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Dicty_cDB
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U06413-1
Contig ID Contig-U06413-1
Contig update 2001. 8.30
Contig sequence 
>Contig-U06413-1 (Contig-U06413-1Q) /CSM_Contig/Contig-U06413-1Q.Seq.d
CCCGCGTCCGCAAGNATATAATTTTATATAGACCACAGAGAAAGAAAAAA
AAATAAAAAATGTCAACAACAGCATCAACATCATCAAATAATCTTACATT
TACATCAATTGTTAAATCATTTTTTGAGAGTTATTCAAAGACTCCACAAA
AATTAAAGATTATTGATCTTTTCCTTATATATACTTTCATTACTGGTGTA
ATTGTATTCACATATTGTTGTTTGGTTGGTACCTACCCATTCAATTCATT
TTTAGCTGCTTTCATTTCAACTGTTGGTTGTTTTGTTTTAACAGTATGTT
TAAGAATTCAAATTAATCCAATTAACAATTTTGGTAAAACCATTTCAATT
GAAAGAGCATTCACTGATTATCTTTTATGCAATTTAATTCTTCACCTTGT
TGTATTCAATTTCTTAGGTTAAAATTAAAAAAAAAAAATAAAAAAAAGAT
ATACAAATACCAATAAAAAAAGAATAAAAAAAAAAAAAGAATATATGTAT
TAAAAATAAAAAACAATAAACAAAAATAGGAATGGGATATTGTTAATTTA
AAAAAAAAA
Gap no gap
Contig length 559
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 4764699
End point 4764165
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 2
Link to clone list U06413
List of clone(s) 

est1=VSD314F,1,485
est2=VSB861E,16,560
Translated Amino Acid sequence 
rvrkxiilyrpqrkkkk*KMSTTASTSSNNLTFTSIVKSFFESYSKTPQKLKIIDLFLIY
TFITGVIVFTYCCLVGTYPFNSFLAAFISTVGCFVLTVCLRIQINPINNFGKTISIERAF
TDYLLCNLILHLVVFNFLG*n*kkkikkrytntnkkrikkkkeymy*k*ktinknrngil
li*kk
Translated Amino Acid sequence (All Frames) 
Frame A:
pasaxi*fyidhrerkknkkcqqqhqhhqiilhlhqllnhflrviqrlhkn*rllifsly
ilsllv*lyshivvwlvpthsihf*llsfqllvvlf*qyv*efkliqltilvkpfqlkeh
sliifyai*fftllysis*vkikkkk*kkdiqipikke*kkkkniciknkkq*tkigmgy
c*fkkk


Frame B:
prpqxynfi*ttekekkiknvnnsiniik*syiyinc*iif*elfkdstkikdy*sfpyi
yfhywcncihillfgwylpiqfifscfhfncwlfcfnsmfknsn*sn*qfw*nhfn*ksi
h*lsfmqfnsspcciqflrlklkkknkkkiykyq*kknkkkkriyvlkiknnkqk*ewdi
vnlkkk


Frame C:
rvrkxiilyrpqrkkkk*KMSTTASTSSNNLTFTSIVKSFFESYSKTPQKLKIIDLFLIY
TFITGVIVFTYCCLVGTYPFNSFLAAFISTVGCFVLTVCLRIQINPINNFGKTISIERAF
TDYLLCNLILHLVVFNFLG*n*kkkikkrytntnkkrikkkkeymy*k*ktinknrngil
li*kk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U06413-1 (Contig-U06413-1Q)
/CSM_Contig/Contig-U06413-1Q.Seq.d
         (559 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U06413-1 (Contig-U06413-1Q) /CSM_Contig/Conti...   726  0.0
Contig-U11931-1 (Contig-U11931-1Q) /CSM_Contig/Conti...    46  4e-05
Contig-U10647-1 (Contig-U10647-1Q) /CSM_Contig/Conti...    40  0.002
Contig-U08718-1 (Contig-U08718-1Q) /CSM_Contig/Conti...    40  0.002
Contig-U11579-1 (Contig-U11579-1Q) /CSM_Contig/Conti...    38  0.010
Contig-U05711-1 (Contig-U05711-1Q) /CSM_Contig/Conti...    38  0.010
Contig-U03129-1 (Contig-U03129-1Q) /CSM_Contig/Conti...    38  0.010
Contig-U14875-1 (Contig-U14875-1Q) /CSM_Contig/Conti...    36  0.039
Contig-U12094-1 (Contig-U12094-1Q) /CSM_Contig/Conti...    36  0.039
Contig-U11666-1 (Contig-U11666-1Q) /CSM_Contig/Conti...    36  0.039

>Contig-U06413-1 (Contig-U06413-1Q) /CSM_Contig/Contig-U06413-1Q.Seq.d
          Length = 559

 Score =  726 bits (366), Expect = 0.0
 Identities = 366/366 (100%)
 Strand = Plus / Plus

                                                                       
Query: 61  tgtcaacaacagcatcaacatcatcaaataatcttacatttacatcaattgttaaatcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgtcaacaacagcatcaacatcatcaaataatcttacatttacatcaattgttaaatcat 120

                                                                       
Query: 121 tttttgagagttattcaaagactccacaaaaattaaagattattgatcttttccttatat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttttgagagttattcaaagactccacaaaaattaaagattattgatcttttccttatat 180

                                                                       
Query: 181 atactttcattactggtgtaattgtattcacatattgttgtttggttggtacctacccat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atactttcattactggtgtaattgtattcacatattgttgtttggttggtacctacccat 240

                                                                       
Query: 241 tcaattcatttttagctgctttcatttcaactgttggttgttttgttttaacagtatgtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcaattcatttttagctgctttcatttcaactgttggttgttttgttttaacagtatgtt 300

                                                                       
Query: 301 taagaattcaaattaatccaattaacaattttggtaaaaccatttcaattgaaagagcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taagaattcaaattaatccaattaacaattttggtaaaaccatttcaattgaaagagcat 360

                                                                       
Query: 361 tcactgattatcttttatgcaatttaattcttcaccttgttgtattcaatttcttaggtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcactgattatcttttatgcaatttaattcttcaccttgttgtattcaatttcttaggtt 420

                 
Query: 421 aaaatt 426
           ||||||
Sbjct: 421 aaaatt 426


 Score = 81.8 bits (41), Expect = 7e-16
 Identities = 44/44 (100%)
 Strand = Plus / Plus

                                                      
Query: 1  cccgcgtccgcaagnatataattttatatagaccacagagaaag 44
          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  cccgcgtccgcaagnatataattttatatagaccacagagaaag 44


 Score = 46.1 bits (23), Expect = 4e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 527 taggaatgggatattgttaattt 549
           |||||||||||||||||||||||
Sbjct: 527 taggaatgggatattgttaattt 549


 Score = 34.2 bits (17), Expect = 0.15
 Identities = 17/17 (100%)
 Strand = Plus / Plus

                            
Query: 448 gatatacaaataccaat 464
           |||||||||||||||||
Sbjct: 448 gatatacaaataccaat 464


>Contig-U11931-1 (Contig-U11931-1Q) /CSM_Contig/Contig-U11931-1Q.Seq.d
          Length = 1531

 Score = 46.1 bits (23), Expect = 4e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 64  caacaacagcatcaacatcatca 86
           |||||||||||||||||||||||
Sbjct: 256 caacaacagcatcaacatcatca 278


>Contig-U10647-1 (Contig-U10647-1Q) /CSM_Contig/Contig-U10647-1Q.Seq.d
          Length = 559

 Score = 40.1 bits (20), Expect = 0.002
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 73  catcaacatcatcaaataat 92
           ||||||||||||||||||||
Sbjct: 315 catcaacatcatcaaataat 334


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8093
Number of Sequences: 6905
Number of extensions: 8093
Number of successful extensions: 1124
Number of sequences better than 10.0: 342
length of query: 559
length of database: 5,674,871
effective HSP length: 16
effective length of query: 543
effective length of database: 5,564,391
effective search space: 3021464313
effective search space used: 3021464313
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2008.11. 8
Homology vs DNA 
Query= Contig-U06413-1 (Contig-U06413-1Q) /CSM_Contig/Contig-U06413-1Q.Seq.d
         (559 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU263824) Dictyostelium discoideum vegetative cDNA clone:VS...   714   0.0    2
(AU262298) Dictyostelium discoideum vegetative cDNA clone:VS...   714   0.0    2
(AC105573) Rattus norvegicus clone CH230-233D10, *** SEQUENC...    42   0.014  2
(AC094909) Rattus norvegicus clone CH230-6I2, WORKING DRAFT ...    42   0.014  2
(AC110537) Mus musculus chromosome 5, clone RP23-44A4, compl...    36   0.053  2
(CA754615) BR030003000_PLATE_A09_65_068.ab1 OA Oryza sativa ...    38   0.069  2
(AC117062) Rattus norvegicus clone CH230-177D13, *** SEQUENC...    50   0.086  1
(AC106979) Rattus norvegicus clone CH230-205F12, WORKING DRA...    50   0.086  1
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    38   0.15   8
(AC124201) Mus musculus BAC clone RP23-329B24 from chromosom...    36   0.19   2
(AC144940) Mus musculus BAC clone RP23-429A10 from chromosom...    34   0.19   2
(AC138313) Mus musculus BAC clone RP23-243P9 from 9, complet...    34   0.19   2
(AC166359) Mus musculus BAC clone RP23-303I23 from chromosom...    34   0.19   2
(AC123832) Mus musculus BAC clone RP24-126O19 from chromosom...    34   0.20   2
(AC159097) Mus musculus chromosome 8, clone RP24-310O9, comp...    36   0.20   2
(AC114402) Homo sapiens chromosome 1 clone RP11-397P13, comp...    34   0.20   2
(AC125100) Mus musculus BAC clone RP24-206N14 from 9, comple...    34   0.20   2
(AC122539) Mus musculus BAC clone RP24-550H10 from chromosom...    34   0.20   2
(AC120841) Mus musculus chromosome 8, clone RP24-553L18, com...    36   0.20   2
(AK132410) Mus musculus 0 day neonate skin cDNA, RIKEN full-...    34   0.24   2
(CB183970) AGENCOURT_11380574 NIH_MGC_164 Mus musculus cDNA ...    34   0.25   2
(AZ980421) 2M0257O21F Mouse 10kb plasmid UUGC2M library Mus ...    34   0.25   2
(AZ703588) RPCI-23-226F8.TV RPCI-23 Mus musculus genomic clo...    34   0.25   2
(AZ341364) 1M0073N09R Mouse 10kb plasmid UUGC1M library Mus ...    34   0.26   2
(AY166868) Araneus ventricosus defender against apoptotic ce...    48   0.34   1
(DV774930) McClintock_45_H10.ab1 Homarus EST library project...    48   0.34   1
(EY496038) CBBP2673.rev CBBP Hirudo medicinalis hermaphrodit...    48   0.34   1
(EY493522) CBBP19513.fwd CBBP Hirudo medicinalis hermaphrodi...    48   0.34   1
(EY491706) CBBP18426.fwd CBBP Hirudo medicinalis hermaphrodi...    48   0.34   1
(EY491705) CBBP18426.rev CBBP Hirudo medicinalis hermaphrodi...    48   0.34   1
(EY490129) CBBP17464.fwd CBBP Hirudo medicinalis hermaphrodi...    48   0.34   1
(EY485788) CBBP14812.fwd CBBP Hirudo medicinalis hermaphrodi...    48   0.34   1
(EY485787) CBBP14812.rev CBBP Hirudo medicinalis hermaphrodi...    48   0.34   1
(CR376770) Zebrafish DNA sequence from clone DKEY-157L19 in ...    42   0.55   2
(AC094004) Rattus norvegicus clone CH230-147H19, WORKING DRA...    32   0.71   2
(AC130122) Rattus norvegicus clone CH230-201I14, *** SEQUENC...    34   0.71   2
(AC170196) Macaca mulatta clone CH250-420C15, WORKING DRAFT ...    32   0.71   2
(AC189176) Colobus guereza clone CH272-289N6, WORKING DRAFT ...    32   0.72   2
(AC135682) Rattus norvegicus clone CH230-268P4, WORKING DRAF...    32   0.72   2
(AC172244) Macaca mulatta clone CH250-486G16, WORKING DRAFT ...    32   0.72   2
(AC162723) Papio anubis clone RP41-251H11, WORKING DRAFT SEQ...    32   0.73   2
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117...    42   0.84   4
(EX810547) CBNA1508.rev CBNA Phycomyces blakesleeanus NRRL15...    34   0.94   2
(AC098447) Rattus norvegicus clone CH230-2I24, *** SEQUENCIN...    42   1.0    4
(CR388227) Zebrafish DNA sequence from clone DKEY-102E1 in l...    46   1.3    1
(AM489186) Vitis vinifera contig VV78X264254.9, whole genome...    46   1.3    1
(AM457092) Vitis vinifera contig VV78X034280.4, whole genome...    46   1.3    1
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643...    46   1.3    1
(EJ017107) 1095439018976 Global-Ocean-Sampling_GS-26-01-01-1...    46   1.3    1
(CU859966) A BAC library has been constructed from PN40024 g...    46   1.3    1
(EH014645) USDA-FP_187325 Lysiphlebus testaceipes adult whol...    46   1.3    1
(BJ424879) Dictyostelium discoideum cDNA clone:ddv53k23, 5' ...    46   1.3    1
(BJ370875) Dictyostelium discoideum cDNA clone:ddc55d23, 5' ...    46   1.3    1
(AC171134) Helobdella robusta clone CH306-1A5, complete sequ...    44   1.5    3
(AU216507) Caenorhabditis elegans cDNA clone:yk838g02 : 3' e...    36   2.3    2
(BJ153455) Caenorhabditis elegans cDNA clone:yk1319f02 : 3' ...    36   2.3    2
(AC096235) Rattus norvegicus clone CH230-37P3, *** SEQUENCIN...    32   2.5    2
(AC079512) Mus musculus clone RP23-293H9, WORKING DRAFT SEQU...    34   2.5    2
(AC094598) Rattus norvegicus clone CH230-4A14, WORKING DRAFT...    34   2.6    2
(AC115215) Rattus norvegicus clone CH230-97H12, WORKING DRAF...    34   2.6    2
(AC120964) Rattus norvegicus clone CH230-96J8, *** SEQUENCIN...    32   2.6    2
(AC160114) Mus musculus BAC clone RP24-70J8 from chromosome ...    34   2.6    2
(AC122390) Mus musculus BAC clone RP24-80O9 from chromosome ...    34   2.6    2
(CT009600) Mouse DNA sequence from clone RP23-76M10 on chrom...    32   2.6    2
(AC074305) Mus musculus chromosome 16 clone RP23-10I2, WORKI...    32   2.6    2
(AC166730) Bos taurus clone CH240-165A16, WORKING DRAFT SEQU...    34   2.6    2
(AL953853) Mouse DNA sequence from clone RP23-6M16 on chromo...    34   2.6    2
(AC156989) Mus musculus chromosome 1, clone RP23-379L2, comp...    34   2.6    2
(AC161037) Mus musculus chromosome 7, clone RP24-255H18, com...    34   2.6    2
(CU407041) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   2.6    2
(CU928809) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    32   2.6    2
(AC110496) Mus musculus chromosome 7, clone RP23-56P3, compl...    34   2.6    2
(CU013539) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    34   2.6    2
(CL041930) CH216-53K1_Sp6.1 CH216 Xenopus (Silurana) tropica...    40   3.3    2
(AP005553) Oryza sativa Japonica Group genomic DNA, chromoso...    34   3.7    4
(BJ345884) Dictyostelium discoideum cDNA clone:dda29k07, 3' ...    34   4.1    2
(AC212660) Solanum lycopersicum chromosome 7 clone C07SLm014...    38   4.3    2
(ER850959) POTJD47TR Solanum tuberosum RHPOTKEY BAC ends Sol...    40   4.7    2
(AC203546) Medicago truncatula clone mth2-70e3, WORKING DRAF...    42   4.9    4
(DH272360) Oryzias latipes Fosmid clone:GOLWFno604_l19, reve...    34   5.0    2
(AC140274) Mus musculus BAC clone RP23-455O6 from chromosome...    44   5.3    1
(AC131784) Mus musculus BAC clone RP24-391G14 from chromosom...    44   5.3    1
(AP009727) Lotus japonicus genomic DNA, clone: LjT13L04, TM1...    44   5.3    1
(AC145289) Medicago truncatula clone mth2-7g18, complete seq...    44   5.3    1
(AC098593) Homo sapiens BAC clone RP11-439K15 from 4, comple...    44   5.3    1
(AC041013) Homo sapiens chromosome 4 clone RP11-324B17 map 4...    44   5.3    1
(AC220836) Bos taurus clone CH240-343G22, WORKING DRAFT SEQU...    44   5.3    1
(AC176193) Strongylocentrotus purpuratus clone R3-3064A03, W...    44   5.3    1
(AC019352) Homo sapiens chromosome 12 clone RP11-439K15 map ...    44   5.3    1
(EK137278) 1095448007055 Global-Ocean-Sampling_GS-31-01-01-1...    44   5.3    1
(CW933077) EDCCG87TF A. castellanii, 6-8 kb library from tot...    44   5.3    1
(CW926513) EDCBG69TR A. castellanii, 6-8 kb library from tot...    44   5.3    1
(EH237580) JGI_ACAC19545.fwd ACAC Phakopsora pachyrhizi TW72...    44   5.3    1
(EY270741) BF01053B1H06.f1 Normalized subtracted keck librar...    44   5.3    1
(EY262986) BF01032B1F02.f1 Normalized subtracted keck librar...    44   5.3    1
(EY256588) BF01012B2F09.f1 Normalized subtracted keck librar...    44   5.3    1
(EX626105) 255438021 Pea aphid whole body normalized full le...    44   5.3    1
(CU207366) Gramella forsetii KT0803 complete circular genome.      44   5.3    1
(CP001130) Hydrogenobaculum sp. Y04AAS1, complete genome.          44   5.3    1
(DE067815) Oryzias latipes DNA, clone: ola1-164M04.R, genomi...    40   5.4    2

>(AU263824) Dictyostelium discoideum vegetative cDNA clone:VSD314,
           5' end single read.
          Length = 485

 Score =  714 bits (360), Expect(2) = 0.0
 Identities = 360/360 (100%)
 Strand = Plus / Plus


Query: 61  tgtcaacaacagcatcaacatcatcaaataatcttacatttacatcaattgttaaatcat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgtcaacaacagcatcaacatcatcaaataatcttacatttacatcaattgttaaatcat 120


Query: 121 tttttgagagttattcaaagactccacaaaaattaaagattattgatcttttccttatat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttttgagagttattcaaagactccacaaaaattaaagattattgatcttttccttatat 180


Query: 181 atactttcattactggtgtaattgtattcacatattgttgtttggttggtacctacccat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atactttcattactggtgtaattgtattcacatattgttgtttggttggtacctacccat 240


Query: 241 tcaattcatttttagctgctttcatttcaactgttggttgttttgttttaacagtatgtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcaattcatttttagctgctttcatttcaactgttggttgttttgttttaacagtatgtt 300


Query: 301 taagaattcaaattaatccaattaacaattttggtaaaaccatttcaattgaaagagcat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taagaattcaaattaatccaattaacaattttggtaaaaccatttcaattgaaagagcat 360


Query: 361 tcactgattatcttttatgcaatttaattcttcaccttgttgtattcaatttcttaggtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcactgattatcttttatgcaatttaattcttcaccttgttgtattcaatttcttaggtt 420

 Score = 81.8 bits (41), Expect(2) = 0.0
 Identities = 44/44 (100%)
 Strand = Plus / Plus


Query: 1  cccgcgtccgcaagnatataattttatatagaccacagagaaag 44
          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  cccgcgtccgcaagnatataattttatatagaccacagagaaag 44

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 576,829,852
Number of extensions: 39082686
Number of successful extensions: 3351333
Number of sequences better than 10.0: 115
Length of query: 559
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 536
Effective length of database: 93,106,754,628
Effective search space: 49905220480608
Effective search space used: 49905220480608
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 6.21
Homology vs Protein 
Query= Contig-U06413-1 (Contig-U06413-1Q) /CSM_Contig/Contig-U06413-1Q.Seq.d
         (559 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54FB6) RecName: Full=Dolichyl-diphosphooligosaccharide--protei...   213   4e-54
EU188857_1(EU188857|pid:none) Mayetiola destructor defender agai...   132   6e-30
AY423354_1(AY423354|pid:none) Anopheles gambiae defender against...   129   7e-29
EF581986_1(EF581986|pid:none) Penaeus monodon defender against a...   127   1e-28
(Q9VLM5) RecName: Full=Dolichyl-diphosphooligosaccharide--protei...   127   3e-28
EF070541_1(EF070541|pid:none) Maconellicoccus hirsutus clone WHM...   126   4e-28
(P46967) RecName: Full=Dolichyl-diphosphooligosaccharide--protei...   126   4e-28
(Q29036) RecName: Full=Dolichyl-diphosphooligosaccharide--protei...   124   2e-27
BT046214_1(BT046214|pid:none) Salmo salar clone ssal-evd-564-108...   123   3e-27
BT048111_1(BT048111|pid:none) Salmo salar clone ssal-evd-521-178...   123   3e-27
AJ632073_1(AJ632073|pid:none) Suberites domuncula mRNA for defen...   123   4e-27
DQ440041_1(DQ440041|pid:none) Aedes aegypti clone AE-285 defende...   123   4e-27
DQ421417_1(DQ421417|pid:none) Epinephelus awoara defender agains...   123   4e-27
U81051_1(U81051|pid:none) Mus musculus Defender against Apoptoti...   122   5e-27
AK223129_1(AK223129|pid:none) Homo sapiens mRNA for defender aga...   121   1e-26
BT073429_1(BT073429|pid:none) Oncorhynchus mykiss clone omyk-evn...   121   1e-26
FN357330_30(FN357330|pid:none) Schistosoma mansoni genome sequen...   120   2e-26
AX887884_1(AX887884|pid:none) Sequence 3747 from Patent EP1033401.    120   2e-26
BT073738_1(BT073738|pid:none) Oncorhynchus mykiss clone omyk-evo...   120   2e-26
BT083135_1(BT083135|pid:none) Anoplopoma fimbria clone afim-evh-...   119   4e-26
AY166868_1(AY166868|pid:none) Araneus ventricosus defender again...   119   4e-26
(O65085) RecName: Full=Defender against cell death 1;          S...   115   8e-25
(O13113) RecName: Full=Dolichyl-diphosphooligosaccharide--protei...   115   8e-25
EU284844_1(EU284844|pid:none) TSA: Elaeis guineensis EgEfMPOB000...   115   8e-25
(Q39080) RecName: Full=Dolichyl-diphosphooligosaccharide--protei...   114   1e-24
EF081699_1(EF081699|pid:none) Picea sitchensis clone WS0294_H05 ...   114   2e-24
(Q9M3T9) RecName: Full=Defender against cell death 1;          S...   113   3e-24
AF086839_1(AF086839|pid:none) Populus tremula x Populus tremuloi...   113   3e-24
AM156929_1(AM156929|pid:none) Plantago major partial mRNA for de...   113   4e-24
FN322172_1(FN322172|pid:none) Schistosoma japonicum isolate Anhu...   113   4e-24
AY227437_1(AY227437|pid:none) Petunia x hybrida DAD1 (dad1) mRNA...   112   5e-24
EF145336_1(EF145336|pid:none) Populus trichocarpa clone WS01123_...   112   5e-24
AB162224_1(AB162224|pid:none) Gladiolus hybrid cultivar 'Travele...   112   5e-24
(A2XSY1) RecName: Full=Defender against cell death 1;          S...   112   8e-24
FN322177_1(FN322177|pid:none) Schistosoma japonicum isolate Anhu...   111   1e-23
(Q9ZRA3) RecName: Full=Defender against cell death 1;          S...   111   1e-23
DQ213470_1(DQ213470|pid:none) Taeniopygia guttata clone 0061P002...   111   1e-23
(Q9SME8) RecName: Full=Defender against cell death 2;          S...   111   1e-23
(O22622) RecName: Full=Defender against cell death 2;          S...   111   1e-23
(Q9SMC4) RecName: Full=Defender against cell death 1;          S...   110   2e-23
BT041642_1(BT041642|pid:none) Zea mays full-length cDNA clone ZM...   110   3e-23
AB058922_1(AB058922|pid:none) Nicotiana suaveolens x Nicotiana t...   109   5e-23
AB011799_1(AB011799|pid:none) Citrus unshiu CitDAD-1-2 mRNA for ...   109   5e-23
(Q9SME9) RecName: Full=Defender against cell death 1;          S...   108   7e-23
AB058921_1(AB058921|pid:none) Nicotiana suaveolens x Nicotiana t...   108   7e-23
(O24060) RecName: Full=Defender against cell death 1;          S...   108   9e-23
AF221078_1(AF221078|pid:none) Gallus gallus strain breed Leghorn...   105   1e-21
CR932182_1(CR932182|pid:none) Paramecium tetraurelia, DNA damage...    99   6e-20
CU633901_193(CU633901|pid:none) Podospora anserina genomic DNA c...    99   7e-20
AF395914_1(AF395914|pid:none) Branchiostoma belcheri DAD-1-like ...    96   5e-19
AB219466_1(AB219466|pid:none) Nicotiana tabacum NtDAD1 mRNA for ...    94   2e-18
FN392320_960(FN392320|pid:none) Pichia pastoris GS115 chromosome...    94   3e-18
CR382131_353(CR382131|pid:none) Yarrowia lipolytica strain CLIB1...    88   2e-16
AE017341_441(AE017341|pid:none) Cryptococcus neoformans var. neo...    86   5e-16
FM992689_927(FM992689|pid:none) Candida dubliniensis CD36 chromo...    86   5e-16
AM920431_819(AM920431|pid:none) Penicillium chrysogenum Wisconsi...    84   2e-15
T01646(T01646)apoptotic cell death regulator DAD1 homolog - maiz...    83   6e-15
AM270404_16(AM270404|pid:none) Aspergillus niger contig An18c012...    82   9e-15
DQ013854_1(DQ013854|pid:none) Aspergillus fumigatus OST2p mRNA, ...    78   1e-13
AX970957_1(AX970957|pid:none) Sequence 1760 from Patent EP110480...    78   2e-13
AF051310_1(AF051310|pid:none) Mus musculus defender against deat...    78   2e-13
S61662(S61662;S62142;S62149;S66988) dolichyl-diphosphooligosacch...    73   6e-12
CU928168_368(CU928168|pid:none) Kluyveromyces thermotolerans str...    67   4e-10
AF375655_1(AF375655|pid:none) Ateles belzebuth chamek defender a...    38   0.16
CR378678_84(CR378678|pid:none) Photobacterium profundum SS9 chro...    36   0.77
CR767821_256(CR767821|pid:none) Ehrlichia ruminantium strain Wel...    34   2.2
CP001056_2433(CP001056|pid:none) Clostridium botulinum B str. Ek...    33   3.8
CP000312_551(CP000312|pid:none) Clostridium perfringens SM101, c...    33   3.8
CR925677_247(CR925677|pid:none) Ehrlichia ruminantium str. Garde...    33   6.5
EF576246_1(EF576246|pid:none) Oryza sativa (indica cultivar-grou...    32   8.5

>(Q54FB6) RecName: Full=Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase subunit 2;
           Short=Oligosaccharyl transferase subunit 2;
           EC=2.4.1.119;
          Length = 120

 Score =  213 bits (541), Expect = 4e-54
 Identities = 104/104 (100%), Positives = 104/104 (100%)
 Frame = +3

Query: 108 IVKSFFESYSKTPQKLKIIDLFLIYTFITGVIVFTYCCLVGTYPFNSFLAAFISTVGCFV 287
           IVKSFFESYSKTPQKLKIIDLFLIYTFITGVIVFTYCCLVGTYPFNSFLAAFISTVGCFV
Sbjct: 17  IVKSFFESYSKTPQKLKIIDLFLIYTFITGVIVFTYCCLVGTYPFNSFLAAFISTVGCFV 76

Query: 288 LTVCLRIQINPINNFGKTISIERAFTDYLLCNLILHLVVFNFLG 419
           LTVCLRIQINPINNFGKTISIERAFTDYLLCNLILHLVVFNFLG
Sbjct: 77  LTVCLRIQINPINNFGKTISIERAFTDYLLCNLILHLVVFNFLG 120

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 588,195,924
Number of extensions: 8739299
Number of successful extensions: 19010
Number of sequences better than 10.0: 70
Number of HSP's gapped: 18963
Number of HSP's successfully gapped: 70
Length of query: 186
Length of database: 1,040,966,779
Length adjustment: 121
Effective length of query: 65
Effective length of database: 653,248,294
Effective search space: 42461139110
Effective search space used: 42461139110
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
PSORT 

 psg: 0.86  gvh: 0.49  alm: 0.23  top: 0.60  tms: 0.20  mit: 0.41  mip: 0.14
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 1.00  m_ : 0.00 

	 28.0 %: endoplasmic reticulum
	 20.0 %: plasma membrane
	 16.0 %: nuclear
	 12.0 %: vacuolar
	 12.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: Golgi
	  4.0 %: cytoplasmic

>> prediction for Contig-U06413-1 is end
VS (DIR, S) 2
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0