab1 CHP(XYZ) plains sunflower Hel... 42 0.88 2
(AL844179) Zebrafish DNA sequence from clone DKEY-218M22. 38 0.97 6
(AM452896) Vitis vinifera, whole genome shotgun sequence, co... 44 1.1 2
(AP003325) Gallus lafayettei mitochondrial DNA, complete gen... 46 1.5 1
(EJ751844) 1092963041016 Global-Ocean-Sampling_GS-30-02-01-1... 46 1.5 1
(EJ505492) 1095403700584 Global-Ocean-Sampling_GS-28-01-01-1... 46 1.5 1
(EI689573) SB_BBd06-K20.R SB_BBd Sorghum bicolor genomic 3',... 46 1.5 1
(EI305132) GM_WBc0032P06.f GM_WBc Glycine max genomic clone ... 46 1.5 1
(BZ628637) ih61d06.g1 WGS-SbicolorF (DH5a methyl filtered) S... 46 1.5 1
(BZ626190) ih44b08.g1 WGS-SbicolorF (DH5a methyl filtered) S... 46 1.5 1
(FL639764) TG_26_G7 Termite gut library Reticulitermes flavi... 46 1.5 1
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 42 1.7 9
(BY390885) Mus musculus blastocyst blastocyst cDNA, RIKEN fu... 38 1.7 2
(DB915570) Idiosepius paradoxus cDNA, clone:Ip_aB_019_M12, 5... 34 2.0 3
(DU433429) 1098415763908 CHORI-243 Ovis aries genomic clone ... 32 3.1 3
(EH723833) CNMM10249.b1_A20.ab1 CNM(LMS) spotted knapweed Ce... 34 3.2 3
(CR626922) Zebrafish DNA sequence from clone DKEY-33K14 in l... 38 3.2 3
(EH748471) CNMS7809.b1_B09.ab1 CNM(LMS) spotted knapweed Cen... 34 3.3 3
(DY057586) 000112BSMA008437HT BSMA Bos taurus cDNA 5', mRNA ... 38 3.4 2
(AC113383) Homo sapiens chromosome 5 clone RP11-336F20, comp... 38 3.5 5
(EL407836) CFFS5617.b1_A14.ab1 CFF(LMS) safflower Carthamus ... 34 3.6 3
(DY110724) 000516BSVA002616HT BSVA Bos taurus cDNA 5', mRNA ... 38 3.7 2
(DY177630) 000405BTNA003848HT BTNA Bos taurus cDNA 5', mRNA ... 38 3.7 2
(DR040894) BNE00003655 Bigelowiella natans Non-normalized Bi... 34 4.0 2
(DY084985) 000329BCMA007340HT BCMA Bos taurus cDNA 5', mRNA ... 38 4.0 2
(DR039801) BNE00003098 Bigelowiella natans Non-normalized Bi... 34 4.0 2
(AY334310) Percus plicatus NADH dehydrogenase subunit 5 (ND5... 42 4.1 2
(AF190045) Abax carinatus NADH dehydrogenase subunit 5 (ND5)... 40 4.1 2
(BI539702) 452477 MARC 1BOV Bos taurus cDNA 5', mRNA sequence. 38 4.5 2
(AI447711) mr32b06.x1 Soares mouse 3NbMS Mus musculus cDNA c... 36 4.5 2
(DY052987) 000113BSMA006070HT BSMA Bos taurus cDNA 5', mRNA ... 38 4.6 2
(DY126854) 991221BPBA008122HT BPBA Bos taurus cDNA 5', mRNA ... 38 4.6 2
(DY042805) 000406BTNA004843HT BTNA Bos taurus cDNA 5', mRNA ... 38 4.8 2
(DN277450) 1156702 MARC 7BOV Bos taurus cDNA 5', mRNA sequence. 38 5.0 2
(BY499180) Mus musculus bone marrow macrophage cDNA, RIKEN f... 36 5.5 2
(DN276896) 1156105 MARC 7BOV Bos taurus cDNA 5', mRNA sequence. 38 5.7 2
(BB794088) Mus musculus B lymphocyte B cells CRL-1702 WEHI 2... 36 5.7 2
(CJ212630) Mus musculus 4 days embryo whole body cDNA, RIKEN... 36 5.7 2
(D50365) Procrustes kolbei mitochondrial DNA for NADH dehydr... 36 5.7 3
(AB101076) Carabus ermaki mitochondrial ND5 gene for NADH de... 36 5.7 3
(AB101073) Carabus vietinghoffi mitochondrial ND5 gene for N... 36 5.7 3
(AB101072) Carabus schoenherri schoenherri mitochondrial ND5... 36 5.7 3
(AB101071) Carabus schoenherri schoenherri mitochondrial ND5... 36 5.7 3
(AB101070) Carabus schoenherri sajanus mitochondrial ND5 gen... 36 5.7 3
(AB101069) Carabus imperialis mitochondrial ND5 gene for NAD... 36 5.7 3
(EV616949) LB011151.CR_P22 GC_BGC-11 Bos taurus cDNA clone I... 38 5.8 2
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2... 34 6.0 8
(BY512994) Mus musculus bone marrow macrophage cDNA, RIKEN f... 36 6.0 2
(AY662753) Monocirrhus polyacanthus cytochrome oxidase subun... 44 6.0 1
(EF039803) Synthetic construct Bacillus anthracis clone FLH2... 44 6.0 1
(BV322299) S236P6451FD4.T0 AlaskanMalamute Canis familiaris ... 44 6.0 1
(DD002712) Polynucleotides which are of nature B2/D+ A- and ... 44 6.0 1
(AX702532) Sequence 118 from Patent WO02059320. 44 6.0 1
(AX275960) Sequence 569 from Patent WO0166572. 44 6.0 1
(AC104842) Homo sapiens BAC clone RP11-544D5 from 2, complet... 44 6.0 1
(AC162592) Bos taurus clone CH240-117D24, WORKING DRAFT SEQU... 44 6.0 1
(AC151039) Callithrix jacchus clone CH259-45O7, WORKING DRAF... 44 6.0 1
(AC128332) Rattus norvegicus clone CH230-206O1, WORKING DRAF... 44 6.0 1
(AC118883) Rattus norvegicus clone CH230-481P19, WORKING DRA... 44 6.0 1
(AC117914) Rattus norvegicus clone CH230-227F24, *** SEQUENC... 44 6.0 1
(AC110661) Rattus norvegicus clone CH230-165N2, *** SEQUENCI... 44 6.0 1
(AC095519) Rattus norvegicus clone CH230-7O7, *** SEQUENCING... 44 6.0 1
(AC095176) Rattus norvegicus clone CH230-8J18, *** SEQUENCIN... 44 6.0 1
(AC200986) Strongylocentrotus purpuratus clone R3-12B22, WOR... 44 6.0 1
(AC178944) Strongylocentrotus purpuratus clone R3-3121E8, WO... 44 6.0 1
(AC173629) Strongylocentrotus purpuratus clone R3-46C12, WOR... 44 6.0 1
(EK101583) 1092963019555 Global-Ocean-Sampling_GS-31-01-01-1... 44 6.0 1
(EK070375) 1092960187571 Global-Ocean-Sampling_GS-31-01-01-1... 44 6.0 1
(CT500356) A BAC library has been constructed from cultivar ... 44 6.0 1
(ES224218) MpHnorm_ag5_E03 Myzus persicae, tobacco lineage, ... 44 6.0 1
(EH629812) EST919 LK04 Laupala kohalensis cDNA clone 1061021... 44 6.0 1
>(AU263651) Dictyostelium discoideum vegetative cDNA clone:VSD208,
5' end single read.
Length = 638
Score = 912 bits (460), Expect = 0.0
Identities = 460/460 (100%)
Strand = Plus / Plus
Query: 178 gtattttaccaagtaaaattaaaggtcgtggagcaaataatagtgattcaatggatattg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 gtattttaccaagtaaaattaaaggtcgtggagcaaataatagtgattcaatggatattg 237
Query: 238 attcaagtgaaagatattcaggtaaaggtggtgaatttcattcattaaatgatgatggtg 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 attcaagtgaaagatattcaggtaaaggtggtgaatttcattcattaaatgatgatggtg 297
Query: 298 gtgataaagttggagaaccattgaaatcaattgaaggttggattatatttgttagaaata 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gtgataaagttggagaaccattgaaatcaattgaaggttggattatatttgttagaaata 357
Query: 358 ttcaagaggaagttcaagaaccagatttaatggatatattcgcagagtatggacaaatta 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ttcaagaggaagttcaagaaccagatttaatggatatattcgcagagtatggacaaatta 417
Query: 418 aaaatattcatttaaacattgatagaagaacaggttttacaaaaggttatgctttaattg 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aaaatattcatttaaacattgatagaagaacaggttttacaaaaggttatgctttaattg 477
Query: 478 aatatgaaaagagatctgaagctgaggatgcaattaaaaatggttcaggttatgaattgg 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aatatgaaaagagatctgaagctgaggatgcaattaaaaatggttcaggttatgaattgg 537
Query: 538 ctggtttgaaattatctgtagattgggcattcatcactggtaatgcttcattatcttctg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ctggtttgaaattatctgtagattgggcattcatcactggtaatgcttcattatcttctg 597
Query: 598 gtgtcgtttcttttaaatcaaatagaaaagataaaaataa 637
||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gtgtcgtttcttttaaatcaaatagaaaagataaaaataa 637
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 646,937,114
Number of extensions: 41759858
Number of successful extensions: 3530737
Number of sequences better than 10.0: 182
Length of query: 637
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 614
Effective length of database: 93,106,754,628
Effective search space: 57167547341592
Effective search space used: 57167547341592
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.22 |
| Homology vs Protein |
Query= Contig-U06515-1 (Contig-U06515-1Q) /CSM_Contig/Contig-U06515-1Q.Seq.d
(637 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ286856_1(DQ286856|pid:none) Taiwania cryptomerioides Y14 prote... 132 6e-30
DQ019637_1(DQ019637|pid:none) Triticum aestivum mRNA transport f... 132 1e-29
BT070383_1(BT070383|pid:none) Picea sitchensis clone WS02726_C23... 131 2e-29
AJ313096_1(AJ313096|pid:none) Beta vulgaris mRNA for salt tolera... 129 9e-29
EF145897_1(EF145897|pid:none) Populus trichocarpa clone WS0114_C... 127 3e-28
EU967452_1(EU967452|pid:none) Zea mays clone 303216 RNA-binding ... 126 6e-28
BT084917_1(BT084917|pid:none) Zea mays full-length cDNA clone ZM... 125 1e-27
FN357295_25(FN357295|pid:none) Schistosoma mansoni genome sequen... 122 9e-27
EF432574_1(EF432574|pid:none) Schistosoma japonicum tsunagi (tsu... 122 9e-27
DQ443138_1(DQ443138|pid:none) Bombyx mori RNA binding motif prot... 120 2e-26
S43599(S43599)Snf5 homolog R07E5.3 - Caenorhabditis elegans 119 7e-26
F88427(F88427) protein R07E5.14 [imported] - Caenorhabditis eleg... 117 3e-25
AY647161_1(AY647161|pid:none) Equus caballus RNA binding motif p... 117 3e-25
AF182415_1(AF182415|pid:none) Homo sapiens MDS014 (MDS014) mRNA,... 117 4e-25
AY890857_1(AY890857|pid:none) Synthetic construct Homo sapiens c... 117 4e-25
BT057535_1(BT057535|pid:none) Salmo salar clone ssal-eve-536-368... 115 1e-24
AB174344_1(AB174344|pid:none) Macaca fascicularis brain cDNA clo... 115 1e-24
AB069905_1(AB069905|pid:none) Oryzias latipes RBM8 mRNA for RNA ... 115 1e-24
AK009953_1(AK009953|pid:none) Mus musculus adult male tongue cDN... 115 1e-24
(Q3ZCE8) RecName: Full=RNA-binding protein 8A; AltName: Full=RNA... 115 1e-24
DQ214460_1(DQ214460|pid:none) Taeniopygia guttata clone 0058P003... 114 2e-24
DQ200389_1(DQ200389|pid:none) Solanum tuberosum clone 066H10 unk... 114 2e-24
BT043746_1(BT043746|pid:none) Salmo salar clone HM6_0667 RNA bin... 114 3e-24
BT073799_1(BT073799|pid:none) Oncorhynchus mykiss clone omyk-evo... 114 3e-24
BC157757_1(BC157757|pid:none) Xenopus tropicalis RNA binding mot... 113 5e-24
AF299119_1(AF299119|pid:none) Xenopus laevis RNA-binding protein... 112 7e-24
BC056659_1(BC056659|pid:none) Xenopus laevis hypothetical protei... 112 7e-24
BT082533_1(BT082533|pid:none) Anoplopoma fimbria clone afim-evh-... 112 1e-23
BT082311_1(BT082311|pid:none) Anoplopoma fimbria clone afim-evh-... 111 2e-23
BT079282_1(BT079282|pid:none) Esox lucius clone eluc-evq-502-347... 111 2e-23
(Q9V535) RecName: Full=RNA-binding protein 8A; AltName: Full=Pro... 110 3e-23
BT083336_1(BT083336|pid:none) Anoplopoma fimbria clone afim-evh-... 110 3e-23
CP001324_229(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 110 3e-23
AY071005_1(AY071005|pid:none) Drosophila melanogaster RE09075 fu... 108 1e-22
AC137621_11(AC137621|pid:none) Oryza sativa (japonica cultivar-g... 107 3e-22
AF173550_1(AF173550|pid:none) Drosophila melanogaster Tsunagi (t... 107 3e-22
CR940352_634(CR940352|pid:none) Theileria annulata strain Ankara... 107 3e-22
EF583523_1(EF583523|pid:none) Antrodia cinnamomea Y14 protein mR... 105 1e-21
AC135595_12(AC135595|pid:none) Oryza sativa chromosome 3 BAC OSJ... 103 3e-21
EU966310_1(EU966310|pid:none) Zea mays clone 293437 RNA-binding ... 103 3e-21
AM270139_30(AM270139|pid:none) Aspergillus niger contig An07c022... 102 1e-20
AE014187_54(AE014187|pid:none) Plasmodium falciparum 3D7 chromos... 98 2e-19
CU633438_216(CU633438|pid:none) Podospora anserina genomic DNA c... 95 1e-18
CR382131_105(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 92 2e-17
(O42847) RecName: Full=Uncharacterized RNA-binding protein C23A1... 87 4e-16
AM910995_414(AM910995|pid:none) Plasmodium knowlesi strain H chr... 86 9e-16
AE017343_511(AE017343|pid:none) Cryptococcus neoformans var. neo... 80 4e-14
(Q6DRC4) RecName: Full=Eukaryotic translation initiation factor ... 67 6e-10
(Q28CY2) RecName: Full=Eukaryotic translation initiation factor ... 66 7e-10
EF147516_1(EF147516|pid:none) Populus trichocarpa clone WS0123_B... 66 7e-10
(Q6DJI8) RecName: Full=Eukaryotic translation initiation factor ... 66 7e-10
AK060351_1(AK060351|pid:none) Oryza sativa Japonica Group cDNA c... 65 2e-09
AK291320_1(AK291320|pid:none) Homo sapiens cDNA FLJ76297 complet... 64 3e-09
CP001344_909(CP001344|pid:none) Cyanothece sp. PCC 7425, complet... 64 3e-09
AK220979_1(AK220979|pid:none) Arabidopsis thaliana mRNA for euka... 64 3e-09
BT049926_1(BT049926|pid:none) Salmo salar clone ssal-eve-552-345... 64 3e-09
BT047623_1(BT047623|pid:none) Salmo salar clone ssal-evf-578-004... 64 3e-09
AF291712_1(AF291712|pid:none) Arabidopsis thaliana initiation fa... 64 3e-09
AB170437_1(AB170437|pid:none) Macaca fascicularis brain cDNA clo... 64 3e-09
AY891947_1(AY891947|pid:none) Synthetic construct Homo sapiens c... 64 4e-09
(Q3ZC12) RecName: Full=Eukaryotic translation initiation factor ... 64 4e-09
(Q9Z1D1) RecName: Full=Eukaryotic translation initiation factor ... 64 4e-09
CP001287_332(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 63 6e-09
DQ497201_1(DQ497201|pid:none) Bombyx mori cleavage stimulation f... 63 8e-09
U70733_1(U70733|pid:none) Mus musculus translation initiation fa... 62 1e-08
AM425899_1(AM425899|pid:none) Vitis vinifera contig VV78X141954.... 62 1e-08
EF082940_1(EF082940|pid:none) Picea sitchensis clone WS02726_E04... 62 1e-08
CP000828_5426(CP000828|pid:none) Acaryochloris marina MBIC11017,... 61 3e-08
CP000806_1940(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 61 3e-08
AY641433_1(AY641433|pid:none) Triticum aestivum eukaryotic trans... 60 4e-08
T22767(T22767) hypothetical protein F56A8.6 - Caenorhabditis ele... 60 4e-08
CP001037_730(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 60 4e-08
CP000828_2532(CP000828|pid:none) Acaryochloris marina MBIC11017,... 60 5e-08
AY072407_1(AY072407|pid:none) Arabidopsis thaliana eukaryotic tr... 60 7e-08
(Q9H0L4) RecName: Full=Cleavage stimulation factor 64 kDa subuni... 60 7e-08
(Q8C7E9) RecName: Full=Cleavage stimulation factor 64 kDa subuni... 60 7e-08
BC028239_1(BC028239|pid:none) Homo sapiens cleavage stimulation ... 60 7e-08
BC169065_1(BC169065|pid:none) Rattus norvegicus cleavage stimula... 60 7e-08
AK084696_1(AK084696|pid:none) Mus musculus 13 days embryo heart ... 60 7e-08
AL671915_5(AL671915|pid:none) Mouse DNA sequence from clone RP23... 59 9e-08
CP001344_55(CP001344|pid:none) Cyanothece sp. PCC 7425, complete... 59 9e-08
(Q5RDA3) RecName: Full=Cleavage stimulation factor 64 kDa subuni... 59 9e-08
BC126543_1(BC126543|pid:none) Bos taurus cleavage stimulation fa... 59 9e-08
(Q8HXM1) RecName: Full=Cleavage stimulation factor 64 kDa subuni... 59 9e-08
EU616680_1(EU616680|pid:none) Mus musculus betaCstF-64 variant 3... 59 9e-08
EU616682_1(EU616682|pid:none) Mus musculus betaCstF-64 variant 1... 59 9e-08
AJ719664_1(AJ719664|pid:none) Gallus gallus mRNA for hypothetica... 59 9e-08
BC033135_1(BC033135|pid:none) Homo sapiens, Similar to cleavage ... 59 9e-08
AK032817_1(AK032817|pid:none) Mus musculus 12 days embryo male w... 59 9e-08
BC041291_1(BC041291|pid:none) Xenopus laevis cleavage stimulatio... 59 9e-08
CP000581_580(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 59 1e-07
DQ211984_1(DQ211984|pid:none) Toxoplasma gondii eukaryotic trans... 59 1e-07
BC065442_1(BC065442|pid:none) Danio rerio cleavage stimulation f... 59 1e-07
CP000806_146(CP000806|pid:none) Cyanothece sp. ATCC 51142 circul... 59 2e-07
BT004860_1(BT004860|pid:none) Drosophila melanogaster RE27227 fu... 59 2e-07
AE014297_2648(AE014297|pid:none) Drosophila melanogaster chromos... 59 2e-07
CP001344_1126(CP001344|pid:none) Cyanothece sp. PCC 7425, comple... 58 2e-07
AL844509_209(AL844509|pid:none) Plasmodium falciparum 3D7 chromo... 58 2e-07
CP000840_74(CP000840|pid:none) Acaryochloris marina MBIC11017 pl... 58 3e-07
(A6SGN8) RecName: Full=Eukaryotic translation initiation factor ... 58 3e-07
AP005535_14(AP005535|pid:none) Oryza sativa Japonica Group genom... 58 3e-07
CP001291_1633(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 58 3e-07
CP001287_1018(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 58 3e-07
CP000975_286(CP000975|pid:none) Methylacidiphilum infernorum V4,... 58 3e-07
AF176673_1(AF176673|pid:none) Gallus gallus RNA-binding protein ... 57 3e-07
AM778891_13(AM778891|pid:none) Microcystis aeruginosa PCC 7806 g... 57 3e-07
AP009552_3215(AP009552|pid:none) Microcystis aeruginosa NIES-843... 57 3e-07
AK067130_1(AK067130|pid:none) Oryza sativa Japonica Group cDNA c... 57 3e-07
AM778891_14(AM778891|pid:none) Microcystis aeruginosa PCC 7806 g... 57 3e-07
(Q44554) RecName: Full=Putative RNA-binding protein rbpB; &AI21... 57 3e-07
CP000139_523(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, ... 57 3e-07
BA000039_2254(BA000039|pid:none) Thermosynechococcus elongatus B... 57 4e-07
CP000473_989(CP000473|pid:none) Solibacter usitatus Ellin6076, c... 57 4e-07
(P40565) RecName: Full=U2 snRNP component IST3; AltName: Full=U2... 57 4e-07
CR954201_559(CR954201|pid:none) Ostreococcus tauri strain OTTH05... 57 4e-07
AC108906_21(AC108906|pid:none) Oryza sativa chromosome 3 BAC OSJ... 57 4e-07
CP000393_4135(CP000393|pid:none) Trichodesmium erythraeum IMS101... 57 4e-07
AM910996_196(AM910996|pid:none) Plasmodium knowlesi strain H chr... 57 4e-07
BT060465_1(BT060465|pid:none) Zea mays full-length cDNA clone ZM... 57 6e-07
EU972323_1(EU972323|pid:none) Zea mays clone 379656 hypothetical... 57 6e-07
AC120539_27(AC120539|pid:none) Oryza sativa (japonica cultivar-g... 57 6e-07
CP000110_14(CP000110|pid:none) Synechococcus sp. CC9605, complet... 57 6e-07
EF676472_1(EF676472|pid:none) Picea sitchensis clone WS02739_B06... 57 6e-07
X92980_1(X92980|pid:none) A.variabilis rbp gene. 57 6e-07
BT038473_1(BT038473|pid:none) Zea mays full-length cDNA clone ZM... 57 6e-07
BT045701_1(BT045701|pid:none) Salmo salar clone ssal-rgf-529-045... 57 6e-07
AP008209_3108(AP008209|pid:none) Oryza sativa (japonica cultivar... 56 8e-07
AM463653_3(AM463653|pid:none) Vitis vinifera contig VV78X030354.... 56 8e-07
DQ019630_1(DQ019630|pid:none) Triticum aestivum alternative spli... 56 8e-07
CP000733_1149(CP000733|pid:none) Coxiella burnetii Dugway 5J108-... 56 8e-07
CP001110_1298(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 56 8e-07
CP000890_1144(CP000890|pid:none) Coxiella burnetii RSA 331, comp... 56 8e-07
AE016828_1012(AE016828|pid:none) Coxiella burnetii RSA 493, comp... 56 8e-07
CP000584_340(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 56 8e-07
(Q9WX39) RecName: Full=Putative RNA-binding protein rbpF; &AB00... 56 8e-07
AP006841_2166(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 56 8e-07
CP001037_5335(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 56 8e-07
AM778953_108(AM778953|pid:none) Microcystis aeruginosa PCC 7806 ... 56 1e-06
CP000838_96(CP000838|pid:none) Acaryochloris marina MBIC11017 pl... 56 1e-06
AP008231_850(AP008231|pid:none) Synechococcus elongatus PCC 6301... 56 1e-06
Z95327_4(Z95327|pid:none) Human DNA sequence from clone RP3-347M... 56 1e-06
BC073641_1(BC073641|pid:none) Xenopus laevis MGC82977 protein, m... 56 1e-06
BX294151_174(BX294151|pid:none) Rhodopirellula baltica SH 1 comp... 56 1e-06
FM992690_195(FM992690|pid:none) Candida dubliniensis CD36 chromo... 56 1e-06
BX842649_260(BX842649|pid:none) Bdellovibrio bacteriovorus compl... 56 1e-06
AM910987_170(AM910987|pid:none) Plasmodium knowlesi strain H chr... 56 1e-06
CP000586_398(CP000586|pid:none) Ostreococcus lucimarinus CCE9901... 56 1e-06
BX548154_1(BX548154|pid:none) clone A24K23, A41I8 of Tetraodon n... 55 1e-06
CP000828_1947(CP000828|pid:none) Acaryochloris marina MBIC11017,... 55 1e-06
BT030067_1(BT030067|pid:none) Arabidopsis thaliana At3g49430 gen... 55 1e-06
BC158521_1(BC158521|pid:none) Xenopus tropicalis hypothetical pr... 55 1e-06
(Q9P6P7) RecName: Full=Uncharacterized RNA-binding protein C644.... 55 2e-06
BC049051_1(BC049051|pid:none) Danio rerio splicing factor, argin... 55 2e-06
(Q5AJS6) RecName: Full=Multiple RNA-binding domain-containing pr... 55 2e-06
CR857074_1(CR857074|pid:none) Pongo abelii mRNA; cDNA DKFZp468L0... 55 2e-06
(Q9UHX1) RecName: Full=Poly(U)-binding-splicing factor PUF60; Al... 55 2e-06
BC011265_1(BC011265|pid:none) Homo sapiens poly-U binding splici... 55 2e-06
BC009734_1(BC009734|pid:none) Homo sapiens poly-U binding splici... 55 2e-06
AF165892_1(AF165892|pid:none) Rattus norvegicus RNA-binding prot... 55 2e-06
BC119437_1(BC119437|pid:none) Mus musculus poly-U binding splici... 55 2e-06
CP000462_1744(CP000462|pid:none) Aeromonas hydrophila subsp. hyd... 55 2e-06
AF217197_1(AF217197|pid:none) Homo sapiens FBP-interacting repre... 55 2e-06
BT043938_1(BT043938|pid:none) Salmo salar clone HM4_1724 embryon... 55 2e-06
(Q5R469) RecName: Full=Poly(U)-binding-splicing factor PUF60; Al... 55 2e-06
CR940347_358(CR940347|pid:none) Theileria annulata strain Ankara... 55 2e-06
AK151526_1(AK151526|pid:none) Mus musculus bone marrow macrophag... 55 2e-06
CP000240_298(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-13... 55 2e-06
(Q2HJG2) RecName: Full=Poly(U)-binding-splicing factor PUF60; Al... 55 2e-06
U51586_1(U51586|pid:none) Human siah binding protein 1 (SiahBP1)... 55 2e-06
AK149632_1(AK149632|pid:none) Mus musculus bone marrow macrophag... 55 2e-06
CP000828_527(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 55 2e-06
AM445604_2(AM445604|pid:none) Vitis vinifera contig VV78X206771.... 55 2e-06
AE013599_4167(AE013599|pid:none) Drosophila melanogaster chromos... 55 2e-06
AK160232_1(AK160232|pid:none) Mus musculus 11 days embryo whole ... 55 2e-06
BT044496_1(BT044496|pid:none) Drosophila melanogaster FI03862 fu... 55 2e-06
AP009552_4584(AP009552|pid:none) Microcystis aeruginosa NIES-843... 55 2e-06
CP000777_1786(CP000777|pid:none) Leptospira biflexa serovar Pato... 55 2e-06
FB912191_1(FB912191|pid:none) Sequence 131464 from Patent WO2008... 55 2e-06
BC077169_1(BC077169|pid:none) Xenopus laevis cDNA clone MGC:7876... 54 3e-06
BC044184_1(BC044184|pid:none) Danio rerio ELAV (embryonic lethal... 54 3e-06
AM471738_1(AM471738|pid:none) Vitis vinifera contig VV78X179691.... 54 3e-06
BX323559_6(BX323559|pid:none) Zebrafish DNA sequence from clone ... 54 3e-06
EF677312_1(EF677312|pid:none) Picea sitchensis clone WS02765_E09... 54 3e-06
I50511(I50511) ribonucleoprotein - zebra fish (fragment) &U1760... 54 3e-06
BX323559_10(BX323559|pid:none) Zebrafish DNA sequence from clone... 54 3e-06
BX323559_5(BX323559|pid:none) Zebrafish DNA sequence from clone ... 54 3e-06
BC102495_1(BC102495|pid:none) Bos taurus ELAV (embryonic lethal,... 54 3e-06
(Q44556) RecName: Full=Putative RNA-binding protein rbpD; &AG23... 54 4e-06
AK301013_1(AK301013|pid:none) Homo sapiens cDNA FLJ60076 complet... 54 4e-06
EU973819_1(EU973819|pid:none) Zea mays clone 418501 splicing fac... 54 4e-06
AK089088_1(AK089088|pid:none) Mus musculus 2 days neonate thymus... 54 4e-06
(Q6PFR5) RecName: Full=Transformer-2 protein homolog alpha; AltN... 54 4e-06
(P40561) RecName: Full=RNA-binding protein SGN1; &S48435(S48435... 54 4e-06
(Q9NEW6) RecName: Full=Probable splicing factor, arginine/serine... 54 4e-06
AK161667_1(AK161667|pid:none) Mus musculus 8 days embryo whole b... 54 4e-06
BC074599_1(BC074599|pid:none) Xenopus tropicalis transformer-2 a... 54 4e-06
BC161978_1(BC161978|pid:none) Rattus norvegicus transformer-2 al... 54 4e-06
BX569689_14(BX569689|pid:none) Synechococcus sp. WH8102 complete... 54 4e-06
CP000393_1589(CP000393|pid:none) Trichodesmium erythraeum IMS101... 54 4e-06
AK148528_1(AK148528|pid:none) Mus musculus adult pancreas islet ... 54 4e-06
AK034536_1(AK034536|pid:none) Mus musculus 12 days embryo embryo... 54 4e-06
AM920431_1448(AM920431|pid:none) Penicillium chrysogenum Wiscons... 54 4e-06
AK106176_1(AK106176|pid:none) Oryza sativa Japonica Group cDNA c... 54 4e-06
AC012654_18(AC012654|pid:none) Arabidopsis thaliana chromosome 1... 54 4e-06
DQ972958_1(DQ972958|pid:none) Sus scrofa TRA2A mRNA, complete cds. 54 4e-06
AC2391(AC2391) RNA-binding protein [imported] - Nostoc sp. (stra... 54 4e-06
AJ719598_1(AJ719598|pid:none) Gallus gallus mRNA for hypothetica... 54 4e-06
AB173584_1(AB173584|pid:none) Macaca fascicularis brain cDNA clo... 54 4e-06
AM269959_20(AM269959|pid:none) Aspergillus niger contig An01c012... 54 4e-06
AB168603_1(AB168603|pid:none) Macaca fascicularis testis cDNA cl... 54 4e-06
EU797611_1(EU797611|pid:none) Ovis aries TRA2A mRNA, complete cds. 54 4e-06
BT067913_1(BT067913|pid:none) Zea mays full-length cDNA clone ZM... 54 5e-06
AY649842_2(AY649842|pid:none) Zea mays ASF/SF2-like pre-mRNA spl... 54 5e-06
EU961409_1(EU961409|pid:none) Zea mays clone 235210 unknown mRNA. 54 5e-06
(Q66II8) RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa... 54 5e-06
AB008268_3(AB008268|pid:none) Arabidopsis thaliana genomic DNA, ... 54 5e-06
BA000022_1019(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 54 5e-06
CP000393_4134(CP000393|pid:none) Trichodesmium erythraeum IMS101... 54 5e-06
BT074603_1(BT074603|pid:none) Osmerus mordax clone omor-rgc-514-... 54 5e-06
BC116459_1(BC116459|pid:none) Xenopus laevis ribonucleoprotein, ... 54 5e-06
BT068530_1(BT068530|pid:none) Zea mays full-length cDNA clone ZM... 54 5e-06
CP000095_13(CP000095|pid:none) Prochlorococcus marinus str. NATL... 54 5e-06
AX969455_1(AX969455|pid:none) Sequence 258 from Patent EP1104808. 54 5e-06
AC135927_5(AC135927|pid:none) Oryza sativa (japonica cultivar-gr... 53 6e-06
FN392319_66(FN392319|pid:none) Pichia pastoris GS115 chromosome ... 53 6e-06
CP000097_1394(CP000097|pid:none) Synechococcus sp. CC9902, compl... 53 6e-06
(Q9UE45) RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa... 53 6e-06
CP001100_1585(CP001100|pid:none) Chloroherpeton thalassium ATCC ... 53 6e-06
AC137701_16(AC137701|pid:none) Medicago truncatula clone mth2-35... 53 6e-06
AP008211_951(AP008211|pid:none) Oryza sativa (japonica cultivar-... 53 6e-06
AF173640_2(AF173640|pid:none) Arabidopsis thaliana splicing fact... 53 6e-06
BX548175_1418(BX548175|pid:none) Prochlorococcus marinus MIT9313... 53 6e-06
CR848632_1(CR848632|pid:none) Xenopus tropicalis finished cDNA, ... 53 6e-06
CT978603_14(CT978603|pid:none) Synechococcus sp. RCC307 genomic ... 53 6e-06
AF001035_2(AF001035|pid:none) Arabidopsis thaliana ASF/SF2 homol... 53 6e-06
(Q62376) RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa... 53 6e-06
AX969680_1(AX969680|pid:none) Sequence 483 from Patent EP1104808. 53 6e-06
AE014298_202(AE014298|pid:none) Drosophila melanogaster chromoso... 53 6e-06
(O22315) RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Fu... 53 6e-06
CP000749_1521(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 53 6e-06
S04336(S04336) U1 snRNP 70K protein (long form) - mouse (fragmen... 53 6e-06
CR382131_373(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 53 6e-06
AF151837_1(AF151837|pid:none) Homo sapiens CGI-79 protein mRNA, ... 53 6e-06
AK070420_1(AK070420|pid:none) Oryza sativa Japonica Group cDNA c... 53 6e-06
M98340_1(M98340|pid:none) Arabidopis thaliana ribonucleoprotein ... 53 6e-06
BC003676_1(BC003676|pid:none) Homo sapiens RNA binding motif pro... 53 6e-06
BC167051_1(BC167051|pid:none) Rattus norvegicus U1 small nuclear... 53 6e-06
L25435_1(L25435|pid:none) Synechococcus sp. RNA-binding protein ... 53 6e-06
AF173640_5(AF173640|pid:none) Arabidopsis thaliana splicing fact... 53 6e-06
CP000554_962(CP000554|pid:none) Prochlorococcus marinus str. MIT... 53 6e-06
AK011564_1(AK011564|pid:none) Mus musculus 10 days embryo whole ... 53 6e-06
BC105582_1(BC105582|pid:none) Homo sapiens RNA binding motif pro... 53 6e-06
AY649843_3(AY649843|pid:none) Zea mays ASF/SF2-like pre-mRNA spl... 53 6e-06
AY649843_2(AY649843|pid:none) Zea mays ASF/SF2-like pre-mRNA spl... 53 6e-06
BC096985_1(BC096985|pid:none) Danio rerio RNA binding motif prot... 53 6e-06
AF173640_1(AF173640|pid:none) Arabidopsis thaliana splicing fact... 53 6e-06
M57939_2(M57939|pid:none) Human small nuclear ribonucleoprotein ... 53 6e-06
AE014298_203(AE014298|pid:none) Drosophila melanogaster chromoso... 53 6e-06
EF678296_1(EF678296|pid:none) Picea sitchensis clone WS02913_E10... 53 6e-06
AY128338_1(AY128338|pid:none) Arabidopsis thaliana SF2/ASF-like ... 53 6e-06
AF173640_3(AF173640|pid:none) Arabidopsis thaliana splicing fact... 53 6e-06
AC135928_11(AC135928|pid:none) Oryza sativa (japonica cultivar-g... 53 6e-06
AE017349_13(AE017349|pid:none) Cryptococcus neoformans var. neof... 53 8e-06
AY649841_3(AY649841|pid:none) Zea mays ASF/SF2-like pre-mRNA spl... 53 8e-06
BT039077_1(BT039077|pid:none) Zea mays full-length cDNA clone ZM... 53 8e-06
(P70372) RecName: Full=ELAV-like protein 1; AltName: Full=Hu-ant... 53 8e-06
AK100642_1(AK100642|pid:none) Oryza sativa Japonica Group cDNA c... 53 8e-06
CP000838_71(CP000838|pid:none) Acaryochloris marina MBIC11017 pl... 53 8e-06
(Q2H0U6) RecName: Full=Eukaryotic translation initiation factor ... 53 8e-06
AP007155_742(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 53 8e-06
BT043372_1(BT043372|pid:none) Zea mays full-length cDNA clone ZM... 53 8e-06
AB026847_1(AB026847|pid:none) Ciona intestinalis CiGRP1 mRNA for... 53 8e-06
AY649841_2(AY649841|pid:none) Zea mays ASF/SF2-like pre-mRNA spl... 53 8e-06
AP008211_42(AP008211|pid:none) Oryza sativa (japonica cultivar-g... 53 8e-06
AM433270_2(AM433270|pid:none) Vitis vinifera contig VV78X203954.... 53 8e-06
L20891_1(L20891|pid:none) Chlorogloeopsis sp. RNA-binding protei... 53 8e-06
(Q16560) RecName: Full=U11/U12 small nuclear ribonucleoprotein 3... 53 8e-06
AL590442_53(AL590442|pid:none) chromosome II of strain GB-M1 of ... 53 8e-06
AK118074_1(AK118074|pid:none) Arabidopsis thaliana At4g02430 mRN... 52 1e-05
T25186(T25186) hypothetical protein T23F6.4 - Caenorhabditis ele... 52 1e-05
(Q5U1W5) RecName: Full=U11/U12 small nuclear ribonucleoprotein 3... 52 1e-05
(Q10B98) RecName: Full=Zinc finger CCCH domain-containing protei... 52 1e-05
AM494966_144(AM494966|pid:none) Leishmania braziliensis chromoso... 52 1e-05
BC086269_1(BC086269|pid:none) Xenopus laevis hypothetical LOC495... 52 1e-05
DQ200373_1(DQ200373|pid:none) Solanum tuberosum clone 059F05 pre... 52 1e-05
CP001160_235(CP001160|pid:none) Thalassiosira pseudonana CCMP133... 52 1e-05
AY070612_1(AY070612|pid:none) Drosophila melanogaster RE71384 fu... 52 1e-05
CR382131_970(CR382131|pid:none) Yarrowia lipolytica strain CLIB1... 52 1e-05
AE014297_3585(AE014297|pid:none) Drosophila melanogaster chromos... 52 1e-05
(Q44560) RecName: Full=Putative RNA-binding protein rbpA; &AC18... 52 1e-05
AE014297_3588(AE014297|pid:none) Drosophila melanogaster chromos... 52 1e-05
AF069298_10(AF069298|pid:none) Arabidopsis thaliana BAC T14P8. ... 52 1e-05
CP000644_1611(CP000644|pid:none) Aeromonas salmonicida subsp. sa... 52 1e-05
CP000435_14(CP000435|pid:none) Synechococcus sp. CC9311, complet... 52 1e-05
(Q6C747) RecName: Full=Eukaryotic translation initiation factor ... 52 1e-05
BC165930_1(BC165930|pid:none) Danio rerio HuG, mRNA (cDNA clone ... 52 1e-05
AK293120_1(AK293120|pid:none) Homo sapiens cDNA FLJ77404 complet... 52 1e-05
AY648811_1(AY648811|pid:none) Danio rerio U1 small ribonucleopro... 52 1e-05
AB003690_1(AB003690|pid:none) Anabaena variabilis rbpA2 gene for... 52 1e-05
CR378681_57(CR378681|pid:none) Photobacterium profundum SS9 chro... 52 1e-05
AF025689_1(AF025689|pid:none) Musca domestica clone MdSxlc1 Sex-... 52 1e-05
AM270167_11(AM270167|pid:none) Aspergillus niger contig An08c012... 52 1e-05
BX842646_292(BX842646|pid:none) Bdellovibrio bacteriovorus compl... 52 1e-05
AY313137_1(AY313137|pid:none) Saccoglossus kowalevskii Hu/elav m... 52 1e-05
BT050206_1(BT050206|pid:none) Salmo salar clone ssal-evf-501-088... 52 1e-05
CR543861_438(CR543861|pid:none) Acinetobacter sp. ADP1 complete ... 52 1e-05
BX927136_1(BX927136|pid:none) Zebrafish DNA sequence from clone ... 52 1e-05
CP000492_1229(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 52 1e-05
BC077089_1(BC077089|pid:none) Danio rerio small nuclear ribonucl... 52 1e-05
BC153844_1(BC153844|pid:none) Bos taurus Ewing sarcoma breakpoin... 52 1e-05
AK070292_1(AK070292|pid:none) Oryza sativa Japonica Group cDNA c... 52 2e-05
AI2066(AI2066) RNA-binding protein RbpA2 [imported] - Nostoc sp.... 52 2e-05
CR940347_866(CR940347|pid:none) Theileria annulata strain Ankara... 52 2e-05
AK039064_1(AK039064|pid:none) Mus musculus adult male hypothalam... 52 2e-05
FN357347_16(FN357347|pid:none) Schistosoma mansoni genome sequen... 52 2e-05
AB209211_1(AB209211|pid:none) Homo sapiens premature mRNA for TI... 52 2e-05
AC003114_19(AC003114|pid:none) Arabidopsis thaliana chromosome 1... 52 2e-05
(P52912) RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-bind... 52 2e-05
(Q9D384) RecName: Full=U11/U12 small nuclear ribonucleoprotein 3... 52 2e-05
L20890_1(L20890|pid:none) Anabaena sp. RNA-binding protein gene,... 52 2e-05
CP000473_7431(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 52 2e-05
AB220469_1(AB220469|pid:none) Macaca fascicularis mRNA, clone Qf... 52 2e-05
AE015928_3838(AE015928|pid:none) Bacteroides thetaiotaomicron VP... 52 2e-05
AB299206_1(AB299206|pid:none) Rana rugosa Tra2 mRNA for transfor... 52 2e-05
(Q7QJV0) RecName: Full=Eukaryotic translation initiation factor ... 52 2e-05
CP000951_264(CP000951|pid:none) Synechococcus sp. PCC 7002, comp... 52 2e-05
AM502247_157(AM502247|pid:none) Leishmania infantum chromosome 29. 52 2e-05
(P31483) RecName: Full=Nucleolysin TIA-1 isoform p40; AltName: F... 52 2e-05
BC095586_1(BC095586|pid:none) Danio rerio splicing factor, argin... 51 2e-05
CP000240_2698(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 51 2e-05
BX548175_14(BX548175|pid:none) Prochlorococcus marinus MIT9313 c... 51 2e-05
AY633610_1(AY633610|pid:none) Homo sapiens aging-associated gene... 51 2e-05
CU638744_74(CU638744|pid:none) Podospora anserina genomic DNA ch... 51 2e-05
BT068264_1(BT068264|pid:none) Zea mays full-length cDNA clone ZM... 51 2e-05
AY016023_9(AY016023|pid:none) Sphoeroides nephelus alpha globin ... 51 2e-05
AY189904_1(AY189904|pid:none) Gallus gallus TIAR mRNA, complete ... 51 2e-05
CR760770_1(CR760770|pid:none) Xenopus tropicalis finished cDNA, ... 51 2e-05
CR382132_337(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 51 2e-05
(Q01085) RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-rel... 51 2e-05
AK290984_1(AK290984|pid:none) Homo sapiens cDNA FLJ75459 complet... 51 2e-05
CP001097_2035(CP001097|pid:none) Chlorobium limicola DSM 245, co... 51 2e-05
AM270269_36(AM270269|pid:none) Aspergillus niger contig An12c013... 51 2e-05
BT084162_1(BT084162|pid:none) Zea mays full-length cDNA clone ZM... 51 2e-05
AM920437_1645(AM920437|pid:none) Penicillium chrysogenum Wiscons... 51 2e-05
T24067(T24067) hypothetical protein R09B3.2 - Caenorhabditis ele... 51 2e-05
CP000435_1021(CP000435|pid:none) Synechococcus sp. CC9311, compl... 51 2e-05
CP000554_14(CP000554|pid:none) Prochlorococcus marinus str. MIT ... 51 2e-05
CR942663_2(CR942663|pid:none) Xenopus tropicalis finished cDNA, ... 51 2e-05
BT038707_1(BT038707|pid:none) Zea mays full-length cDNA clone ZM... 51 2e-05
AK289933_1(AK289933|pid:none) Homo sapiens cDNA FLJ77645 complet... 51 2e-05
CP001101_100(CP001101|pid:none) Chlorobium phaeobacteroides BS1,... 51 3e-05
AY893128_1(AY893128|pid:none) Synthetic construct Homo sapiens c... 51 3e-05
AB209558_1(AB209558|pid:none) Homo sapiens mRNA for splicing fac... 51 3e-05
EF384209_1(EF384209|pid:none) Platynereis dumerilii Elav mRNA, c... 51 3e-05
AK056681_1(AK056681|pid:none) Homo sapiens cDNA FLJ32119 fis, cl... 51 3e-05
AP006841_2265(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 51 3e-05
BT074644_1(BT074644|pid:none) Osmerus mordax clone omor-rgc-516-... 51 3e-05
AB174477_1(AB174477|pid:none) Macaca fascicularis brain cDNA clo... 51 3e-05
AL031186_17(AL031186|pid:none) Human DNA sequence from clone CTA... 51 3e-05
AY891751_1(AY891751|pid:none) Synthetic construct Homo sapiens c... 51 3e-05
(Q01844) RecName: Full=RNA-binding protein EWS; AltName: Full=EW... 51 3e-05
B40040(B40040) alternative splicing factor ASF-2 - human &M7270... 51 3e-05
L13037_1(L13037|pid:none) Drosophila melanogaster nucleolytic po... 51 3e-05
AK018176_1(AK018176|pid:none) Mus musculus adult male medulla ob... 51 3e-05
AP007171_669(AP007171|pid:none) Aspergillus oryzae RIB40 genomic... 51 3e-05
BC128931_1(BC128931|pid:none) Xenopus laevis similar to splicing... 51 3e-05
(Q19706) RecName: Full=Eukaryotic translation initiation factor ... 51 3e-05
(Q1LZH0) RecName: Full=U11/U12 small nuclear ribonucleoprotein 3... 51 3e-05
BC123122_1(BC123122|pid:none) Xenopus laevis similar to splicing... 51 3e-05
CP000815_769(CP000815|pid:none) Paulinella chromatophora chromat... 51 3e-05
CU928179_157(CU928179|pid:none) Zygosaccharomyces rouxii strain ... 51 3e-05
(Q5R7H2) RecName: Full=Splicing factor, arginine/serine-rich 1; ... 51 3e-05
AB384975_1(AB384975|pid:none) Synthetic construct DNA, clone: pF... 51 3e-05
(A8WLV5) RecName: Full=Probable eukaryotic translation initiatio... 51 3e-05
(Q6DII2) RecName: Full=Splicing factor, arginine/serine-rich 1; ... 51 3e-05
AJ249323_1(AJ249323|pid:none) Ciona intestinalis mRNA for glycin... 51 3e-05
AK078715_1(AK078715|pid:none) Mus musculus adult male eyeball cD... 51 3e-05
AM494955_18(AM494955|pid:none) Leishmania braziliensis chromosom... 50 4e-05
(B3P935) RecName: Full=Eukaryotic translation initiation factor ... 50 4e-05
AK028340_1(AK028340|pid:none) Mus musculus 12 days embryo embryo... 50 4e-05
AL928954_3(AL928954|pid:none) Zebrafish DNA sequence from clone ... 50 4e-05
AK248112_1(AK248112|pid:none) Dugesia japonica mRNA for TLS-asso... 50 4e-05
BC056752_1(BC056752|pid:none) Danio rerio splicing factor, argin... 50 4e-05
BC055501_1(BC055501|pid:none) Danio rerio TIA1 cytotoxic granule... 50 4e-05
AK060130_1(AK060130|pid:none) Oryza sativa Japonica Group cDNA c... 50 4e-05
AC135429_9(AC135429|pid:none) Oryza sativa (japonica cultivar-gr... 50 4e-05
AY398424_1(AY398424|pid:none) Danio rerio clone RK068A2A06 TIA1 ... 50 4e-05
AK056309_1(AK056309|pid:none) Homo sapiens cDNA FLJ31747 fis, cl... 50 4e-05
DQ209268_1(DQ209268|pid:none) Bombyx mori sex-lethal isoform 1 (... 50 4e-05
(Q9W4X7) RecName: Full=Eukaryotic translation initiation factor ... 50 4e-05
CU633900_971(CU633900|pid:none) Podospora anserina genomic DNA c... 50 4e-05
AK099731_1(AK099731|pid:none) Oryza sativa Japonica Group cDNA c... 50 4e-05
(Q5KJL5) RecName: Full=Multiple RNA-binding domain-containing pr... 50 4e-05
BX901876_3(BX901876|pid:none) Zebrafish DNA sequence from clone ... 50 4e-05
CP001110_1948(CP001110|pid:none) Pelodictyon phaeoclathratiforme... 50 4e-05
AB463036_1(AB463036|pid:none) Synthetic construct DNA, clone: pF... 50 4e-05
(B4J4G8) RecName: Full=Eukaryotic translation initiation factor ... 50 4e-05
BT045808_1(BT045808|pid:none) Salmo salar clone ssal-rgf-531-375... 50 4e-05
(B4MA85) RecName: Full=Eukaryotic translation initiation factor ... 50 4e-05
AE014298_2516(AE014298|pid:none) Drosophila melanogaster chromos... 50 4e-05
EF154334_1(EF154334|pid:none) Bombyx mori ELAV (elav) mRNA, comp... 50 4e-05
(B3MYX2) RecName: Full=Eukaryotic translation initiation factor ... 50 4e-05
FN392322_746(FN392322|pid:none) Pichia pastoris GS115 chromosome... 50 4e-05
AL583843_2(AL583843|pid:none) Human DNA sequence from clone RP11... 50 5e-05
AL627425_2(AL627425|pid:none) Mouse DNA sequence from clone RP23... 50 5e-05
AL627425_4(AL627425|pid:none) Mouse DNA sequence from clone RP23... 50 5e-05
AL645845_3(AL645845|pid:none) Mouse DNA sequence from clone RP23... 50 5e-05
AE017126_13(AE017126|pid:none) Prochlorococcus marinus subsp. ma... 50 5e-05
(P26378) RecName: Full=ELAV-like protein 4; AltName: Full=Parane... 50 5e-05
AM270131_43(AM270131|pid:none) Aspergillus niger contig An07c013... 50 5e-05
AK298817_1(AK298817|pid:none) Homo sapiens cDNA FLJ51957 complet... 50 5e-05
AE017126_1195(AE017126|pid:none) Prochlorococcus marinus subsp. ... 50 5e-05
I49144(I49144) ribonucleoprotein - mouse (fragment) &U17595_1(U... 50 5e-05
AL583843_1(AL583843|pid:none) Human DNA sequence from clone RP11... 50 5e-05
AE014134_1278(AE014134|pid:none) Drosophila melanogaster chromos... 50 5e-05
AE014134_1280(AE014134|pid:none) Drosophila melanogaster chromos... 50 5e-05
AE017341_447(AE017341|pid:none) Cryptococcus neoformans var. neo... 50 5e-05
AP008209_1440(AP008209|pid:none) Oryza sativa (japonica cultivar... 50 5e-05
CP000139_431(CP000139|pid:none) Bacteroides vulgatus ATCC 8482, ... 50 5e-05
AF041341_1(AF041341|pid:none) Mus musculus RNA binding protein E... 50 5e-05
AK019460_1(AK019460|pid:none) Mus musculus 18 days pregnant adul... 50 5e-05
AL583843_3(AL583843|pid:none) Human DNA sequence from clone RP11... 50 5e-05
(A1C646) RecName: Full=Eukaryotic translation initiation factor ... 50 5e-05
AK061903_1(AK061903|pid:none) Oryza sativa Japonica Group cDNA c... 50 5e-05
(Q9D0B0) RecName: Full=Splicing factor, arginine/serine-rich 9; ... 50 5e-05
(Q61701) RecName: Full=ELAV-like protein 4; AltName: Full=Parane... 50 5e-05
AK079088_1(AK079088|pid:none) Mus musculus adult male diencephal... 50 5e-05
AK159190_1(AK159190|pid:none) Mus musculus osteoclast-like cell ... 50 7e-05
AB092510_1(AB092510|pid:none) Bombyx mori mRNA for TIA-1 homolog... 50 7e-05
AK290644_1(AK290644|pid:none) Homo sapiens cDNA FLJ76387 complet... 50 7e-05
CP000498_481(CP000498|pid:none) Pichia stipitis CBS 6054 chromos... 50 7e-05
CP000878_14(CP000878|pid:none) Prochlorococcus marinus str. MIT ... 50 7e-05
T09704(T09704) probable arginine/serine-rich splicing factor - a... 50 7e-05
AK291239_1(AK291239|pid:none) Homo sapiens cDNA FLJ76290 complet... 50 7e-05
BC167878_1(BC167878|pid:none) Xenopus tropicalis cDNA clone MGC:... 50 7e-05
BT059149_1(BT059149|pid:none) Salmo salar clone ssal-rgf-528-152... 50 7e-05
BT052594_1(BT052594|pid:none) Medicago truncatula clone MTYFD_FE... 50 7e-05
AM502236_17(AM502236|pid:none) Leishmania infantum chromosome 18. 50 7e-05
CP000552_13(CP000552|pid:none) Prochlorococcus marinus str. MIT ... 50 7e-05
(Q5PPI1) RecName: Full=Splicing factor, arginine/serine-rich 9; ... 50 7e-05
BC162004_1(BC162004|pid:none) Rattus norvegicus Ewing sarcoma br... 50 7e-05
BC167360_1(BC167360|pid:none) Xenopus tropicalis RNA binding mot... 50 7e-05
AC144459_16(AC144459|pid:none) Medicago truncatula clone mth2-23... 50 7e-05
AJ421781_1(AJ421781|pid:none) Persea americana chloroplast mRNA ... 50 7e-05
BC153596_1(BC153596|pid:none) Danio rerio splicing factor, argin... 50 7e-05
AE017282_947(AE017282|pid:none) Methylococcus capsulatus str. Ba... 50 7e-05
AM920431_962(AM920431|pid:none) Penicillium chrysogenum Wisconsi... 50 7e-05
EU970526_1(EU970526|pid:none) Zea mays clone 346915 pre-mRNA-spl... 50 7e-05
(Q7SXP4) RecName: Full=Splicing factor, arginine/serine-rich 1-l... 50 7e-05
AP009178_278(AP009178|pid:none) Nitratiruptor sp. SB155-2 genomi... 50 7e-05
(A1DGS2) RecName: Full=Eukaryotic translation initiation factor ... 50 7e-05
AB041639_1(AB041639|pid:none) Bombyx mori EN86 mRNA for TIA-1 li... 50 7e-05
AE014297_4382(AE014297|pid:none) Drosophila melanogaster chromos... 50 7e-05
(B0XS28) RecName: Full=Eukaryotic translation initiation factor ... 50 7e-05
DQ235162_1(DQ235162|pid:none) Solanum tuberosum clone 153C04 unk... 50 7e-05
EF146013_1(EF146013|pid:none) Populus trichocarpa clone WS0114_O... 50 7e-05
AK294254_1(AK294254|pid:none) Homo sapiens cDNA FLJ56571 complet... 50 7e-05
BC043735_1(BC043735|pid:none) Xenopus laevis RNA-binding protein... 49 9e-05
CT005257_18(CT005257|pid:none) Leishmania major strain Friedlin,... 49 9e-05
AL032631_3(AL032631|pid:none) Caenorhabditis elegans YAC Y106G6H... 49 9e-05
FJ438505_1(FJ438505|pid:none) Epinephelus coioides hyperosmotic ... 49 9e-05
BC135736_1(BC135736|pid:none) Xenopus tropicalis hypothetical pr... 49 9e-05
BC099348_1(BC099348|pid:none) Xenopus laevis RNA-binding protein... 49 9e-05
AF042383_1(AF042383|pid:none) Mus musculus TLS-associated protei... 49 9e-05
AB168869_1(AB168869|pid:none) Macaca fascicularis testis cDNA, c... 49 9e-05
CU633897_96(CU633897|pid:none) Podospora anserina genomic DNA ch... 49 9e-05
EU500865_1(EU500865|pid:none) Cucumis sativus clone CS_SBa_173I2... 49 9e-05
BT025832_1(BT025832|pid:none) Drosophila melanogaster IP09238 fu... 49 9e-05
AL590609_7(AL590609|pid:none) Human DNA sequence from clone RP11... 49 9e-05
(Q6AYL5) RecName: Full=Splicing factor 3B subunit 4; &(Q8QZY9) ... 49 9e-05
AF034741_1(AF034741|pid:none) Macropus eugenii heterogeneous nuc... 49 9e-05
BC056532_1(BC056532|pid:none) Danio rerio splicing factor 3b, su... 49 9e-05
AL032631_5(AL032631|pid:none) Caenorhabditis elegans YAC Y106G6H... 49 9e-05
CT005257_17(CT005257|pid:none) Leishmania major strain Friedlin,... 49 9e-05
CP000492_2580(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 49 9e-05
BC098831_1(BC098831|pid:none) Rattus norvegicus FUS interacting ... 49 9e-05
AY099515_1(AY099515|pid:none) Danio rerio splicing factor 3b sub... 49 9e-05
AJ237847_1(AJ237847|pid:none) Mus musculus mRNA for heterogeneou... 49 9e-05
AF419332_1(AF419332|pid:none) Homo sapiens TLS-associated protei... 49 9e-05
AK135316_1(AK135316|pid:none) Mus musculus 12 days embryo male w... 49 9e-05
AK134289_1(AK134289|pid:none) Mus musculus 13 days embryo foreli... 49 9e-05
(Q05AT9) RecName: Full=U11/U12 small nuclear ribonucleoprotein 3... 49 9e-05
AF176675_1(AF176675|pid:none) Gallus gallus RNA-binding protein ... 49 9e-05
AP007151_960(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 49 9e-05
(Q96G09) RecName: Full=FUS-interacting serine-arginine-rich prot... 49 9e-05
AB172411_1(AB172411|pid:none) Macaca fascicularis brain cDNA clo... 49 9e-05
BT065814_1(BT065814|pid:none) Zea mays full-length cDNA clone ZM... 49 9e-05
BC046695_1(BC046695|pid:none) Xenopus laevis similar to FUS inte... 49 9e-05
S41766(S41766;S43202)heterogeneous nuclear ribonucleoprotein G -... 49 9e-05
DQ120650_1(DQ120650|pid:none) Homo sapiens RBM1 gene, partial cds. 49 9e-05
AM920430_123(AM920430|pid:none) Penicillium chrysogenum Wisconsi... 49 9e-05
FN392319_768(FN392319|pid:none) Pichia pastoris GS115 chromosome... 49 9e-05
BC045264_1(BC045264|pid:none) Xenopus laevis splicing factor 3b,... 49 9e-05
BC091794_1(BC091794|pid:none) Danio rerio RNA binding motif prot... 49 9e-05
AJ719320_1(AJ719320|pid:none) Gallus gallus mRNA for hypothetica... 49 9e-05
AJ237846_1(AJ237846|pid:none) Mus musculus mRNA for heterogeneou... 49 9e-05
(A5A6M3) RecName: Full=Heterogeneous nuclear ribonucleoprotein G... 49 9e-05
AE014298_1908(AE014298|pid:none) Drosophila melanogaster chromos... 49 9e-05
A39293(A39293;I56229)cytotoxic granule-associated RNA-binding pr... 49 9e-05
AK296175_1(AK296175|pid:none) Homo sapiens cDNA FLJ58902 complet... 49 9e-05
>DQ286856_1(DQ286856|pid:none) Taiwania cryptomerioides Y14 protein
mRNA, complete cds.
Length = 216
Score = 132 bits (333), Expect = 6e-30
Identities = 69/131 (52%), Positives = 89/131 (67%)
Frame = +3
Query: 186 PSKIKGRGANNSDSMDIDSSERYSGKGGEFHSLNDDGGDKVGEPLKSIEGWIIFVRNIQE 365
P K KGRG + D + + R++ + +F SLN DGG P +SIEGWII V + E
Sbjct: 67 PKKTKGRGFR--EETDFERNTRFTAR--DFDSLNSDGGPG---PQRSIEGWIILVTGVHE 119
Query: 366 EVQEPDLMDIFAEYGQIKNIHLNIDRRTGFTKGYALIEYEKRSEAEDAIKNGSGYELAGL 545
E QE DL ++F E+G+IKN+HLN+DRRTGF KGYALIEYE +EA+ AI+N +G EL
Sbjct: 120 EAQEVDLQELFGEHGEIKNLHLNLDRRTGFVKGYALIEYETFNEAQAAIENLNGAELLTQ 179
Query: 546 KLSVDWAFITG 578
+SVDWAF G
Sbjct: 180 TISVDWAFSNG 190
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 694,210,201
Number of extensions: 12950018
Number of successful extensions: 43359
Number of sequences better than 10.0: 2851
Number of HSP's gapped: 43044
Number of HSP's successfully gapped: 3378
Length of query: 212
Length of database: 1,040,966,779
Length adjustment: 123
Effective length of query: 89
Effective length of database: 646,839,724
Effective search space: 57568735436
Effective search space used: 57568735436
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)
|
| PSORT |
|
| VS (DIR, S) |
1 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |