Contig-U06475-1
Contig ID Contig-U06475-1
Contig update 2001. 8.30
Contig sequence
>Contig-U06475-1 (Contig-U06475-1Q) /CSM_Contig/Contig-U06475-1Q.Seq.d
TTGGCATCATCTTGGTTTAAGAAAGGCAACCGCGGGTTTATTCTTTCAAA
AGTTTTTTTTCCCAAAATTTGGTAAACCCGAATTTGAAGATTTGGTAAAA
GNTGCCGAATTAAATTTTCCAAGGGCATTCAAAGGGATTGAATCAATATT
TTTGGCAAATGGTAATAATAATTATTTAATTGGTGATCAAGTTACAATCG
CTGATTTTTCATGTTATTGTGAAATTAATCAATTGGAAGCCTTAAATTTT
GATTTCAAACCTTTTCCAATCCTTACAAATTGGNTGGAAAGAATGAAACA
ATTTAATGGTTTTGGGGAATCTCATAAAATTTTTCATAAAATTGCTTCCC
AATCAAGATTTTAAATTAATAAAATAATAAAAAAAAAAAAAAAAGAAAAA
TTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

Gap no gap
Contig length 462
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 708328
End point 708730
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U06475
List of clone(s)

est1=VSC655Z,1,463
Translated Amino Acid sequence
WHHLGLRKATAGLFFQKFFFPKFGKPEFEDLVKXAELNFPRAFKGIESIFLANGNNNYLI
GDQVTIADFSCYCEINQLEALNFDFKPFPILTNWXERMKQFNGFGESHKIFHKIASQSRF
*inkiikkkkkekflkkkkkkkkkkkkkkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
lasswfkkgnrgfilskvffpkiw*tri*rfgkxcrikfskgiqrd*inifgkw***lfn
w*ssynr*ffmll*n*sigslkf*fqtfsnpyklxgkneti*wfwgis*nfs*ncfpiki
ln**nnkkkkkrkifkkkkkkkkkkkkkkkkkkk


Frame B:
WHHLGLRKATAGLFFQKFFFPKFGKPEFEDLVKXAELNFPRAFKGIESIFLANGNNNYLI
GDQVTIADFSCYCEINQLEALNFDFKPFPILTNWXERMKQFNGFGESHKIFHKIASQSRF
*inkiikkkkkekflkkkkkkkkkkkkkkkkkk


Frame C:
giilv*erqprvysfksffsqnlvnpnlkiw*kxpn*ifqghskglnqyfwqmviiii*l
viklqslifhvivklinwkp*ilisnlfqslqigwke*nnlmvlgnlikffikllpnqdf
klik**kkkkkknf*kkkkkkkkkkkkkkkkkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U06475-1 (Contig-U06475-1Q)
/CSM_Contig/Contig-U06475-1Q.Seq.d
(462 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U06475-1 (Contig-U06475-1Q) /CSM_Contig/Conti... 690 0.0
Contig-U10418-1 (Contig-U10418-1Q) /CSM_Contig/Conti... 52 5e-07
Contig-U12123-1 (Contig-U12123-1Q) /CSM_Contig/Conti... 36 0.032
Contig-U08202-1 (Contig-U08202-1Q) /CSM_Contig/Conti... 36 0.032
Contig-U01385-1 (Contig-U01385-1Q) /CSM_Contig/Conti... 36 0.032
Contig-U14028-1 (Contig-U14028-1Q) /CSM_Contig/Conti... 34 0.13
Contig-U13974-1 (Contig-U13974-1Q) /CSM_Contig/Conti... 34 0.13
Contig-U13827-1 (Contig-U13827-1Q) /CSM_Contig/Conti... 34 0.13
Contig-U13247-1 (Contig-U13247-1Q) /CSM_Contig/Conti... 34 0.13
Contig-U11779-1 (Contig-U11779-1Q) /CSM_Contig/Conti... 34 0.13

>Contig-U06475-1 (Contig-U06475-1Q) /CSM_Contig/Contig-U06475-1Q.Seq.d
Length = 462

Score = 690 bits (348), Expect = 0.0
Identities = 370/378 (97%)
Strand = Plus / Plus


Query: 1 ttggcatcatcttggtttaagaaaggcaaccgcgggtttattctttcaaaagnnnnnnnn 60
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttggcatcatcttggtttaagaaaggcaaccgcgggtttattctttcaaaagtttttttt 60


Query: 61 cccaaaatttggtaaacccgaatttgaagatttggtaaaagntgccgaattaaattttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccaaaatttggtaaacccgaatttgaagatttggtaaaagntgccgaattaaattttcc 120


Query: 121 aagggcattcaaagggattgaatcaatatttttggcaaatggtaataataattatttaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagggcattcaaagggattgaatcaatatttttggcaaatggtaataataattatttaat 180


Query: 181 tggtgatcaagttacaatcgctgatttttcatgttattgtgaaattaatcaattggaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggtgatcaagttacaatcgctgatttttcatgttattgtgaaattaatcaattggaagc 240


Query: 241 cttaaattttgatttcaaaccttttccaatccttacaaattggntggaaagaatgaaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttaaattttgatttcaaaccttttccaatccttacaaattggntggaaagaatgaaaca 300


Query: 301 atttaatggttttggggaatctcataaaatttttcataaaattgcttcccaatcaagatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atttaatggttttggggaatctcataaaatttttcataaaattgcttcccaatcaagatt 360


Query: 361 ttaaattaataaaataat 378
||||||||||||||||||
Sbjct: 361 ttaaattaataaaataat 378


>Contig-U10418-1 (Contig-U10418-1Q) /CSM_Contig/Contig-U10418-1Q.Seq.d
Length = 748

Score = 52.0 bits (26), Expect = 5e-07
Identities = 41/46 (89%)
Strand = Plus / Plus


Query: 194 acaatcgctgatttttcatgttattgtgaaattaatcaattggaag 239
||||| ||||||||||||||||||| |||| |||| ||||| ||||
Sbjct: 535 acaattgctgatttttcatgttattctgaacttaaacaattagaag 580


>Contig-U12123-1 (Contig-U12123-1Q) /CSM_Contig/Contig-U12123-1Q.Seq.d
Length = 1410

Score = 36.2 bits (18), Expect = 0.032
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 163 taataataattatttaattggt 184
|||||||||| |||||||||||
Sbjct: 737 taataataataatttaattggt 758


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9962
Number of Sequences: 6905
Number of extensions: 9962
Number of successful extensions: 1260
Number of sequences better than 10.0: 395
length of query: 462
length of database: 5,674,871
effective HSP length: 16
effective length of query: 446
effective length of database: 5,564,391
effective search space: 2481718386
effective search space used: 2481718386
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2008.11. 8
Homology vs DNA
Query= Contig-U06475-1 (Contig-U06475-1Q) /CSM_Contig/Contig-U06475-1Q.Seq.d
(462 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU262701) Dictyostelium discoideum vegetative cDNA clone:VS... 509 e-165 2
(AU263261) Dictyostelium discoideum vegetative cDNA clone:VS... 52 0.001 2
(AU265485) Dictyostelium discoideum vegetative cDNA clone:VS... 52 0.002 2
(AU265423) Dictyostelium discoideum vegetative cDNA clone:VS... 52 0.002 2
(AU269973) Dictyostelium discoideum vegetative cDNA clone:VS... 52 0.002 2
(AU262301) Dictyostelium discoideum vegetative cDNA clone:VS... 52 0.002 2
(AU263428) Dictyostelium discoideum vegetative cDNA clone:VS... 52 0.002 2
(AU265422) Dictyostelium discoideum vegetative cDNA clone:VS... 52 0.002 2
(BJ432054) Dictyostelium discoideum cDNA clone:ddv17p11, 3' ... 52 0.002 2
(AU269972) Dictyostelium discoideum vegetative cDNA clone:VS... 52 0.002 2
(AU264755) Dictyostelium discoideum vegetative cDNA clone:VS... 52 0.002 2
(AZ933181) Gm_UMb001_061_M01R UMN Soybean BAC Library (pECSB... 48 0.28 1
(DB777213) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.28 1
(DB765940) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.28 1
(DB756171) Apis mellifera head cDNA, RIKEN full-length enric... 48 0.28 1
(Z33072) M.capricolum DNA for CONTIG MC097. 48 0.28 1
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 48 0.28 1
(BJ413939) Dictyostelium discoideum cDNA clone:ddv17p11, 5' ... 44 0.31 2
(AC025153) Homo sapiens chromosome 12 clone RP11-289I2, WORK... 32 0.58 2
(AC024897) Homo sapiens 3 BAC RP11-505J9 (Roswell Park Cance... 32 0.59 2
(CR855304) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 0.98 3
(AC157273) Rhinolophus ferrumequinum clone VMRC7-55E17, WORK... 46 1.1 1
(CB097850) ku45h07.y1 Strongyloides ratti PA female naive pA... 46 1.1 1
(CB097505) ku41e12.y1 Strongyloides ratti PA female naive pA... 46 1.1 1
(BM168009) EST570532 PyBS Plasmodium yoelii yoelii cDNA clon... 46 1.1 1
(BI073649) kt33c05.y1 Strongyloides ratti L2 pAMP1 v1 Chiape... 46 1.1 1
(EY303276) CAWX16622.rev CAWX Helobdella robusta Primary Ear... 38 1.6 2
(CT025155) Mouse DNA sequence from clone RP23-228F18 on chro... 44 4.3 1
(AL731555) Human DNA sequence from clone RP11-157J13 on chro... 44 4.3 1
(AC087586) Homo sapiens chromosome 12 clone RP11-544L1, WORK... 44 4.3 1
(AC010199) Homo sapiens clone RP11-587P7, WORKING DRAFT SEQU... 44 4.3 1
(AQ392000) CITBI-E1-2553A14.TR CITBI-E1 Homo sapiens genomic... 44 4.3 1
(FH473863) CHO_OF4986xn03f1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 4.3 1
(ER745288) SB_BBc131-O03.R SB_BBc Sorghum bicolor genomic 3'... 44 4.3 1
(ER526545) 1093015674052 Global-Ocean-Sampling_GS-35-01-01-1... 44 4.3 1
(EK241757) 1095460228171 Global-Ocean-Sampling_GS-31-01-01-1... 44 4.3 1
(CW192294) 104_614_11178947_148_36948_038 Sorghum methylatio... 44 4.3 1
(CW171541) 104_582_11155799_116_36525_090 Sorghum methylatio... 44 4.3 1
(CW155224) 104_557_11146022_148_36361_053 Sorghum methylatio... 44 4.3 1
(BM559988) AGENCOURT_6564041 NIH_MGC_119 Homo sapiens cDNA c... 44 4.3 1
(AC230064) Bos taurus clone CH240-523H3, WORKING DRAFT SEQUE... 38 4.6 2
(DV742938) ID0AFF8CB01CM1 ID0AFF Acyrthosiphon pisum cDNA cl... 34 4.7 2
(DX030293) KBrB026M05R KBrB, Brassica rapa BamHI BAC library... 36 5.2 2
(FF327433) 280432751 Pea aphid whole body normalized full le... 34 5.5 2
(CN752350) ApHL3SD-XXXI-C12 ApHL3SD Acyrthosiphon pisum cDNA... 34 5.7 2
(FF316221) 280376984 Pea aphid whole body normalized full le... 34 5.7 2
(EX630185) 255469380 Pea aphid whole body normalized full le... 34 5.9 2
(FF312144) 279383479 Pea aphid whole body normalized full le... 34 6.0 2
(EX619452) 255408925 Pea aphid whole body normalized full le... 34 6.0 2
(CZ650387) OM__Ba0199A19.f OM__Ba Oryza minuta genomic clone... 36 6.3 2
(AC094980) Rattus norvegicus clone CH230-6A22, *** SEQUENCIN... 30 7.7 2
(AC139980) Rattus norvegicus clone CH230-309G11, WORKING DRA... 30 7.8 2
(AC141015) Rattus norvegicus clone CH230-200E8, *** SEQUENCI... 30 7.8 2
(CC302744) CH261-61B18_Sp6.1 CH261 Gallus gallus genomic clo... 30 9.4 3
(AM450470) Vitis vinifera contig VV78X271720.1, whole genome... 32 9.6 2

>(AU262701) Dictyostelium discoideum vegetative cDNA clone:VSC655,
3' end single read.
Length = 463

Score = 509 bits (257), Expect(2) = e-165
Identities = 263/263 (100%)
Strand = Plus / Plus


Query: 61 cccaaaatttggtaaacccgaatttgaagatttggtaaaagntgccgaattaaattttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cccaaaatttggtaaacccgaatttgaagatttggtaaaagntgccgaattaaattttcc 120


Query: 121 aagggcattcaaagggattgaatcaatatttttggcaaatggtaataataattatttaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagggcattcaaagggattgaatcaatatttttggcaaatggtaataataattatttaat 180


Query: 181 tggtgatcaagttacaatcgctgatttttcatgttattgtgaaattaatcaattggaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggtgatcaagttacaatcgctgatttttcatgttattgtgaaattaatcaattggaagc 240


Query: 241 cttaaattttgatttcaaaccttttccaatccttacaaattggntggaaagaatgaaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cttaaattttgatttcaaaccttttccaatccttacaaattggntggaaagaatgaaaca 300


Query: 301 atttaatggttttggggaatctc 323
|||||||||||||||||||||||
Sbjct: 301 atttaatggttttggggaatctc 323

Score = 103 bits (52), Expect(2) = e-165
Identities = 52/52 (100%)
Strand = Plus / Plus


Query: 1 ttggcatcatcttggtttaagaaaggcaaccgcgggtttattctttcaaaag 52
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttggcatcatcttggtttaagaaaggcaaccgcgggtttattctttcaaaag 52

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 407,576,603
Number of extensions: 25330892
Number of successful extensions: 2036486
Number of sequences better than 10.0: 55
Length of query: 462
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 439
Effective length of database: 93,106,754,628
Effective search space: 40873865281692
Effective search space used: 40873865281692
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 6.21
Homology vs Protein
Query= Contig-U06475-1 (Contig-U06475-1Q) /CSM_Contig/Contig-U06475-1Q.Seq.d
(462 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AF402793_1(AF402793|pid:none) Oryza sativa (japonica cultivar-gr... 49 5e-05
FJ851372_1(FJ851372|pid:none) Chironomus tentans glutathione S-t... 45 6e-04
AC151526_23(AC151526|pid:none) Medicago truncatula clone mth2-78... 45 6e-04
AF243378_1(AF243378|pid:none) Glycine max glutathione S-transfer... 44 0.001
AY255857_1(AY255857|pid:none) Anopheles gambiae glutathione tran... 43 0.003
EU079404_1(EU079404|pid:none) Drosophila mojavensis strain DE18 ... 43 0.004
AF133268_1(AF133268|pid:none) Manduca sexta glutathione S-transf... 43 0.004
EU079406_1(EU079406|pid:none) Drosophila mojavensis strain HE01 ... 43 0.004
EU079421_1(EU079421|pid:none) Drosophila mojavensis strain MJ68 ... 43 0.004
EU079432_1(EU079432|pid:none) Drosophila mojavensis strain MJBC1... 42 0.007
AF425746_1(AF425746|pid:none) Emericella nidulans theta class gl... 42 0.007
AE013599_921(AE013599|pid:none) Drosophila melanogaster chromoso... 42 0.007
EU079426_1(EU079426|pid:none) Drosophila mojavensis strain MJBC1... 42 0.009
EU079431_1(EU079431|pid:none) Drosophila mojavensis strain MJBC1... 42 0.009
CP001172_17(CP001172|pid:none) Acinetobacter baumannii AB307-029... 42 0.009
CU459141_15(CU459141|pid:none) Acinetobacter baumannii str. AYE,... 42 0.009
EU747062_1(EU747062|pid:none) Tigriopus japonicus glutathione S-... 41 0.015
CU234118_5658(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 41 0.015
AC151526_24(AC151526|pid:none) Medicago truncatula clone mth2-78... 41 0.015
CP000863_3658(CP000863|pid:none) Acinetobacter baumannii ACICU, ... 40 0.019
AP008217_1186(AP008217|pid:none) Oryza sativa (japonica cultivar... 40 0.019
CP000521_3787(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 40 0.019
(P28338) RecName: Full=Glutathione S-transferase 1; EC=... 40 0.025
EU079405_1(EU079405|pid:none) Drosophila mojavensis strain DE22 ... 40 0.033
CU633750_588(CU633750|pid:none) Cupriavidus taiwanensis str. LMG... 40 0.033
BT012465_1(BT012465|pid:none) Drosophila melanogaster RE40740 fu... 40 0.033
CP001103_4050(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 40 0.033
AE014297_577(AE014297|pid:none) Drosophila melanogaster chromoso... 40 0.033
AB019225_1(AB019225|pid:none) Arabidopsis thaliana genomic DNA, ... 40 0.033
AM270014_26(AM270014|pid:none) Aspergillus niger contig An02c019... 39 0.043
AP007155_549(AP007155|pid:none) Aspergillus oryzae RIB40 genomic... 39 0.043
CP000155_3158(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 39 0.043
CR543861_15(CR543861|pid:none) Acinetobacter sp. ADP1 complete g... 39 0.056
DQ355375_1(DQ355375|pid:none) Bombyx mori glutathione S-transfer... 39 0.056
BT024431_1(BT024431|pid:none) Drosophila melanogaster IP02541 fu... 39 0.056
C46681(C46681)glutathione transferase (EC 2.5.1.18) D24 - fruit ... 39 0.056
BX572606_321(BX572606|pid:none) Rhodopseudomonas palustris CGA00... 39 0.056
CP000240_1238(CP000240|pid:none) Synechococcus sp. JA-2-3B'a(2-1... 39 0.056
AF515525_1(AF515525|pid:none) Anopheles gambiae glutathione S-tr... 39 0.056
CP001096_4737(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 39 0.056
AB2377(AB2377) glutathione S-transferase [imported] - Nostoc sp.... 39 0.073
U87958_1(U87958|pid:none) Culicoides variipennis glutathione S t... 39 0.073
JQ1378(JQ1378;F46681)glutathione transferase (EC 2.5.1.18) D27 -... 38 0.095
EU079447_1(EU079447|pid:none) Drosophila arizonae strain ARNA22 ... 38 0.095
EU079381_1(EU079381|pid:none) Drosophila mojavensis strain ANZA1... 38 0.095
BT047481_1(BT047481|pid:none) Salmo salar clone ssal-rgb2-501-18... 38 0.095
EU079444_1(EU079444|pid:none) Drosophila navojoa strain NAV10 gl... 38 0.095
BT050013_1(BT050013|pid:none) Salmo salar clone ssal-sjb-020-248... 38 0.095
BT046669_1(BT046669|pid:none) Salmo salar clone ssal-evf-501-021... 38 0.095
CP000777_287(CP000777|pid:none) Leptospira biflexa serovar Patoc... 38 0.095
AM260480_755(AM260480|pid:none) Ralstonia eutropha H16 chromosom... 38 0.095
EU079443_1(EU079443|pid:none) Drosophila navojoa strain NAV1 glu... 38 0.095
AF147206_1(AF147206|pid:none) Musca domestica glutathione s-tran... 38 0.095
AY819710_1(AY819710|pid:none) Aedes aegypti glutathione S-transf... 38 0.095
EU079461_1(EU079461|pid:none) Drosophila arizonae strain CHI13 g... 38 0.095
AE005674_2378(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 38 0.12
AY731241_1(AY731241|pid:none) Aspergillus fumigatus theta class ... 38 0.12
EF107101_3(EF107101|pid:none) Uncultured marine bacterium HF10_0... 38 0.12
AE013599_2845(AE013599|pid:none) Drosophila melanogaster chromos... 38 0.12
BT029414_1(BT029414|pid:none) Drosophila melanogaster IP02537 fu... 38 0.12
AF061253_1(AF061253|pid:none) Botryotinia fuckeliana glutathione... 38 0.12
CT573326_1207(CT573326|pid:none) Pseudomonas entomophila str. L4... 38 0.12
CP000266_2191(CP000266|pid:none) Shigella flexneri 5 str. 8401, ... 38 0.12
AY770045_1(AY770045|pid:none) Aspergillus fumigatus glutathione ... 38 0.12
AE013599_2847(AE013599|pid:none) Drosophila melanogaster chromos... 37 0.16
AF336288_1(AF336288|pid:none) Galleria mellonella glutathione-S-... 37 0.16
AY231871_1(AY231871|pid:none) Drosophila yakuba clone yak-em_CG1... 37 0.16
AB443867_4(AB443867|pid:none) Culex quinquefasciatus CqGSTd1 gen... 37 0.16
CR382127_209(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 37 0.16
AL807366_5(AL807366|pid:none) Neurospora crassa DNA linkage grou... 37 0.16
AB176691_1(AB176691|pid:none) Bombyx mori GST delta mRNA for glu... 37 0.21
AE013599_2842(AE013599|pid:none) Drosophila melanogaster chromos... 37 0.21
AF386788_1(AF386788|pid:none) Drosophila simulans glutathione S-... 37 0.21
CP000283_3908(CP000283|pid:none) Rhodopseudomonas palustris BisB... 37 0.21
(P67804) RecName: Full=Glutathione S-transferase 1-1; E... 37 0.21
AE013599_2841(AE013599|pid:none) Drosophila melanogaster chromos... 37 0.21
U48419_1(U48419|pid:none) Mus musculus theta class glutathione t... 37 0.21
AE013599_2843(AE013599|pid:none) Drosophila melanogaster chromos... 37 0.21
(Q93113) RecName: Full=Glutathione S-transferase 1, isoform D; ... 37 0.21
DQ355374_1(DQ355374|pid:none) Bombyx mori glutathione S-transfer... 37 0.28
EF107106_11(EF107106|pid:none) Uncultured marine bacterium HF130... 37 0.28
AF053545_1(AF053545|pid:none) Homo sapiens glutathione transfera... 37 0.28
CP000949_1179(CP000949|pid:none) Pseudomonas putida W619, comple... 37 0.28
AF513636_1(AF513636|pid:none) Anopheles gambiae glutathione S-tr... 37 0.28
AK315154_1(AK315154|pid:none) Homo sapiens cDNA, FLJ96127, highl... 37 0.28
(Q9VHD3) RecName: Full=Probable maleylacetoacetate isomerase 1; ... 37 0.28
AP008981_1245(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 37 0.28
AC007954_4(AC007954|pid:none) Homo sapiens chromosome 14 clone R... 37 0.28
EF370473_1(EF370473|pid:none) Choristoneura fumiferana glutathio... 37 0.28
(P27012) RecName: Full=S-crystallin 4; AltName: Full=OL4; &D416... 37 0.28
AB209360_1(AB209360|pid:none) Homo sapiens mRNA for Glutathione ... 37 0.28
AE017349_437(AE017349|pid:none) Cryptococcus neoformans var. neo... 37 0.28
AY070932_1(AY070932|pid:none) Drosophila melanogaster RE03226 fu... 36 0.36
CP000117_2472(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 36 0.36
CP000739_542(CP000739|pid:none) Sinorhizobium medicae WSM419 pla... 36 0.36
CT573326_1388(CT573326|pid:none) Pseudomonas entomophila str. L4... 36 0.36
(Q18938) RecName: Full=Probable maleylacetoacetate isomerase; ... 36 0.36
AY058242_1(AY058242|pid:none) Helicoverpa armigera glutathione-S... 36 0.36
(P27014) RecName: Full=S-crystallin 2; &S56759(S56759;S56761;S2... 36 0.36
AJ132398_1(AJ132398|pid:none) Arabidopsis thaliana mRNA for glut... 36 0.36
BA000040_7418(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 36 0.36
BT032646_1(BT032646|pid:none) Drosophila melanogaster FI02803 fu... 36 0.36
AY139996_1(AY139996|pid:none) Arabidopsis thaliana glutathione t... 36 0.36
(P30108) RecName: Full=Glutathione S-transferase 1-1; E... 36 0.36
AY231942_1(AY231942|pid:none) Drosophila yakuba clone yak-em_Gst... 36 0.36
CP000133_1260(CP000133|pid:none) Rhizobium etli CFN 42, complete... 36 0.36
AM494475_1589(AM494475|pid:none) Orientia tsutsugamushi Boryong ... 36 0.47
BT045831_1(BT045831|pid:none) Salmo salar clone ssal-rgf-532-350... 36 0.47
CR382136_812(CR382136|pid:none) Debaryomyces hansenii strain CBS... 36 0.47
CR456929_1(CR456929|pid:none) Homo sapiens full open reading fra... 36 0.47
BT030973_1(BT030973|pid:none) Drosophila melanogaster IP20147 fu... 36 0.47
CP000157_2638(CP000157|pid:none) Erythrobacter litoralis HTCC259... 36 0.47
S51566(S51566;S42468)glutathione transferase (EC 2.5.1.18) 2 - h... 36 0.47
(Q9VG98) RecName: Full=Glutathione S-transferase D2; Sh... 36 0.47
EF104259_1(EF104259|pid:none) Macaca fascicularis glutathione tr... 36 0.47
AY231720_1(AY231720|pid:none) Drosophila yakuba clone yak-em_CG1... 36 0.47
AE014297_1540(AE014297|pid:none) Drosophila melanogaster chromos... 36 0.47
AY121705_1(AY121705|pid:none) Drosophila melanogaster RH47312 fu... 36 0.47
CP000117_3872(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 36 0.47
D46681(D46681)glutathione transferase (EC 2.5.1.18) D21 - fruit ... 36 0.47
AJ132355_1(AJ132355|pid:none) Polymyxa betae mRNA for glutathion... 36 0.47
AE014297_1539(AE014297|pid:none) Drosophila melanogaster chromos... 36 0.47
(P20432) RecName: Full=Glutathione S-transferase 1-1; E... 36 0.47
(P30104) RecName: Full=Glutathione S-transferase 1-1; E... 36 0.47
AF448500_1(AF448500|pid:none) Nilaparvata lugens glutathione S-t... 35 0.62
(P27013) RecName: Full=S-crystallin 1; &S56758(S56758;S56760;A4... 35 0.62
(P77526) RecName: Full=Uncharacterized GST-like protein yfcG; &... 35 0.62
CP000038_2206(CP000038|pid:none) Shigella sonnei Ss046, complete... 35 0.62
BC129653_1(BC129653|pid:none) Xenopus laevis hypothetical protei... 35 0.62
CP000036_2168(CP000036|pid:none) Shigella boydii Sb227, complete... 35 0.62
CP000970_2385(CP000970|pid:none) Escherichia coli SMS-3-5, compl... 35 0.62
AE014075_2774(AE014075|pid:none) Escherichia coli CFT073, comple... 35 0.62
(P27009) RecName: Full=S-crystallin 1; AltName: Full=OL1; &A416... 35 0.62
AY829757_1(AY829757|pid:none) Lonomia obliqua hypothetical prote... 35 0.62
EF033109_1(EF033109|pid:none) Helicoverpa armigera glutathione S... 35 0.62
CP000319_1047(CP000319|pid:none) Nitrobacter hamburgensis X14, c... 35 0.80
CP000830_833(CP000830|pid:none) Dinoroseobacter shibae DFL 12, c... 35 0.80
CP000628_3132(CP000628|pid:none) Agrobacterium radiobacter K84 c... 35 0.80
EF423869_1(EF423869|pid:none) Bombyx mori glutathione S-transfer... 35 0.80
BT075091_1(BT075091|pid:none) Osmerus mordax clone omor-eva-510-... 35 0.80
AF316635_1(AF316635|pid:none) Anopheles gambiae glutathione S-tr... 35 0.80
U51165_3(U51165|pid:none) Cycloclasticus oligotrophus XYLX (XYLX... 35 0.80
EF506489_1(EF506489|pid:none) Bombyx mori glutathione S-transfer... 35 0.80
CP001191_901(CP001191|pid:none) Rhizobium leguminosarum bv. trif... 35 0.80
CU928158_810(CU928158|pid:none) Escherichia fergusonii ATCC 3546... 35 1.1
AF515527_1(AF515527|pid:none) Anopheles gambiae glutathione S-tr... 35 1.1
EF207961_1(EF207961|pid:none) Heliconius melpomene glutathione-S... 35 1.1
AB289455_1(AB289455|pid:none) Ascidia sydneiensis samea AsGST-II... 35 1.1
FN392320_521(FN392320|pid:none) Pichia pastoris GS115 chromosome... 35 1.1
CP000243_2543(CP000243|pid:none) Escherichia coli UTI89, complet... 35 1.1
FM992691_269(FM992691|pid:none) Candida dubliniensis CD36 chromo... 35 1.1
AE014298_1990(AE014298|pid:none) Drosophila melanogaster chromos... 35 1.1
CU640366_394(CU640366|pid:none) Podospora anserina genomic DNA c... 35 1.1
CP000926_1390(CP000926|pid:none) Pseudomonas putida GB-1, comple... 34 1.4
AE015451_1806(AE015451|pid:none) Pseudomonas putida KT2440 compl... 34 1.4
AY060732_1(AY060732|pid:none) Drosophila melanogaster GH17960 fu... 34 1.4
AP009384_3131(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 34 1.4
(P42860) RecName: Full=Glutathione S-transferase 1-1; E... 34 1.4
AE014297_967(AE014297|pid:none) Drosophila melanogaster chromoso... 34 1.4
L23126_1(L23126|pid:none) Lucilia cuprina glutathione S-transfer... 34 1.4
BC055612_1(BC055612|pid:none) Danio rerio zgc:66350, mRNA (cDNA ... 34 1.4
(Q9VHD2) RecName: Full=Probable maleylacetoacetate isomerase 2; ... 34 1.4
AY825937_1(AY825937|pid:none) Sarcoptes scabiei type hominis glu... 34 1.4
U78784_1(U78784|pid:none) Anopheles dirus glutathione S-transfer... 34 1.4
(O76483) RecName: Full=Glutathione S-transferase D7; EC... 34 1.4
AM236080_1358(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 34 1.4
CP000927_790(CP000927|pid:none) Caulobacter sp. K31, complete ge... 34 1.8
CP000158_50(CP000158|pid:none) Hyphomonas neptunium ATCC 15444, ... 34 1.8
AB194128_1(AB194128|pid:none) Danio rerio gstp2 mRNA for pi-clas... 34 1.8
AB456582_1(AB456582|pid:none) Bombyx mori mRNA for zeta-class gl... 34 1.8
CP000744_3575(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 34 1.8
AY730273_1(AY730273|pid:none) Anopheles culicifacies 720KH gluta... 34 1.8
AY819709_1(AY819709|pid:none) Aedes aegypti glutathione S-transf... 34 1.8
CP001052_1069(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 34 1.8
CP000444_2649(CP000444|pid:none) Shewanella sp. MR-7, complete g... 34 1.8
DQ443330_1(DQ443330|pid:none) Bombyx mori glutathione transferas... 34 1.8
(Q9VG94) RecName: Full=Glutathione S-transferase D6; Sh... 34 1.8
BC123200_1(BC123200|pid:none) Xenopus laevis hypothetical protei... 34 1.8
CP001196_3127(CP001196|pid:none) Oligotropha carboxidovorans OM5... 34 1.8
AY651884_1(AY651884|pid:none) Anopheles culicifacies glutathione... 34 1.8
EU216545_1(EU216545|pid:none) Bombyx mori glutathione S-transfer... 34 1.8
AF515523_1(AF515523|pid:none) Anopheles gambiae glutathione S-tr... 34 1.8
CP000446_2592(CP000446|pid:none) Shewanella sp. MR-4, complete g... 34 1.8
CP001074_1352(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 34 1.8
AB041613_1(AB041613|pid:none) Mus musculus brain cDNA, clone MNC... 33 2.3
AP007255_4311(AP007255|pid:none) Magnetospirillum magneticum AMB... 33 2.3
CP000271_2061(CP000271|pid:none) Burkholderia xenovorans LB400 c... 33 2.3
CP000628_395(CP000628|pid:none) Agrobacterium radiobacter K84 ch... 33 2.3
U19294_1(U19294|pid:none) Loligo opalescens clone Lops9 S-crysta... 33 2.3
BC056725_1(BC056725|pid:none) Danio rerio glutathione S-transfer... 33 2.3
CP000653_2826(CP000653|pid:none) Enterobacter sp. 638, complete ... 33 2.3
X94285_1(X94285|pid:none) M.domestica nf10 gene. 33 2.3
AJ006502_1(AJ006502|pid:none) Bombyx mori mRNA for glutathione S... 33 2.3
(Q9WVL0) RecName: Full=Maleylacetoacetate isomerase; Sh... 33 2.3
CU928163_2597(CU928163|pid:none) Escherichia coli UMN026 chromos... 33 2.3
(Q52828) RecName: Full=Protein gstA; &X89816_2(X89816|pid:none) 33 2.3
CP000613_3124(CP000613|pid:none) Rhodospirillum centenum SW, com... 33 2.3
CP001392_1669(CP001392|pid:none) Diaphorobacter sp. TPSY, comple... 33 2.3
CR382129_783(CR382129|pid:none) Yarrowia lipolytica strain CLIB1... 33 2.3
A95406(A95406) glutathione transferase (EC 2.5.1.18) Gst13 [impo... 33 3.1
CP000076_4302(CP000076|pid:none) Pseudomonas fluorescens Pf-5, c... 33 3.1
FJ360741_1(FJ360741|pid:none) Cydia pomonella glutathione S-tran... 33 3.1
AF515524_1(AF515524|pid:none) Anopheles gambiae glutathione S-tr... 33 3.1
CP000891_1510(CP000891|pid:none) Shewanella baltica OS195, compl... 33 3.1
AE016825_972(AE016825|pid:none) Chromobacterium violaceum ATCC 1... 33 3.1
CP000964_1423(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 33 3.1
CP000362_3695(CP000362|pid:none) Roseobacter denitrificans OCh 1... 33 3.1
EU747059_1(EU747059|pid:none) Tigriopus japonicus glutathione S-... 33 4.0
CP000647_2648(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 33 4.0
(P30713) RecName: Full=Glutathione S-transferase theta-2; ... 33 4.0
AE016853_1995(AE016853|pid:none) Pseudomonas syringae pv. tomato... 33 4.0
AY573189_1(AY573189|pid:none) Anopheles stephensi glutathione S-... 33 4.0
AY754335_1(AY754335|pid:none) Anopheles stephensi strain 2IK II ... 33 4.0
CP001252_2805(CP001252|pid:none) Shewanella baltica OS223, compl... 33 4.0
AF508179_1(AF508179|pid:none) Azospirillum brasilense putative g... 32 5.2
EF423557_1(EF423557|pid:none) Chondrus crispus glutathione S-tra... 32 5.2
AF147205_1(AF147205|pid:none) Musca domestica glutathione S-tran... 32 5.2
AE014296_1554(AE014296|pid:none) Drosophila melanogaster chromos... 32 5.2
CP000712_3837(CP000712|pid:none) Pseudomonas putida F1, complete... 32 5.2
CP000680_3202(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 32 5.2
BT075089_1(BT075089|pid:none) Osmerus mordax clone omor-rgc-519-... 32 5.2
CP000075_1841(CP000075|pid:none) Pseudomonas syringae pv. syring... 32 5.2
AB019225_3(AB019225|pid:none) Arabidopsis thaliana genomic DNA, ... 32 5.2
BC112582_1(BC112582|pid:none) Bos taurus glutathione transferase... 32 5.2
CP000494_5848(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 32 5.2
CP000781_3722(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 32 5.2
CP000753_1460(CP000753|pid:none) Shewanella baltica OS185, compl... 32 5.2
AE015927_983(AE015927|pid:none) Clostridium tetani E88, complete... 32 5.2
CP000282_3817(CP000282|pid:none) Saccharophagus degradans 2-40, ... 32 6.8
CP000783_876(CP000783|pid:none) Enterobacter sakazakii ATCC BAA-... 32 6.8
AY737542_1(AY737542|pid:none) Toxoptera citricida putative trans... 32 6.8
EF506487_1(EF506487|pid:none) Bombyx mori glutathione S-transfer... 32 6.8
CP000806_2953(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 32 6.8
CP000503_2677(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 32 6.8
AY070255_1(AY070255|pid:none) Anopheles gambiae glutathione S-tr... 32 6.8
CP000113_5971(CP000113|pid:none) Myxococcus xanthus DK 1622, com... 32 6.8
CP000806_1175(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 32 6.8
(P27011) RecName: Full=S-crystallin 3; AltName: Full=OL3; &C416... 32 6.8
DQ530213_1(DQ530213|pid:none) Haliotis discus discus glutathione... 32 6.8
CP000821_2920(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 32 8.9
(P18425) RecName: Full=S-crystallin SL20-1; AltName: Full=Major ... 32 8.9
EU216542_1(EU216542|pid:none) Bombyx mori glutathione S-transfer... 32 8.9
BC076690_1(BC076690|pid:none) Xenopus tropicalis glutathione S-t... 32 8.9
(Q9N4X8) RecName: Full=Glutathione S-transferase P 10; ... 32 8.9
BX571869_201(BX571869|pid:none) Photorhabdus luminescens subsp. ... 32 8.9
U19300_1(U19300|pid:none) Loligo opalescens clone Lops102 S-crys... 32 8.9
AY624555_1(AY624555|pid:none) Anopheles fluviatilis strain 666KH... 32 8.9
U19390_1(U19390|pid:none) Loligo opalescens clone Lops21 S-cryst... 32 8.9
AY754339_1(AY754339|pid:none) Anopheles fluviatilis strain 92IR ... 32 8.9
CR382132_1061(CR382132|pid:none) Yarrowia lipolytica strain CLIB... 32 8.9
CP000377_2244(CP000377|pid:none) Silicibacter sp. TM1040, comple... 32 8.9

>AF402793_1(AF402793|pid:none) Oryza sativa (japonica
cultivar-group) clone RICS4992A putative glutathione
S-transferase OsGSTT1 mRNA, complete cds.
&AK060166_1(AK060166|pid:none)
&AK104738_1(AK104738|pid:none)
&AP008217_1184(AP008217|pid:none)
Length = 246

Score = 48.9 bits (115), Expect = 5e-05
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Frame = +2

Query: 2 WHHLGLRKATAGLXXXXXXXXXXXXXXXXDLVKXAELNFPRAFKGIESIFLANGNNNYLI 181
WHH LR+ A K AE R+ IES++L GN +L+
Sbjct: 104 WHHSNLRRGAATFILNTVLAPSLGLPSSPQAAKEAEKVLFRSLGLIESMWL-KGNAKFLL 162

Query: 182 GD-QVTIADFSCYCEINQLEALNFDFK-----PFPILTNWXERMKQFNG--FGESHKIFH 337
G+ Q++IAD S CEI QLE L + P + +W + +K+ F E H++
Sbjct: 163 GNPQLSIADLSLVCEIMQLEVLGDSERDRILGPHEKIRSWVQNVKKATSPHFDEVHELIF 222

Query: 338 KI 343
K+
Sbjct: 223 KM 224

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 609,919,306
Number of extensions: 10259529
Number of successful extensions: 20684
Number of sequences better than 10.0: 251
Number of HSP's gapped: 20676
Number of HSP's successfully gapped: 252
Length of query: 154
Length of database: 1,040,966,779
Length adjustment: 116
Effective length of query: 38
Effective length of database: 669,269,719
Effective search space: 25432249322
Effective search space used: 25432249322
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)

PSORT

psg: 0.87 gvh: 0.39 alm: 0.47 top: 0.53 tms: 0.00 mit: 0.32 mip: 0.03
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.30 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: cytoplasmic
28.0 %: nuclear
16.0 %: mitochondrial
8.0 %: cytoskeletal
4.0 %: plasma membrane
4.0 %: peroxisomal
4.0 %: endoplasmic reticulum

>> prediction for Contig-U06475-1 is cyt

VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0