| Contig-U06402-1 |
| Contig ID |
Contig-U06402-1 |
| Contig update |
2002. 9.13 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
819 |
| Chromosome number (1..6, M) |
1 |
| Chromosome length |
4919822 |
| Start point |
359747 |
| End point |
360566 |
| Strand (PLUS/MINUS) |
PLUS |
| Number of clones |
4 |
| Number of EST |
4 |
| Link to clone list |
U06402 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2008.11. 8 |
| Homology vs DNA |
Query= Contig-U06402-1 (Contig-U06402-1Q) /CSM_Contig/Contig-U06402-1Q.Seq.d
(819 letters)
Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value N
(AU263573) Dictyostelium discoideum vegetative cDNA clone:VS... 856 0.0 4
(AU268864) Dictyostelium discoideum vegetative cDNA clone:VS... 781 0.0 2
(AU263053) Dictyostelium discoideum vegetative cDNA clone:VS... 638 0.0 2
(AU262243) Dictyostelium discoideum vegetative cDNA clone:VS... 609 0.0 3
(AU263572) Dictyostelium discoideum vegetative cDNA clone:VS... 856 0.0 3
(AU268863) Dictyostelium discoideum vegetative cDNA clone:VS... 908 0.0 2
(CP000439) Francisella tularensis subsp. novicida U112, comp... 50 0.13 1
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 32 0.28 8
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 36 0.36 9
(EK323791) 1095462438055 Global-Ocean-Sampling_GS-31-01-01-1... 36 0.38 2
(CU469464) Candidatus Phytoplasma mali strain AT complete ch... 34 0.47 11
(ET069548) QM0AAA2DD11FM1 CCL1 Citrus clementina genomic clo... 48 0.52 1
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041... 36 0.93 9
(EX606583) 255357268 Pea aphid whole body normalized full le... 38 1.2 2
(FF327811) 280435729 Pea aphid whole body normalized full le... 38 1.3 2
(FF305998) 279364671 Pea aphid whole body normalized full le... 38 1.3 2
(ER438877) 1092963805846 Global-Ocean-Sampling_GS-35-01-01-1... 36 1.4 2
(FF298670) 279326726 Pea aphid whole body normalized full le... 38 1.4 2
(EK385403) 1095469480809 Global-Ocean-Sampling_GS-31-01-01-1... 42 1.4 2
(ER550603) 1093016227376 Global-Ocean-Sampling_GS-35-01-01-1... 36 1.4 2
(BM164876) EST567399 PyBS Plasmodium yoelii yoelii cDNA clon... 36 1.5 2
(U40799) Caenorhabditis elegans cosmid F42C5, complete seque... 32 1.7 4
(CR450704) Zebrafish DNA sequence from clone DKEY-65O14 in l... 46 2.1 1
(AJ251225) Bungarus multicinctus partial bl1 gene for beta-b... 46 2.1 1
(BC148415) Synthetic construct Mus musculus clone IMAGE:1000... 46 2.1 1
(AC119967) Mus musculus chromosome 10, clone RP24-473K14, co... 46 2.1 1
(AP008213) Oryza sativa (japonica cultivar-group) genomic DN... 46 2.1 1
(AP004268) Oryza sativa Japonica Group genomic DNA, chromoso... 46 2.1 1
(AM473505) Vitis vinifera contig VV78X263284.3, whole genome... 46 2.1 1
(AM451061) Vitis vinifera contig VV78X160277.5, whole genome... 46 2.1 1
(AC098586) Homo sapiens BAC clone RP11-109F18 from 4, comple... 46 2.1 1
(AC162312) Mus musculus clone RP23-453L16, WORKING DRAFT SEQ... 46 2.1 1
(AC084840) Homo sapiens chromosome 4 clone CTD-2120P15 map 4... 46 2.1 1
(AC084810) Homo sapiens chromosome 4 clone CTD-2518O9 map 4,... 46 2.1 1
(AC060815) Homo sapiens chromosome 4 clone RP11-109F18 map 4... 46 2.1 1
(AC175679) Bos taurus clone CH240-381L3, WORKING DRAFT SEQUE... 46 2.1 1
(AC172846) Bos taurus clone CH240-267A2, WORKING DRAFT SEQUE... 46 2.1 1
(AC163933) Bos taurus clone CH240-111E14, WORKING DRAFT SEQU... 46 2.1 1
(EH537670) FDR202-P00005-DEPE-F_H06 FDR202 Danio rerio cDNA ... 46 2.1 1
(AE000783) Borrelia burgdorferi B31, complete genome. 36 3.1 11
(AC011574) Homo sapiens clone RP11-12I18, WORKING DRAFT SEQU... 34 3.5 5
(EK037999) 1092959485344 Global-Ocean-Sampling_GS-31-01-01-1... 40 4.9 2
(ED654797) GM_WBa0073C04.r GM_WBa Glycine max genomic clone ... 38 5.1 2
(AM643174) Entamoeba dispar GSS, clone dispar104e07.q1k. 38 5.2 2
(FE740226) EST_tthy_evl_884055 tthy_evl Thymallus thymallus ... 42 6.1 2
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 36 7.0 10
(CU570983) Zebrafish DNA sequence from clone CH73-208G10 in ... 32 7.3 5
(CP000395) Borrelia afzelii PKo, complete genome. 42 7.8 11
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 36 8.1 18
(EL929916) EST1546 ARS-CICGRU ONmgEST Ostrinia nubilalis cDN... 38 8.2 2
(AM050154) Bungarus multicinctus b6 chain gene for beta-bung... 44 8.2 1
(AM050153) Bungarus multicinctus b5 chain gene for beta-bung... 44 8.2 1
(BV322628) S236P6483RB3.T0 AlaskanMalamute Canis familiaris ... 44 8.2 1
(AC157211) Mus musculus chromosome 1, clone RP23-204C6, comp... 44 8.2 1
(AM446754) Vitis vinifera contig VV78X081576.1, whole genome... 44 8.2 1
(CS741857) Sequence 9853 from Patent WO2005083127. 44 8.2 1
(CT737213) Pig DNA sequence from clone CH242-10P9 on chromos... 44 8.2 1
(BC030604) Homo sapiens trafficking protein particle complex... 44 8.2 1
(AL132639) Human chromosome 14 DNA sequence BAC R-407N17 of ... 44 8.2 1
(AL109628) Human chromosome 14 DNA sequence BAC R-545M17 of ... 44 8.2 1
(AC073941) Homo sapiens chromosome 15 clone RP11-627D16 map ... 44 8.2 1
(AC160069) Bos taurus clone CH240-82J22, WORKING DRAFT SEQUE... 44 8.2 1
(AC140773) Medicago truncatula clone mth2-22b21, WORKING DRA... 44 8.2 1
(AC116055) Rattus norvegicus clone CH230-11H12, *** SEQUENCI... 44 8.2 1
(CU915368) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.2 1
(CU618334) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.2 1
(AC087756) Homo sapiens chromosome 15 clone RP11-627D16 map ... 44 8.2 1
(CU076071) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.2 1
(AC231360) Medicago truncatula clone mth2-38a1, WORKING DRAF... 44 8.2 1
(AC224927) Bos taurus clone CH240-472E2, WORKING DRAFT SEQUE... 44 8.2 1
(AC175007) Atelerix albiventris clone LB4-206A16, WORKING DR... 44 8.2 1
(AC172850) Bos taurus clone CH240-265B11, WORKING DRAFT SEQU... 44 8.2 1
(AC164242) Bos taurus clone CH240-139A8, *** SEQUENCING IN P... 44 8.2 1
(BH166003) ENTPY34TFB Entamoeba histolytica Sheared DNA Enta... 44 8.2 1
(BH155303) ENTTN88TF Entamoeba histolytica Sheared DNA Entam... 44 8.2 1
(FH196847) CHO_OF3056xo19r1.ab1 CHO_OF3 Nicotiana tabacum ge... 44 8.2 1
(EK308135) 1095462387654 Global-Ocean-Sampling_GS-31-01-01-1... 44 8.2 1
(EI814884) POTHA30TF Solanum tuberosum RHPOTKEY BAC ends Sol... 44 8.2 1
(CR347122) mte1-80H20RM1 BAC end, cultivar Jemalong A17 of M... 44 8.2 1
(ES421861) pm_OSU_shoot_MH_2003-04_003D12 Douglas-fir maximu... 44 8.2 1
(DY529665) BAAC-PNP1310M02.g2 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DY528343) BAAC-PNP1306C15.g2 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DY528153) BAAC-PNP1303J15.g2 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DY527852) BAAC-PNP1300M02.g2 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DY527031) BAAC-PNP1298I07.g2 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DY526667) BAAC-PNP1311I11.g1 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DY526065) BAAC-PNP1305O15.g1 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DY525978) BAAC-PNP1305K23.g1 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DY525953) BAAC-PNP1305J21.g1 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DY525074) BAAC-PNP1302E12.g1 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DY524718) BAAC-PNP1301F08.g1 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DY524627) BAAC-PNP1301B10.g1 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DT937507) BAAC-PNP1274M22.g1 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DT937103) BAAC-PNP1286C14.g1 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DT936655) BAAC-PNP1284O01.g1 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DT936149) BAAC-PNP1283E07.g1 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DT935956) BAAC-PNP1282K06.g1 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DT935734) BAAC-PNP1282A04.g1 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DT935601) BAAC-PNP1281H03.g1 C.remanei EST SB146 Caenorhabd... 44 8.2 1
(DT934585) BAAC-PNP1278H21.g1 C.remanei EST SB146 Caenorhabd... 44 8.2 1
>(AU263573) Dictyostelium discoideum vegetative cDNA clone:VSD159,
3' end single read.
Length = 708
Score = 856 bits (432), Expect(4) = 0.0
Identities = 432/432 (100%)
Strand = Plus / Plus
Query: 41 tgacagtttatttaacaagacatggtttaagagaggattggattaataaattatggagat 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 tgacagtttatttaacaagacatggtttaagagaggattggattaataaattatggagat 98
Query: 101 ctacagcattaagaccatcagatccacctttatcggcacgtggatttcatatagctaaag 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 ctacagcattaagaccatcagatccacctttatcggcacgtggatttcatatagctaaag 158
Query: 161 agttgggtattttcagtaaaactttaggattaaaacatattatatcatcaccaatggaga 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 agttgggtattttcagtaaaactttaggattaaaacatattatatcatcaccaatggaga 218
Query: 221 gatgtattcaaacaagtacagcaatagctgatgaattagatttgccaattaaaattgatt 280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gatgtattcaaacaagtacagcaatagctgatgaattagatttgccaattaaaattgatt 278
Query: 281 atggtgttattgaatgggttggttctgatccaagacctgatgatattttaaatccacttt 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 atggtgttattgaatgggttggttctgatccaagacctgatgatattttaaatccacttt 338
Query: 341 caaatgaggaattaaaattaaaatatccaagaattgatttagattataaatcaacaacaa 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 caaatgaggaattaaaattaaaatatccaagaattgatttagattataaatcaacaacaa 398
Query: 401 ataatataccaacaaaagaatcaattgaagaattacatgaaagaacaaagatatcagttg 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 ataatataccaacaaaagaatcaattgaagaattacatgaaagaacaaagatatcagttg 458
Query: 461 atcaaatcattg 472
||||||||||||
Sbjct: 459 atcaaatcattg 470
Score = 371 bits (187), Expect(4) = 0.0
Identities = 187/187 (100%)
Strand = Plus / Plus
Query: 473 gaaaagtttaaagatgatggaccaatcattatcgtttctcatgccgctacaatgattgct 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gaaaagtttaaagatgatggaccaatcattatcgtttctcatgccgctacaatgattgct 529
Query: 533 ttaggtagaggtattttaaatgataataatgcaccattaagatctggtgtttgtagttta 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ttaggtagaggtattttaaatgataataatgcaccattaagatctggtgtttgtagttta 589
Query: 593 tccaaatttaattttaatactacagaaaataaatgggaacttgaatatactggtaaatct 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tccaaatttaattttaatactacagaaaataaatgggaacttgaatatactggtaaatct 649
Query: 653 gatttca 659
|||||||
Sbjct: 650 gatttca 656
Score = 44.1 bits (22), Expect(4) = 0.0
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 661 ggaagatggagaacaatctcat 682
||||||||||||||||||||||
Sbjct: 657 ggaagatggagaacaatctcat 678
Score = 38.2 bits (19), Expect(4) = 0.0
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 683 tggacttttaaacgtccag 701
|||||||||||||||||||
Sbjct: 678 tggacttttaaacgtccag 696
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 897,445,280
Number of extensions: 55668662
Number of successful extensions: 4769493
Number of sequences better than 10.0: 118
Length of query: 819
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 795
Effective length of database: 97,308,875,965
Effective search space: 77360556392175
Effective search space used: 77360556392175
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
|
| protein update |
2009. 6.21 |
| Homology vs Protein |
Query= Contig-U06402-1 (Contig-U06402-1Q) /CSM_Contig/Contig-U06402-1Q.Seq.d
(819 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR382132_938(CR382132|pid:none) Yarrowia lipolytica strain CLIB1... 86 2e-29
FM992694_149(FM992694|pid:none) Candida dubliniensis CD36 chromo... 63 1e-20
AP006852_153(AP006852|pid:none) Candida albicans genomic DNA, ch... 60 9e-20
AX023756_1(AX023756|pid:none) Sequence 13 from Patent EP0999284. 60 9e-20
CP000497_570(CP000497|pid:none) Pichia stipitis CBS 6054 chromos... 63 1e-19
CU928174_411(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 74 1e-18
(P53929) RecName: Full=Uncharacterized protein YNL108C; &CS5595... 60 2e-17
FN392322_389(FN392322|pid:none) Pichia pastoris GS115 chromosome... 60 3e-17
CR380955_116(CR380955|pid:none) Candida glabrata strain CBS138 c... 68 3e-17
AE016819_10(AE016819|pid:none) Ashbya gossypii (= Eremothecium g... 55 3e-16
CP001287_259(CP001287|pid:none) Cyanothece sp. PCC 8801, complet... 87 5e-16
(Q12415) RecName: Full=Transcription factor tau 55 kDa subunit; ... 58 5e-16
AY692910_1(AY692910|pid:none) Saccharomyces cerevisiae clone FLH... 58 5e-16
CP000393_1831(CP000393|pid:none) Trichodesmium erythraeum IMS101... 86 1e-15
CR380948_194(CR380948|pid:none) Candida glabrata strain CBS138 c... 55 4e-14
FJ477836_15(FJ477836|pid:none) Oscillatoria sp. PCC 6506 anatoxi... 81 5e-14
CP000117_932(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 79 2e-13
AE2177(AE2177) hypothetical protein alr2972 [imported] - Nostoc ... 76 1e-12
CP000828_682(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 74 4e-12
CR382133_224(CR382133|pid:none) Debaryomyces hansenii strain CBS... 66 1e-09
AE017353_235(AE017353|pid:none) Cryptococcus neoformans var. neo... 49 3e-09
CU633900_295(CU633900|pid:none) Podospora anserina genomic DNA c... 50 2e-07
CP000159_1910(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 58 4e-07
AF040659_7(AF040659|pid:none) Caenorhabditis elegans cosmid ZK48... 55 2e-06
CR382127_248(CR382127|pid:none) Yarrowia lipolytica strain CLIB1... 55 4e-06
AK049106_1(AK049106|pid:none) Mus musculus ES cells cDNA, RIKEN ... 54 6e-06
AP009493_5214(AP009493|pid:none) Streptomyces griseus subsp. gri... 53 1e-05
CP000481_1165(CP000481|pid:none) Acidothermus cellulolyticus 11B... 53 1e-05
CP001229_570(CP001229|pid:none) Sulfurihydrogenibium azorense Az... 51 4e-05
CP001230_338(CP001230|pid:none) Persephonella marina EX-H1, comp... 51 4e-05
T32867(T32867)hypothetical protein ZK484.6 - Caenorhabditis eleg... 51 5e-05
AM920431_1473(AM920431|pid:none) Penicillium chrysogenum Wiscons... 47 6e-05
BC069511_1(BC069511|pid:none) Homo sapiens ubiquitin associated ... 49 2e-04
AL138646_9(AL138646|pid:none) Arabidopsis thaliana DNA chromosom... 49 2e-04
AE014297_3570(AE014297|pid:none) Drosophila melanogaster chromos... 49 3e-04
AF521702_1(AF521702|pid:none) Homo sapiens T-cell ubiquitin liga... 49 3e-04
(P57075) RecName: Full=Ubiquitin-associated and SH3 domain-conta... 49 3e-04
(Q9VCE9) RecName: Full=Protein UBASH3A homolog; &AE014297_3571(... 49 3e-04
BC069357_1(BC069357|pid:none) Homo sapiens ubiquitin associated ... 49 3e-04
AE014297_3572(AE014297|pid:none) Drosophila melanogaster chromos... 49 3e-04
CP000001_1825(CP000001|pid:none) Bacillus cereus E33L, complete ... 48 4e-04
AL138646_10(AL138646|pid:none) Arabidopsis thaliana DNA chromoso... 47 7e-04
AE017355_1831(AE017355|pid:none) Bacillus thuringiensis serovar ... 47 7e-04
CP001080_1453(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP... 47 7e-04
CT005248_69(CT005248|pid:none) Leishmania major strain Friedlin,... 47 7e-04
(A4W6B3) RecName: Full=Probable phosphoglycerate mutase gpmB; ... 47 0.001
CP000903_1857(CP000903|pid:none) Bacillus weihenstephanensis KBA... 46 0.001
(A6TI09) RecName: Full=Probable phosphoglycerate mutase gpmB; ... 46 0.001
AM502227_61(AM502227|pid:none) Leishmania infantum chromosome 9. 46 0.001
AP006725_725(AP006725|pid:none) Klebsiella pneumoniae NTUH-K2044... 46 0.001
CP001177_1975(CP001177|pid:none) Bacillus cereus AH187, complete... 46 0.001
CP000485_1704(CP000485|pid:none) Bacillus thuringiensis str. Al ... 46 0.002
(A9MR94) RecName: Full=Probable phosphoglycerate mutase gpmB; ... 46 0.002
CP001186_1894(CP001186|pid:none) Bacillus cereus G9842, complete... 45 0.002
CP001080_108(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 45 0.002
AE015927_2371(AE015927|pid:none) Clostridium tetani E88, complet... 45 0.002
CP000481_899(CP000481|pid:none) Acidothermus cellulolyticus 11B ... 45 0.002
(Q8Z0T4) RecName: Full=Probable phosphoglycerate mutase gpmB; ... 45 0.003
(A1AJW4) RecName: Full=Probable phosphoglycerate mutase gpmB; ... 44 0.005
AM269991_26(AM269991|pid:none) Aspergillus niger contig An01c045... 37 0.005
AL138646_11(AL138646|pid:none) Arabidopsis thaliana DNA chromoso... 43 0.011
CP000909_1614(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 43 0.011
AB107356_1(AB107356|pid:none) Bombyx mori mRNA for ecdysteroid-p... 43 0.011
CP000088_1830(CP000088|pid:none) Thermobifida fusca YX, complete... 43 0.011
AM502231_42(AM502231|pid:none) Leishmania infantum chromosome 13. 43 0.014
(A4TQH5) RecName: Full=Probable phosphoglycerate mutase gpmB; ... 43 0.014
(B7LNT7) RecName: Full=Probable phosphoglycerate mutase gpmB; ... 43 0.014
CP001068_365(CP001068|pid:none) Ralstonia pickettii 12J chromoso... 42 0.018
AP006618_2944(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 42 0.018
AM437289_1(AM437289|pid:none) Vitis vinifera contig VV78X017796.... 42 0.024
CP001337_1642(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 42 0.024
AM180088_2597(AM180088|pid:none) Haloquadratum walsbyi DSM 16790... 42 0.024
CP000480_6132(CP000480|pid:none) Mycobacterium smegmatis str. MC... 42 0.024
CP000388_1129(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 42 0.024
(Q57G26) RecName: Full=Probable phosphoglycerate mutase gpmB; ... 42 0.024
CP000656_1189(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 42 0.032
CP001600_589(CP001600|pid:none) Edwardsiella ictaluri 93-146, co... 42 0.032
AM494946_58(AM494946|pid:none) Leishmania braziliensis chromosom... 41 0.041
AM494950_31(AM494950|pid:none) Leishmania braziliensis chromosom... 41 0.041
CP000771_361(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 41 0.041
AP009049_152(AP009049|pid:none) Clostridium kluyveri NBRC 12016 ... 40 0.070
CP001298_1416(CP001298|pid:none) Methylobacterium chloromethanic... 40 0.070
CP001022_2962(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 40 0.070
CP000387_1916(CP000387|pid:none) Streptococcus sanguinis SK36, c... 40 0.070
CP000725_386(CP000725|pid:none) Streptococcus gordonii str. Chal... 40 0.092
CP000920_269(CP000920|pid:none) Streptococcus pneumoniae P1031, ... 40 0.12
AE007317_219(AE007317|pid:none) Streptococcus pneumoniae R6, com... 40 0.12
AC159455_18(AC159455|pid:none) Trypanosoma brucei chromosome 5 c... 40 0.12
CP001033_247(CP001033|pid:none) Streptococcus pneumoniae CGSP14,... 40 0.12
CP000410_206(CP000410|pid:none) Streptococcus pneumoniae D39, co... 40 0.12
CP000730_382(CP000730|pid:none) Staphylococcus aureus subsp. aur... 39 0.16
CP000919_234(CP000919|pid:none) Streptococcus pneumoniae JJA, co... 39 0.16
CR522870_2740(CR522870|pid:none) Desulfotalea psychrophila LSv54... 39 0.16
CP000721_2758(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 39 0.16
AM295250_1689(AM295250|pid:none) Staphylococcus carnosus subsp. ... 39 0.16
CP000975_315(CP000975|pid:none) Methylacidiphilum infernorum V4,... 39 0.20
CP000027_1375(CP000027|pid:none) Dehalococcoides ethenogenes 195... 39 0.20
CP000479_299(CP000479|pid:none) Mycobacterium avium 104, complet... 39 0.20
AE005176_1714(AE005176|pid:none) Lactococcus lactis subsp. lacti... 39 0.20
CP000612_1877(CP000612|pid:none) Desulfotomaculum reducens MI-1,... 39 0.20
AE016958_269(AE016958|pid:none) Mycobacterium avium subsp. parat... 39 0.20
CP000679_1857(CP000679|pid:none) Caldicellulosiruptor saccharoly... 39 0.27
(Q5UQ52) RecName: Full=Uncharacterized phosphoglycerate mutase f... 38 0.35
AL935254_181(AL935254|pid:none) Lactobacillus plantarum strain W... 38 0.35
AP011115_3548(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 38 0.35
A70471(A70471) phosphoglycerate mutase 1 - Aquifex aeolicus &AE... 38 0.35
AP007151_381(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 38 0.35
CP000806_3434(CP000806|pid:none) Cyanothece sp. ATCC 51142 circu... 38 0.45
CR936503_804(CR936503|pid:none) Lactobacillus sakei strain 23K c... 38 0.45
BA000033_351(BA000033|pid:none) Staphylococcus aureus subsp. aur... 38 0.45
BX248358_303(BX248358|pid:none) Corynebacterium diphtheriae grav... 37 0.59
CR543861_1267(CR543861|pid:none) Acinetobacter sp. ADP1 complete... 37 0.59
CP000431_1172(CP000431|pid:none) Rhodococcus jostii RHA1, comple... 37 0.59
AE017283_800(AE017283|pid:none) Propionibacterium acnes KPA17120... 37 0.59
CP000023_109(CP000023|pid:none) Streptococcus thermophilus LMG 1... 37 0.78
CP000943_2523(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 37 0.78
CP001331_385(CP001331|pid:none) Micromonas sp. RCC299 chromosome... 37 0.78
AE017333_1031(AE017333|pid:none) Bacillus licheniformis DSM 13, ... 37 0.78
BA000030_5884(BA000030|pid:none) Streptomyces avermitilis MA-468... 37 1.0
DQ248872_1(DQ248872|pid:none) Corynebacterium glutamicum phospho... 37 1.0
EU972517_1(EU972517|pid:none) Zea mays clone 382606 hypothetical... 36 1.3
CP000667_4044(CP000667|pid:none) Salinispora tropica CNB-440, co... 36 1.3
CP000557_1309(CP000557|pid:none) Geobacillus thermodenitrificans... 36 1.3
CP001078_3056(CP001078|pid:none) Clostridium botulinum E3 str. A... 36 1.3
AP007174_391(AP007174|pid:none) Aspergillus oryzae RIB40 genomic... 36 1.3
BA000031_1307(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22... 36 1.3
CP000699_3532(CP000699|pid:none) Sphingomonas wittichii RW1, com... 36 1.3
(O14274) RecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; E... 36 1.3
FM204884_1600(FM204884|pid:none) Streptococcus equi subsp. zooep... 36 1.3
CP001056_3315(CP001056|pid:none) Clostridium botulinum B str. Ek... 36 1.3
AM406671_1854(AM406671|pid:none) Lactococcus lactis subsp. cremo... 36 1.3
AM270177_5(AM270177|pid:none) Aspergillus niger contig An08c0220... 36 1.7
CP001339_628(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, c... 36 1.7
AM920437_31(AM920437|pid:none) Penicillium chrysogenum Wisconsin... 36 1.7
AE015929_2364(AE015929|pid:none) Staphylococcus epidermidis ATCC... 36 1.7
CP000139_1814(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 36 1.7
CP000474_4026(CP000474|pid:none) Arthrobacter aurescens TC1, com... 35 2.3
CP000029_51(CP000029|pid:none) Staphylococcus epidermidis RP62A,... 35 2.3
CP000820_3934(CP000820|pid:none) Frankia sp. EAN1pec, complete g... 35 2.3
CP000875_3384(CP000875|pid:none) Herpetosiphon aurantiacus ATCC ... 35 2.3
CP000142_248(CP000142|pid:none) Pelobacter carbinolicus DSM 2380... 35 2.3
CP000875_41(CP000875|pid:none) Herpetosiphon aurantiacus ATCC 23... 35 2.3
BA000002_1615(BA000002|pid:none) Aeropyrum pernix K1 DNA, comple... 35 2.3
D72480(D72480)phosphohistidine phosphatase (EC 3.1.3.-) sixA-rel... 35 2.3
AM942444_233(AM942444|pid:none) Corynebacterium urealyticum DSM ... 35 2.3
CP000478_235(CP000478|pid:none) Syntrophobacter fumaroxidans MPO... 35 2.9
EU972765_1(EU972765|pid:none) Zea mays clone 387445 unknown mRNA. 35 2.9
CU468230_1750(CU468230|pid:none) Acinetobacter baumannii str. SD... 35 2.9
CU459141_1921(CU459141|pid:none) Acinetobacter baumannii str. AY... 35 2.9
AK143203_1(AK143203|pid:none) Mus musculus 0 day neonate eyeball... 35 2.9
CP000724_3499(CP000724|pid:none) Alkaliphilus metalliredigens QY... 35 2.9
CP000058_3524(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 35 2.9
CP000394_2335(CP000394|pid:none) Granulibacter bethesdensis CGDN... 35 2.9
CP000521_1777(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 35 2.9
AL807811_13(AL807811|pid:none) Mouse DNA sequence from clone RP2... 35 2.9
CP000388_1125(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 35 2.9
CP000033_775(CP000033|pid:none) Lactobacillus acidophilus NCFM, ... 32 3.2
AJ271801_1(AJ271801|pid:none) Mus musculus mRNA for aflatoxin B1... 35 3.9
AP007164_761(AP007164|pid:none) Aspergillus oryzae RIB40 genomic... 35 3.9
CP001108_2109(CP001108|pid:none) Prosthecochloris aestuarii DSM ... 35 3.9
AJ938182_326(AJ938182|pid:none) Staphylococcus aureus RF122 comp... 35 3.9
AP007151_930(AP007151|pid:none) Aspergillus oryzae RIB40 genomic... 35 3.9
BC031857_1(BC031857|pid:none) Mus musculus aldo-keto reductase f... 35 3.9
CP000686_978(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 35 3.9
CP000075_3672(CP000075|pid:none) Pseudomonas syringae pv. syring... 34 5.0
AF389083_2(AF389083|pid:none) Streptococcus suis putative phosph... 34 5.0
(P52086) RecName: Full=Alpha-ribazole phosphatase; EC=3... 34 5.0
CU928160_599(CU928160|pid:none) Escherichia coli IAI1 chromosome... 34 5.0
CP001349_127(CP001349|pid:none) Methylobacterium nodulans ORS 20... 34 5.0
CP001348_612(CP001348|pid:none) Clostridium cellulolyticum H10, ... 34 5.0
AE017261_1423(AE017261|pid:none) Picrophilus torridus DSM 9790, ... 34 5.0
CP000407_291(CP000407|pid:none) Streptococcus suis 05ZYH33, comp... 34 5.0
AB037424_1(AB037424|pid:none) Rattus norvegicus aiar mRNA for an... 34 5.0
CP000511_852(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1,... 34 5.0
(Q8CG45) RecName: Full=Aflatoxin B1 aldehyde reductase member 2;... 34 5.0
CU928163_720(CU928163|pid:none) Escherichia coli UMN026 chromoso... 34 5.0
U82598_111(U82598|pid:none) Escherichia coli genomic sequence of... 34 5.0
CP000850_4355(CP000850|pid:none) Salinispora arenicola CNS-205, ... 34 5.0
(Q9NQ88) RecName: Full=Probable fructose-2,6-bisphosphatase TIGA... 34 6.6
CP000514_267(CP000514|pid:none) Marinobacter aquaeolei VT8, comp... 34 6.6
CU928164_608(CU928164|pid:none) Escherichia coli IAI39 chromosom... 34 6.6
AB023511_1(AB023511|pid:none) Drosophila melanogaster mRNA for 6... 34 6.6
CP001341_2067(CP001341|pid:none) Arthrobacter chlorophenolicus A... 34 6.6
CP001357_1328(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 34 6.6
AB023510_1(AB023510|pid:none) Drosophila melanogaster mRNA for 6... 34 6.6
AF525358_1(AF525358|pid:none) Mus musculus aldo-keto reductase (... 34 6.6
BT082084_1(BT082084|pid:none) Drosophila melanogaster MIP03150 f... 34 6.6
AE015924_1298(AE015924|pid:none) Porphyromonas gingivalis W83, c... 34 6.6
FM180568_538(FM180568|pid:none) Escherichia coli 0127:H6 E2348/6... 34 6.6
CP001145_1252(CP001145|pid:none) Coprothermobacter proteolyticus... 34 6.6
AX971854_1(AX971854|pid:none) Sequence 2657 from Patent EP1104808. 34 6.6
BA000022_2408(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA,... 34 6.6
CP000682_771(CP000682|pid:none) Metallosphaera sedula DSM 5348, ... 33 8.6
CP001283_1706(CP001283|pid:none) Bacillus cereus AH820, complete... 33 8.6
CP001287_2684(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 33 8.6
AM849034_2674(AM849034|pid:none) Clavibacter michiganensis subsp... 33 8.6
AM406671_1545(AM406671|pid:none) Lactococcus lactis subsp. cremo... 33 8.6
CP000408_2033(CP000408|pid:none) Streptococcus suis 98HAH33, com... 33 8.6
AE005674_643(AE005674|pid:none) Shigella flexneri 2a str. 301, c... 33 8.6
CP000576_542(CP000576|pid:none) Prochlorococcus marinus str. MIT... 33 8.6
CU928162_616(CU928162|pid:none) Escherichia coli ED1a chromosome... 33 8.6
>CR382132_938(CR382132|pid:none) Yarrowia lipolytica strain CLIB122
chromosome F complete sequence.
Length = 421
Score = 85.5 bits (210), Expect(2) = 2e-29
Identities = 57/150 (38%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Frame = +1
Query: 43 TVYLTRHGLREDWINK--LWRSTALRPSDPPLSARGFHIAKELGIFSKTLG--LKHIISS 210
T+Y+TRHG R +W+ + S SDP L+ +G AKELG + K + ++ I +S
Sbjct: 4 TIYITRHGFRANWLTDQPIPPSPTGIESDPALAEKGVVQAKELGEYLKDIKPPIQRIYAS 63
Query: 211 PMERCIQTSTAIADELDLPIKIDYGVIEWVGSDPRPDDILNPLSNEELKLKYPRIDLDYK 390
P RCI+T+T AD LDL I + G EW + P SN LK +PR+D +Y
Sbjct: 64 PFYRCIETATPTADHLDLAIYPEGGCGEWFKRERSSHP--KPASNAVLKGFFPRVDKNYN 121
Query: 391 STTNNIPTKESIEELHERTKISVDQIIGKV 480
S E ELHERTK ++ +I K+
Sbjct: 122 SLVVAGDDGEDEAELHERTKRFLNVLIEKL 151
Score = 67.4 bits (163), Expect(2) = 2e-29
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Frame = +2
Query: 470 LEKFKDDGP----IIIVSHAATMIALGRGILNDNNAPLRSGVCSLSKFNFNTTE---NKW 628
+EK + P I+IVSHAA IALGR ++ DN+ +R+GVCSL F + +W
Sbjct: 148 IEKLNKEEPEIETILIVSHAAPRIALGRALVGDNSLDIRTGVCSLDTFEVDKEGGLCGEW 207
Query: 629 ELEYTGKSDFMEDGEQSHWTFKRP 700
+L+ +G+ D++ +GE HW F P
Sbjct: 208 KLKSSGQVDYLSEGEVMHWGFDVP 231
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,112,676,507
Number of extensions: 21050240
Number of successful extensions: 52523
Number of sequences better than 10.0: 201
Number of HSP's gapped: 52435
Number of HSP's successfully gapped: 221
Length of query: 273
Length of database: 1,040,966,779
Length adjustment: 126
Effective length of query: 147
Effective length of database: 637,226,869
Effective search space: 93672349743
Effective search space used: 93672349743
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
|
| PSORT |
|
| VS (DIR, S) |
4 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
0 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |