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Dicty_cDB
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U06379-1
Contig ID Contig-U06379-1
Contig update 2001. 8.30
Contig sequence 
>Contig-U06379-1 (Contig-U06379-1Q) /CSM_Contig/Contig-U06379-1Q.Seq.d
GATAGGAATATTCTCTCACACATAAACACACACGCACACACAAAACACAC
AAACAATTTAAATAATAATAATAAAAAAGAATTTTGTTAAAAAAAAAAAA
AAAACATTTTTTTTTTTTTATATAAGTAATCAACAATTAATAACAAATAG
TAACAAATAATAATAATAATAATAATCATACTCAACCAAGCATTAAAATG
TAACACACACACACACACACACACAAATCATTTTATTTTTTATTTTTTTT
TGAAAAAAAAAAAAAAAGAAAATAAAAAAAGAAAA
Gap no gap
Contig length 285
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 2835044
End point 2835270
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U06379
List of clone(s) 

est1=VSB527Z,1,286
Translated Amino Acid sequence 
drnilshinthahtkhtnnlnnnnkkefc*kkkkniffflyk*stinnk**QIIIIIIII
LNQALKCNTHTHTHTNHFIFYFFLKKKKKENKKRK
Translated Amino Acid sequence (All Frames) 
Frame A:
drnilshinthahtkhtnnlnnnnkkefc*kkkkniffflyk*stinnk**QIIIIIIII
LNQALKCNTHTHTHTNHFIFYFFLKKKKKENKKRK


Frame B:
igifsht*ththtqntqti*iiiikknfvkkkkktffffyisnqqlitnsnk******sy
stkh*nvthththtqiilffiff*kkkkkkikke


Frame C:
*eyslthkhtrthkthkqfk****krillkkkkkhffffi*vinn**qivtnnnnnnnht
qpsikm*hthththksfyflfffekkkkrk*kkk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U06379-1 (Contig-U06379-1Q)
/CSM_Contig/Contig-U06379-1Q.Seq.d
         (285 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U06379-1 (Contig-U06379-1Q) /CSM_Contig/Conti...    66  2e-11
Contig-U14896-1 (Contig-U14896-1Q) /CSM_Contig/Conti...    46  2e-05
Contig-U12486-1 (Contig-U12486-1Q) /CSM_Contig/Conti...    46  2e-05
Contig-U08180-1 (Contig-U08180-1Q) /CSM_Contig/Conti...    46  2e-05
Contig-U12013-1 (Contig-U12013-1Q) /CSM_Contig/Conti...    44  8e-05
Contig-U11167-1 (Contig-U11167-1Q) /CSM_Contig/Conti...    44  8e-05
Contig-U06359-1 (Contig-U06359-1Q) /CSM_Contig/Conti...    44  8e-05
Contig-U05217-1 (Contig-U05217-1Q) /CSM_Contig/Conti...    44  8e-05
Contig-U00662-1 (Contig-U00662-1Q) /CSM_Contig/Conti...    44  8e-05
Contig-U11418-1 (Contig-U11418-1Q) /CSM_Contig/Conti...    42  3e-04

>Contig-U06379-1 (Contig-U06379-1Q) /CSM_Contig/Contig-U06379-1Q.Seq.d
          Length = 285

 Score = 65.9 bits (33), Expect = 2e-11
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                           
Query: 56 atttaaataataataataaaaaagaattttgtt 88
          |||||||||||||||||||||||||||||||||
Sbjct: 56 atttaaataataataataaaaaagaattttgtt 88


 Score = 54.0 bits (27), Expect = 8e-08
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 226 aatcattttattttttatttttttttg 252
           |||||||||||||||||||||||||||
Sbjct: 226 aatcattttattttttatttttttttg 252


 Score = 52.0 bits (26), Expect = 3e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 177 catactcaaccaagcattaaaatgta 202
           ||||||||||||||||||||||||||
Sbjct: 177 catactcaaccaagcattaaaatgta 202


 Score = 32.2 bits (16), Expect = 0.30
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                          
Query: 1  gataggaatattctct 16
          ||||||||||||||||
Sbjct: 1  gataggaatattctct 16


 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 60  aaataataataataa 74
           |||||||||||||||
Sbjct: 155 aaataataataataa 169


