Contig-U01295-1
Contig ID Contig-U01295-1
Contig update 2001. 8.29
Contig sequence
>Contig-U01295-1 (Contig-U01295-1Q) /CSM_Contig/Contig-U01295-1Q.Seq.d
AAACAAAACTTGGTTCAACATTGGAATCAGAACTACAAGCATTGAATCAA
TTGTATAGTCAAACTATTTTAGAACCAAATCAACTTTGTAAATTGGATAT
TTTATTACAAGATGTTTCAATTCAATTGAAACAACTTCATCTCTATCAAA
TGGAATTAAACTATGGTTATGGATCGAATGAACCATTCCCAGCAACGCTG
GTAATCATTAAACAACCATTCCCAATGGTAATTAGTAAATTTAAACAATT
ACAAGAGGATCATCTTTGTGTTCAATTATTGACAGGTGCAAATGTTGAAA
TTGTTTCTTATTCACCCGATTAGAGCAGAGTTGGTATTTCATTCAAAGAA
TTTAA----------TTCAACACTTTGGCAAAATGGTTTCATTTTTATGT
TTTTAAAAAGAGATGTTGTAACTCAAATCTTAAAGAATCAAGATGTTGGT
ACTTTTGTTATTCTCTTTTCTGAAGCTTTCCCTGGTCAATTGGAAATTTC
ATATGTTGGTACTGATCAAAAAGATTCACTTTCAAAGAGTTCTAATGATT
TACAATCTCCAACCACAACCACAACAACAACAACTTCAACTAGAGTTAAA
CATTATTTAGTTCAAGCAAATGATACTTCTGGTTCAAAAAGAACTTTACC
CGATTTTTTAAGTGAATGTAATCAATTTACTCATATTTTACAATTAAACA
TAGCAATGATCCCTCAAACTGAAACTATTCCAGTATTTAAACGAGAACCT
AAAAATGTTGTATTGGAACCATATTACAGTAAAAGACAAAATTCCCAAAA
TATACTTGGAAGTGGTTATGATCCTTTATTTTAAACCGAATTTTAAATCA
AATTTTCCAAAATACACACACACAACATCCCATTTAG

Gap gap included
Contig length 877
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 1830141
End point 1829352
Strand (PLUS/MINUS) MINUS
Number of clones 3
Number of EST 4
Link to clone list U01295
List of clone(s)

est1=SLF293F,1,200
est2=AFC501F,32,356
est3=SLF293Z,357,878
est4=SSL556Z,694,879
Translated Amino Acid sequence
kqnlvqhwnqnykh*incivklf*nqinfvnwifyykmfqfn*nnfisikwn*tmvmdrm
nhsqqrw*slnnhsqw*lvnlnnykriifvfny*QVQMLKLFLIHPIRAELVFHSKNL--
-

---STLWQNGFIFMFLKRDVVTQILKNQDVGTFVILFSEAFPGQLEISYVGTDQKDSLSK
SSNDLQSPTTTTTTTTSTRVKHYLVQANDTSGSKRTLPDFLSECNQFTHILQLNIAMIPQ
TETIPVFKREPKNVVLEPYYSKRQNSQNILGSGYDPLF*tef*ikfskihthnipf


Translated Amino Acid sequence (All Frames)
Frame A:
kqnlvqhwnqnykh*incivklf*nqinfvnwifyykmfqfn*nnfisikwn*tmvmdrm
nhsqqrw*slnnhsqw*lvnlnnykriifvfny*QVQMLKLFLIHPIRAELVFHSKNL--
-

---fntlakwfhfyvfkkrccnsnlkesrcwyfcyslf*sfpwsignficwy*skrftfk
ef**ftisnhnhnnnnfn*s*tlfsssk*yfwfkknftrffk*m*siysyftikhsndps
n*nyssi*trt*kccigtilq*ktkfpkytwkwl*sfilnrilnqifqnthtqhpi*

Frame B:
nktwfnigirttsiesiv*snyfrtkstl*igyfitrcfnsiettsslsngiklwlwie*
tipsnagnh*ttipngn**i*titrgsslcsiidrckc*ncflftrleqswyfiqri*--
-

---STLWQNGFIFMFLKRDVVTQILKNQDVGTFVILFSEAFPGQLEISYVGTDQKDSLSK
SSNDLQSPTTTTTTTTSTRVKHYLVQANDTSGSKRTLPDFLSECNQFTHILQLNIAMIPQ
TETIPVFKREPKNVVLEPYYSKRQNSQNILGSGYDPLF*tef*ikfskihthnipf

Frame C:
tklgstleselqalnqlysqtilepnqlckldillqdvsiqlkqlhlyqmelnygygsne
pfpatlviikqpfpmviskfkqlqedhlcvqlltganveivsyspd*srvgisfkef---

---qhfgkmvsflcf*keml*lks*rikmlvlllfsflklslvnwkfhmlvlikkihfqr
vlmiynlqpqpqqqqlqlelnii*fkqmillvqkelypif*vnvinllifyn*t*q*slk
lklfqylnenlkmlywnhitvkdkipkiylevvmilyfkpnfksnfpkythttshl

own update 2004. 6. 7
Homology vs CSM-cDNA
Query= Contig-U01295-1 (Contig-U01295-1Q)
/CSM_Contig/Contig-U01295-1Q.Seq.d
(887 letters)

Database: CSM
8361 sequences; 7,895,291 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U01295-1 (Contig-U01295-1Q) /CSM_Contig/Conti... 1699 0.0
Contig-U13852-1 (Contig-U13852-1Q) /CSM_Contig/Conti... 50 6e-06
Contig-U12134-1 (Contig-U12134-1Q) /CSM_Contig/Conti... 50 6e-06
Contig-U12039-1 (Contig-U12039-1Q) /CSM_Contig/Conti... 50 6e-06
Contig-U10826-1 (Contig-U10826-1Q) /CSM_Contig/Conti... 50 6e-06
Contig-U05781-1 (Contig-U05781-1Q) /CSM_Contig/Conti... 50 6e-06
Contig-U02042-1 (Contig-U02042-1Q) /CSM_Contig/Conti... 50 6e-06
Contig-U11473-1 (Contig-U11473-1Q) /CSM_Contig/Conti... 48 2e-05
Contig-U11303-1 (Contig-U11303-1Q) /CSM_Contig/Conti... 48 2e-05
Contig-U10819-1 (Contig-U10819-1Q) /CSM_Contig/Conti... 48 2e-05

>Contig-U01295-1 (Contig-U01295-1Q) /CSM_Contig/Contig-U01295-1Q.Seq.d
Length = 887

Score = 1699 bits (857), Expect = 0.0
Identities = 887/887 (100%)
Strand = Plus / Plus


Query: 1 aaacaaaacttggttcaacattggaatcagaactacaagcattgaatcaattgtatagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaacaaaacttggttcaacattggaatcagaactacaagcattgaatcaattgtatagtc 60


Query: 61 aaactattttagaaccaaatcaactttgtaaattggatattttattacaagatgtttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaactattttagaaccaaatcaactttgtaaattggatattttattacaagatgtttcaa 120


Query: 121 ttcaattgaaacaacttcatctctatcaaatggaattaaactatggttatggatcgaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcaattgaaacaacttcatctctatcaaatggaattaaactatggttatggatcgaatg 180


Query: 181 aaccattcccagcaacgctggtaatcattaaacaaccattcccaatggtaattagtaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaccattcccagcaacgctggtaatcattaaacaaccattcccaatggtaattagtaaat 240


Query: 241 ttaaacaattacaagaggatcatctttgtgttcaattattgacaggtgcaaatgttgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttaaacaattacaagaggatcatctttgtgttcaattattgacaggtgcaaatgttgaaa 300


Query: 301 ttgtttcttattcacccgattagagcagagttggtatttcattcaaagaatttaannnnn 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgtttcttattcacccgattagagcagagttggtatttcattcaaagaatttaannnnn 360


Query: 361 nnnnnttcaacactttggcaaaatggtttcatttttatgtttttaaaaagagatgttgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 nnnnnttcaacactttggcaaaatggtttcatttttatgtttttaaaaagagatgttgta 420


Query: 421 actcaaatcttaaagaatcaagatgttggtacttttgttattctcttttctgaagctttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 actcaaatcttaaagaatcaagatgttggtacttttgttattctcttttctgaagctttc 480


Query: 481 cctggtcaattggaaatttcatatgttggtactgatcaaaaagattcactttcaaagagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cctggtcaattggaaatttcatatgttggtactgatcaaaaagattcactttcaaagagt 540


Query: 541 tctaatgatttacaatctccaaccacaaccacaacaacaacaacttcaactagagttaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctaatgatttacaatctccaaccacaaccacaacaacaacaacttcaactagagttaaa 600


Query: 601 cattatttagttcaagcaaatgatacttctggttcaaaaagaactttacccgatttttta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cattatttagttcaagcaaatgatacttctggttcaaaaagaactttacccgatttttta 660


Query: 661 agtgaatgtaatcaatttactcatattttacaattaaacatagcaatgatccctcaaact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agtgaatgtaatcaatttactcatattttacaattaaacatagcaatgatccctcaaact 720


Query: 721 gaaactattccagtatttaaacgagaacctaaaaatgttgtattggaaccatattacagt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gaaactattccagtatttaaacgagaacctaaaaatgttgtattggaaccatattacagt 780


Query: 781 aaaagacaaaattcccaaaatatacttggaagtggttatgatcctttattttaaaccgaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 aaaagacaaaattcccaaaatatacttggaagtggttatgatcctttattttaaaccgaa 840


Query: 841 ttttaaatcaaattttccaaaatacacacacacaacatcccatttag 887
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ttttaaatcaaattttccaaaatacacacacacaacatcccatttag 887


>Contig-U13852-1 (Contig-U13852-1Q) /CSM_Contig/Contig-U13852-1Q.Seq.d
Length = 1299

Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||||||||||||||||||||||||
Sbjct: 582 caaccacaaccacaacaacaacaac 606


Score = 44.1 bits (22), Expect = 4e-04
Identities = 25/26 (96%)
Strand = Plus / Plus


Query: 559 ccaaccacaaccacaacaacaacaac 584
|||||||||||||||||||| |||||
Sbjct: 629 ccaaccacaaccacaacaaccacaac 654


Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||||||||||||||| ||||||||
Sbjct: 576 caaccacaaccacaaccacaacaac 600


Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||||||||| ||||||||||||||
Sbjct: 201 caaccacaacaacaacaacaacaac 225


Score = 40.1 bits (20), Expect = 0.006
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 565 acaaccacaacaacaacaac 584
||||||||||||||||||||
Sbjct: 200 acaaccacaacaacaacaac 219


Score = 36.2 bits (18), Expect = 0.087
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaac 581
|||||||||||||||| |||||
Sbjct: 498 caaccacaaccacaaccacaac 519


Score = 36.2 bits (18), Expect = 0.087
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaac 581
|||||||||||||||| |||||
Sbjct: 558 caaccacaaccacaaccacaac 579


Score = 36.2 bits (18), Expect = 0.087
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaac 581
|||||||||||||||| |||||
Sbjct: 528 caaccacaaccacaaccacaac 549


Score = 36.2 bits (18), Expect = 0.087
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaac 581
|||||||||||||||| |||||
Sbjct: 510 caaccacaaccacaaccacaac 531


Score = 36.2 bits (18), Expect = 0.087
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaac 581
|||||||||||||||| |||||
Sbjct: 552 caaccacaaccacaaccacaac 573


Score = 36.2 bits (18), Expect = 0.087
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaac 581
|||||||||||||||| |||||
Sbjct: 534 caaccacaaccacaaccacaac 555


Score = 36.2 bits (18), Expect = 0.087
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 562 accacaaccacaacaacaacaa 583
|||||||| |||||||||||||
Sbjct: 80 accacaacaacaacaacaacaa 101


Score = 36.2 bits (18), Expect = 0.087
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaac 581
|||||||||||||||| |||||
Sbjct: 522 caaccacaaccacaaccacaac 543


Score = 36.2 bits (18), Expect = 0.087
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaac 581
|||||||||||||||| |||||
Sbjct: 546 caaccacaaccacaaccacaac 567


Score = 36.2 bits (18), Expect = 0.087
Identities = 24/26 (92%)
Strand = Plus / Plus


Query: 559 ccaaccacaaccacaacaacaacaac 584
||||| ||||| ||||||||||||||
Sbjct: 701 ccaacaacaacaacaacaacaacaac 726


Score = 36.2 bits (18), Expect = 0.087
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaac 581
|||||||||||||||| |||||
Sbjct: 504 caaccacaaccacaaccacaac 525


Score = 36.2 bits (18), Expect = 0.087
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaac 581
|||||||||||||||| |||||
Sbjct: 564 caaccacaaccacaaccacaac 585


Score = 36.2 bits (18), Expect = 0.087
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaac 581
|||||||||||||||| |||||
Sbjct: 570 caaccacaaccacaaccacaac 591


Score = 36.2 bits (18), Expect = 0.087
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaac 581
|||||||||||||||| |||||
Sbjct: 540 caaccacaaccacaaccacaac 561


Score = 36.2 bits (18), Expect = 0.087
Identities = 21/22 (95%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaac 581
|||||||||||||||| |||||
Sbjct: 516 caaccacaaccacaaccacaac 537


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 231 caacaacaacaacaacaacaacaac 255


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 222 caacaacaacaacaacaacaacaac 246


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 240 caacaacaacaacaacaacaacaac 264


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 207 caacaacaacaacaacaacaacaac 231


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 216 caacaacaacaacaacaacaacaac 240


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 213 caacaacaacaacaacaacaacaac 237


Score = 34.2 bits (17), Expect = 0.34
Identities = 17/17 (100%)
Strand = Plus / Plus


Query: 568 accacaacaacaacaac 584
|||||||||||||||||
Sbjct: 80 accacaacaacaacaac 96


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 9 caacaacaacaacaacaacaacaac 33


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 225 caacaacaacaacaacaacaacaac 249


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 210 caacaacaacaacaacaacaacaac 234


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 234 caacaacaacaacaacaacaacaac 258


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 3 caacaacaacaacaacaacaacaac 27


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 243 caacaacaacaacaacaacaacaac 267


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 15 caacaacaacaacaacaacaacaac 39


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 219 caacaacaacaacaacaacaacaac 243


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 228 caacaacaacaacaacaacaacaac 252


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 705 caacaacaacaacaacaacaacaac 729


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 12 caacaacaacaacaacaacaacaac 36


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 6 caacaacaacaacaacaacaacaac 30


Score = 34.2 bits (17), Expect = 0.34
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaac 584
|||| ||||| ||||||||||||||
Sbjct: 237 caacaacaacaacaacaacaacaac 261


Score = 32.2 bits (16), Expect = 1.4
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 565 acaaccacaacaacaacaac 584
|||||||||||||| |||||
Sbjct: 644 acaaccacaacaacgacaac 663


Score = 32.2 bits (16), Expect = 1.4
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 565 acaaccacaacaacaacaac 584
||||| ||||||||||||||
Sbjct: 2 acaacaacaacaacaacaac 21


Score = 32.2 bits (16), Expect = 1.4
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 568 accacaacaacaacaa 583
||||||||||||||||
Sbjct: 62 accacaacaacaacaa 77


Score = 32.2 bits (16), Expect = 1.4
Identities = 22/24 (91%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaa 583
|||| ||||| |||||||||||||
Sbjct: 18 caacaacaacaacaacaacaacaa 41


Score = 32.2 bits (16), Expect = 1.4
Identities = 22/24 (91%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaacaa 583
|||| ||||| |||||||||||||
Sbjct: 708 caacaacaacaacaacaacaacaa 731


Score = 30.2 bits (15), Expect = 5.4
Identities = 21/23 (91%)
Strand = Plus / Plus


Query: 562 accacaaccacaacaacaacaac 584
|||||||| || |||||||||||
Sbjct: 194 accacaacaaccacaacaacaac 216


Score = 30.2 bits (15), Expect = 5.4
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 565 acaaccacaacaacaacaa 583
||||| |||||||||||||
Sbjct: 401 acaacaacaacaacaacaa 419


Score = 30.2 bits (15), Expect = 5.4
Identities = 18/19 (94%)
Strand = Plus / Plus


Query: 566 caaccacaacaacaacaac 584
|||| ||||||||||||||
Sbjct: 399 caacaacaacaacaacaac 417


Score = 30.2 bits (15), Expect = 5.4
Identities = 21/23 (91%)
Strand = Plus / Plus


Query: 560 caaccacaaccacaacaacaaca 582
|||| ||||| ||||||||||||
Sbjct: 246 caacaacaacaacaacaacaaca 268


Score = 30.2 bits (15), Expect = 5.4
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 570 cacaacaacaacaac 584
|||||||||||||||
Sbjct: 808 cacaacaacaacaac 822


>Contig-U12134-1 (Contig-U12134-1Q) /CSM_Contig/Contig-U12134-1Q.Seq.d
Length = 2911

Score = 50.1 bits (25), Expect = 6e-06
Identities = 25/25 (100%)
Strand = Plus / Minus


Query: 560 caaccacaaccacaacaacaacaac 584
|||||||||||||||||||||||||
Sbjct: 707 caaccacaaccacaacaacaacaac 683


Score = 42.1 bits (21), Expect = 0.001
Identities = 24/25 (96%)
Strand = Plus / Minus


Query: 560 caaccacaaccacaacaacaacaac 584
|||||||||| ||||||||||||||
Sbjct: 701 caaccacaacaacaacaacaacaac 677


Score = 32.2 bits (16), Expect = 1.4
Identities = 19/20 (95%)
Strand = Plus / Minus


Query: 565 acaaccacaacaacaacaac 584
||||||||||| ||||||||
Sbjct: 708 acaaccacaaccacaacaac 689


Database: CSM
Posted date: Jun 7, 2004 8:33 AM
Number of letters in database: 7,895,291
Number of sequences in database: 8361

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 29,661
Number of Sequences: 8361
Number of extensions: 29661
Number of successful extensions: 10981
Number of sequences better than 10.0: 1096
length of query: 887
length of database: 7,895,291
effective HSP length: 16
effective length of query: 871
effective length of database: 7,761,515
effective search space: 6760279565
effective search space used: 6760279565
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 4.26
Homology vs DNA
Query= Contig-U01295-1 (Contig-U01295-1Q) /CSM_Contig/Contig-U01295-1Q.Seq.d
(887 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AJ581661) Dictyostelium discoideum partial dstB gene for Dd... 930 0.0 3
(AU052902) Dictyostelium discoideum slug cDNA, clone SLF293. 737 0.0 2
(BJ324368) Dictyostelium discoideum cDNA clone:dda6a01, 5' e... 642 e-180 1
(AU061661) Dictyostelium discoideum slug cDNA, clone SLF293. 396 e-106 1
(AU038848) Dictyostelium discoideum slug cDNA, clone SSL556. 367 5e-97 1
(Y13097) Dictyostelium discoideum dstA mRNA for STATa protei... 48 2e-09 3
(AC008003) Drosophila melanogaster, chromosome 2L, region 24... 50 1e-04 2
(AC004371) Drosophila melanogaster DNA sequence (P1 DS06482 ... 50 1e-04 2
(AC018146) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 50 1e-04 2
(AF221506) Drosophila melanogaster scavenger receptor-like p... 50 1e-04 2
(CQ577553) Sequence 5311 from Patent WO0171042. 50 1e-04 2
(AY865064) Drosophila melanogaster strain 2CPA46 SR-CIII and... 50 1e-04 2
(AY865059) Drosophila melanogaster strain 2CPA1 nonfunctiona... 50 1e-04 2
(AY865065) Drosophila melanogaster strain 2CPA51 SR-CIII and... 50 1e-04 2
(AY865075) Drosophila melanogaster strain Zm37 SR-CIII and S... 50 1e-04 2
(AY865067) Drosophila melanogaster strain 2CPA105 SR-CIII an... 50 1e-04 2
(AY865066) Drosophila melanogaster strain 2CPA103 SR-CIII an... 50 1e-04 2
(AY865062) Drosophila melanogaster strain 2CPA14 SR-CIII and... 50 1e-04 2
(AY865061) Drosophila melanogaster strain 2CPA12 SR-CIII and... 50 1e-04 2
(AY865073) Drosophila melanogaster strain Zm11 SR-CIII and S... 50 1e-04 2
(AY865069) Drosophila melanogaster strain 2CPA122 SR-CIII an... 50 1e-04 2
(AY865063) Drosophila melanogaster strain 2CPA43 SR-CIII and... 50 1e-04 2
(AY865060) Drosophila melanogaster strain 2CPA7 SR-CIII and ... 50 1e-04 2
(AY865068) Drosophila melanogaster strain 2CPA118 SR-CIII an... 50 1e-04 2
(AY865070) Drosophila melanogaster strain 2CPA129 SR-CIII an... 50 1e-04 2
(AY865076) Drosophila melanogaster strain Zm42 SR-CIII and S... 50 1e-04 2
(AY865078) Drosophila melanogaster strain Zm96 SR-CIII and S... 50 1e-04 2
(AY865074) Drosophila melanogaster strain Zm22 SR-CIII and S... 50 1e-04 2
(AY865072) Drosophila melanogaster strain Zm10 nonfunctional... 50 1e-04 2
(AY864368) Drosophila melanogaster strain Mel6 scavenger rec... 50 1e-04 2
(AY864370) Drosophila melanogaster strain Mel8 scavenger rec... 50 1e-04 2
(AY864366) Drosophila melanogaster strain Mel4 scavenger rec... 50 1e-04 2
(AY864365) Drosophila melanogaster strain Mel3 scavenger rec... 50 1e-04 2
(AY864364) Drosophila melanogaster strain Mel2 scavenger rec... 50 1e-04 2
(AY864363) Drosophila melanogaster strain Mel1 scavenger rec... 50 1e-04 2
(AY864369) Drosophila melanogaster strain Mel7 scavenger rec... 50 1e-04 2
(AY864367) Drosophila melanogaster strain Mel5 scavenger rec... 50 1e-04 2
(AY349704) Drosophila melanogaster strain Mel5 Sr-CI gene, p... 50 1e-04 2
(AY349703) Drosophila melanogaster strain Mel4 Sr-CI gene, p... 50 1e-04 2
(AY349702) Drosophila melanogaster strain Mel3 Sr-CI gene, p... 50 1e-04 2
(AY349701) Drosophila melanogaster strain Mel2 Sr-CI gene, p... 50 1e-04 2
(AY349700) Drosophila melanogaster strain Mel1 Sr-CI gene, p... 50 1e-04 2
(CQ577554) Sequence 5312 from Patent WO0171042. 50 1e-04 2
(AR907772) Sequence 5 from patent US 7078511. 50 1e-04 2
(AR222274) Sequence 5 from patent US 6429289. 50 1e-04 2
(AR195309) Sequence 5 from patent US 6350859. 50 1e-04 2
(U17693) Drosophila melanogaster macrophage-specific scaveng... 50 1e-04 2
(BT023208) Drosophila melanogaster IP03002 full insert cDNA. 50 1e-04 2
(BT023236) Drosophila melanogaster IP02802 full insert cDNA. 50 1e-04 2
(EL870730) IP02802.3prime IP Drosophila melanogaster iPCR Am... 50 1e-04 2
(EL870880) IP03002.3prime IP Drosophila melanogaster iPCR Am... 50 1e-04 2
(FI429916) CH322-162B15.y CHORI-322 Drosophila melanogaster ... 50 1e-04 2
(FI426773) CH322-158J20.y CHORI-322 Drosophila melanogaster ... 50 2e-04 2
(BJ407968) Dictyostelium discoideum cDNA clone:dds44b09, 3' ... 50 0.001 2
(AC095568) Rattus norvegicus clone CH230-7O18, *** SEQUENCIN... 50 0.005 6
(BJ402149) Dictyostelium discoideum cDNA clone:dds20k16, 3' ... 48 0.006 2
(BJ445333) Dictyostelium discoideum cDNA clone:ddv59l06, 3' ... 48 0.006 2
(BJ378261) Dictyostelium discoideum cDNA clone:ddc31g12, 3' ... 48 0.006 2
(BJ381119) Dictyostelium discoideum cDNA clone:ddc40m12, 3' ... 48 0.007 2
(BJ401316) Dictyostelium discoideum cDNA clone:dds22i22, 3' ... 48 0.008 2
(DQ120961) Hucho taimen clone ZB-12 microsatellite sequence. 54 0.009 1
(AR544922) Sequence 53 from patent US 6747137. 54 0.009 1
(FE800230) CCAG23107.b1 CCAG Petrolisthes cinctipes heart, g... 54 0.009 1
(BJ408238) Dictyostelium discoideum cDNA clone:dds45m01, 3' ... 48 0.021 2
(BX537341) Zebrafish DNA sequence from clone CH211-103C12 in... 38 0.024 2
(CT583715) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 0.024 2
(BX004799) Zebrafish DNA sequence from clone CH211-176M18 in... 38 0.024 2
(CR450822) Zebrafish DNA sequence from clone CH211-149B12 in... 36 0.025 2
(AZ099263) RPCI-23-480C5.TJ RPCI-23 Mus musculus genomic clo... 42 0.028 2
(AY865090) Drosophila simulans strain Zs6 SR-CIII and SR-CI ... 42 0.028 2
(AY865087) Drosophila simulans strain Zs9 SR-CIII and SR-CI ... 42 0.028 2
(AY865091) Drosophila simulans strain Zs7 SR-CIII and SR-CI ... 42 0.028 2
(AY865093) Drosophila simulans strain Zs19 SR-CIII and SR-CI... 42 0.028 2
(AY865092) Drosophila simulans strain Zs17 SR-CIII and SR-CI... 42 0.028 2
(AY865077) Drosophila melanogaster strain Zm53 SR-CIII and S... 42 0.028 2
(AY864534) Drosophila simulans strain ZIM-3 scavenger recept... 42 0.029 2
(AY864531) Drosophila simulans strain TX-12 scavenger recept... 42 0.029 2
(AY864529) Drosophila simulans strain TX-10 scavenger recept... 42 0.029 2
(AY864522) Drosophila simulans strain TX-2 scavenger recepto... 42 0.029 2
(AY864517) Drosophila simulans strain CA2-4 scavenger recept... 42 0.029 2
(AY864535) Drosophila simulans strain ZIM-4 scavenger recept... 42 0.029 2
(AY864536) Drosophila simulans strain ZIM-6 scavenger recept... 42 0.029 2
(AY864540) Drosophila simulans strain ZIM-10 scavenger recep... 42 0.029 2
(AY864539) Drosophila simulans strain ZIM-9 scavenger recept... 42 0.029 2
(CK809428) Rasgsc3001 Salivary Gland 4th instar 3rd period (... 48 0.031 2
(BV050574) S212P6379FF6.T0 CZECHII/Ei Mus musculus STS genom... 52 0.037 1
(AL596183) Mouse DNA sequence from clone RP23-286B12 on chro... 52 0.037 1
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 52 0.037 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 52 0.037 1
(DE833207) Monosiga ovata DNA, BAC clone: MOBS-009C12_R, 3'end. 52 0.037 1
(EH711398) CNML11022.b1_K20.ab1 CNM(LMS) spotted knapweed Ce... 52 0.037 1
(EB501492) 1099435333232 12-DrosW-norm-1P5Kb Drosophila will... 52 0.037 1
(CV617028) zcn27b02.x2 F_HC7CDNA Ajellomyces capsulatus cDNA... 52 0.037 1
(CO553818) SY_MF_01_H11 SY_MF Senecio chrysanthemifolius cDN... 52 0.037 1
(CK813765) Rasgsc3703 Salivary Gland 4th instar 3rd period (... 52 0.037 1
(CK812441) Rasgsc0983 Salivary Gland 4th instar 3rd period (... 52 0.037 1
(CK812429) Rasgsc0958 Salivary Gland 4th instar 3rd period (... 52 0.037 1
(GH090642) G993P19RK13.T0 Neurospora crassa cDNA - 1 hour Gl... 52 0.037 1
(GE922635) G1176P110RN8.T0 Neurospora crassa cDNA - 1 hour O... 52 0.037 1
(FE356335) CBNN14929.fwd CBNN_Daphnia_pulex_Chosen_One_Libra... 52 0.037 1
(EY333538) CAWY5758.fwd CAWY Helobdella robusta Subtracted E... 52 0.037 1
(AC178780) Strongylocentrotus purpuratus clone R3-21D19, WOR... 32 0.040 8
(BX548246) Zebrafish DNA sequence from clone CH211-274P15 in... 46 0.048 4
(AC160243) Mus musculus chromosome 8, clone RP24-130G22, com... 38 0.055 8
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ... 40 0.069 8
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 42 0.071 6
(AC140909) Homo sapiens chromosome 16 clone RP11-994N8, WORK... 48 0.079 4
(BX571983) Zebrafish DNA sequence from clone DKEY-18M7 in li... 40 0.081 8
(FM992691) Candida dubliniensis CD36 chromosome 4, complete ... 50 0.090 5
(CR759955) Zebrafish DNA sequence from clone DKEY-269G4 in l... 34 0.11 7
(AL050331) Human DNA sequence from clone RP3-486I3 on chromo... 38 0.11 6
(AC109907) Rattus norvegicus clone CH230-32I14, *** SEQUENCI... 50 0.11 4
(EC327968) GUTF089831N23 POSSUM_01-POSSUM-GUT-2KB Trichosuru... 48 0.11 2
(CZ282950) cp27b11.r Candida parapsilosis Random Genomic Lib... 38 0.11 2
(CK815437) Rasgsc6937 Salivary Gland 4th instar 3rd period (... 48 0.11 2
(EC821960) SME00002656 esmbsro2 Sawyeria marylandensis cDNA,... 38 0.11 2
(EG627824) EMBRYOF088228H6 POSSUM_01-POSSUM-C-EMBRYO-2KB Tri... 48 0.13 2
(AC026111) Homo sapiens 12 BAC RP11-603K19 (Roswell Park Can... 34 0.13 5
(AC091415) Rattus norvegicus clone CH230-2C1, *** SEQUENCING... 50 0.13 7
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 38 0.14 7
(FG288127) 1108793259903 New World Screwworm Egg 9261 ESTs C... 40 0.14 2
(DQ855586) Poecilia reticulata clone g133 microsatellite seq... 50 0.15 1
(DQ120980) Hucho taimen clone ZB-35 microsatellite sequence. 50 0.15 1
(BV338517) S230P6466RH5.T0 Rottweiler Canis familiaris STS g... 50 0.15 1
(CT030663) Mouse DNA sequence from clone RP23-233E5 on chrom... 50 0.15 1
(AL844871) Mouse DNA sequence from clone RP23-271B15 on chro... 50 0.15 1
(AC168061) Mus musculus BAC clone RP23-199J14 from chromosom... 50 0.15 1
(AC158974) Mus musculus chromosome 15, clone RP24-252G18, co... 50 0.15 1
(AC154684) Mus musculus BAC clone RP23-143E1 from 12, comple... 50 0.15 1
(AC150285) Mus musculus BAC clone RP23-340J3 from 12, comple... 50 0.15 1
(AC125274) Mus musculus chromosome 15, clone RP24-157F9, com... 50 0.15 1
(AC123977) Mus musculus strain C57BL/6J clone rp23-81d13 map... 50 0.15 1
(AC122519) Mus musculus BAC clone RP24-462C10 from chromosom... 50 0.15 1
(AC115039) Mus musculus chromosome 6, clone RP24-279C2, comp... 50 0.15 1
(AC111654) Rattus norvegicus Chr BAC CH230-108G17 (Children'... 50 0.15 1
(AC110378) Mus musculus BAC clone RP24-193H8 from 6, complet... 50 0.15 1
(AC090977) Mus musculus strain C57BL/6J clone rp23-213m14 ma... 50 0.15 1
(AC084384) Mus musculus BAC clone RP23-24F24 from 15, comple... 50 0.15 1
(Y11565) N.crassa acu-15 gene. 50 0.15 1
(FM992689) Candida dubliniensis CD36 chromosome 2, complete ... 50 0.15 1
(AM468626) Vitis vinifera contig VV78X207150.8, whole genome... 50 0.15 1
(AM269963) Aspergillus niger contig An01c0160, complete genome. 50 0.15 1
(AL670542) Neurospora crassa DNA linkage group V cosmid cont... 50 0.15 1
(FB676004) Sequence 7 from Patent WO2007118704. 50 0.15 1
(EA248511) Sequence 19 from patent US 7229784. 50 0.15 1
(AX684698) Sequence 17 from Patent WO0224865. 50 0.15 1
(EU088395) Trypanosoma cruzi strain CL Brener clone B2 minic... 50 0.15 1
(AJ748041) Trypanosoma cruzi kinetoplast minicircle, lineage... 50 0.15 1
(AF117611) Dictyostelium discoideum DosA protein (dosA) gene... 50 0.15 1
(AE014134) Drosophila melanogaster chromosome 2L, complete s... 50 0.15 1
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 50 0.15 1
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 50 0.15 1
(AC115607) Dictyostelium discoideum chromosome 2 map 4559693... 50 0.15 1
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 50 0.15 1
(AC114261) Dictyostelium discoideum chromosome 2 map 126059-... 50 0.15 1
(AC138811) Homo sapiens chromosome 16 clone RP11-1035H13, co... 50 0.15 1
(AC026472) Homo sapiens chromosome 16 clone RP11-511J24, com... 50 0.15 1
(AC025289) Homo sapiens chromosome 16 clone RP11-533D19, com... 50 0.15 1
(AC010373) Homo sapiens chromosome 16 clone CTD-2053O6, comp... 50 0.15 1
(AC007673) Homo sapiens, clone RP11-99A1, complete sequence. 50 0.15 1
(AC160589) Papio anubis clone RP41-354O23, WORKING DRAFT SEQ... 50 0.15 1
(AC151871) Lemur catta clone LB2-91K12, WORKING DRAFT SEQUEN... 50 0.15 1
(AC141601) Homo sapiens chromosome 16 clone RP11-1367O14, WO... 50 0.15 1
(AC141202) Rattus norvegicus clone CH230-394F22, WORKING DRA... 50 0.15 1
(AC140887) Homo sapiens chromosome 16 clone RP11-1370D11, WO... 50 0.15 1
(AC140872) Homo sapiens chromosome 16 clone RP11-1151K24, WO... 50 0.15 1
(AC140835) Homo sapiens chromosome 16 clone RP11-958I13, WOR... 50 0.15 1
(AC140713) Homo sapiens chromosome 16 clone RP11-1367K14, WO... 50 0.15 1
(AC139825) Homo sapiens chromosome 16 clone RP11-371L16, WOR... 50 0.15 1
(AC139820) Homo sapiens chromosome 16 clone RP11-150A14, WOR... 50 0.15 1
(AC139524) Homo sapiens chromosome 16 clone RP11-193O23, WOR... 50 0.15 1
(AC139469) Homo sapiens chromosome 16 clone RP11-283M20, WOR... 50 0.15 1
(AC139465) Homo sapiens chromosome 16 clone RP11-160K22, WOR... 50 0.15 1
(AC139461) Homo sapiens chromosome 16 clone RP11-109D4, WORK... 50 0.15 1
(AC136813) Rattus norvegicus clone CH230-102O15, *** SEQUENC... 50 0.15 1
(AC136617) Homo sapiens chromosome 16 clone RP11-452J18, WOR... 50 0.15 1
(AC133743) Rattus norvegicus clone CH230-182C23, *** SEQUENC... 50 0.15 1
(AC132754) Rattus norvegicus clone CH230-55N18, *** SEQUENCI... 50 0.15 1
(AC132694) Rattus norvegicus clone CH230-490C22, WORKING DRA... 50 0.15 1
(AC131439) Rattus norvegicus clone CH230-5G24, *** SEQUENCIN... 50 0.15 1
(AC130905) Rattus norvegicus clone CH230-166M24, *** SEQUENC... 50 0.15 1
(AC128815) Rattus norvegicus clone CH230-37G12, *** SEQUENCI... 50 0.15 1
(AC128004) Rattus norvegicus clone CH230-262L8, *** SEQUENCI... 50 0.15 1
(AC127735) Rattus norvegicus clone CH230-26C9, *** SEQUENCIN... 50 0.15 1
(AC127135) Rattus norvegicus clone CH230-89C20, *** SEQUENCI... 50 0.15 1
(AC126466) Rattus norvegicus clone CH230-34O4, *** SEQUENCIN... 50 0.15 1
(AC126201) Rattus norvegicus clone CH230-220N19, *** SEQUENC... 50 0.15 1
(AC124209) Rattus norvegicus clone CH230-270N19, *** SEQUENC... 50 0.15 1
(AC123197) Rattus norvegicus clone CH230-85B12, *** SEQUENCI... 50 0.15 1
(AC121678) Rattus norvegicus clone CH230-522N19, *** SEQUENC... 50 0.15 1
(AC121457) Rattus norvegicus clone CH230-146J5, *** SEQUENCI... 50 0.15 1
(AC118765) Rattus norvegicus clone CH230-86A14, *** SEQUENCI... 50 0.15 1
(AC118389) Rattus norvegicus clone CH230-84I18, *** SEQUENCI... 50 0.15 1
(AC118266) Mus musculus chromosome 15 clone RP24-85O18 map 1... 50 0.15 1
(AC117980) Rattus norvegicus clone CH230-253D23, WORKING DRA... 50 0.15 1
(AC115186) Rattus norvegicus clone CH230-152P11, *** SEQUENC... 50 0.15 1
(AC115160) Rattus norvegicus clone CH230-159J7, *** SEQUENCI... 50 0.15 1
(AC113874) Rattus norvegicus clone CH230-294B6, WORKING DRAF... 50 0.15 1
(AC111637) Rattus norvegicus chromosome 18 clone CH230-98F14... 50 0.15 1
(AC111583) Rattus norvegicus clone CH230-81I13, *** SEQUENCI... 50 0.15 1
(AC110363) Rattus norvegicus clone CH230-17A22, *** SEQUENCI... 50 0.15 1
(AC109415) Rattus norvegicus clone CH230-286E7, *** SEQUENCI... 50 0.15 1
(AC108557) Rattus norvegicus clone CH230-106J14, *** SEQUENC... 50 0.15 1
(AC106331) Rattus norvegicus clone CH230-230P11, WORKING DRA... 50 0.15 1
(AC106241) Rattus norvegicus clone CH230-97M22, *** SEQUENCI... 50 0.15 1
(AC105519) Rattus norvegicus clone CH230-23K8, *** SEQUENCIN... 50 0.15 1
(AC103069) Rattus norvegicus clone CH230-171I18, *** SEQUENC... 50 0.15 1
(AC099391) Rattus norvegicus clone CH230-153M11, WORKING DRA... 50 0.15 1
(AC099135) Rattus norvegicus clone CH230-69I13, *** SEQUENCI... 50 0.15 1
(AC099118) Rattus norvegicus clone CH230-16J12, *** SEQUENCI... 50 0.15 1
(AC098625) Rattus norvegicus clone CH230-120K9, *** SEQUENCI... 50 0.15 1
(AC097921) Rattus norvegicus clone CH230-48E24, *** SEQUENCI... 50 0.15 1
(AC097744) Rattus norvegicus clone CH230-11N4, WORKING DRAFT... 50 0.15 1
(AC095736) Rattus norvegicus clone CH230-9A23, *** SEQUENCIN... 50 0.15 1
(AC094779) Rattus norvegicus clone CH230-4O1, *** SEQUENCING... 50 0.15 1
(AC094631) Rattus norvegicus clone CH230-5D14, WORKING DRAFT... 50 0.15 1
(FP102153) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.15 1
(AC094502) Rattus norvegicus clone CH230-4E8, *** SEQUENCING... 50 0.15 1
(AC212606) Solanum lycopersicum chromosome 7 clone C07HBa000... 50 0.15 1
(AC180948) Strongylocentrotus purpuratus clone R3-3059H06, W... 50 0.15 1
(AC025802) Homo sapiens chromosome 1 clone RP11-646G24 map 1... 50 0.15 1
(AK244131) Glycine max cDNA, clone: GMFL01-02-C21. 50 0.15 1
(AZ476334) 1M0295E04F Mouse 10kb plasmid UUGC1M library Mus ... 50 0.15 1
(EJ396352) 1093012002517 Global-Ocean-Sampling_GS-28-01-01-1... 50 0.15 1
(EI858217) CAH1-16G4TV CAA1Ba Cicer arietinum genomic clone ... 50 0.15 1
(AL243197) Tetraodon nigroviridis genome survey sequence T7 ... 50 0.15 1
(AL202365) Tetraodon nigroviridis genome survey sequence T7 ... 50 0.15 1
(DH487008) Monosiga ovata DNA, fosmid clone: MOF-044H21, gen... 50 0.15 1
(DH464382) Monosiga ovata DNA, fosmid clone: MOF-005A02, gen... 50 0.15 1
(CR881405) Sus scrofa BES. 50 0.15 1
(AG754377) Macaca fuscata fuscata DNA, clone: MSB2-220O04_R,... 50 0.15 1
(CL325494) RPCI44_241F21.r RPCI-44 Sus scrofa genomic clone ... 50 0.15 1
(BZ517261) BOMRK88TR BO_2_3_KB Brassica oleracea genomic clo... 50 0.15 1
(BZ450879) BONBA74TR BO_1.6_2_KB_tot Brassica oleracea genom... 50 0.15 1
(EL419316) CHCL7689.b1_A03.ab1 CHC(LMS) Texas blueweed Helia... 50 0.15 1
(EE062925) C1G04719 Mixture of buds, little clusters and fru... 50 0.15 1
(EB571610) AGENCOURT_51104578 D. virilis EST Drosophila viri... 50 0.15 1
(EB564773) AGENCOURT_51356601 D. virilis EST Drosophila viri... 50 0.15 1
(EB562941) AGENCOURT_51908683 D. virilis EST Drosophila viri... 50 0.15 1
(EB561987) AGENCOURT_51198857 D. virilis EST Drosophila viri... 50 0.15 1
(EB561594) AGENCOURT_50987398 D. virilis EST Drosophila viri... 50 0.15 1
(EB559869) AGENCOURT_52044591 D. virilis EST Drosophila viri... 50 0.15 1
(EB559627) AGENCOURT_51103674 D. virilis EST Drosophila viri... 50 0.15 1
(EB558394) AGENCOURT_51803772 D. virilis EST Drosophila viri... 50 0.15 1
(EB558144) AGENCOURT_51871243 D. virilis EST Drosophila viri... 50 0.15 1
(EB557369) AGENCOURT_51105664 D. virilis EST Drosophila viri... 50 0.15 1
(EB196622) PEG001-C-004525-301 Non-Normalized Pedal-Pleural ... 50 0.15 1
(DT585091) yfi01-5ms4-g05 Yfi01 Yucca filamentosa cDNA clone... 50 0.15 1
(AU305330) Zinnia elegans cDNA, clone:Z14611. 50 0.15 1
(AU272171) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 50 0.15 1
(AU272170) Dictyostelium discoideum gamete cDNA clone:FC-IC1... 50 0.15 1
(DR951653) EST1143192 Aquilegia cDNA library Aquilegia formo... 50 0.15 1
(DR936516) EST1128055 Aquilegia cDNA library Aquilegia formo... 50 0.15 1
(DR929287) EST1120826 Aquilegia cDNA library Aquilegia formo... 50 0.15 1
(DN315987) PL06022B1B01 cDNA from juvenile hermaphodites Sch... 50 0.15 1
(DN309705) PL06005A2H03 cDNA from juvenile hermaphodites Sch... 50 0.15 1
(AU073842) Dictyostelium discoideum slug cDNA, clone SSI518. 50 0.15 1
(AU060875) Dictyostelium discoideum slug cDNA, clone SLB839. 50 0.15 1
(AU038821) Dictyostelium discoideum slug cDNA, clone SSL525. 50 0.15 1
(CU555691) Spc_26YI16 cDNA clone of Developmental Stages Lib... 50 0.15 1
(CF605814) RADIC01_001570 Grape Root pSPORT1 Library Vitis v... 50 0.15 1
(CD810743) 1496 Lingulodinium polyedrum Lingulodinium polyed... 50 0.15 1
(CB886937) Lice_02_G22_T3 Body louse cDNA library Pediculus ... 50 0.15 1
(CB294041) King-2_H08 Proterospongia_cDNA_1 Proterospongia s... 50 0.15 1
(BW651796) Glycine max cDNA clone: GMFL01-02-C21, 5'end. 50 0.15 1
(BQ875885) QGI9G10.yg.ab1 QG_ABCDI lettuce salinas Lactuca s... 50 0.15 1
(BQ793870) EST 2808 Veraison Grape berries Lambda Zap II Lib... 50 0.15 1
(BQ586973) E012352-024-011-P08-SP6 MPIZ-ADIS-024-leaf Beta v... 50 0.15 1
(BQ079763) san38a07.y1 Gm-c1084 Glycine max cDNA clone SOYBE... 50 0.15 1
(BJ444621) Dictyostelium discoideum cDNA clone:ddv56o22, 3' ... 50 0.15 1
(BJ437953) Dictyostelium discoideum cDNA clone:ddv35k23, 3' ... 50 0.15 1
(BJ429185) Dictyostelium discoideum cDNA clone:ddv2k16, 3' e... 50 0.15 1
(BJ407217) Dictyostelium discoideum cDNA clone:dds37h24, 3' ... 50 0.15 1
(BJ396927) Dictyostelium discoideum cDNA clone:dds44p12, 5' ... 50 0.15 1
(BJ392310) Dictyostelium discoideum cDNA clone:dds27m04, 5' ... 50 0.15 1
(BJ369186) Dictyostelium discoideum cDNA clone:ddc49k17, 5' ... 50 0.15 1
(BJ351548) Dictyostelium discoideum cDNA clone:dda43h24, 3' ... 50 0.15 1
(BJ341162) Dictyostelium discoideum cDNA clone:dda5a15, 3' e... 50 0.15 1
(BJ327029) Dictyostelium discoideum cDNA clone:dda18k22, 5' ... 50 0.15 1
(BF425834) su16e06.y1 Gm-c1066 Glycine max cDNA clone GENOME... 50 0.15 1
(GH606117) G1297P557RC11.T0 C. parvum KSU-1 normalized sporo... 50 0.15 1
(GH597808) G1297P534RG16.T0 C. parvum KSU-1 normalized sporo... 50 0.15 1
(GH134097) G994P125FB17.T0 Neurospora crassa cDNA - 1 hour N... 50 0.15 1
(GH114224) G993P145RD22.T0 Neurospora crassa cDNA - 1 hour G... 50 0.15 1
(GE975791) G1219P126RC2.T0 Neurospora crassa cDNA - 7 Days P... 50 0.15 1
(FL583091) TSL-2266 TT7LS Triticum turgidum subsp. dicoccoid... 50 0.15 1
(FG344524) SF_15-f11 Bv_T1 Beta vulgaris subsp. vulgaris cDN... 50 0.15 1
(FF319642) 280403480 Pea aphid whole body normalized full le... 50 0.15 1
(FF299206) 279326929 Pea aphid whole body normalized full le... 50 0.15 1
(FE830797) CCAG43019.b1 CCAG Petrolisthes cinctipes heart, g... 50 0.15 1
(FE829114) CCAG42009.b1 CCAG Petrolisthes cinctipes heart, g... 50 0.15 1
(FE821578) CCAG36213.g1 CCAG Petrolisthes cinctipes heart, g... 50 0.15 1
(FE821577) CCAG36213.b1 CCAG Petrolisthes cinctipes heart, g... 50 0.15 1
(FE812442) CCAG30467.g1 CCAG Petrolisthes cinctipes heart, g... 50 0.15 1
(FE808209) CCAG27865.b1 CCAG Petrolisthes cinctipes heart, g... 50 0.15 1
(FE770081) CCAG5390.g1 CCAG Petrolisthes cinctipes heart, gi... 50 0.15 1
(FE770080) CCAG5390.b7 CCAG Petrolisthes cinctipes heart, gi... 50 0.15 1
(EY333258) CAWY5567.fwd CAWY Helobdella robusta Subtracted E... 50 0.15 1
(EY327649) CAWY12764.fwd CAWY Helobdella robusta Subtracted ... 50 0.15 1
(EY322165) CAWX8302.rev CAWX Helobdella robusta Primary Earl... 50 0.15 1
(EY233057) CATW6930.fwd CATW Aspergillus niger Pelleted fung... 50 0.15 1
(EY233056) CATW6930.rev CATW Aspergillus niger Pelleted fung... 50 0.15 1
(EX519217) HOPS-CTAB-36_2007-08-17_1/HOPS-CTAB-36_P05_009_1 ... 50 0.15 1
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 50 0.15 1
(FG286381) 1108770714831 New World Screwworm Egg 9261 ESTs C... 40 0.15 2
(AC194990) Pan troglodytes BAC clone CH251-551K5 from chromo... 38 0.21 8
(AC110391) Rattus norvegicus clone CH230-30H5, *** SEQUENCIN... 42 0.23 7
(EH009636) USDA-FP_182814 Lysiphlebus testaceipes adult whol... 46 0.24 2
(CR550307) Zebrafish DNA sequence from clone DKEY-174E10 in ... 40 0.24 5
(AC173341) Mus musculus BAC clone RP24-332P6 from chromosome... 44 0.29 2
(FE333207) CAOC2216.rev CAOC_Daphnia_pulex_Log50_Library_9 D... 46 0.29 2
(AC115598) Dictyostelium discoideum chromosome 2 map 581427-... 46 0.31 3
(AC094127) Rattus norvegicus clone CH230-3D8, *** SEQUENCING... 48 0.32 7
(AC094130) Rattus norvegicus clone CH230-3D11, WORKING DRAFT... 34 0.32 2
(CU595950) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 0.33 5
(AC119641) Rattus norvegicus clone CH230-428C17, WORKING DRA... 34 0.33 2
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 38 0.33 11
(AC123019) Rattus norvegicus clone CH230-475A13, *** SEQUENC... 42 0.33 5
(CT571271) Mouse DNA sequence from clone RP23-334M10 on chro... 44 0.33 2
(Y13119) Dictyostelium discoideum mRNA for CudA protein. 42 0.36 2
(EH710102) CCIS9408.b1_P23.ab1 CCI(LMS) chicory Cichorium in... 42 0.39 2
(BV052304) S212P6152FE3.T0 CZECHII/Ei Mus musculus STS genom... 42 0.40 2
(EI043372) hhb0001aa06.g1 hhb Oryza brachyantha genomic clon... 38 0.50 2
(AC124018) Rattus norvegicus clone CH230-122G8, WORKING DRAF... 42 0.51 5
(AL390242) Human DNA sequence from clone RP11-31F15 on chrom... 48 0.53 2
(BX511126) Zebrafish DNA sequence from clone CH211-244A17 in... 36 0.53 4
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ... 44 0.55 6
(FG296422) 1108793252569 New World Screwworm Larvae 9387 EST... 38 0.57 2
(CR392008) Zebrafish DNA sequence from clone DKEY-97G11 in l... 48 0.58 1
(AL928997) Zebrafish DNA sequence from clone CH211-125O15 in... 48 0.58 1
(BV951109) pRRL2:Newb:20080411:331153 USMARC Pig Breed SNP D... 48 0.58 1
(CT010472) Mouse DNA sequence from clone RP23-37H11 on chrom... 48 0.58 1
(AC164119) Mus musculus BAC clone RP24-288I15 from chromosom... 48 0.58 1
(AC124716) Mus musculus BAC clone RP24-144K17 from chromosom... 48 0.58 1
(AC110517) Mus musculus chromosome 17, clone RP23-13F15, com... 48 0.58 1
(DL131077) Bax-responsive genes for drug target identificati... 48 0.58 1
(AX536864) Sequence 465 from Patent WO02064766. 48 0.58 1
(AR941637) Sequence 465 from patent US 7101990. 48 0.58 1
(AR549429) Sequence 4560 from patent US 6747137. 48 0.58 1
(AM502249) Leishmania infantum chromosome 31. 48 0.58 1
(AJ301670) Dictyostelium discoideum mRNA for STATc transcrip... 48 0.58 1
(AC115680) Dictyostelium discoideum chromosome 2 map 4915084... 48 0.58 1
(AC136431) Homo sapiens chromosome 16 clone RP11-148M17, com... 48 0.58 1
(AC126760) Homo sapiens chromosome 16 clone RP11-1307B12, co... 48 0.58 1
(AC092326) Homo sapiens chromosome 16 clone RP11-14N9, compl... 48 0.58 1
(AC141623) Homo sapiens chromosome 16 clone RP11-994E3, WORK... 48 0.58 1
(AC141269) Homo sapiens chromosome 16 clone RP11-1387D15, WO... 48 0.58 1
(AC141075) Homo sapiens chromosome 16 clone RP11-626L24, WOR... 48 0.58 1
(AC140896) Homo sapiens chromosome 16 clone RP11-699D3, WORK... 48 0.58 1
(AC140895) Homo sapiens chromosome 16 clone RP11-678E4, WORK... 48 0.58 1
(AC140894) Homo sapiens chromosome 16 clone RP11-606C13, WOR... 48 0.58 1
(AC140875) Homo sapiens chromosome 16 clone RP11-1261M19, WO... 48 0.58 1
(AC140522) Homo sapiens chromosome 16 clone RP11-826F21, WOR... 48 0.58 1
(AC138962) Homo sapiens chromosome 16 clone RP11-906M12, WOR... 48 0.58 1
(AC138897) Homo sapiens chromosome 16 clone RP11-482B16, WOR... 48 0.58 1
(AC136441) Homo sapiens chromosome 16 clone RP11-460L21, WOR... 48 0.58 1
(AC136434) Homo sapiens chromosome 16 clone RP11-261E14, WOR... 48 0.58 1
(AC135145) Rattus norvegicus clone CH230-154J12, *** SEQUENC... 48 0.58 1
(AC133056) Rattus norvegicus clone CH230-25D4, WORKING DRAFT... 48 0.58 1
(AC126570) Rattus norvegicus clone CH230-32N7, WORKING DRAFT... 48 0.58 1
(AC125931) Rattus norvegicus clone CH230-50C3, WORKING DRAFT... 48 0.58 1
(AC125596) Rattus norvegicus clone CH230-300B22, *** SEQUENC... 48 0.58 1
(AC125579) Rattus norvegicus clone CH230-514M24, *** SEQUENC... 48 0.58 1
(AC118803) Rattus norvegicus clone CH230-106N12, *** SEQUENC... 48 0.58 1
(AC117110) Rattus norvegicus clone CH230-234D18, WORKING DRA... 48 0.58 1
(AC117096) Rattus norvegicus clone CH230-268L9, *** SEQUENCI... 48 0.58 1
(AC116205) Rattus norvegicus clone CH230-172M17, *** SEQUENC... 48 0.58 1
(AC113258) Rattus norvegicus clone CH230-154C2, WORKING DRAF... 48 0.58 1
(AC112067) Rattus norvegicus clone CH230-323G10, WORKING DRA... 48 0.58 1
(AC109668) Rattus norvegicus clone CH230-304O3, *** SEQUENCI... 48 0.58 1
(AC107110) Rattus norvegicus clone CH230-68J4, *** SEQUENCIN... 48 0.58 1
(AC106512) Rattus norvegicus clone CH230-201G13, WORKING DRA... 48 0.58 1
(AC103294) Rattus norvegicus clone CH230-142D22, *** SEQUENC... 48 0.58 1
(FP102599) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.58 1
(CU915520) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.58 1
(AC080140) Mus musculus strain C57BL6/J chromosome 5 clone R... 48 0.58 1
(CU466359) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.58 1
(AP010090) Lotus japonicus genomic DNA, clone: LjT45D24, TM0... 48 0.58 1
(AC218472) Bos taurus clone CH240-314J1, WORKING DRAFT SEQUE... 48 0.58 1
(AC181245) Strongylocentrotus purpuratus clone R3-115L13, WO... 48 0.58 1
(AC171740) Mustela putorius furo clone CH237-228J13, WORKING... 48 0.58 1
(AZ804790) 2M0065A08R Mouse 10kb plasmid UUGC1M library Mus ... 48 0.58 1
(AZ298694) RPCI-23-98L6.TJB RPCI-23 Mus musculus genomic clo... 48 0.58 1
(AZ277645) RPCI-23-134N7.TJ RPCI-23 Mus musculus genomic clo... 48 0.58 1
(AZ069654) RPCI-23-433C13.TV RPCI-23 Mus musculus genomic cl... 48 0.58 1
(ER622397) 1093017454579 Global-Ocean-Sampling_GS-36-01-01-2... 48 0.58 1
(EK844322) 1093017717577 Global-Ocean-Sampling_GS-33-01-01-1... 48 0.58 1
(EJ316429) 1095403293585 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.58 1
(CZ883159) OC__Ba0286H03.f OC__Ba Oryza coarctata genomic cl... 48 0.58 1
(CL685195) PRI0140c_C11_2 - PRI0140c.BR (694) Mixed stage fo... 48 0.58 1
(CE761257) tigr-gss-dog-17000370039408 Dog Library Canis lup... 48 0.58 1
(BZ151608) CH230-299P16.TJ CHORI-230 Segment 2 Rattus norveg... 48 0.58 1
(BZ063008) lla15a11.b1 B.oleracea002 Brassica oleracea genom... 48 0.58 1
(AG460547) Mus musculus molossinus DNA, clone:MSMg01-348H06.... 48 0.58 1
(EG035515) UI-EH-IJ0-abv-p-18-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035497) UI-EH-IJ0-abv-l-18-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035491) UI-EH-IJ0-abv-l-02-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035472) UI-EH-IJ0-abv-f-20-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035465) UI-EH-IJ0-abv-f-06-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035458) UI-EH-IJ0-abv-d-08-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035454) UI-EH-IJ0-abv-b-24-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035449) UI-EH-IJ0-abv-b-08-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035441) UI-EH-IJ0-abv-p-17-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035438) UI-EH-IJ0-abv-p-11-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035435) UI-EH-IJ0-abv-p-05-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035423) UI-EH-IJ0-abv-n-01-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035414) UI-EH-IJ0-abv-j-23-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035376) UI-EH-IJ0-abv-d-01-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035360) UI-EH-IJ0-abv-m-24-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035358) UI-EH-IJ0-abv-m-18-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035357) UI-EH-IJ0-abv-m-16-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035340) UI-EH-IJ0-abv-k-02-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035332) UI-EH-IJ0-abv-i-12-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035329) UI-EH-IJ0-abv-i-04-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035317) UI-EH-IJ0-abv-g-04-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035296) UI-EH-IJ0-abv-a-20-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035291) UI-EH-IJ0-abv-a-10-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035288) UI-EH-IJ0-abv-a-06-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035287) UI-EH-IJ0-abv-a-04-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035281) UI-EH-IJ0-abv-o-07-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035269) UI-EH-IJ0-abv-m-07-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035233) UI-EH-IJ0-abv-e-17-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035220) UI-EH-IJ0-abv-c-19-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035203) UI-EH-IJ0-abv-a-01-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035189) UI-EH-IJ0-abu-n-10-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035185) UI-EH-IJ0-abu-n-04-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035178) UI-EH-IJ0-abu-l-04-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035175) UI-EH-IJ0-abu-j-24-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035172) UI-EH-IJ0-abu-j-18-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035148) UI-EH-IJ0-abu-d-20-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035138) UI-EH-IJ0-abu-b-16-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035136) UI-EH-IJ0-abu-b-08-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035129) UI-EH-IJ0-abu-p-15-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035113) UI-EH-IJ0-abu-n-03-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035107) UI-EH-IJ0-abu-l-19-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035102) UI-EH-IJ0-abu-l-05-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035101) UI-EH-IJ0-abu-l-01-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035092) UI-EH-IJ0-abu-j-03-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035085) UI-EH-IJ0-abu-h-13-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035070) UI-EH-IJ0-abu-f-01-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035049) UI-EH-IJ0-abu-o-14-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035043) UI-EH-IJ0-abu-o-02-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG035016) UI-EH-IJ0-abu-g-22-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034997) UI-EH-IJ0-abu-e-06-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034995) UI-EH-IJ0-abu-c-24-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034994) UI-EH-IJ0-abu-c-22-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034993) UI-EH-IJ0-abu-c-20-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034990) UI-EH-IJ0-abu-c-12-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034985) UI-EH-IJ0-abu-c-02-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034984) UI-EH-IJ0-abu-a-24-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034980) UI-EH-IJ0-abu-a-16-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034956) UI-EH-IJ0-abu-m-05-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034953) UI-EH-IJ0-abu-k-23-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034949) UI-EH-IJ0-abu-k-13-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034948) UI-EH-IJ0-abu-k-09-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034919) UI-EH-IJ0-abu-e-13-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034904) UI-EH-IJ0-abu-a-21-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034896) UI-EH-IJ0-abt-p-20-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034893) UI-EH-IJ0-abt-p-10-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034887) UI-EH-IJ0-abt-n-24-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034878) UI-EH-IJ0-abt-n-06-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034875) UI-EH-IJ0-abt-n-02-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034842) UI-EH-IJ0-abt-f-02-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034835) UI-EH-IJ0-abt-d-02-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034831) UI-EH-IJ0-abt-b-20-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034821) UI-EH-IJ0-abt-p-11-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034820) UI-EH-IJ0-abt-p-09-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034817) UI-EH-IJ0-abt-n-21-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034807) UI-EH-IJ0-abt-l-23-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034803) UI-EH-IJ0-abt-l-13-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034791) UI-EH-IJ0-abt-j-01-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034774) UI-EH-IJ0-abt-f-19-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034773) UI-EH-IJ0-abt-f-15-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034771) UI-EH-IJ0-abt-f-09-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034769) UI-EH-IJ0-abt-f-05-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034757) UI-EH-IJ0-abt-d-05-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034747) UI-EH-IJ0-abt-o-24-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034728) UI-EH-IJ0-abt-k-16-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034725) UI-EH-IJ0-abt-k-08-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034717) UI-EH-IJ0-abt-i-16-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034716) UI-EH-IJ0-abt-i-14-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034714) UI-EH-IJ0-abt-i-10-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034694) UI-EH-IJ0-abt-e-02-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034684) UI-EH-IJ0-abt-c-06-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034670) UI-EH-IJ0-abt-o-13-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034663) UI-EH-IJ0-abt-o-01-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034660) UI-EH-IJ0-abt-m-17-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034656) UI-EH-IJ0-abt-m-05-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034648) UI-EH-IJ0-abt-k-09-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034640) UI-EH-IJ0-abt-i-13-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034639) UI-EH-IJ0-abt-i-11-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034626) UI-EH-IJ0-abt-g-05-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034624) UI-EH-IJ0-abt-g-01-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034610) UI-EH-IJ0-abt-c-09-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034602) UI-EH-IJ0-abt-a-15-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034584) UI-EH-IJ0-abs-n-18-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034579) UI-EH-IJ0-abs-l-22-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034577) UI-EH-IJ0-abs-l-20-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034572) UI-EH-IJ0-abs-l-10-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1
(EG034566) UI-EH-IJ0-abs-j-22-0-UI.s1 UI-EH-IJ0 Emiliania hu... 48 0.58 1

>(AJ581661) Dictyostelium discoideum partial dstB gene for Dd-STATb
protein, genomic RNA.
Length = 3447

Score = 930 bits (469), Expect(3) = 0.0
Identities = 469/469 (100%)
Strand = Plus / Plus


Query: 366 ttcaacactttggcaaaatggtttcatttttatgtttttaaaaagagatgttgtaactca 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2979 ttcaacactttggcaaaatggtttcatttttatgtttttaaaaagagatgttgtaactca 3038


Query: 426 aatcttaaagaatcaagatgttggtacttttgttattctcttttctgaagctttccctgg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3039 aatcttaaagaatcaagatgttggtacttttgttattctcttttctgaagctttccctgg 3098


Query: 486 tcaattggaaatttcatatgttggtactgatcaaaaagattcactttcaaagagttctaa 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3099 tcaattggaaatttcatatgttggtactgatcaaaaagattcactttcaaagagttctaa 3158


Query: 546 tgatttacaatctccaaccacaaccacaacaacaacaacttcaactagagttaaacatta 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3159 tgatttacaatctccaaccacaaccacaacaacaacaacttcaactagagttaaacatta 3218


Query: 606 tttagttcaagcaaatgatacttctggttcaaaaagaactttacccgattttttaagtga 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3219 tttagttcaagcaaatgatacttctggttcaaaaagaactttacccgattttttaagtga 3278


Query: 666 atgtaatcaatttactcatattttacaattaaacatagcaatgatccctcaaactgaaac 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3279 atgtaatcaatttactcatattttacaattaaacatagcaatgatccctcaaactgaaac 3338


Query: 726 tattccagtatttaaacgagaacctaaaaatgttgtattggaaccatattacagtaaaag 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3339 tattccagtatttaaacgagaacctaaaaatgttgtattggaaccatattacagtaaaag 3398


Query: 786 acaaaattcccaaaatatacttggaagtggttatgatcctttattttaa 834
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3399 acaaaattcccaaaatatacttggaagtggttatgatcctttattttaa 3447

Score = 626 bits (316), Expect(3) = 0.0
Identities = 316/316 (100%)
Strand = Plus / Plus


Query: 1 aaacaaaacttggttcaacattggaatcagaactacaagcattgaatcaattgtatagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2111 aaacaaaacttggttcaacattggaatcagaactacaagcattgaatcaattgtatagtc 2170


Query: 61 aaactattttagaaccaaatcaactttgtaaattggatattttattacaagatgtttcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2171 aaactattttagaaccaaatcaactttgtaaattggatattttattacaagatgtttcaa 2230


Query: 121 ttcaattgaaacaacttcatctctatcaaatggaattaaactatggttatggatcgaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2231 ttcaattgaaacaacttcatctctatcaaatggaattaaactatggttatggatcgaatg 2290


Query: 181 aaccattcccagcaacgctggtaatcattaaacaaccattcccaatggtaattagtaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2291 aaccattcccagcaacgctggtaatcattaaacaaccattcccaatggtaattagtaaat 2350


Query: 241 ttaaacaattacaagaggatcatctttgtgttcaattattgacaggtgcaaatgttgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2351 ttaaacaattacaagaggatcatctttgtgttcaattattgacaggtgcaaatgttgaaa 2410


Query: 301 ttgtttcttattcacc 316
||||||||||||||||
Sbjct: 2411 ttgtttcttattcacc 2426

Score = 79.8 bits (40), Expect(3) = 0.0
Identities = 40/40 (100%)
Strand = Plus / Plus


Query: 316 ccgattagagcagagttggtatttcattcaaagaatttaa 355
||||||||||||||||||||||||||||||||||||||||
Sbjct: 2425 ccgattagagcagagttggtatttcattcaaagaatttaa 2464

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,301,942,432
Number of extensions: 115464330
Number of successful extensions: 9978982
Number of sequences better than 10.0: 4078
Length of query: 887
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 863
Effective length of database: 99,340,224,878
Effective search space: 85730614069714
Effective search space used: 85730614069714
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.14
Homology vs Protein
Query= Contig-U01295-1 (Contig-U01295-1Q) /CSM_Contig/Contig-U01295-1Q.Seq.d
(887 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q70GP4) RecName: Full=Signal transducer and activator of transc... 289 8e-77
(Q54BD4) RecName: Full=Signal transducer and activator of transc... 110 8e-23
AJ301670_1(AJ301670|pid:none) Dictyostelium discoideum mRNA for ... 110 8e-23
(O00910) RecName: Full=Signal transducer and activator of transc... 98 3e-19
AC116305_84(AC116305|pid:none) Dictyostelium discoideum chromoso... 71 4e-11
AK153405_1(AK153405|pid:none) Mus musculus bone marrow macrophag... 38 0.40
AY180375_1(AY180375|pid:none) Tetraodon fluviatilis STAT6 gene, ... 38 0.52
AF206162_1(AF206162|pid:none) Mus musculus signal transducer and... 38 0.52
AK149924_1(AK149924|pid:none) Mus musculus bone marrow macrophag... 38 0.52
AK030903_1(AK030903|pid:none) Mus musculus adult male thymus cDN... 38 0.52
CP001072_62(CP001072|pid:none) Helicobacter pylori Shi470, compl... 37 0.68
AB032429_6(AB032429|pid:none) Helicobacter pylori lspA, UreA, Ur... 37 0.68
CP000241_71(CP000241|pid:none) Helicobacter pylori HPAG1, comple... 37 0.68
AX044734_1(AX044734|pid:none) Sequence 195 from Patent WO0066722. 37 0.68
A24198_4(A24198|pid:none) H.pylori ureE, ureF, ureG, ureH, ureI ... 37 0.89
(B6JPH2) RecName: Full=Urease accessory protein ureF; &CP001217... 37 1.2
AL596027_2(AL596027|pid:none) Zebrafish DNA sequence from clone ... 36 1.5
BX649377_1(BX649377|pid:none) Zebrafish DNA sequence from clone ... 36 1.5
AL672145_1(AL672145|pid:none) Zebrafish DNA sequence from clone ... 36 1.5
AL731861_1(AL731861|pid:none) Zebrafish DNA sequence from clone ... 36 1.5
AL672166_2(AL672166|pid:none) Zebrafish DNA sequence from clone ... 36 1.5
DQ848884_1(DQ848884|pid:none) Scophthalmus maximus clone sa1168 ... 36 2.0
AB177398_1(AB177398|pid:none) Cercopithecus aethiops STAT2 mRNA ... 35 2.6
(P52630) RecName: Full=Signal transducer and activator of transc... 35 2.6
AJ005692_1(AJ005692|pid:none) Danio rerio mRNA for transcription... 35 2.6
AY458653_1(AY458653|pid:none) Takifugu rubripes STAT4 (Stat4) ge... 35 2.6
(P42226) RecName: Full=Signal transducer and activator of transc... 35 3.4
AF481809_1(AF481809|pid:none) Mus musculus signal transducer and... 35 3.4
AF067575_1(AF067575|pid:none) Homo sapiens signal transducer and... 35 3.4
AK291044_1(AK291044|pid:none) Homo sapiens cDNA FLJ77755 complet... 35 3.4
AJ720431_1(AJ720431|pid:none) Gallus gallus mRNA for hypothetica... 35 3.4
AB038383_1(AB038383|pid:none) Bos taurus STAT6 mRNA for signal t... 35 3.4
AB103089_1(AB103089|pid:none) Homo sapiens STAT6 mRNA for signal... 35 3.4
BT007380_1(BT007380|pid:none) Homo sapiens signal transducer and... 35 3.4
AF481808_1(AF481808|pid:none) Mus musculus signal transducer and... 35 3.4
AK316142_1(AK316142|pid:none) Homo sapiens cDNA, FLJ79041 comple... 35 3.4
AK312471_1(AK312471|pid:none) Homo sapiens cDNA, FLJ92827, highl... 35 3.4
AK299094_1(AK299094|pid:none) Homo sapiens cDNA FLJ51958 complet... 35 3.4
(Q9WVL2) RecName: Full=Signal transducer and activator of transc... 35 3.4
(P52633) RecName: Full=Signal transducer and transcription activ... 35 3.4
AF055292_1(AF055292|pid:none) Rattus norvegicus signal transduce... 35 3.4
(P42228) RecName: Full=Signal transducer and activator of transc... 35 4.4
AF307107_1(AF307107|pid:none) Tetraodon fluviatilis STAT4 mRNA, ... 35 4.4
AK088991_1(AK088991|pid:none) Mus musculus 2 days neonate thymus... 35 4.4
AM711867_1872(AM711867|pid:none) Clavibacter michiganensis subsp... 34 5.8
AY327491_1(AY327491|pid:none) Penaeus monodon signal transducer ... 34 7.5
AB020984_1(AB020984|pid:none) Sus scrofa mRNA for signal transdu... 34 7.5
EU367985_1(EU367985|pid:none) Penaeus monodon STAT long form mRN... 34 7.5
AB209043_1(AB209043|pid:none) Homo sapiens mRNA for signal trans... 34 7.5
(Q14765) RecName: Full=Signal transducer and activator of transc... 34 7.5
AY455975_1(AY455975|pid:none) Peromyscus maniculatus signal tran... 34 7.5
(P42224) RecName: Full=Signal transducer and activator of transc... 33 9.8
AF349678_1(AF349678|pid:none) Mus musculus signal transducer and... 33 9.8
A46159(A46159)interferon-dependent positive-acting transcription... 33 9.8
DQ092343_1(DQ092343|pid:none) Mesocricetus auratus signal transd... 33 9.8
AB275897_1(AB275897|pid:none) Gallus gallus STAT4 mRNA for STAT4... 33 9.8
CR749636_1(CR749636|pid:none) Homo sapiens mRNA; cDNA DKFZp686B0... 33 9.8
CR860763_1(CR860763|pid:none) Pongo abelii mRNA; cDNA DKFZp459D2... 33 9.8
BC062079_1(BC062079|pid:none) Rattus norvegicus signal transduce... 33 9.8
AK082706_1(AK082706|pid:none) Mus musculus 0 day neonate cerebel... 33 9.8
AY889652_1(AY889652|pid:none) Synthetic construct Homo sapiens c... 33 9.8
AF205604_1(AF205604|pid:none) Rattus norvegicus signal transduce... 33 9.8
AM849034_1365(AM849034|pid:none) Clavibacter michiganensis subsp... 33 9.8
AK018544_1(AK018544|pid:none) Mus musculus adult male colon cDNA... 33 9.8
AB177396_1(AB177396|pid:none) Mesocricetus auratus STAT1 alpha m... 33 9.8
AK039458_1(AK039458|pid:none) Mus musculus adult male spinal cor... 33 9.8
BC124009_1(BC124009|pid:none) Xenopus tropicalis signal transduc... 33 9.8
FJ657391_1(FJ657391|pid:none) Stenopterapion tenue isolate 9ten2... 33 9.8

>(Q70GP4) RecName: Full=Signal transducer and activator of
transcription B; AltName: Full=STAT5 homolog B; AltName:
Full=Dd-STATb; &AJ581661_1(AJ581661|pid:none)
Length = 1148

Score = 289 bits (740), Expect = 8e-77
Identities = 145/155 (93%), Positives = 145/155 (93%)
Frame = +1

Query: 367 STLWQNGFIFMFLKRDVVTQILKNQDVGTFVILFSEAFPGQLEISYVGTDQKDSLSKSSN 546
STLWQNGFIFMFLKRDVVTQILKNQDVGTFVILFSEAFPGQLEISYVGTDQKDSLSKSSN
Sbjct: 994 STLWQNGFIFMFLKRDVVTQILKNQDVGTFVILFSEAFPGQLEISYVGTDQKDSLSKSSN 1053

Query: 547 DLQSPXXXXXXXXXXRVKHYLVQANDTSGSKRTLPDFLSECNQFTHILQLNIAMIPQTET 726
DLQSP RVKHYLVQANDTSGSKRTLPDFLSECNQFTHILQLNIAMIPQTET
Sbjct: 1054 DLQSPTTTTTTTTSTRVKHYLVQANDTSGSKRTLPDFLSECNQFTHILQLNIAMIPQTET 1113

Query: 727 IPVFKREPKNVVLEPYYSKRQNSQNILGSGYDPLF 831
IPVFKREPKNVVLEPYYSKRQNSQNILGSGYDPLF
Sbjct: 1114 IPVFKREPKNVVLEPYYSKRQNSQNILGSGYDPLF 1148

Score = 209 bits (533), Expect(2) = 2e-56
Identities = 105/105 (100%), Positives = 105/105 (100%)
Frame = +3

Query: 3 TKLGSTLESELQALNQLYSQTILEPNQLCKLDILLQDVSIQLKQLHLYQMELNYGYGSNE 182
TKLGSTLESELQALNQLYSQTILEPNQLCKLDILLQDVSIQLKQLHLYQMELNYGYGSNE
Sbjct: 705 TKLGSTLESELQALNQLYSQTILEPNQLCKLDILLQDVSIQLKQLHLYQMELNYGYGSNE 764

Query: 183 PFPATLVIIKQPFPMVISKFKQLQEDHLCVQLLTGANVEIVSYSP 317
PFPATLVIIKQPFPMVISKFKQLQEDHLCVQLLTGANVEIVSYSP
Sbjct: 765 PFPATLVIIKQPFPMVISKFKQLQEDHLCVQLLTGANVEIVSYSP 809

Score = 33.5 bits (75), Expect(2) = 2e-56
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +1

Query: 316 PIRAELVFHSKNLXXXXSTLWQNGFIFMFLKRDVVTQIL 432
PIRAELVFHSKNL S L + +++D TQ+L
Sbjct: 809 PIRAELVFHSKNLTKGSSNLGTQNSLKKNIEKD--TQVL 845

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,420,626,356
Number of extensions: 28504910
Number of successful extensions: 76717
Number of sequences better than 10.0: 68
Number of HSP's gapped: 76700
Number of HSP's successfully gapped: 73
Length of query: 295
Length of database: 1,051,180,864
Length adjustment: 127
Effective length of query: 168
Effective length of database: 640,137,871
Effective search space: 107543162328
Effective search space used: 107543162328
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.75 gvh: 0.60 alm: 0.43 top: 0.53 tms: 0.00 mit: 0.33 mip: 0.04
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: cytoplasmic
36.0 %: nuclear
12.0 %: cytoskeletal
12.0 %: mitochondrial

>> prediction for Contig-U01295-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 1
SL (DIR, L) 1
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0