Contig-U01292-1
Contig ID Contig-U01292-1
Contig update 2001. 8.29
Contig sequence
>Contig-U01292-1 (Contig-U01292-1Q) /CSM_Contig/Contig-U01292-1Q.Seq.d
TGGAATTAAATGATAATAGAATTTCAGGTGGATTATCAGTATTATCAGAT
TTTGAAAAATTAGAATCATTAAGTTTAAGTGGAAATCAAATTAAAACTTT
AGGAGATTTAGAACCATTAGGTAACTTACAATCACTTCAATTTTTAGATT
TATTTGCTTGTCCTGTAACACTCTTACCAAATTATTCAAAAGAATTATTC
TCCATGATAAAATCATTAGTTGCATTGGATGGTTATGATATAAATGGAAA
AGAGATTGAGGATGAT----------TAATAACAGCACAACAAATATAAA
TATAGGAAGTAATACTCCAGGTAAAGGTACATTTAGACAGGGTAGTAAAG
AGAAAAAAATTAGTAAACCATATGACATTTTAAATCAAAGTTATCATTCT
GATGAGGATGAAGATTATGAACCATCAATGAGTGAAGATGGTGGCGATGA
AAGTTTAGAGGACTCTGATTCTCAAGCTGAAGAAGAAGAAGAAGAGGAGG
ATGACTATGATCAAGAAGAAGAGGATAAAATTGTTGCTCAGTATAAACAA
TTAAGAGCACAAGGTATACCTCCAAAACATAGTAATTCAAACGATGAAGA
TGATTATGAAGATGATTCTTTTAATAAAAACACAACCAAACCATATGTAC
AAAATGAAGATTCCGAAGATGAAGCATCTGATGAGGATTATAGTGATAGT
TTATCTAAAAAGAGAAAAAATGAACAAGATGACTCGCATCTTTCAAAGAA
GAGAGCTTTTTAAAAAAAAAAAAAAAAAATTAAA

Gap gap included
Contig length 774
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 4029404
End point 4030179
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 2
Link to clone list U01292
List of clone(s)

est1=SLF221F,1,267
est2=SLF221Z,268,776
Translated Amino Acid sequence
ELNDNRISGGLSVLSDFEKLESLSLSGNQIKTLGDLEPLGNLQSLQFLDLFACPVTLLPN
YSKELFSMIKSLVALDGYDINGKEIEDD---

---NNSTTNINIGSNTPGKGTFRQGSKEKKISKPYDILNQSYHSDEDEDYEPSMSEDGGD
ESLEDSDSQAEEEEEEEDDYDQEEEDKIVAQYKQLRAQGIPPKHSNSNDEDDYEDDSFNK
NTTKPYVQNEDSEDEASDEDYSDSLSKKRKNEQDDSHLSKKRAF*kkkkkik


Translated Amino Acid sequence (All Frames)
Frame A:
wn*miiefqvdyqyyqilkn*nh*v*veiklkl*ei*nh*vtynhfnf*iyllvl*hsyq
iiqknysp**nh*lhwmvmi*mekrlrm---

---**qhnkykyrk*ysr*ryi*tg**rekn**ti*hfksklsf**g*rl*tine*rwwr
*kfrgl*fss*rrrrrgg*l*srrrg*nccsv*tikstrytskt**fkr*r*l*r*ff**
khnqtictk*rfrr*si**gl***fi*kekk*tr*lasfkeesflkkkkkn*

Frame B:
gik***nfrwiisiirf*kiriikfkwksn*nfrrfrtir*ltitsifrficlscntltk
lfkriilhdkiiscigwl*ykwkrd*g*---

---NNSTTNINIGSNTPGKGTFRQGSKEKKISKPYDILNQSYHSDEDEDYEPSMSEDGGD
ESLEDSDSQAEEEEEEEDDYDQEEEDKIVAQYKQLRAQGIPPKHSNSNDEDDYEDDSFNK
NTTKPYVQNEDSEDEASDEDYSDSLSKKRKNEQDDSHLSKKRAF*kkkkkik

Frame C:
ELNDNRISGGLSVLSDFEKLESLSLSGNQIKTLGDLEPLGNLQSLQFLDLFACPVTLLPN
YSKELFSMIKSLVALDGYDINGKEIEDD---

---itaqqi*i*evilqvkvhldrvvkrkklvnhmtf*ikviilmrmkimnhq*vkmvam
kv*rtlilklkkkkkrrmtmikkkriklllsinn*ehkvylqniviqtmkmimkmillik
tqpnhmykmkipkmkhlmriivivylkrekmnkmtrifqrrelfkkkkkkl

own update 2004. 6. 7
Homology vs CSM-cDNA
Query= Contig-U01292-1 (Contig-U01292-1Q)
/CSM_Contig/Contig-U01292-1Q.Seq.d
(784 letters)

Database: CSM
8361 sequences; 7,895,291 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U01292-1 (Contig-U01292-1Q) /CSM_Contig/Conti... 846 0.0
Contig-U12461-1 (Contig-U12461-1Q) /CSM_Contig/Conti... 42 0.001
Contig-U13879-1 (Contig-U13879-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U10870-1 (Contig-U10870-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U10725-1 (Contig-U10725-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U09686-1 (Contig-U09686-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U09216-1 (Contig-U09216-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U01107-1 (Contig-U01107-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U12316-1 (Contig-U12316-1Q) /CSM_Contig/Conti... 38 0.019
Contig-U11459-1 (Contig-U11459-1Q) /CSM_Contig/Conti... 38 0.019

>Contig-U01292-1 (Contig-U01292-1Q) /CSM_Contig/Contig-U01292-1Q.Seq.d
Length = 784

Score = 846 bits (427), Expect = 0.0
Identities = 471/478 (98%)
Strand = Plus / Plus


Query: 1 tggaattaaatgataatagaatttcaggtggattatcagtattatcagattttgaaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggaattaaatgataatagaatttcaggtggattatcagtattatcagattttgaaaaat 60


Query: 61 tagaatcattaagtttaagtggaaatcaaattaaaactttaggagatttagaaccattag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagaatcattaagtttaagtggaaatcaaattaaaactttaggagatttagaaccattag 120


Query: 121 gtaacttacaatcacttcaatttttagatttatttgcttgtcctgtaacactcttaccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtaacttacaatcacttcaatttttagatttatttgcttgtcctgtaacactcttaccaa 180


Query: 181 attattcaaaagaattattctccatgataaaatcattagttgcattggatggttatgata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attattcaaaagaattattctccatgataaaatcattagttgcattggatggttatgata 240


Query: 241 taaatggaaaagagattgaggatgatnnnnnnnnnntaataacagcacaacaaatataaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taaatggaaaagagattgaggatgatnnnnnnnnnntaataacagcacaacaaatataaa 300


Query: 301 tataggaagtaatactccaggtaaaggtacatttagacagggtagtaaagagnnnnnnnt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 301 tataggaagtaatactccaggtaaaggtacatttagacagggtagtaaagagaaaaaaat 360


Query: 361 tagtaaaccatatgacattttaaatcaaagttatcattctgatgaggatgaagattatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tagtaaaccatatgacattttaaatcaaagttatcattctgatgaggatgaagattatga 420


Query: 421 accatcaatgagtgaagatggtggcgatgaaagtttagaggactctgattctcaagct 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 accatcaatgagtgaagatggtggcgatgaaagtttagaggactctgattctcaagct 478


Score = 527 bits (266), Expect = e-150
Identities = 266/266 (100%)
Strand = Plus / Plus


Query: 496 ggaggatgactatgatcaagaagaagaggataaaattgttgctcagtataaacaattaag 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ggaggatgactatgatcaagaagaagaggataaaattgttgctcagtataaacaattaag 555


Query: 556 agcacaaggtatacctccaaaacatagtaattcaaacgatgaagatgattatgaagatga 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 agcacaaggtatacctccaaaacatagtaattcaaacgatgaagatgattatgaagatga 615


Query: 616 ttcttttaataaaaacacaaccaaaccatatgtacaaaatgaagattccgaagatgaagc 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ttcttttaataaaaacacaaccaaaccatatgtacaaaatgaagattccgaagatgaagc 675


Query: 676 atctgatgaggattatagtgatagtttatctaaaaagagaaaaaatgaacaagatgactc 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 atctgatgaggattatagtgatagtttatctaaaaagagaaaaaatgaacaagatgactc 735


Query: 736 gcatctttcaaagaagagagcttttt 761
||||||||||||||||||||||||||
Sbjct: 736 gcatctttcaaagaagagagcttttt 761


>Contig-U12461-1 (Contig-U12461-1Q) /CSM_Contig/Contig-U12461-1Q.Seq.d
Length = 1360

Score = 42.1 bits (21), Expect = 0.001
Identities = 30/33 (90%)
Strand = Plus / Plus


Query: 593 gatgaagatgattatgaagatgattcttttaat 625
|||||||||||| ||||||||||| |||||||
Sbjct: 601 gatgaagatgatgatgaagatgatgattttaat 633


>Contig-U13879-1 (Contig-U13879-1Q) /CSM_Contig/Contig-U13879-1Q.Seq.d
Length = 2154

Score = 40.1 bits (20), Expect = 0.005
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 42 ttatcagattttgaaaaatt 61
||||||||||||||||||||
Sbjct: 691 ttatcagattttgaaaaatt 710


Database: CSM
Posted date: Jun 7, 2004 8:33 AM
Number of letters in database: 7,895,291
Number of sequences in database: 8361

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,408
Number of Sequences: 8361
Number of extensions: 15408
Number of successful extensions: 2085
Number of sequences better than 10.0: 239
length of query: 784
length of database: 7,895,291
effective HSP length: 16
effective length of query: 768
effective length of database: 7,761,515
effective search space: 5960843520
effective search space used: 5960843520
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 4.26
Homology vs DNA
Query= Contig-U01292-1 (Contig-U01292-1Q) /CSM_Contig/Contig-U01292-1Q.Seq.d
(784 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AU052860) Dictyostelium discoideum slug cDNA, clone SLF221. 527 0.0 3
(AU261657) Dictyostelium discoideum vegetative cDNA clone:VS... 527 e-150 2
(AU061650) Dictyostelium discoideum slug cDNA, clone SLF221. 527 e-145 1
(FC748847) CBBI4173.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 44 0.006 2
(FC749898) CBBI4799.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 44 0.006 2
(FC743598) CBBI13801.fwd CBBI Lottia gigantea 26h,37h,61h La... 44 0.006 2
(FC718698) CBBG12305.fwd CBBG Lottia gigantea 12,15,18h embr... 44 0.006 2
(FC754228) CBBI7859.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 44 0.006 2
(FC681167) CAXX14934.fwd CAXX Lottia gigantea from male gona... 44 0.006 2
(FC559227) CAWF2182.fwd CAWF Lottia gigantea from mantle (H)... 44 0.006 2
(FC750385) CBBI5100.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 44 0.006 2
(FC757203) CBBI9896.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 44 0.006 2
(FC769846) CBBN530.fwd CBBN Lottia gigantea 3,4,5,6.5d Larva... 44 0.006 2
(FC719847) CBBG1303.fwd CBBG Lottia gigantea 12,15,18h embry... 44 0.006 2
(FC725486) CBBG2856.fwd CBBG Lottia gigantea 12,15,18h embry... 44 0.006 2
(FC750470) CBBI5158.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 44 0.006 2
(FC717809) CBBG11737.fwd CBBG Lottia gigantea 12,15,18h embr... 44 0.006 2
(FC709971) CAXY609.fwd CAXY Lottia gigantea from male gonad ... 44 0.007 2
(FC723564) CBBG1551.fwd CBBG Lottia gigantea 12,15,18h embry... 44 0.007 2
(FC735719) CBBG9859.fwd CBBG Lottia gigantea 12,15,18h embry... 44 0.007 2
(FC757601) CBBN10175.fwd CBBN Lottia gigantea 3,4,5,6.5d Lar... 44 0.007 2
(FC755428) CBBI8711.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 44 0.007 2
(FC751482) CBBI5781.fwd CBBI Lottia gigantea 26h,37h,61h Lar... 44 0.007 2
(FC620038) CAXT10314.fwd CAXT Lottia gigantea from mantle Lo... 44 0.007 2
(FC619290) CAXS9918.fwd CAXS Lottia gigantea from head, foot... 44 0.007 2
(FC715590) CBBG10228.fwd CBBG Lottia gigantea 12,15,18h embr... 44 0.007 2
(FC713647) CAXY8453.fwd CAXY Lottia gigantea from male gonad... 44 0.007 2
(FC745303) CBBI14836.fwd CBBI Lottia gigantea 26h,37h,61h La... 44 0.007 2
(FC744957) CBBI14620.fwd CBBI Lottia gigantea 26h,37h,61h La... 44 0.007 2
(FC609621) CAXS4540.fwd CAXS Lottia gigantea from head, foot... 44 0.007 2
(FC641806) CAXU5611.fwd CAXU Lottia gigantea from female gon... 44 0.007 2
(EK031941) 1092956071176 Global-Ocean-Sampling_GS-31-01-01-1... 52 0.033 1
(AE014822) Plasmodium falciparum 3D7 chromosome 14 section 7... 40 0.040 8
(EY903977) RR2E513JQ RR2(MS) Raphanus raphanistrum subsp. ra... 36 0.042 3
(AE014850) Plasmodium falciparum 3D7 chromosome 12, section ... 36 0.045 9
(DX911568) KBrH048M09R KBrH, Brassica rapa HindIII BAC libra... 34 0.057 4
(AL929352) Plasmodium falciparum strain 3D7, chromosome 5, s... 36 0.066 11
(BC034896) Mus musculus RNA binding motif protein 17, mRNA (... 50 0.13 1
(AL831794) Mouse DNA sequence from clone RP23-114B13 on chro... 50 0.13 1
(AF083384) Mus musculus 45kDa splicing factor mRNA, complete... 50 0.13 1
(AR474065) Sequence 6 from patent US 6689865. 50 0.13 1
(AR303275) Sequence 6 from patent US 6544735. 50 0.13 1
(AR108780) Sequence 6 from patent US 6111092. 50 0.13 1
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 50 0.13 1
(AK012296) Mus musculus 11 days embryo whole body cDNA, RIKE... 50 0.13 1
(CG566337) OST191903 Mus musculus 129Sv/Ev Mus musculus cDNA... 50 0.13 1
(CG555315) OST169822 Mus musculus 129Sv/Ev Mus musculus cDNA... 50 0.13 1
(EL772273) Plate_10b_H07 Hibernating 13-lined squirrel brain... 50 0.13 1
(EE768113) 020322OFLT027022HT OFLT Ovis aries cDNA, mRNA seq... 50 0.13 1
(AV579994) Mus musculus cDNA, Abe mouse ES cell cDNA library... 50 0.13 1
(AV571001) Mus musculus cDNA, Abe mouse ES cell cDNA library... 50 0.13 1
(DV043473) DAY10_15_L11.x1 FH DAY10 Mus musculus cDNA clone ... 50 0.13 1
(DT930881) BMSB12893 Hematopoietic stem cells Mus musculus c... 50 0.13 1
(DT908008) BMSB13686 Hematopoietic stem cells Mus musculus c... 50 0.13 1
(DT903651) mgrlh0292 Hematopoietic stem cells Mus musculus c... 50 0.13 1
(DN173340) NMB07402 Mus Musculus Lateral Ventricle Wall C57B... 50 0.13 1
(CX230454) MBM05484 Mus Musculus hematopoietic BM-HPC5 cDNA ... 50 0.13 1
(CX226204) MBM01415 Mus Musculus hematopoietic BM-HPC5 cDNA ... 50 0.13 1
(CX121303) MPA02094 Embryonic day 10 Mouse Pancreas Amplifie... 50 0.13 1
(CV560305) UI-M-HA0-ctn-c-02-0-UI.r1 NIH_BMAP_HA0 Mus muscul... 50 0.13 1
(CO428085) UI-M-HW0-crt-e-04-0-UI.r1 NIH_BMAP_HW0 Mus muscul... 50 0.13 1
(CF951243) UI-M-HL0-cna-p-22-0-UI.r1 NIH_BMAP_HL0 Mus muscul... 50 0.13 1
(CF582930) AGENCOURT_11363096_updated NIH_MGC_137 Mus muscul... 50 0.13 1
(CB195599) AGENCOURT_11259625 NIH_MGC_135 Mus musculus cDNA ... 50 0.13 1
(CA978147) AGENCOURT_11296291 NIH_MGC_164 Mus musculus cDNA ... 50 0.13 1
(BY711453) Mus musculus 11 days embryo whole body cDNA, RIKE... 50 0.13 1
(BU614469) UI-M-EV0-cbg-b-08-0-UI.r1 NIH_BMAP_EV0 Mus muscul... 50 0.13 1
(BU563215) AGENCOURT_10277914 NIH_MGC_144 Mus musculus cDNA ... 50 0.13 1
(BU520462) AGENCOURT_10153309 NIH_MGC_134 Mus musculus cDNA ... 50 0.13 1
(BU510225) AGENCOURT_10128499 NIH_MGC_134 Mus musculus cDNA ... 50 0.13 1
(BQ933938) AGENCOURT_8752694 NIH_MGC_130 Mus musculus cDNA c... 50 0.13 1
(BQ933635) AGENCOURT_8863888 NIH_MGC_129 Mus musculus cDNA c... 50 0.13 1
(BQ920446) AGENCOURT_10017540 NCI_CGAP_Mam2 Mus musculus cDN... 50 0.13 1
(BQ445328) UI-M-ER0-bxn-h-07-0-UI.r1 NIH_BMAP_ER0 Mus muscul... 50 0.13 1
(BM934823) UI-M-BH3-aqn-d-11-0-UI.r1 NIH_BMAP_M_S4 Mus muscu... 50 0.13 1
(BM932478) UI-M-BH2.1-ape-c-03-0-UI.r1 NIH_BMAP_M_S3.1 Mus m... 50 0.13 1
(BG921621) 602825496F1 NCI_CGAP_Mam6 Mus musculus cDNA clone... 50 0.13 1
(AA870330) vq14f01.r1 Barstead stromal cell line MPLRB8 Mus ... 50 0.13 1
(AA870221) vq13c08.r1 Barstead stromal cell line MPLRB8 Mus ... 50 0.13 1
(AA869596) vq20a03.r1 Barstead stromal cell line MPLRB8 Mus ... 50 0.13 1
(AA691463) vu15e12.r1 Barstead mouse myotubes MPLRB5 Mus mus... 50 0.13 1
(AA546967) vk68c10.s1 Knowles Solter mouse 2 cell Mus muscul... 50 0.13 1
(AA545333) vj94f11.s1 Knowles Solter mouse 2 cell Mus muscul... 50 0.13 1
(AW456148) UI-M-BH3-aqn-d-11-0-UI.s1 NIH_BMAP_M_S4 Mus muscu... 50 0.13 1
(AA438043) ve48b11.r1 Beddington mouse embryonic region Mus ... 50 0.13 1
(AE016795) Vibrio vulnificus CMCP6 chromosome I complete seq... 50 0.13 1
(EU587393) Ostrea conchaphila clone C4 microsatellite sequence. 36 0.25 2
(CN740352) SM_TP0799 Suidasia medanensis cDNA library Suidas... 38 0.28 3
(DV153560) CV03092A2F08.f1 CV03-normalized library Euphorbia... 42 0.31 2
(DV153221) CV03091A2E12.f1 CV03-normalized library Euphorbia... 42 0.33 2
(CF749815) UI-M-HJ0-cmn-l-07-0-UI.r1 NIH_BMAP_HJ0 Mus muscul... 40 0.34 2
(ED250386) AUAC-aap03b02.b1 Ascaris suum whole genome shotgu... 34 0.37 2
(ED170644) AUAC-aat47f11.b1 Ascaris suum whole genome shotgu... 34 0.37 2
(AL929358) Plasmodium falciparum strain 3D7, chromosome 9; s... 32 0.40 9
(AM661762) Entamoeba moshkovskii FIC GSS, clone mosh114e09.q1k. 30 0.43 4
(AM652064) Entamoeba moshkovskii FIC GSS, clone mosh110g05.q1k. 30 0.43 4
(AM662776) Entamoeba moshkovskii FIC GSS, clone mosh127g02.p1k. 30 0.44 4
(CT030641) Mouse DNA sequence from clone RP23-32M15 on chrom... 48 0.51 1
(BC068018) Mus musculus zinc finger protein 654, mRNA (cDNA ... 48 0.51 1
(BC027760) Mus musculus zinc finger protein 654, mRNA (cDNA ... 48 0.51 1
(FB571382) Sequence 249 from Patent EP1865317. 48 0.51 1
(FB571360) Sequence 227 from Patent EP1865317. 48 0.51 1
(FB571359) Sequence 226 from Patent EP1865317. 48 0.51 1
(FB571326) Sequence 193 from Patent EP1865317. 48 0.51 1
(FB571304) Sequence 171 from Patent EP1865317. 48 0.51 1
(EA102745) Sequence 128 from patent US 7195870. 48 0.51 1
(EA102703) Sequence 86 from patent US 7195870. 48 0.51 1
(DJ386595) Diagnosis of Diseases Associated with Metastasis. 48 0.51 1
(DJ386565) Diagnosis of Diseases Associated with Metastasis. 48 0.51 1
(DD209227) test. 48 0.51 1
(DD209099) test. 48 0.51 1
(DD010736) Diagnosis of known genetic Parameters within the ... 48 0.51 1
(DD010735) Diagnosis of known genetic Parameters within the ... 48 0.51 1
(CS623693) Sequence 244 from Patent WO2006071466. 48 0.51 1
(CS374525) Sequence 628 from Patent WO2006034879. 48 0.51 1
(CS374253) Sequence 356 from Patent WO2006034879. 48 0.51 1
(CQ787270) Sequence 120 from Patent WO2004020662. 48 0.51 1
(CQ787258) Sequence 108 from Patent WO2004020662. 48 0.51 1
(BD460529) Diagnosis of Diseases Associated with Cell Cycle. 48 0.51 1
(BD452667) Diagnosis of Diseases Associated with tumor suppr... 48 0.51 1
(BD452572) Diagnosis of Diseases Associated with tumor suppr... 48 0.51 1
(BD452451) Diagnosis of Diseases Associated with Cell Cycle. 48 0.51 1
(AX826064) Sequence 316 from Patent WO03072821. 48 0.51 1
(AX825936) Sequence 188 from Patent WO03072821. 48 0.51 1
(AX822424) Sequence 316 from Patent EP1340818. 48 0.51 1
(AX822296) Sequence 188 from Patent EP1340818. 48 0.51 1
(AX356395) Sequence 29 from Patent WO0181622. 48 0.51 1
(AX348960) Sequence 418 from Patent WO0202807. 48 0.51 1
(AX348934) Sequence 392 from Patent WO0202807. 48 0.51 1
(AX348579) Sequence 37 from Patent WO0202807. 48 0.51 1
(AX347077) Sequence 2148 from Patent WO0200928. 48 0.51 1
(AX347063) Sequence 2134 from Patent WO0200928. 48 0.51 1
(AX346801) Sequence 1872 from Patent WO0200928. 48 0.51 1
(AX345757) Sequence 828 from Patent WO0200928. 48 0.51 1
(AX345514) Sequence 585 from Patent WO0200928. 48 0.51 1
(AX345379) Sequence 450 from Patent WO0200928. 48 0.51 1
(AX345254) Sequence 325 from Patent WO0200928. 48 0.51 1
(AX345239) Sequence 310 from Patent WO0200928. 48 0.51 1
(AX345159) Sequence 230 from Patent WO0200928. 48 0.51 1
(AX344989) Sequence 60 from Patent WO0200928. 48 0.51 1
(AX344572) Sequence 23 from Patent WO0200932. 48 0.51 1
(AX344559) Sequence 10 from Patent WO0200932. 48 0.51 1
(AX344555) Sequence 6 from Patent WO0200932. 48 0.51 1
(AX344553) Sequence 4 from Patent WO0200932. 48 0.51 1
(AX344209) Sequence 56 from Patent WO0200926. 48 0.51 1
(AX344182) Sequence 29 from Patent WO0200926. 48 0.51 1
(AX323604) Sequence 92 from Patent WO0192565. 48 0.51 1
(AX281391) Sequence 55 from Patent WO0177376. 48 0.51 1
(AX281361) Sequence 25 from Patent WO0177376. 48 0.51 1
(AX281158) Sequence 23 from Patent WO0177377. 48 0.51 1
(AX277965) Sequence 128 from Patent WO0177375. 48 0.51 1
(AX277923) Sequence 86 from Patent WO0177375. 48 0.51 1
(AX252065) Sequence 326 from Patent WO0168911. 48 0.51 1
(AX251146) Sequence 114 from Patent WO0168912. 48 0.51 1
(AX251051) Sequence 19 from Patent WO0168912. 48 0.51 1
(GM995952) Sequence 92 from Patent EP2014776. 48 0.51 1
(AR453046) Sequence 23 from patent US 6677731. 48 0.51 1
(AL844506) Plasmodium falciparum chromosome 7. 48 0.51 1
(AK005508) Mus musculus adult female placenta cDNA, RIKEN fu... 48 0.51 1
(AZ523539) 220PbG03 Pb MBN #21 Plasmodium berghei genomic 3'... 48 0.51 1
(EL505590) H01_1478_302.AB1 Blood stage Plasmodium falciparu... 48 0.51 1
(CN719211) E0780C09-5 NIA Mouse four-cell-Embryo cDNA librar... 48 0.51 1
(CF732849) UI-M-HB0-cka-e-03-0-UI.r1 NIH_BMAP_HB0 Mus muscul... 48 0.51 1
(BY705711) Mus musculus adult female placenta cDNA, RIKEN fu... 48 0.51 1
(BQ899470) AGENCOURT_8750843 NIH_MGC_130 Mus musculus cDNA c... 48 0.51 1
(BQ451133) PfESToab04b09.y1 Plasmodium falciparum 3D7 asexua... 48 0.51 1
(BQ407846) GA__Ed0003B07r Gossypium arboreum 7-10 dpa fiber ... 48 0.51 1
(BM276197) PfESToaa71f02.y1 Plasmodium falciparum 3D7 gameto... 48 0.51 1
(BM273858) PfESToaa60e04.y1 Plasmodium falciparum 3D7 gameto... 48 0.51 1
(BI690053) 603310520F1 NCI_CGAP_Mam6 Mus musculus cDNA clone... 48 0.51 1
(FK228313) XABT229378.b1 Gateway compatible cien cDNA librar... 48 0.51 1
(FF727629) XABT42899.fwd Gateway compatible cien cDNA librar... 48 0.51 1
(FF708036) XABT29032.fwd Gateway compatible cien cDNA librar... 48 0.51 1
(FE022563) C0009255H04.P1KAM13F KN511 Ovis aries gastric lym... 48 0.51 1
(FD973587) RR2H337TF RR2(MS) Raphanus raphanistrum subsp. ra... 48 0.51 1
(FD963479) RR1GF65TF RR1(CS) Raphanus raphanistrum subsp. ma... 48 0.51 1
(FD959781) RR1GF65JQ RR1(CS) Raphanus raphanistrum subsp. ma... 48 0.51 1
(EV573944) RR4B785JQ RR4(PB) Raphanus raphanistrum subsp. la... 48 0.51 1
(EV573858) RR4B666JQ RR4(PB) Raphanus raphanistrum subsp. la... 48 0.51 1
(EV569387) RR4B785TF RR4(PB) Raphanus raphanistrum subsp. la... 48 0.51 1
(CP000576) Prochlorococcus marinus str. MIT 9301, complete g... 48 0.51 1
(CP000551) Prochlorococcus marinus str. AS9601, complete gen... 48 0.51 1
(AC005506) Plasmodium falciparum chromosome 12 clone PFYAC35... 36 0.53 11
(DY885247) CeleSEQ466 Cunninghamella elegans pBluescript (Ec... 34 0.63 3
(EF158098) Plasmodium falciparum erythrocyte membrane protei... 36 0.65 3
(AL049181) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 40 0.74 8
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s... 34 0.93 11
(DL429535) METHODS FOR ANALYZING GENES OF INDUSTRIAL YEASTS. 36 0.98 2
(DJ295984) Method for identification of useful proteins deri... 36 0.98 2
(DA660975) Homo sapiens cDNA clone MESAN2018083, 5' end, mRN... 40 0.99 2
(BW999612) Bombyx mori mRNA, clone:SES4407, expressed in fer... 40 1.0 2
(FD554083) RR4F474JQ RR4(PB) Raphanus raphanistrum subsp. la... 36 1.0 2
(FD003490) CBNH2678.g1 CBNH: Normalized blue catfish cDNA li... 40 1.0 2
(EV571494) RR4AA27JQ RR4(PB) Raphanus raphanistrum subsp. la... 36 1.1 2
(FD235813) CBZF25106.g1 CBZF: Normalized blue catfish cDNA l... 40 1.1 2
(AM434220) Vitis vinifera, whole genome shotgun sequence, co... 34 1.1 2
(FD243778) CBZF30939.g1 CBZF: Normalized blue catfish cDNA l... 40 1.2 2
(FD223760) CBZF1799.g1 CBZF: Normalized blue catfish cDNA li... 40 1.2 2
(AC173040) Bos taurus clone CH240-98E16, WORKING DRAFT SEQUE... 40 1.2 3
(AC005139) Plasmodium falciparum chromosome 12, *** SEQUENCI... 36 1.2 9
(DA572591) Homo sapiens cDNA clone HEMBB1001490, 5' end, mRN... 40 1.2 2
(CN335124) 17000532240778 GRN_EB Homo sapiens cDNA 5', mRNA ... 40 1.2 2
(AU269535) Dictyostelium discoideum vegetative cDNA clone:VS... 38 1.2 3
(EY899803) RR1DY95TF RR1(CS) Raphanus raphanistrum subsp. ma... 36 1.2 2
(FD223431) CBZF17781.g1 CBZF: Normalized blue catfish cDNA l... 40 1.2 2
(CN335133) 17000599944454 GRN_PRENEU Homo sapiens cDNA 5', m... 40 1.3 2
(DA000125) Homo sapiens cDNA clone 3NB691000147, 5' end, mRN... 40 1.4 2
(EX768462) RR3CH04JQ RR3(NY) Raphanus raphanistrum subsp. ra... 36 1.4 2
(AL354856) Human DNA sequence from clone RP11-290P3 on chrom... 34 1.4 7
(DX066489) KBrB074J14F KBrB, Brassica rapa BamHI BAC library... 34 1.6 3
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8... 36 1.9 7
(AM463130) Vitis vinifera contig VV78X028833.4, whole genome... 46 2.0 1
(AX345035) Sequence 106 from Patent WO0200928. 46 2.0 1
(FP090260) Brassica rapa subsp. pekinensis clone KBrB030P02,... 46 2.0 1
(AC179047) Strongylocentrotus purpuratus clone R3-4005E12, W... 46 2.0 1
(AC009810) Homo sapiens chromosome 3 clone RP11-571M22 map 3... 46 2.0 1
(AL409795) T3 end of clone XAV0AA002A07 of library XAV0AA fr... 46 2.0 1
(CL982863) GC0085 TIGEM gene trap library Mus musculus cDNA ... 46 2.0 1
(EL915663) INIT2_93_F11.g2_A006 G5 trophont cDNA (INIT2) Ich... 46 2.0 1
(EL911127) INIT2_44_B10.b1_A006 G5 trophont cDNA (INIT2) Ich... 46 2.0 1
(CK605730) gmrhRww6-03_D12_T7 Soybean root hair subtracted c... 46 2.0 1
(BM396036) 5009-0-15-H07.t.1 Chilcoat/Turkewitz cDNA (large ... 46 2.0 1
(FK345541) 454GmaGlobSeed80173 Soybean Seeds Containing Glob... 46 2.0 1
(FG985630) CF_WO0_83C04_SP6 Copepod Whole Organism, Normaliz... 46 2.0 1
(AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s... 32 2.3 10
(BU905773) AGENCOURT_10456541 NICHD_XGC_Emb1 Xenopus laevis ... 32 2.4 3
(AC148909) Otolemur garnettii clone CH256-559P4, WORKING DRA... 44 2.7 3
(AY916130) Epidermophyton floccosum mitochondrion, complete ... 40 2.7 2
(AC097988) Rattus norvegicus clone CH230-142N2, *** SEQUENCI... 38 2.8 5
(AL844509) Plasmodium falciparum chromosome 13. 34 3.0 14
(CU929126) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 40 3.2 2
(CJ992852) Saccharomyces pastorianus mRNA, clone: A019-59, 5... 34 3.5 2
(I70401) Sequence 3 from patent US 5679566. 36 3.5 2
(AR097283) Sequence 3 from patent US 6071700. 36 3.5 2
(DA821131) Homo sapiens cDNA clone PERIC2001021, 5' end, mRN... 40 3.6 2
(AC207400) Zea mays chromosome 5 clone CH201-270D11; ZMMBBc0... 42 3.7 2
(DL211093) Full length cDNA. 40 3.7 2
(CQ850470) Sequence 939 from Patent EP1447413. 40 3.7 2
(AK127608) Homo sapiens cDNA FLJ45706 fis, clone FEBRA202845... 40 3.7 2
(EY552647) CAWT19612.rev CAWT Capitella sp. I ECS-2004 Prima... 42 3.7 2
(EY552648) CAWT19612.fwd CAWT Capitella sp. I ECS-2004 Prima... 42 3.8 2
(AC179488) Strongylocentrotus purpuratus clone R3-1035L11, W... 34 4.0 2
(FP102863) Medicago truncatula chromosome 5 clone mth2-192k6... 34 4.0 2
(CT818472) Paramecium tetraurelia 5-PRIME EST from clone LK0... 34 4.0 3
(BC151377) Bos taurus RNA binding motif protein 17, mRNA (cD... 42 4.0 2
(EY554874) CAWT2810.rev CAWT Capitella sp. I ECS-2004 Primar... 42 4.1 2
(EY560610) CAWT6054.rev CAWT Capitella sp. I ECS-2004 Primar... 42 4.2 2
(EY512555) CAPF10844.fwd CAPF Capitella sp. I ECS-2004 whole... 42 4.2 2
(EY554875) CAWT2810.fwd CAWT Capitella sp. I ECS-2004 Primar... 42 4.2 2
(EY586097) CAWU1953.rev CAWU Capitella sp. I ECS-2004 Primar... 42 4.2 2
(EY573570) CAWU13074.fwd CAWU Capitella sp. I ECS-2004 Prima... 42 4.2 2
(EY572887) CAWU1274.rev CAWU Capitella sp. I ECS-2004 Primar... 42 4.2 2
(EY552065) CAWT19331.rev CAWT Capitella sp. I ECS-2004 Prima... 42 4.2 2
(EY542368) CAWT13570.rev CAWT Capitella sp. I ECS-2004 Prima... 42 4.3 2
(EY537815) CAWT10650.rev CAWT Capitella sp. I ECS-2004 Prima... 42 4.3 2
(EY512554) CAPF10844.rev CAPF Capitella sp. I ECS-2004 whole... 42 4.3 2
(EY298241) CAWX13802.fwd CAWX Helobdella robusta Primary Ear... 40 4.3 2
(EY542369) CAWT13570.fwd CAWT Capitella sp. I ECS-2004 Prima... 42 4.3 2
(EY586098) CAWU1953.fwd CAWU Capitella sp. I ECS-2004 Primar... 42 4.4 2
(EY552066) CAWT19331.fwd CAWT Capitella sp. I ECS-2004 Prima... 42 4.4 2
(EY572888) CAWU1274.fwd CAWU Capitella sp. I ECS-2004 Primar... 42 4.4 2
(EY560611) CAWT6054.fwd CAWT Capitella sp. I ECS-2004 Primar... 42 4.5 2
(AC177334) Strongylocentrotus purpuratus clone R3-1032L23, W... 34 4.5 6
(EY537816) CAWT10650.fwd CAWT Capitella sp. I ECS-2004 Prima... 42 4.5 2
(BD031509) Sequence tag and encoded human protein. 40 4.5 2
(AX895976) Sequence 11839 from Patent EP1033401. 40 4.5 2
(AR957370) Sequence 11839 from patent US 7115416. 40 4.5 2
(AR731770) Sequence 11839 from patent US 6783961. 40 4.5 2
(ET013269) MUGQ_CH252P316M19T7_CP589_068 CHORI-252 Vervet Mo... 38 4.8 2
(ET015054) MUGQ_CH252P319A19Sp6_CP595_080 CHORI-252 Vervet M... 38 4.9 2
(EY344520) CAWZ13216.fwd CAWZ Helobdella robusta Primary Lat... 40 4.9 2
(DQ332585) Synthetic construct Saccharomyces cerevisiae clon... 36 5.1 2
(EJ541327) 1092955375883 Global-Ocean-Sampling_GS-29-01-01-1... 34 5.1 2
(EY339539) CAWY974.fwd CAWY Helobdella robusta Subtracted Ea... 40 5.1 2
(EJ598059) 1092961109411 Global-Ocean-Sampling_GS-29-01-01-1... 34 5.1 2
(ER501458) 1093015399816 Global-Ocean-Sampling_GS-35-01-01-1... 34 5.2 2
(EJ295431) 1095388033390 Global-Ocean-Sampling_GS-27-01-01-1... 34 5.2 2
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 36 5.2 7
(BJ436332) Dictyostelium discoideum cDNA clone:ddv30g22, 3' ... 32 5.4 3
(EJ346963) 1092963553961 Global-Ocean-Sampling_GS-28-01-01-1... 42 5.5 2
(BG314764) OP1.0.72 Human THP1 cell line library Homo sapien... 40 5.8 2
(EJ794628) 1093017394865 Global-Ocean-Sampling_GS-30-02-01-1... 36 6.0 3
(U14974) Saccharomyces cerevisiae Nmd2p (NMD2) gene, complet... 36 6.0 2
(I70400) Sequence 1 from patent US 5679566. 36 6.0 2
(AR097282) Sequence 1 from patent US 6071700. 36 6.0 2
(BB972647) Plasmodium berghei str. ANKA cDNA clone: OK002374... 36 6.1 2
(EL203311) EB3RODY02FFEAD 8-day Arabidopsis seedlings, aeria... 38 6.1 2
(AC182295) Bos taurus clone CH240-487O22, WORKING DRAFT SEQU... 38 6.3 7
(DY949465) CHPY5140.b1_H13.ab1 CHP(XYZ) plains sunflower Hel... 32 6.4 3
(EY100603) CAZI24845.rev CAZI Artemisia annua normalized lea... 36 6.6 3
(CL996466) ZMMBHf0009d18.f ZMMBHf Zea mays genomic clone ZMM... 40 6.7 2
(U28158) Saccharomyces cerevisiae Ifs1p (IFS1) gene, complet... 36 7.0 2
(U12137) Saccharomyces cerevisiae Upf2p (UPF2) gene, complet... 36 7.2 2
(ER448596) 1092963840091 Global-Ocean-Sampling_GS-35-01-01-1... 34 7.5 3
(DB844595) Nilaparvata lugens mRNA, EST clone:NLEA8081, 5' e... 32 7.5 3
(AC138608) Oryza sativa Japonica Group chromosome 11 clone p... 40 7.7 4
(AC230855) Bos taurus clone CH240-497M12, WORKING DRAFT SEQU... 38 7.9 5
(BX901962) Zebrafish DNA sequence from clone DKEY-153K10 in ... 44 8.0 1
(BX470236) Zebrafish DNA sequence from clone DKEY-99O1 in li... 44 8.0 1
(BC168492) Xenopus tropicalis cDNA clone MGC:173006 IMAGE:76... 44 8.0 1
(BC115304) Danio rerio DNA cross-link repair 1C, PSO2 homolo... 44 8.0 1
(AF063866) Melanoplus sanguinipes entomopoxvirus, complete g... 44 8.0 1
(AC114553) Mus musculus chromosome 5, clone RP23-408M16, com... 44 8.0 1
(AC098720) Mus musculus BAC clone RP23-2N16 from 5, complete... 44 8.0 1
(FM992688) Candida dubliniensis CD36 chromosome 1, complete ... 44 8.0 1
(AM946611) Nicotiana sylvestris mRNA for chromomethylase (cm... 44 8.0 1
(AM946610) Nicotiana sylvestris mRNA for chromomethylase (cm... 44 8.0 1
(AM946609) Nicotiana sylvestris mRNA for chromomethylase (cm... 44 8.0 1
(AM946608) Nicotiana sylvestris mRNA for chromomethylase (cm... 44 8.0 1
(AM946607) Nicotiana sylvestris partial mRNA for chromomethy... 44 8.0 1
(AM270193) Aspergillus niger contig An09c0040, complete genome. 44 8.0 1
(AC232540) Brassica rapa subsp. pekinensis clone KBrH004A02,... 44 8.0 1
(AC009606) Arabidopsis thaliana chromosome III BAC F22F7 gen... 44 8.0 1
(AX346179) Sequence 1250 from Patent WO0200928. 44 8.0 1
(AX345860) Sequence 931 from Patent WO0200928. 44 8.0 1
(AX344571) Sequence 22 from Patent WO0200932. 44 8.0 1
(GM674891) Sequence 14 from Patent WO2008081039. 44 8.0 1
(GC702135) Sequence 17380 from patent US 6812339. 44 8.0 1
(AR520483) Sequence 25443 from patent US 6703491. 44 8.0 1
(AR505140) Sequence 10100 from patent US 6703491. 44 8.0 1
(AE014296) Drosophila melanogaster chromosome 3L, complete s... 44 8.0 1
(AC093500) Drosophila melanogaster 3L BAC RP98-29P5 (Roswell... 44 8.0 1
(AC010661) Drosophila melanogaster 3L BAC RP98-13A12 (Roswel... 44 8.0 1
(AC092953) Homo sapiens 3 BAC RP11-531F16 (Roswell Park Canc... 44 8.0 1
(AC162832) Bos taurus clone CH240-124J12, WORKING DRAFT SEQU... 44 8.0 1
(FP085595) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.0 1
(CU915607) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.0 1
(CU695254) Brassica rapa subsp. pekinensis clone KBrB007J16,... 44 8.0 1
(CU468830) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 8.0 1
(CT485786) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 8.0 1
(CR956435) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 8.0 1
(BX293561) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 8.0 1
(AC220327) Bos taurus clone CH240-361G5, WORKING DRAFT SEQUE... 44 8.0 1
(AC196336) Otolemur garnettii clone CH256-279N9, WORKING DRA... 44 8.0 1
(AC195676) Zea mays chromosome 3 clone CH201-483D5; ZMMBBc04... 44 8.0 1
(AC170976) Bos taurus clone CH240-227B2, WORKING DRAFT SEQUE... 44 8.0 1
(AC014814) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 44 8.0 1
(FI069510) CHO_OF7312xe16f1.ab1 CHO_OF7 Nicotiana tabacum ge... 44 8.0 1
(FH501129) CHO_OF4619xh05r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 8.0 1
(FH331108) CHO_OF4579xk06f1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 8.0 1
(FH067861) CHO_OF3646xg07f1.ab1 CHO_OF3 Nicotiana tabacum ge... 44 8.0 1
(ER520073) 1093015558666 Global-Ocean-Sampling_GS-35-01-01-1... 44 8.0 1
(ER370397) 1093023047097 Global-Ocean-Sampling_GS-34-01-01-1... 44 8.0 1
(EK080311) 1092961100400 Global-Ocean-Sampling_GS-31-01-01-1... 44 8.0 1
(EJ772471) 1092973701509 Global-Ocean-Sampling_GS-30-02-01-1... 44 8.0 1
(AQ254332) CpG0771A CpIOWAgDNA1 Cryptosporidium parvum genom... 44 8.0 1
(AQ023486) CpGR0018A Cryptosporidium parvum genomic random l... 44 8.0 1
(AQ023484) CpGR0016A Cryptosporidium parvum genomic random l... 44 8.0 1
(EJ741395) 1092962021376 Global-Ocean-Sampling_GS-30-02-01-1... 44 8.0 1
(CT226488) Sus scrofa genomic clone CH242-249M14, genomic su... 44 8.0 1
(BZ986183) PUGFT30TB ZM_0.6_1.0_KB Zea mays genomic clone ZM... 44 8.0 1
(ES405216) MUT06-M09.x1d-t SHGC-MUT Mytilus californianus cD... 44 8.0 1
(EL154191) EB3RODY01C57AM 8-day Arabidopsis seedlings, aeria... 44 8.0 1
(EC332738) GUTF089489P5 POSSUM_01-POSSUM-GUT-2KB Trichosurus... 44 8.0 1
(EC253919) 515227 CK02 Drosophila melanogaster cDNA clone 21... 44 8.0 1
(EC086196) 311592 CK01 Drosophila melanogaster cDNA clone 65... 44 8.0 1
(EC076604) 355555 CK01 Drosophila melanogaster cDNA clone 10... 44 8.0 1
(EC073163) 203510 CK01 Drosophila melanogaster cDNA clone 38... 44 8.0 1
(EC066964) 425948 CK01 Drosophila melanogaster cDNA clone 17... 44 8.0 1
(EB784815) 6940677 KZ69 Danio rerio cDNA clone 2692199, mRNA... 44 8.0 1
(DY893047) CeleSEQ12212 Cunninghamella elegans pBluescript (... 44 8.0 1
(DT418377) JGI_CABJ1575.fwd NIH_XGC_tropSki1 Xenopus (Silura... 44 8.0 1
(DB746026) Apis mellifera head cDNA, RIKEN full-length enric... 44 8.0 1
(DB735196) Apis mellifera head cDNA, RIKEN full-length enric... 44 8.0 1
(CX805309) JGI_CAAJ17139.fwd NIH_XGC_tropBrn2 Xenopus (Silur... 44 8.0 1
(CO344638) EP19641.3prime Exelixis FlyTag CK02 pCDNA-SK+ Dro... 44 8.0 1
(CO267524) EK150651.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr... 44 8.0 1
(CN974949) 24634_125_015_D04 Fundulus Heteroclitus Liver Fun... 44 8.0 1
(CK872218) AGENCOURT_19761234 NIH_ZGC_6 Danio rerio cDNA clo... 44 8.0 1
(CA790287) AGENCOURT_10301346 NICHD_XGC_Emb1 Xenopus laevis ... 44 8.0 1
(AI517256) GH27939.5prime GH Drosophila melanogaster head pO... 44 8.0 1
(BU028917) QHH6D16.yg.ab1 QH_EFGHJ sunflower RHA280 Helianth... 44 8.0 1
(BQ967140) QHB29A23.yg.ab1 QH_ABCDI sunflower RHA801 Heliant... 44 8.0 1
(FK371707) 454GmaGlobSeed106339 Soybean Seeds Containing Glo... 44 8.0 1
(BB090028) Mus musculus 12 days embryo embryonic body betwee... 44 8.0 1
(FF090086) CPAD-aaa73c04.b1 PB2801_EST_CPAD1 Caenorhabditis ... 44 8.0 1
(FE715152) SB03060A2A11.f1 Normalized subtracted Keck-Tagu L... 44 8.0 1
(FE713283) SB03053A1H07.f1 Normalized subtracted Keck-Tagu L... 44 8.0 1
(FC769031) CBBN4796.fwd CBBN Lottia gigantea 3,4,5,6.5d Larv... 44 8.0 1
(FC575247) CAXP1159.fwd CAXP Lottia gigantea from head, foot... 44 8.0 1
(EY495857) CBBP2556.fwd CBBP Hirudo medicinalis hermaphrodit... 44 8.0 1
(EY495701) CBBP2460.fwd CBBP Hirudo medicinalis hermaphrodit... 44 8.0 1
(EY382292) CAXA3959.rev CAXA Helobdella robusta Subtracted L... 44 8.0 1
(EY337912) CAWY8653.fwd CAWY Helobdella robusta Subtracted E... 44 8.0 1
(EY336771) CAWY7900.fwd CAWY Helobdella robusta Subtracted E... 44 8.0 1
(EY335525) CAWY7080.fwd CAWY Helobdella robusta Subtracted E... 44 8.0 1
(EY326952) CAWY1214.fwd CAWY Helobdella robusta Subtracted E... 44 8.0 1
(EY325514) CAWY10979.fwd CAWY Helobdella robusta Subtracted ... 44 8.0 1
(EX290586) 1578604_5_O10_033 PY06 Carica papaya cDNA, mRNA s... 44 8.0 1
(EX275925) 1456949_5_F11_044 PY06 Carica papaya cDNA, mRNA s... 44 8.0 1
(EW769698) ST020021A20A08 Normalized and subtracted western ... 44 8.0 1
(EW769321) ST020019B20A07 Normalized and subtracted western ... 44 8.0 1
(EW768734) ST020007B20E01 Normalized and subtracted western ... 44 8.0 1
(CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 44 8.0 1
(CP000111) Prochlorococcus marinus str. MIT 9312, complete g... 44 8.0 1
(FD024227) CBNI9905.b3 CBNI: Normalized channel catfish cDNA... 40 8.1 2
(AW599711) ga91h05.y1 Moss EST library PPN Physcomitrella pa... 36 8.4 2
(AC008461) Homo sapiens chromosome 5 clone CTC-352D4, WORKIN... 34 8.7 6
(ES543335) Kr_K06_02F21_attB1_seq K06 Euphausia superba cDNA... 34 8.9 2
(BX649113) Homo sapiens mRNA; cDNA DKFZp686K07109 (from clon... 38 8.9 3
(AL512292) Human DNA sequence from clone RP11-292O17 on chro... 34 9.1 7
(EX841550) CBNC10841.fwd CBNC Phycomyces blakesleeanus NRRL1... 36 9.3 2
(EC398557) PT0051a.F10.B7 PT005 Puccinia triticina cDNA clon... 34 9.4 2
(AC068977) Homo sapiens chromosome 13 clone RP11-809O8, WORK... 36 9.7 5
(AC168689) Strongylocentrotus purpuratus clone R3-3014J16, W... 40 9.7 4
(ES543451) Kr_K06_02L10_attB1_seq K06 Euphausia superba cDNA... 32 9.8 3
(AC073174) Homo sapiens chromosome 10 clone RP11-319F12, com... 32 9.9 5

>(AU052860) Dictyostelium discoideum slug cDNA, clone SLF221.
Length = 509

Score = 527 bits (266), Expect(3) = 0.0
Identities = 266/266 (100%)
Strand = Plus / Plus


Query: 496 ggaggatgactatgatcaagaagaagaggataaaattgttgctcagtataaacaattaag 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ggaggatgactatgatcaagaagaagaggataaaattgttgctcagtataaacaattaag 279


Query: 556 agcacaaggtatacctccaaaacatagtaattcaaacgatgaagatgattatgaagatga 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 agcacaaggtatacctccaaaacatagtaattcaaacgatgaagatgattatgaagatga 339


Query: 616 ttcttttaataaaaacacaaccaaaccatatgtacaaaatgaagattccgaagatgaagc 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ttcttttaataaaaacacaaccaaaccatatgtacaaaatgaagattccgaagatgaagc 399


Query: 676 atctgatgaggattatagtgatagtttatctaaaaagagaaaaaatgaacaagatgactc 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 atctgatgaggattatagtgatagtttatctaaaaagagaaaaaatgaacaagatgactc 459


Query: 736 gcatctttcaaagaagagagcttttt 761
||||||||||||||||||||||||||
Sbjct: 460 gcatctttcaaagaagagagcttttt 485

Score = 236 bits (119), Expect(3) = 0.0
Identities = 119/119 (100%)
Strand = Plus / Plus


Query: 360 ttagtaaaccatatgacattttaaatcaaagttatcattctgatgaggatgaagattatg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 ttagtaaaccatatgacattttaaatcaaagttatcattctgatgaggatgaagattatg 143


Query: 420 aaccatcaatgagtgaagatggtggcgatgaaagtttagaggactctgattctcaagct 478
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 aaccatcaatgagtgaagatggtggcgatgaaagtttagaggactctgattctcaagct 202

Score = 151 bits (76), Expect(3) = 0.0
Identities = 76/76 (100%)
Strand = Plus / Plus


Query: 277 taataacagcacaacaaatataaatataggaagtaatactccaggtaaaggtacatttag 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taataacagcacaacaaatataaatataggaagtaatactccaggtaaaggtacatttag 60


Query: 337 acagggtagtaaagag 352
||||||||||||||||
Sbjct: 61 acagggtagtaaagag 76

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,010,765,048
Number of extensions: 65924497
Number of successful extensions: 5961915
Number of sequences better than 10.0: 410
Length of query: 784
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 760
Effective length of database: 99,340,224,878
Effective search space: 75498570907280
Effective search space used: 75498570907280
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.14
Homology vs Protein
Query= Contig-U01292-1 (Contig-U01292-1Q) /CSM_Contig/Contig-U01292-1Q.Seq.d
(784 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

BC090607_1(BC090607|pid:none) Xenopus tropicalis MGC69373 protei... 86 1e-15
BT056577_1(BT056577|pid:none) Salmo salar clone ssal-rgb2-607-35... 86 2e-15
BT059721_1(BT059721|pid:none) Salmo salar clone ssal-rgf-510-310... 85 2e-15
BT073039_1(BT073039|pid:none) Oncorhynchus mykiss clone omyk-evn... 85 3e-15
(P51122) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 84 5e-15
(Q7ZUP0) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 84 7e-15
(Q5ZMN0) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 84 7e-15
DQ000553_1(DQ000553|pid:none) Synthetic construct clone PSF:1090... 84 7e-15
(P39687) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 84 7e-15
AK223280_1(AK223280|pid:none) Homo sapiens mRNA for acidic (leuc... 84 7e-15
AY313452_1(AY313452|pid:none) Coturnix japonica lectin associate... 84 7e-15
BC000608_1(BC000608|pid:none) Homo sapiens acidic (leucine-rich)... 84 7e-15
BC125143_1(BC125143|pid:none) Homo sapiens acidic (leucine-rich)... 84 7e-15
BC073408_1(BC073408|pid:none) Xenopus laevis MGC80871 protein, m... 83 9e-15
BT074840_1(BT074840|pid:none) Osmerus mordax clone omor-eva-515-... 83 1e-14
(Q6PAF6) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 82 1e-14
BT082805_1(BT082805|pid:none) Anoplopoma fimbria clone afim-evh-... 82 1e-14
(Q9V895) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 82 2e-14
BC167942_1(BC167942|pid:none) Xenopus tropicalis hypothetical pr... 81 3e-14
(Q6A1I3) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 81 4e-14
(Q28XE2) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 80 6e-14
(Q5F4A3) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 77 2e-13
U73478_1(U73478|pid:none) Mus musculus acidic nuclear phosphopro... 79 2e-13
BC087686_1(BC087686|pid:none) Rattus norvegicus acidic (leucine-... 79 2e-13
(P49911) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 79 2e-13
(Q3SZC6) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 79 2e-13
DQ083510_1(DQ083510|pid:none) Homo sapiens hepatopoietin PCn127 ... 78 3e-13
(Q92688) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 76 1e-12
Y07969_1(Y07969|pid:none) H.sapiens mRNA for APRIL protein. 76 1e-12
AK223454_1(AK223454|pid:none) Homo sapiens mRNA for acidic (leuc... 76 1e-12
BT059450_1(BT059450|pid:none) Salmo salar clone ssal-rgf-506-287... 76 1e-12
AY812250_1(AY812250|pid:none) Schistosoma japonicum SJCHGC02024 ... 76 1e-12
AY813236_1(AY813236|pid:none) Schistosoma japonicum clone SJCHGC... 76 1e-12
FN319916_1(FN319916|pid:none) Schistosoma japonicum isolate Anhu... 76 1e-12
AY813188_1(AY813188|pid:none) Schistosoma japonicum clone SJCHGC... 76 1e-12
FN319912_1(FN319912|pid:none) Schistosoma japonicum isolate Anhu... 76 1e-12
BT056726_1(BT056726|pid:none) Salmo salar clone ssal-evd-563-112... 76 1e-12
(Q5XIE0) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 75 2e-12
AK088401_1(AK088401|pid:none) Mus musculus 2 days neonate thymus... 75 2e-12
AK223469_1(AK223469|pid:none) Homo sapiens mRNA for acidic (leuc... 75 2e-12
AL138795_4(AL138795|pid:none) Human DNA sequence from clone RP4-... 75 2e-12
AK159446_1(AK159446|pid:none) Mus musculus osteoclast-like cell ... 75 2e-12
(Q86QS6) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 75 2e-12
FN357308_60(FN357308|pid:none) Schistosoma mansoni genome sequen... 75 2e-12
FN357308_58(FN357308|pid:none) Schistosoma mansoni genome sequen... 75 2e-12
AJ720498_1(AJ720498|pid:none) Gallus gallus mRNA for hypothetica... 75 2e-12
FN357308_59(FN357308|pid:none) Schistosoma mansoni genome sequen... 75 2e-12
CR942787_1(CR942787|pid:none) Xenopus tropicalis finished cDNA, ... 75 3e-12
BC160790_1(BC160790|pid:none) Xenopus tropicalis cDNA clone MGC:... 75 3e-12
EF085501_1(EF085501|pid:none) Picea sitchensis clone WS0272_K04 ... 74 5e-12
(Q6NUW5) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 74 7e-12
BT057116_1(BT057116|pid:none) Salmo salar clone ssal-evf-530-242... 73 9e-12
BT057740_1(BT057740|pid:none) Salmo salar clone ssal-evd-518-359... 73 9e-12
(Q7ZY40) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 73 1e-11
FJ984487_1(FJ984487|pid:none) Danio rerio lectin-associated matr... 72 3e-11
AK136648_1(AK136648|pid:none) Mus musculus adult male epididymis... 71 4e-11
(Q9EST5) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 71 4e-11
(Q6YSF3) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 69 1e-10
BT080687_1(BT080687|pid:none) Caligus clemensi clone ccle-evs-51... 69 2e-10
AM472213_1(AM472213|pid:none) Vitis vinifera contig VV78X261640.... 67 6e-10
CP001577_257(CP001577|pid:none) Micromonas sp. RCC299 chromosome... 65 2e-09
AC147964_3(AC147964|pid:none) Medicago truncatula clone mth2-5i1... 65 2e-09
BT046228_1(BT046228|pid:none) Salmo salar clone ssal-evd-507-307... 65 3e-09
FJ984488_1(FJ984488|pid:none) Mus musculus strain C57BL/6 lectin... 64 7e-09
BT073624_1(BT073624|pid:none) Oncorhynchus mykiss clone omyk-evn... 63 9e-09
(O43423) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 63 1e-08
(Q9SCQ7) RecName: Full=Probable acidic leucine-rich nuclear phos... 61 5e-08
U71084_1(U71084|pid:none) Homo sapiens pp32r2 protein (PP32R2) g... 59 2e-07
(O95626) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 59 2e-07
EU976809_1(EU976809|pid:none) Zea mays clone 990721 acidic leuci... 57 5e-07
(Q7Y180) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 55 3e-06
AY460119_1(AY460119|pid:none) Neovison vison proliferation-relat... 54 4e-06
EU976610_1(EU976610|pid:none) Zea mays clone 984884 acidic leuci... 54 4e-06
AK303392_1(AK303392|pid:none) Homo sapiens cDNA FLJ61689 complet... 53 1e-05
CR859095_1(CR859095|pid:none) Pongo abelii mRNA; cDNA DKFZp459A0... 53 1e-05
CT005271_360(CT005271|pid:none) Leishmania major strain Friedlin... 50 8e-05
AM494957_303(AM494957|pid:none) Leishmania braziliensis chromoso... 50 1e-04
(O01615) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 49 2e-04
AM502252_297(AM502252|pid:none) Leishmania infantum chromosome 34. 48 3e-04
DQ207862_1(DQ207862|pid:none) Solanum tuberosum clone 081D11 unk... 47 5e-04
(O62220) RecName: Full=Acidic leucine-rich nuclear phosphoprotei... 47 7e-04
(Q8CDN9) RecName: Full=Leucine-rich repeat-containing protein 9; 47 0.001
FN357369_80(FN357369|pid:none) Schistosoma mansoni genome sequen... 47 0.001
AK019545_1(AK019545|pid:none) Mus musculus adult male testis cDN... 47 0.001
AK029802_1(AK029802|pid:none) Mus musculus adult male testis cDN... 47 0.001
AK340639_1(AK340639|pid:none) Acyrthosiphon pisum ACYPI000509 mR... 47 0.001
(Q6C417) RecName: Full=U2 small nuclear ribonucleoprotein A'; ... 46 0.001
AM502243_179(AM502243|pid:none) Leishmania infantum chromosome 25. 45 0.003
AK039037_1(AK039037|pid:none) Mus musculus adult male hypothalam... 44 0.004
AJ004824_1(AJ004824|pid:none) Salmo salar mRNA for U2 snRNP-spec... 44 0.006
AJ004823_1(AJ004823|pid:none) Salmo salar gene for U2 snRNP-spec... 44 0.006
AM502253_341(AM502253|pid:none) Leishmania infantum chromosome 35. 44 0.006
CP000081_327(CP000081|pid:none) Leishmania major chromosome 35, ... 44 0.008
(A0JM56) RecName: Full=Leucine-rich repeat-containing protein 9; 44 0.008
CP000155_3331(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 43 0.010
FN358832_1(FN358832|pid:none) Schistosoma mansoni genome sequenc... 43 0.013
CR954209_147(CR954209|pid:none) Ostreococcus tauri strain OTTH05... 43 0.013
EF533857_1(EF533857|pid:none) Oryza sativa (indica cultivar-grou... 42 0.017
EF533854_1(EF533854|pid:none) Oryza sativa (indica cultivar-grou... 42 0.017
EF533855_1(EF533855|pid:none) Oryza sativa CI putative NB-ARC do... 42 0.017
EF642097_1(EF642097|pid:none) Oryza rufipogon cultivar W1551 put... 42 0.017
EF642088_1(EF642088|pid:none) Oryza sativa Indica Group cultivar... 42 0.017
CP000348_1167(CP000348|pid:none) Leptospira borgpetersenii serov... 42 0.022
(Q9V4Q8) RecName: Full=Probable U2 small nuclear ribonucleoprote... 42 0.022
BT045924_1(BT045924|pid:none) Salmo salar clone ssal-rgf-536-316... 42 0.022
AK020148_1(AK020148|pid:none) Mus musculus 12 days embryo male w... 42 0.022
AK031338_1(AK031338|pid:none) Mus musculus 13 days embryo male t... 42 0.022
CP000589_130(CP000589|pid:none) Ostreococcus lucimarinus CCE9901... 42 0.022
AJ720043_1(AJ720043|pid:none) Gallus gallus mRNA for hypothetica... 42 0.022
AJ004825_1(AJ004825|pid:none) Salmo salar mRNA for U2 snRNP-spec... 42 0.022
AL773523_5(AL773523|pid:none) Mouse DNA sequence from clone RP23... 42 0.022
(A2AL36) RecName: Full=Centriolin; AltName: Full=110 kDa centros... 42 0.022
BC038386_1(BC038386|pid:none) Mus musculus centrosomal protein 1... 42 0.022
BC158010_1(BC158010|pid:none) Mus musculus centrosomal protein 1... 42 0.022
AK128037_1(AK128037|pid:none) Homo sapiens cDNA FLJ46156 fis, cl... 42 0.029
AC091702_9(AC091702|pid:none) Trypanosoma brucei chromosome 4 cl... 42 0.029
(Q6ZRR7) RecName: Full=Leucine-rich repeat-containing protein 9; 42 0.029
AE014296_805(AE014296|pid:none) Drosophila melanogaster chromoso... 41 0.038
AE014296_806(AE014296|pid:none) Drosophila melanogaster chromoso... 41 0.038
EF642093_1(EF642093|pid:none) Oryza rufipogon cultivar S01010 pu... 41 0.038
AE014296_804(AE014296|pid:none) Drosophila melanogaster chromoso... 41 0.038
EF642100_1(EF642100|pid:none) Oryza rufipogon cultivar W0120 put... 41 0.038
DQ213213_1(DQ213213|pid:none) Taeniopygia guttata clone 0058P006... 41 0.038
CP001332_134(CP001332|pid:none) Micromonas sp. RCC299 chromosome... 41 0.038
BC013777_1(BC013777|pid:none) Mus musculus small nuclear ribonuc... 41 0.049
BC146154_1(BC146154|pid:none) Bos taurus small nuclear ribonucle... 41 0.049
AF230356_1(AF230356|pid:none) Mus musculus U2 small nuclear ribo... 41 0.049
AK223070_1(AK223070|pid:none) Homo sapiens mRNA for small nuclea... 41 0.049
BC095242_1(BC095242|pid:none) Danio rerio zgc:136338, mRNA (cDNA... 41 0.049
EU583475_1(EU583475|pid:none) Ovis aries SNPRA1 mRNA, complete c... 41 0.049
(P57784) RecName: Full=U2 small nuclear ribonucleoprotein A'; ... 41 0.049
AF513978_1(AF513978|pid:none) Homo sapiens CENTRIOLIN mRNA, comp... 40 0.065
AB172794_1(AB172794|pid:none) Macaca fascicularis brain cDNA clo... 40 0.065
AL137068_2(AL137068|pid:none) Human DNA sequence from clone RP11... 40 0.065
CP001407_472(CP001407|pid:none) Bacillus cereus 03BB102, complet... 40 0.065
AK223110_1(AK223110|pid:none) Homo sapiens mRNA for small nuclea... 40 0.065
BC137284_1(BC137284|pid:none) Homo sapiens centrosomal protein 1... 40 0.084
CT005264_176(CT005264|pid:none) Leishmania major strain Friedlin... 40 0.084
BC161888_1(BC161888|pid:none) Rattus norvegicus hypothetical pro... 40 0.084
AK128098_1(AK128098|pid:none) Homo sapiens cDNA FLJ46219 fis, cl... 40 0.084
(Q9BLB6) RecName: Full=Probable U2 small nuclear ribonucleoprote... 40 0.084
FN376191_2(FN376191|pid:none) Schistosoma mansoni genome sequenc... 40 0.11
CR940347_791(CR940347|pid:none) Theileria annulata strain Ankara... 39 0.14
BC102655_1(BC102655|pid:none) Bos taurus leucine rich repeat con... 39 0.14
AK290078_1(AK290078|pid:none) Homo sapiens cDNA FLJ75425 complet... 39 0.19
AJ004808_2(AJ004808|pid:none) Listeria ivanovii i-inlB, i-inlJ, ... 39 0.19
(Q9Y8G3) RecName: Full=mRNA export factor mex67; &AF055036_1(AF... 39 0.19
AE016823_1466(AE016823|pid:none) Leptospira interrogans serovar ... 39 0.19
AE1515(AE1515) internalin like protein (LPXTG motif) [imported] ... 39 0.19
AK032921_1(AK032921|pid:none) Mus musculus 12 days embryo male w... 39 0.19
AB168408_1(AB168408|pid:none) Macaca fascicularis testis cDNA cl... 39 0.19
CT005267_388(CT005267|pid:none) Leishmania major strain Friedlin... 39 0.25
AF154916_1(AF154916|pid:none) Chlamydomonas reinhardtii variable... 39 0.25
AK303333_1(AK303333|pid:none) Homo sapiens cDNA FLJ54218 complet... 39 0.25
AE010300_2446(AE010300|pid:none) Leptospira interrogans serovar ... 39 0.25
AK087661_1(AK087661|pid:none) Mus musculus 2 days pregnant adult... 38 0.32
CP000594_356(CP000594|pid:none) Ostreococcus lucimarinus CCE9901... 38 0.32
AK015333_1(AK015333|pid:none) Mus musculus adult male testis cDN... 38 0.32
CP001332_238(CP001332|pid:none) Micromonas sp. RCC299 chromosome... 38 0.32
CP001283_541(CP001283|pid:none) Bacillus cereus AH820, complete ... 38 0.42
BT032915_1(BT032915|pid:none) Drosophila melanogaster IP19927 fu... 38 0.42
(Q4R803) RecName: Full=Leucine-rich repeat-containing protein 67... 38 0.42
(Q32KP2) RecName: Full=Leucine-rich repeat-containing protein 23... 37 0.55
CP000828_1899(CP000828|pid:none) Acaryochloris marina MBIC11017,... 37 0.55
(Q6AYL8) RecName: Full=Leucine-rich repeat and IQ domain-contain... 37 0.55
BT073310_1(BT073310|pid:none) Oncorhynchus mykiss clone omyk-evn... 37 0.55
CP000485_462(CP000485|pid:none) Bacillus thuringiensis str. Al H... 37 0.55
AJ888460_2(AJ888460|pid:none) Listeria ivanovii i-inlF gene, i-i... 37 0.55
CP000001_447(CP000001|pid:none) Bacillus cereus E33L, complete g... 37 0.55
AF497155_1(AF497155|pid:none) Listeria monocytogenes strain FSLJ... 37 0.71
AB276429_1(AB276429|pid:none) Listeria monocytogenes inlA for in... 37 0.71
DQ843823_1(DQ843823|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
FJ617527_1(FJ617527|pid:none) Listeria monocytogenes strain CSUF... 37 0.71
AY436594_1(AY436594|pid:none) Listeria monocytogenes isolate F69... 37 0.71
DQ347766_1(DQ347766|pid:none) Listeria monocytogenes strain FSLF... 37 0.71
AF497163_1(AF497163|pid:none) Listeria monocytogenes strain FSLj... 37 0.71
AB276406_1(AB276406|pid:none) Listeria monocytogenes inlA for in... 37 0.71
DQ347774_1(DQ347774|pid:none) Listeria monocytogenes strain FSLJ... 37 0.71
DQ844366_1(DQ844366|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
FJ024968_1(FJ024968|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
EF558942_1(EF558942|pid:none) Listeria monocytogenes isolate R9 ... 37 0.71
EU408831_1(EU408831|pid:none) Listeria monocytogenes isolate VIM... 37 0.71
EF445918_1(EF445918|pid:none) Listeria monocytogenes clone n4290... 37 0.71
(Q723K6) RecName: Full=Internalin-A; Flags: Precursor; &AE01726... 37 0.71
EF558940_1(EF558940|pid:none) Listeria monocytogenes isolate R7 ... 37 0.71
DQ844405_1(DQ844405|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
FJ024988_1(FJ024988|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
DQ843791_1(DQ843791|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
AB276381_1(AB276381|pid:none) Listeria monocytogenes inlA for in... 37 0.71
FJ024986_1(FJ024986|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
DQ843801_1(DQ843801|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
DQ347771_1(DQ347771|pid:none) Listeria monocytogenes strain FSLJ... 37 0.71
EF558935_1(EF558935|pid:none) Listeria monocytogenes isolate R2 ... 37 0.71
EU408789_1(EU408789|pid:none) Listeria monocytogenes isolate VIM... 37 0.71
FM178788_1(FM178788|pid:none) Listeria monocytogenes inlA gene f... 37 0.71
FJ024991_1(FJ024991|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
FJ025003_1(FJ025003|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
EU408810_1(EU408810|pid:none) Listeria monocytogenes isolate VIM... 37 0.71
EF445913_1(EF445913|pid:none) Listeria monocytogenes clone f2637... 37 0.71
FJ024979_1(FJ024979|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
DQ844359_1(DQ844359|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
AB276428_1(AB276428|pid:none) Listeria monocytogenes inlA for in... 37 0.71
AF497164_1(AF497164|pid:none) Listeria monocytogenes strain FSLC... 37 0.71
DQ844350_1(DQ844350|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
EF445928_1(EF445928|pid:none) Listeria monocytogenes clone f2663... 37 0.71
EF445930_1(EF445930|pid:none) Listeria monocytogenes clone s4295... 37 0.71
FJ617534_1(FJ617534|pid:none) Listeria monocytogenes strain CSUF... 37 0.71
DQ844351_1(DQ844351|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
FJ024993_1(FJ024993|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
EU408808_1(EU408808|pid:none) Listeria monocytogenes isolate VIM... 37 0.71
EU408804_1(EU408804|pid:none) Listeria monocytogenes isolate VIM... 37 0.71
AF497167_1(AF497167|pid:none) Listeria monocytogenes strain FSLX... 37 0.71
DQ844404_1(DQ844404|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
FJ024980_1(FJ024980|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
EF445938_1(EF445938|pid:none) Listeria monocytogenes clone f2695... 37 0.71
DQ843792_1(DQ843792|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
FJ025012_1(FJ025012|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
DQ843822_1(DQ843822|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
BT048480_1(BT048480|pid:none) Salmo salar clone ssal-rgb2-528-21... 37 0.71
FJ024971_1(FJ024971|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
(P25146) RecName: Full=Internalin-A; Flags: Precursor; &AB1129(... 37 0.71
FJ024998_1(FJ024998|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
DQ844375_1(DQ844375|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
AY436593_1(AY436593|pid:none) Listeria monocytogenes isolate J01... 37 0.71
EF445931_1(EF445931|pid:none) Listeria monocytogenes clone s4304... 37 0.71
DQ347776_1(DQ347776|pid:none) Listeria monocytogenes strain FSLR... 37 0.71
FJ025000_1(FJ025000|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
DQ347769_1(DQ347769|pid:none) Listeria monocytogenes strain FSLF... 37 0.71
FJ024994_1(FJ024994|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
DQ844403_1(DQ844403|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
(Q8R1Z4) RecName: Full=Leucine-rich repeat-containing protein 67... 37 0.71
DQ844407_1(DQ844407|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
EF445917_1(EF445917|pid:none) Listeria monocytogenes clone e1123... 37 0.71
FJ024976_1(FJ024976|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
DQ347775_1(DQ347775|pid:none) Listeria monocytogenes strain FSLM... 37 0.71
AB276379_1(AB276379|pid:none) Listeria monocytogenes inlA for in... 37 0.71
DQ132795_1(DQ132795|pid:none) Listeria monocytogenes strain 1040... 37 0.71
FJ024983_1(FJ024983|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
DQ843837_1(DQ843837|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
DQ844376_1(DQ844376|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
FJ024969_1(FJ024969|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
FJ024984_1(FJ024984|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
EF445906_1(EF445906|pid:none) Listeria monocytogenes clone f2666... 37 0.71
DQ843819_1(DQ843819|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
EF445901_1(EF445901|pid:none) Listeria monocytogenes clone e1125... 37 0.71
FM179779_1(FM179779|pid:none) Listeria monocytogenes inlA gene f... 37 0.71
EF445920_1(EF445920|pid:none) Listeria monocytogenes clone n4293... 37 0.71
EU408851_1(EU408851|pid:none) Listeria monocytogenes isolate VIM... 37 0.71
FJ024966_1(FJ024966|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
DQ843789_1(DQ843789|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
FJ024965_1(FJ024965|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
DQ844401_1(DQ844401|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
DQ844408_1(DQ844408|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
DQ844349_1(DQ844349|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
DQ302622_1(DQ302622|pid:none) Listeria monocytogenes strain FSLN... 37 0.71
DQ347813_1(DQ347813|pid:none) Listeria monocytogenes strain FSLJ... 37 0.71
FJ025010_1(FJ025010|pid:none) Listeria monocytogenes strain NRRL... 37 0.71
EF409978_1(EF409978|pid:none) Listeria monocytogenes strain LI05... 37 0.71
(Q53EV4) RecName: Full=Leucine-rich repeat-containing protein 23... 37 0.93
DQ302615_1(DQ302615|pid:none) Listeria monocytogenes strain FSLF... 37 0.93
BT053753_1(BT053753|pid:none) Drosophila melanogaster RH27614 fu... 37 0.93
AE017262_279(AE017262|pid:none) Listeria monocytogenes str. 4b F... 37 0.93
DQ302600_1(DQ302600|pid:none) Listeria monocytogenes strain FSLF... 37 0.93
A29944(A29944;A21123) chaoptin precursor - fruit fly (Drosophila... 37 0.93
AK223535_1(AK223535|pid:none) Homo sapiens mRNA for leucine-rich... 37 0.93
U25451_1(U25451|pid:none) Listeria monocytogenes F4233 internali... 37 0.93
DQ302612_1(DQ302612|pid:none) Listeria monocytogenes strain FSLF... 37 0.93
DQ302604_1(DQ302604|pid:none) Listeria monocytogenes strain FSLF... 37 0.93
BC124249_1(BC124249|pid:none) Danio rerio zgc:153107, mRNA (cDNA... 37 0.93
DQ302606_1(DQ302606|pid:none) Listeria monocytogenes strain FSLF... 37 0.93
(Q5PPX0) RecName: Full=Leucine-rich repeat-containing protein 67... 37 0.93
AP003209_5(AP003209|pid:none) Oryza sativa Japonica Group genomi... 37 0.93
DQ302608_1(DQ302608|pid:none) Listeria monocytogenes strain FSLF... 37 0.93
(P12024) RecName: Full=Chaoptin; AltName: Full=Photoreceptor cel... 37 0.93
AM270317_32(AM270317|pid:none) Aspergillus niger contig An14c010... 37 0.93
AE014297_4131(AE014297|pid:none) Drosophila melanogaster chromos... 36 1.2
DQ347812_1(DQ347812|pid:none) Listeria monocytogenes strain FSLF... 36 1.2
AE014297_4127(AE014297|pid:none) Drosophila melanogaster chromos... 36 1.2
(Q86QS8) RecName: Full=Protein lap4; AltName: Full=Protein scrib... 36 1.2
CP000581_140(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 36 1.2
AE014297_4130(AE014297|pid:none) Drosophila melanogaster chromos... 36 1.2
AY167904_1(AY167904|pid:none) Drosophila melanogaster clone D sc... 36 1.2
AJ252084_1(AJ252084|pid:none) Drosophila melanogaster mRNA for V... 36 1.2
BT015240_1(BT015240|pid:none) Drosophila melanogaster RE02389 fu... 36 1.2
AB178009_2(AB178009|pid:none) Ralstonia solanacearum lrpA, lrpB ... 36 1.2
AB276421_1(AB276421|pid:none) Listeria monocytogenes inlA for in... 36 1.2
AJ271647_1(AJ271647|pid:none) Drosophila melanogaster mRNA for t... 36 1.2
AY228472_1(AY228472|pid:none) Listeria monocytogenes strain F621... 36 1.6
CU928174_570(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 36 1.6
AK049695_1(AK049695|pid:none) Mus musculus 12 days embryo spinal... 36 1.6
AF497166_1(AF497166|pid:none) Listeria monocytogenes strain FSLW... 36 1.6
AE017194_606(AE017194|pid:none) Bacillus cereus ATCC 10987, comp... 36 1.6
T12704(T12704) leucine-rich protein - common sunflower &X81997_... 36 1.6
DQ347777_1(DQ347777|pid:none) Listeria monocytogenes strain FSLR... 36 1.6
AL596090_9(AL596090|pid:none) Mouse DNA sequence from clone RP23... 36 1.6
T27518(T27518)hypothetical protein ZC334.5 - Caenorhabditis eleg... 36 1.6
AM920436_1105(AM920436|pid:none) Penicillium chrysogenum Wiscons... 36 1.6
AL132902_14(AL132902|pid:none) Caenorhabditis elegans YAC Y71A12... 36 1.6
AE016823_807(AE016823|pid:none) Leptospira interrogans serovar C... 36 1.6
AM423539_1(AM423539|pid:none) Vitis vinifera contig VV78X084603.... 36 1.6
AE010300_3319(AE010300|pid:none) Leptospira interrogans serovar ... 36 1.6
(Q9D5E4) RecName: Full=Leucine-rich repeat-containing protein 48... 36 1.6
DQ302632_1(DQ302632|pid:none) Listeria monocytogenes strain FSLS... 35 2.1
DQ302625_1(DQ302625|pid:none) Listeria monocytogenes strain FSLS... 35 2.1
DQ302624_1(DQ302624|pid:none) Listeria monocytogenes strain FSLS... 35 2.1
AE010300_3318(AE010300|pid:none) Leptospira interrogans serovar ... 35 2.1
AY534123_4(AY534123|pid:none) Aegilops tauschii transposons Casp... 35 2.1
AP005473_12(AP005473|pid:none) Oryza sativa Japonica Group genom... 35 2.1
AY714865_18(AY714865|pid:none) Uncultured archaeon GZfos35D7 clo... 35 2.1
DQ302597_1(DQ302597|pid:none) Listeria monocytogenes strain FSLE... 35 2.1
DQ302601_1(DQ302601|pid:none) Listeria monocytogenes strain FSLF... 35 2.1
DQ302626_1(DQ302626|pid:none) Listeria monocytogenes strain FSLS... 35 2.1
U77368_2(U77368|pid:none) Listeria monocytogenes internalin (inl... 35 2.1
DQ347768_1(DQ347768|pid:none) Listeria monocytogenes strain FSLF... 35 2.1
CP001574_690(CP001574|pid:none) Micromonas sp. RCC299 chromosome... 35 2.7
AE016877_462(AE016877|pid:none) Bacillus cereus ATCC 14579, comp... 35 2.7
CU928168_655(CU928168|pid:none) Kluyveromyces thermotolerans str... 35 2.7
AM494962_230(AM494962|pid:none) Leishmania braziliensis chromoso... 35 2.7
AY534123_7(AY534123|pid:none) Aegilops tauschii transposons Casp... 35 2.7
BC167624_1(BC167624|pid:none) Xenopus tropicalis hypothetical pr... 35 2.7
CP000099_3228(CP000099|pid:none) Methanosarcina barkeri str. Fus... 35 2.7
(Q4R6X9) RecName: Full=Leucine-rich repeat-containing protein 48... 35 3.5
DQ347784_1(DQ347784|pid:none) Listeria monocytogenes strain FSLR... 35 3.5
U25445_1(U25445|pid:none) Listeria monocytogenes F2365 internali... 35 3.5
CP001576_117(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 35 3.5
CP000227_542(CP000227|pid:none) Bacillus cereus Q1, complete gen... 35 3.5
AE017355_451(AE017355|pid:none) Bacillus thuringiensis serovar k... 35 3.5
FJ025008_2(FJ025008|pid:none) Listeria monocytogenes strain NRRL... 35 3.5
FJ495194_1(FJ495194|pid:none) Listeria monocytogenes strain 4140... 35 3.5
DQ347780_1(DQ347780|pid:none) Listeria monocytogenes strain FSLJ... 35 3.5
FJ025007_2(FJ025007|pid:none) Listeria monocytogenes strain NRRL... 35 3.5
EU441362_1(EU441362|pid:none) Xenopus borealis clone Cpd1.a acid... 35 3.5
EU218512_1(EU218512|pid:none) Drosophila melanogaster strain ZW1... 35 3.5
EU218520_1(EU218520|pid:none) Drosophila melanogaster strain ZW1... 35 3.5
EU218515_1(EU218515|pid:none) Drosophila melanogaster strain ZW1... 35 3.5
CP000962_1769(CP000962|pid:none) Clostridium botulinum A3 str. L... 34 4.6
EF056203_1(EF056203|pid:none) Listeria monocytogenes strain VIMV... 34 4.6
DQ302610_1(DQ302610|pid:none) Listeria monocytogenes strain FSLF... 34 4.6
EU408883_1(EU408883|pid:none) Listeria monocytogenes isolate VIM... 34 4.6
EU408868_1(EU408868|pid:none) Listeria monocytogenes isolate VIM... 34 4.6
(Q2UUI3) RecName: Full=Glucose-repressible alcohol dehydrogenase... 34 4.6
CP000939_1706(CP000939|pid:none) Clostridium botulinum B1 str. O... 34 4.6
AM778955_126(AM778955|pid:none) Microcystis aeruginosa PCC 7806 ... 34 4.6
EU408885_1(EU408885|pid:none) Listeria monocytogenes isolate VIM... 34 4.6
M67471_3(M67471|pid:none) Listeria monocytogenes internalin (inl... 34 4.6
EU408886_1(EU408886|pid:none) Listeria monocytogenes isolate VIM... 34 4.6
DQ302502_1(DQ302502|pid:none) Listeria monocytogenes strain FSLN... 34 4.6
AF121025_1(AF121025|pid:none) Listeria monocytogenes strain 83 i... 34 4.6
CP000728_1668(CP000728|pid:none) Clostridium botulinum F str. La... 34 4.6
EF056206_1(EF056206|pid:none) Listeria monocytogenes strain VIMV... 34 4.6
AM412317_1767(AM412317|pid:none) Clostridium botulinum A str. AT... 34 4.6
DQ302486_1(DQ302486|pid:none) Listeria monocytogenes strain FSLF... 34 4.6
FN392320_888(FN392320|pid:none) Pichia pastoris GS115 chromosome... 34 4.6
(Q6GPJ5) RecName: Full=Leucine-rich repeat-containing protein 40... 34 4.6
DQ302504_1(DQ302504|pid:none) Listeria monocytogenes strain FSLN... 34 4.6
AF121032_1(AF121032|pid:none) Listeria monocytogenes strain 524 ... 34 4.6
(Q6DHL5) RecName: Full=Leucine-rich repeat-containing protein 57... 34 4.6
AF121024_1(AF121024|pid:none) Listeria monocytogenes strain 77 i... 34 4.6
(P25147) RecName: Full=Internalin B; Flags: Precursor; &AC1129(... 34 4.6
(Q0CT27) RecName: Full=Glucose-repressible alcohol dehydrogenase... 34 4.6
CP000155_6247(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 34 4.6
AE016823_806(AE016823|pid:none) Leptospira interrogans serovar C... 34 4.6
AJ720600_1(AJ720600|pid:none) Gallus gallus mRNA for hypothetica... 34 6.0
BT021726_1(BT021726|pid:none) Bos taurus hypothetical protein FL... 34 6.0
AK131476_1(AK131476|pid:none) Homo sapiens cDNA FLJ16644 fis, cl... 34 6.0
AE016823_2169(AE016823|pid:none) Leptospira interrogans serovar ... 34 6.0
CT005267_245(CT005267|pid:none) Leishmania major strain Friedlin... 34 6.0
(P93194) RecName: Full=Receptor-like protein kinase; EC... 34 6.0
U77888_2(U77888|pid:none) Ipomoea nil receptor-like protein kina... 34 6.0
BC118442_1(BC118442|pid:none) Bos taurus leucine rich repeat con... 34 6.0
(A6PVS8) RecName: Full=Leucine-rich repeat and IQ domain-contain... 34 6.0
AE010300_1529(AE010300|pid:none) Leptospira interrogans serovar ... 34 6.0
AY490791_1(AY490791|pid:none) Helianthus annuus clone Ha-NTIR3A ... 34 6.0
(Q6GQN5) RecName: Full=Leucine-rich repeat-containing protein 67... 34 6.0
CP000885_1793(CP000885|pid:none) Clostridium phytofermentans ISD... 34 6.0
(Q6BT60) RecName: Full=U2 small nuclear ribonucleoprotein A'; ... 33 7.9
AE016823_808(AE016823|pid:none) Leptospira interrogans serovar C... 33 7.9
DQ302680_1(DQ302680|pid:none) Listeria monocytogenes strain FSLN... 33 7.9
CP001157_2262(CP001157|pid:none) Azotobacter vinelandii DJ, comp... 33 7.9
DQ302673_1(DQ302673|pid:none) Listeria monocytogenes strain FSLE... 33 7.9
DQ302514_1(DQ302514|pid:none) Listeria monocytogenes strain FSLN... 33 7.9
AC079678_3(AC079678|pid:none) Arabidopsis thaliana chromosome 1 ... 33 7.9
CP001576_554(CP001576|pid:none) Micromonas sp. RCC299 chromosome... 33 7.9
DQ302682_1(DQ302682|pid:none) Listeria monocytogenes strain FSLS... 33 7.9
DQ302681_1(DQ302681|pid:none) Listeria monocytogenes strain FSLS... 33 7.9
DQ302691_1(DQ302691|pid:none) Listeria monocytogenes strain FSLF... 33 7.9
AK100368_1(AK100368|pid:none) Oryza sativa Japonica Group cDNA c... 33 7.9
DQ302674_1(DQ302674|pid:none) Listeria monocytogenes strain FSLF... 33 7.9
EF678258_1(EF678258|pid:none) Picea sitchensis clone WS02910_D20... 33 7.9
DQ302678_1(DQ302678|pid:none) Listeria monocytogenes strain FSLF... 33 7.9
DQ302683_1(DQ302683|pid:none) Listeria monocytogenes strain FSLS... 33 7.9
AF054827_1(AF054827|pid:none) Caenorhabditis elegans leucine-ric... 33 7.9
U77367_1(U77367|pid:none) Listeria monocytogenes internalin (inl... 33 7.9
AB1126(AB1126) internalin, peptidoglycan bound protein (LPxTG mo... 33 7.9
DQ302684_1(DQ302684|pid:none) Listeria monocytogenes strain FSLS... 33 7.9
AE010300_3317(AE010300|pid:none) Leptospira interrogans serovar ... 33 7.9

>BC090607_1(BC090607|pid:none) Xenopus tropicalis MGC69373 protein,
mRNA (cDNA clone MGC:69373 IMAGE:5335185), complete cds.
Length = 267

Score = 85.9 bits (211), Expect = 1e-15
Identities = 46/88 (52%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Frame = +3

Query: 3 ELNDNRISGGLSVLSD-FEKLESLSLSGNQIKTLGDLEPLGNLQSLQFLDLFACPVTLLP 179
EL+DNRISGGL VL++ L L+LSGN+IK + LEPL L+SL+ LDLF C VT L
Sbjct: 70 ELSDNRISGGLDVLAEKLSNLTHLNLSGNKIKDISTLEPLKKLESLKSLDLFNCEVTNLN 129

Query: 180 NYSKELFSMIKSLVALDGYDINGKEIED 263
+Y + +F ++ L LDGYD KE D
Sbjct: 130 DYRESVFKLLPQLTYLDGYDREDKEAPD 157

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 796,836,724
Number of extensions: 11002388
Number of successful extensions: 32116
Number of sequences better than 10.0: 396
Number of HSP's gapped: 31914
Number of HSP's successfully gapped: 484
Length of query: 261
Length of database: 1,051,180,864
Length adjustment: 126
Effective length of query: 135
Effective length of database: 643,374,430
Effective search space: 86855548050
Effective search space used: 86855548050
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.75 gvh: 0.55 alm: 0.39 top: 0.53 tms: 0.00 mit: 0.15 mip: 0.00
nuc: 0.17 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.50 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

48.0 %: nuclear
32.0 %: cytoplasmic
8.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: vesicles of secretory system
4.0 %: endoplasmic reticulum

>> prediction for Contig-U01292-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 1
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0