 Score = 28.2 bits (14), Expect = 4.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 61  aataataataataa 74
           ||||||||||||||
Sbjct: 162 aataataataataa 175


 Score = 28.2 bits (14), Expect = 4.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 61  aataataataataa 74
           ||||||||||||||
Sbjct: 159 aataataataataa 172


>Contig-U14896-1 (Contig-U14896-1Q) /CSM_Contig/Contig-U14896-1Q.Seq.d
          Length = 846

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 61  aataataataataaaaaagaatt 83
           |||||||||||||||||||||||
Sbjct: 622 aataataataataaaaaagaatt 644


 Score = 32.2 bits (16), Expect = 0.30
 Identities = 16/16 (100%)
 Strand = Plus / Plus

                           
Query: 59  taaataataataataa 74
           ||||||||||||||||
Sbjct: 698 taaataataataataa 713


 Score = 30.2 bits (15), Expect = 1.2
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 60  aaataataataataa 74
           |||||||||||||||
Sbjct: 615 aaataataataataa 629


 Score = 28.2 bits (14), Expect = 4.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 61  aataataataataa 74
           ||||||||||||||
Sbjct: 736 aataataataataa 749


 Score = 28.2 bits (14), Expect = 4.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 61  aataataataataa 74
           ||||||||||||||
Sbjct: 733 aataataataataa 746


 Score = 28.2 bits (14), Expect = 4.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 61  aataataataataa 74
           ||||||||||||||
Sbjct: 724 aataataataataa 737


 Score = 28.2 bits (14), Expect = 4.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 61  aataataataataa 74
           ||||||||||||||
Sbjct: 727 aataataataataa 740


 Score = 28.2 bits (14), Expect = 4.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 61  aataataataataa 74
           ||||||||||||||
Sbjct: 706 aataataataataa 719


 Score = 28.2 bits (14), Expect = 4.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 61  aataataataataa 74
           ||||||||||||||
Sbjct: 709 aataataataataa 722


 Score = 28.2 bits (14), Expect = 4.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 61  aataataataataa 74
           ||||||||||||||
Sbjct: 703 aataataataataa 716


 Score = 28.2 bits (14), Expect = 4.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 61  aataataataataa 74
           ||||||||||||||
Sbjct: 712 aataataataataa 725


 Score = 28.2 bits (14), Expect = 4.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 61  aataataataataa 74
           ||||||||||||||
Sbjct: 730 aataataataataa 743


 Score = 28.2 bits (14), Expect = 4.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 61  aataataataataa 74
           ||||||||||||||
Sbjct: 721 aataataataataa 734


 Score = 28.2 bits (14), Expect = 4.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 61  aataataataataa 74
           ||||||||||||||
Sbjct: 715 aataataataataa 728


 Score = 28.2 bits (14), Expect = 4.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 61  aataataataataa 74
           ||||||||||||||
Sbjct: 619 aataataataataa 632


 Score = 28.2 bits (14), Expect = 4.7
 Identities = 14/14 (100%)
 Strand = Plus / Plus

                         
Query: 61  aataataataataa 74
           ||||||||||||||
Sbjct: 718 aataataataataa 731


>Contig-U12486-1 (Contig-U12486-1Q) /CSM_Contig/Contig-U12486-1Q.Seq.d
          Length = 1238

 Score = 46.1 bits (23), Expect = 2e-05
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 56   atttaaataataataataaaaaa 78
            |||||||||||||||||||||||
Sbjct: 1182 atttaaataataataataaaaaa 1204


 Score = 30.2 bits (15), Expect = 1.2
 Identities = 22/23 (95%), Gaps = 1/23 (4%)
 Strand = Plus / Minus

                                  
Query: 230 attttattttt-tattttttttt 251
           ||||||||||| |||||||||||
Sbjct: 37  attttatttttatattttttttt 15


 Score = 28.2 bits (14), Expect = 4.7
 Identities = 17/18 (94%)
 Strand = Plus / Plus

                              
Query: 61   aataataataataaaaaa 78
            ||||||||||| ||||||
Sbjct: 1190 aataataataaaaaaaaa 1207


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 29,940
Number of Sequences: 6905
Number of extensions: 29940
Number of successful extensions: 20386
Number of sequences better than 10.0: 3056
length of query: 285
length of database: 5,674,871
effective HSP length: 15
effective length of query: 270
effective length of database: 5,571,296
effective search space: 1504249920
effective search space used: 1504249920
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2008.11. 8
Homology vs DNA 
Query= Contig-U06379-1 (Contig-U06379-1Q) /CSM_Contig/Contig-U06379-1Q.Seq.d
         (285 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU262073) Dictyostelium discoideum vegetative cDNA clone:VS...    54   3e-16  3
(AM447626) Vitis vinifera contig VV78X006468.3, whole genome...    52   0.011  1
(AM446835) Vitis vinifera, whole genome shotgun sequence, co...    52   0.011  1
(AM432187) Vitis vinifera contig VV78X224082.9, whole genome...    52   0.011  1
(AC015525) Homo sapiens chromosome 3 clone RP11-110C15 map 3...    40   0.028  2
(AM477915) Vitis vinifera contig VV78X080362.5, whole genome...    50   0.042  1
(AM461182) Vitis vinifera contig VV78X211950.4, whole genome...    50   0.042  1
(AM451900) Vitis vinifera contig VV78X143598.12, whole genom...    50   0.042  1
(AC149489) Medicago truncatula chromosome 2 clone mth2-24b4,...    50   0.042  1
(DI060334) Chromosome 17q-Linked Prostate Cancer Susceptibil...    50   0.042  1
(DD017533) Diagnesis of risk for prostatic diseases by novel...    50   0.042  1
(BD231475) Chromosome 17q-linked prostate cancer susceptibil...    50   0.042  1
(AR631340) Sequence 28 from patent US 6844189.                     50   0.042  1
(AE014843) Plasmodium falciparum 3D7 chromosome 11 section 8...    50   0.042  1
(AL161422) Human DNA sequence from clone RP11-168G12 on chro...    50   0.042  1
(AK094333) Homo sapiens cDNA FLJ37014 fis, clone BRACE201020...    50   0.042  1
(AC006077) Homo sapiens chromosome 5, P1 clone 254f11 (LBNL ...    50   0.042  1
(AC005277) Homo sapiens chromosome 17, clone hRPK.597_M_12, ...    50   0.042  1
(AC127476) Felis catus clone RP86-135C5, WORKING DRAFT SEQUE...    50   0.042  1
(AC107923) Homo sapiens chromosome 17 clone RP11-345F3 map 1...    50   0.042  1
(CU062541) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    50   0.042  1
(AC174425) Felis catus clone RP86-221G12, WORKING DRAFT SEQU...    50   0.042  1
(AC009008) Homo sapiens chromosome 5 clone XXp1-1130G3, WORK...    50   0.042  1
(AQ628682) RPCI-11-483K12.TJ RPCI-11 Homo sapiens genomic cl...    50   0.042  1
(AQ628676) RPCI-11-483K8.TJ RPCI-11 Homo sapiens genomic clo...    50   0.042  1
(DA061617) Homo sapiens cDNA clone BRACE2010203, 5' end, mRN...    50   0.042  1
(CA427635) UI-H-DF0-beo-k-12-0-UI.s1 NCI_CGAP_DF0 Homo sapie...    50   0.042  1
(CR589882) Zebrafish DNA sequence from clone CH211-221N23 in...    48   0.17   1
(CR376803) Zebrafish DNA sequence from clone DKEY-222P3 in l...    48   0.17   1
(BX927109) Zebrafish DNA sequence from clone CH211-80D23 in ...    48   0.17   1
(BX004881) Zebrafish DNA sequence from clone CH211-141M16 in...    48   0.17   1
(AL808129) Zebrafish DNA sequence from clone CH211-255F14 in...    48   0.17   1
(BV392030) S243P698FB7.T0 CaliforniaCoyote Canis latrans STS...    48   0.17   1
(CT025625) Mouse DNA sequence from clone RP23-449N15 on chro...    48   0.17   1
(AC154720) Mus musculus BAC clone RP24-371C21 from chromosom...    48   0.17   1
(AM460138) Vitis vinifera contig VV78X196869.14, whole genom...    48   0.17   1
(AM444481) Vitis vinifera contig VV78X254038.4, whole genome...    48   0.17   1
(EA739474) Sequence 10920 from patent US 7368527.                  48   0.17   1
(EA737887) Sequence 9333 from patent US 7368527.                   48   0.17   1
(CR382401) Plasmodium falciparum chromosome 6, complete sequ...    48   0.17   1
(EU332857) Homo sapiens neuroblastoma RAS viral (v-ras) onco...    48   0.17   1
(AY428630) Homo sapiens neuroblastoma RAS viral (v-ras) onco...    48   0.17   1
(AL096773) Human DNA sequence from clone RP5-1000E10 on chro...    48   0.17   1
(AC135506) Homo sapiens chromosome 3 clone RP11-694I15, comp...    48   0.17   1
(AC104185) Homo sapiens chromosome 3 clone RP11-268J19, comp...    48   0.17   1
(AC008814) Homo sapiens chromosome 5 clone CTD-2117L12, comp...    48   0.17   1
(AC104311) Homo sapiens chromosome UNK clone RP11-804H15, **...    48   0.17   1
(CU633239) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.17   1
(CU329698) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    48   0.17   1
(CR376841) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    48   0.17   1
(AC222998) Bos taurus clone CH240-432G7, WORKING DRAFT SEQUE...    48   0.17   1
(AC025179) Homo sapiens chromosome 5 clone CTD-2174B5, WORKI...    48   0.17   1
(FH439091) CHO_OF4066xo22r1.ab1 CHO_OF4 Nicotiana tabacum ge...    48   0.17   1
(ED191361) AUAC-aam92b06.b1 Ascaris suum whole genome shotgu...    48   0.17   1
(DU894991) 415866 Tomato HindIII BAC Library Solanum lycoper...    48   0.17   1
(DU499169) 1098421115778 CHORI-243 Ovis aries genomic clone ...    48   0.17   1
(DU403433) 1098448288643 CHORI-243 Ovis aries genomic clone ...    48   0.17   1
(AJ227587) Ciona intestinalis genomic fragment, clone 9E4.         48   0.17   1
(CT179886) Sus scrofa genomic clone PigE-182A8, genomic surv...    48   0.17   1
(CL083593) ISB1-2B17_T7.1 ISB1 Xenopus (Silurana) tropicalis...    48   0.17   1
(CL070444) CH216-118O18_RM1.1 CH216 Xenopus (Silurana) tropi...    48   0.17   1
(AG346458) Mus musculus molossinus DNA, clone:MSMg01-141K04....    48   0.17   1
(EH014123) USDA-FP_186855 Lysiphlebus testaceipes adult whol...    48   0.17   1
(CV054746) BNEL112h11 Barley EST endosperm library Hordeum v...    48   0.17   1
(CA243097) SCSFFL3092G06.b Saccharum officinarum FL3 Sacchar...    48   0.17   1
(BX511115) Zebrafish DNA sequence from clone CH211-101B18 in...    42   0.42   2
(AC209449) Macaca mulatta clone CH250-109I4, WORKING DRAFT S...    42   0.46   2
(CU076078) Zebrafish DNA sequence from clone CH73-309L7 in l...    46   0.65   1
(CR762486) Zebrafish DNA sequence from clone DKEY-264O9 in l...    46   0.65   1
(CR388123) Zebrafish DNA sequence from clone CH211-158E10 in...    46   0.65   1
(BX908797) Zebrafish DNA sequence from clone DKEY-43P13 in l...    46   0.65   1
(BX601645) Zebrafish DNA sequence from clone CH211-207J7 in ...    46   0.65   1
(BX547935) Zebrafish DNA sequence from clone CH211-207C1 in ...    46   0.65   1
(BX546488) Zebrafish DNA sequence from clone RP71-7A17 in li...    46   0.65   1
(BX255896) Zebrafish DNA sequence from clone CH211-249O11 in...    46   0.65   1
(BX088694) Zebrafish DNA sequence from clone CH211-193C2 in ...    46   0.65   1
(AL935322) Zebrafish DNA sequence from clone CH211-239B20 in...    46   0.65   1
(BV362440) S231P6547RE5.T0 BedlingtonTerrier Canis familiari...    46   0.65   1
(BV258716) S235P6265FH5.T0 ItalianGreyhound Canis familiaris...    46   0.65   1
(BV258272) S235P6198FF7.T0 ItalianGreyhound Canis familiaris...    46   0.65   1
(BV255857) S235P6319RD12.T0 ItalianGreyhound Canis familiari...    46   0.65   1
(CU467494) Mouse DNA sequence from clone RP24-118O5 on chrom...    46   0.65   1
(BX005446) Mouse DNA sequence from clone RP23-20G23 on chrom...    46   0.65   1
(AL929144) Mouse DNA sequence from clone RP23-441D24 on chro...    46   0.65   1
(AF111103) Mouse major histocompatibility complex region con...    46   0.65   1
(AC170878) Mus musculus BAC clone RP24-226F17 from chromosom...    46   0.65   1
(AC154873) Mus musculus chromosome 1, clone RP23-71J17, comp...    46   0.65   1
(AC154313) Mus musculus BAC clone RP23-354M21 from chromosom...    46   0.65   1
(AC149084) Mus musculus BAC clone RP23-173A12 from chromosom...    46   0.65   1
(AC145549) Mus musculus BAC clone RP23-21M23 from chromosome...    46   0.65   1
(AC132957) Mus musculus BAC clone RP23-149E9 from chromosome...    46   0.65   1
(AC131651) Mus musculus BAC clone RP24-98G17 from chromosome...    46   0.65   1
(AC122002) Mus musculus BAC clone RP24-335H15 from 7, comple...    46   0.65   1
(AC117778) Mus musculus chromosome 1, clone RP24-540L1, comp...    46   0.65   1
(AC116573) Mus musculus BAC clone RP23-114E15 from chromosom...    46   0.65   1
(AC116119) Mus musculus chromosome 12, clone RP23-76D19, com...    46   0.65   1
(AC100322) Mus musculus chromosome 7, clone RP23-124O24, com...    46   0.65   1
(BS000561) Pan troglodytes chromosome Y clone:PTB-495J17, co...    46   0.65   1
(BS000532) Pan troglodytes chromosome Y clone:PTB-056N15, co...    46   0.65   1
(AC210126) Macaca mulatta  BAC CH250-213E5 (Children's Hospi...    46   0.65   1

>(AU262073) Dictyostelium discoideum vegetative cDNA clone:VSB527,
           3' end single read.
          Length = 286

 Score = 54.0 bits (27), Expect(3) = 3e-16
 Identities = 27/27 (100%)
 Strand = Plus / Plus


Query: 226 aatcattttattttttatttttttttg 252
           |||||||||||||||||||||||||||
Sbjct: 226 aatcattttattttttatttttttttg 252

 Score = 52.0 bits (26), Expect(3) = 3e-16
 Identities = 26/26 (100%)
 Strand = Plus / Plus


Query: 177 catactcaaccaagcattaaaatgta 202
           ||||||||||||||||||||||||||
Sbjct: 177 catactcaaccaagcattaaaatgta 202

 Score = 32.2 bits (16), Expect(3) = 3e-16
 Identities = 16/16 (100%)
 Strand = Plus / Plus


Query: 1  gataggaatattctct 16
          ||||||||||||||||
Sbjct: 1  gataggaatattctct 16

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 284,392,937
Number of extensions: 23518448
Number of successful extensions: 4717856
Number of sequences better than 10.0: 3253
Length of query: 285
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 262
Effective length of database: 93,106,754,628
Effective search space: 24393969712536
Effective search space used: 24393969712536
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
protein update 2009. 6.21
Homology vs Protein 
Query= Contig-U06379-1 (Contig-U06379-1Q) /CSM_Contig/Contig-U06379-1Q.Seq.d
         (285 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

 ***** No hits found ******

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 118,828,321
Number of extensions: 725853
Number of successful extensions: 1523
Number of sequences better than 10.0: 0
Number of HSP's gapped: 1229
Number of HSP's successfully gapped: 0
Length of query: 95
Length of database: 1,040,966,779
Length adjustment: 64
Effective length of query: 31
Effective length of database: 835,892,539
Effective search space: 25912668709
Effective search space used: 25912668709
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 28 (15.4 bits)
PSORT 

 psg: 1.01  gvh: 0.44  alm: 0.30  top: 0.67  tms: 0.07  mit: 0.30  mip: 0.00
 nuc: 0.24  erl: 0.00  erm: 0.80  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.12  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 1.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 28.0 %: cytoplasmic
	 24.0 %: mitochondrial
	 24.0 %: nuclear
	  8.0 %: plasma membrane
	  8.0 %: endoplasmic reticulum
	  4.0 %: vesicles of secretory system
	  4.0 %: peroxisomal

>> prediction for Contig-U06379-1 is cyt
VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0