NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U00222-1
Contig ID Contig-U00222-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U00222-1 (Contig-U00222-1Q) /CSM_Contig/Contig-U00222-1Q.Seq.d
AAAATAAAAAATGGAATCAAAGTATGTTTTGTCAACTGAAAAAGAATCAA
AAACAAAGCCATCCGGAAGAGTTAATGTTTCAGATATGGATTCAATTTCA
AATTCATTATCAAAAACTTCACTTGGAACAAGAAAAGTGCCAACATCATT
AAAAACTGATGCATCAAGAAGTGGTTTAAGTTCAGGTGGTAGTAAAACAC
ATATATCAGATGAAAGTGCATTAAGAATGGTTTATGGTAGTACCCCAAGA
GATGAAAAAACAACTACTACAAAAGATTCAATAACACTTGCAAAAGAAAA
AGAAAAAAAAATTGAAAAAAGAAATGAAGAAATTAAATTAACATTTAAAG
CAATTAGAGCATCGGAGTGTGTTGATTTATTATTTATTGTTGATTGTACT
GGTTCAATGGATCCATATATTGAACAAATAAAGAGTGATATTGTAAAATT
ACAAGAAGCATTAAAATTAAAACATTCATTTTTAGATATTGAATTTGGTT
TTATTCGTTATACTGATTTCGATGTAGCATCAAACAGATGTTCAACTTTT
CAATTCTCTCGTTCCACTGTAGAATTTGTTAGATTTGTTTCTGAAATTGG
AGCAGGTGGTGGTGCTGATGGTCCTGA----------AATTGACGAACAT
GGTAAGAAAGTAGTTCTTAAACAATCAAAATATATTGGTGGTAGAGAAAA
TTCAAAGAAAAGATATTTTGAATCAATGGAATGTCAAACTGTTGCTGCAA
AATTTGCACTTGAATTTAATAAACAATTATCATTAACTTCGAGTGAACAT
CAAATTACATTCACTGTTGCAAAAGTCTTACAAATGAAACATTCTGAAAA
ACCAATGTATTTTGGGATTGAAACATTTATCAATGGTGAATATCAAAAAT
ACAATAGTAATTGTGGTTGGTTAAAAGATGATGCAATGTCTGAAATACTT
CAAACATTCTCTCATTGGACATATCAAGAATCAAAAAAATAAAGCAATTG
TAGTCGATATTCAAGGTGTCAAAACCTCAAAAGGTTATTTATTAACGTGA
TCCAGCAATTCATTCCACTGATACATTAAGATTTGGAAGTTGTAACCTTG
GTAAACCTGGTATAATTAAATTCTTTCAATCACATAAATGTAATCAACAT
TGTAAAAAATTAGGTTTAACCATTCCATCTTTTACTTCTTCATCCTCCAC
ATCATCTTCCTCCCGTTCCACATCATCTTCCTCTTCTATTTCATATTCTT
ATAATAAACAAATAAAAAACTATCACAATAAAAAAA
Gap gap included
Contig length 1276
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 1528674
End point 1527396
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 4
Link to clone list U00222
List of clone(s) 

est1=AFO635F,1,628
est2=AFD528F,7,443
est3=AFO635Z,629,1278
est4=AFD528Z,969,1274
Translated Amino Acid sequence 
k*KMESKYVLSTEKESKTKPSGRVNVSDMDSISNSLSKTSLGTRKVPTSLKTDASRSGLS
SGGSKTHISDESALRMVYGSTPRDEKTTTTKDSITLAKEKEKKIEKRNEEIKLTFKAIRA
SECVDLLFIVDCTGSMDPYIEQIKSDIVKLQEALKLKHSFLDIEFGFIRYTDFDVASNRC
STFQFSRSTVEFVRFVSEIGAGGGADGP---

---IDEHGKKVVLKQSKYIGGRENSKKRYFESMECQTVAAKFALEFNKQLSLTSSEHQIT
FTVAKVLQMKHSEKPMYFGIETFINGEYQKYNSNCGWLKDDAMSEILQTFSHWTYQESKK
*sncsrysrcqnlkrlfinviqqfiplih*dlevvtlvnlv*lnsfnhinvinivkn*v*
pfhllllhpphhlppvphhlpllfhiliink*ktitikk
Translated Amino Acid sequence (All Frames) 
Frame A:
kikngikvcfvn*kriknkairks*cfrygfnfkfiiknftwnkksaniikn*cikkwfk
frw**ntyir*kciknglw*ypkr*knnyykrfnntckrkrkkn*kkk*rn*ini*sn*s
igvc*fiiyc*lywfngsiy*tnke*yckitrsikiktfifry*iwfysly*frcsikqm
fnfsilsfhcric*icf*nwsrwwc*ws*---

---n*rtw*esss*tikiyww*rkfkekif*ingmsnccckict*i**tiiinfe*tsny
ihccksltnetf*ktnvfwd*niyqw*iskiq**lwlvkr*cnv*ntsnilsldisrikk
ikql*sifkvskpqkviy*rdpaihstdtlrfgscnlgkpgiikffqshkcnqhckklgl
tipsftsssstssssrstsssssisysynkqiknyhnkk

Frame B:
k*KMESKYVLSTEKESKTKPSGRVNVSDMDSISNSLSKTSLGTRKVPTSLKTDASRSGLS
SGGSKTHISDESALRMVYGSTPRDEKTTTTKDSITLAKEKEKKIEKRNEEIKLTFKAIRA
SECVDLLFIVDCTGSMDPYIEQIKSDIVKLQEALKLKHSFLDIEFGFIRYTDFDVASNRC
STFQFSRSTVEFVRFVSEIGAGGGADGP---

---IDEHGKKVVLKQSKYIGGRENSKKRYFESMECQTVAAKFALEFNKQLSLTSSEHQIT
FTVAKVLQMKHSEKPMYFGIETFINGEYQKYNSNCGWLKDDAMSEILQTFSHWTYQESKK
*sncsrysrcqnlkrlfinviqqfiplih*dlevvtlvnlv*lnsfnhinvinivkn*v*
pfhllllhpphhlppvphhlpllfhiliink*ktitikk

Frame C:
nkkwnqsmfcqlkknqkqshpeelmfqiwiqfqihyqklhleqekcqhh*klmhqevv*v
qvvvkhiyqmkvh*ewfmvvpqemkkqllqkiq*hlqkkkkkklkkemkkln*hlkqleh
rsvliyylllivlvqwihilnk*rvil*nykkh*n*nihf*ilnlvlfvilism*hqtdv
qlfnslvpl*nlldlflkleqvvvlmvl---

---ltnmvrk*flnnqnilvvekiqrkdilnqwnvklllqnlhlnlinnyh*lrvniklh
sllqksyk*nilknqcilglkhlsmvnikntivivvg*kmmqclkyfkhslighiknqkn
kaivvdiqgvktskgyllt*ssnsfh*yikiwkl*pw*twyn*ilsit*m*stl*kirfn
hsifyffilhiiflpfhiiflfyfifl**tnkklsq*k
own update 2004. 6.21
Homology vs CSM-cDNA 
Query= Contig-U00222-1 (Contig-U00222-1Q)
/CSM_Contig/Contig-U00222-1Q.Seq.d
         (1286 letters)

Database: CSM
           8402 sequences; 8,075,542 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U00222-1 (Contig-U00222-1Q) /CSM_Contig/Conti...  1792  0.0
Contig-U06430-1 (Contig-U06430-1Q) /CSM_Contig/Conti...    44  5e-04
Contig-U16496-1 (Contig-U16496-1Q) /CSM_Contig/Conti...    38  0.033
Contig-U16277-1 (Contig-U16277-1Q) /CSM_Contig/Conti...    38  0.033
Contig-U16195-1 (Contig-U16195-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U15822-1 (Contig-U15822-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U13905-1 (Contig-U13905-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U12100-1 (Contig-U12100-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U10762-1 (Contig-U10762-1Q) /CSM_Contig/Conti...    36  0.13
Contig-U09415-1 (Contig-U09415-1Q) /CSM_Contig/Conti...    36  0.13

>Contig-U00222-1 (Contig-U00222-1Q) /CSM_Contig/Contig-U00222-1Q.Seq.d
          Length = 1286

 Score = 1792 bits (904), Expect = 0.0
 Identities = 948/955 (99%)
 Strand = Plus / Plus

                                                                        
Query: 325  tgaagaaattaaattaacatttaaagcaattagagcatcggagtgtgttgatttattatt 384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325  tgaagaaattaaattaacatttaaagcaattagagcatcggagtgtgttgatttattatt 384

                                                                        
Query: 385  tattgttgattgtactggttcaatggatccatatattgaacaaataaagagtgatattgt 444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385  tattgttgattgtactggttcaatggatccatatattgaacaaataaagagtgatattgt 444

                                                                        
Query: 445  aaaattacaagaagcattaaaattaaaacattcatttttagatattgaatttggttttat 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445  aaaattacaagaagcattaaaattaaaacattcatttttagatattgaatttggttttat 504

                                                                        
Query: 505  tcgttatactgatttcgatgtagcatcaaacagatgttcaacttttcaattctctcgttc 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505  tcgttatactgatttcgatgtagcatcaaacagatgttcaacttttcaattctctcgttc 564

                                                                        
Query: 565  cactgtagaatttgttagatttgtttctgaaattggagcaggtggtggtgctgatggtcc 624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565  cactgtagaatttgttagatttgtttctgaaattggagcaggtggtggtgctgatggtcc 624

                                                                        
Query: 625  tgannnnnnnnnnaattgacgaacatggtaagaaagtagttcttaaacaatcaaaatata 684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625  tgannnnnnnnnnaattgacgaacatggtaagaaagtagttcttaaacaatcaaaatata 684

                                                                        
Query: 685  ttggtggtagagaaaattcaaagaaaagatattttgaatcaatggaatgtcaaactgttg 744
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685  ttggtggtagagaaaattcaaagaaaagatattttgaatcaatggaatgtcaaactgttg 744

                                                                        
Query: 745  ctgcaaaatttgcacttgaatttaataaacaattatcattaacttcgagtgaacatcaaa 804
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745  ctgcaaaatttgcacttgaatttaataaacaattatcattaacttcgagtgaacatcaaa 804

                                                                        
Query: 805  ttacattcactgttgcaaaagtcttacaaatgaaacattctgaaaaaccaatgtattttg 864
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805  ttacattcactgttgcaaaagtcttacaaatgaaacattctgaaaaaccaatgtattttg 864

                                                                        
Query: 865  ggattgaaacatttatcaatggtgaatatcaaaaatacaatagtaattgtggttggttaa 924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865  ggattgaaacatttatcaatggtgaatatcaaaaatacaatagtaattgtggttggttaa 924

                                                                        
Query: 925  aagatgatgcaatgtctgaaatacttcaaacattctctcattggacatatcaagaatcnn 984
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 925  aagatgatgcaatgtctgaaatacttcaaacattctctcattggacatatcaagaatcaa 984

                                                                        
Query: 985  nnnnntaaagcaattgtagtcgatattcaaggtgtcaaaacctcaaaaggttatttatta 1044
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985  aaaaataaagcaattgtagtcgatattcaaggtgtcaaaacctcaaaaggttatttatta 1044

                                                                        
Query: 1045 acgtgatccagcaattcattccactgatacattaagatttggaagttgtaaccttggtaa 1104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 acgtgatccagcaattcattccactgatacattaagatttggaagttgtaaccttggtaa 1104

                                                                        
Query: 1105 acctggtataattaaattctttcaatcacataaatgtaatcaacattgtaaaaaattagg 1164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1105 acctggtataattaaattctttcaatcacataaatgtaatcaacattgtaaaaaattagg 1164

                                                                        
Query: 1165 tttaaccattccatcttttacttcttcatcctccacatcatcttcctcccgttccacatc 1224
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165 tttaaccattccatcttttacttcttcatcctccacatcatcttcctcccgttccacatc 1224

                                                                   
Query: 1225 atcttcctcttctatttcatattcttataataaacaaataaaaaactatcacaat 1279
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1225 atcttcctcttctatttcatattcttataataaacaaataaaaaactatcacaat 1279


 Score =  464 bits (234), Expect = e-130
 Identities = 234/234 (100%)
 Strand = Plus / Plus

                                                                       
Query: 58  gccatccggaagagttaatgtttcagatatggattcaatttcaaattcattatcaaaaac 117
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58  gccatccggaagagttaatgtttcagatatggattcaatttcaaattcattatcaaaaac 117

                                                                       
Query: 118 ttcacttggaacaagaaaagtgccaacatcattaaaaactgatgcatcaagaagtggttt 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 ttcacttggaacaagaaaagtgccaacatcattaaaaactgatgcatcaagaagtggttt 177

                                                                       
Query: 178 aagttcaggtggtagtaaaacacatatatcagatgaaagtgcattaagaatggtttatgg 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 aagttcaggtggtagtaaaacacatatatcagatgaaagtgcattaagaatggtttatgg 237

                                                                 
Query: 238 tagtaccccaagagatgaaaaaacaactactacaaaagattcaataacacttgc 291
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tagtaccccaagagatgaaaaaacaactactacaaaagattcaataacacttgc 291


>Contig-U06430-1 (Contig-U06430-1Q) /CSM_Contig/Contig-U06430-1Q.Seq.d
          Length = 554

 Score = 44.1 bits (22), Expect = 5e-04
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 765 tttaataaacaattatcattaa 786
           ||||||||||||||||||||||
Sbjct: 214 tttaataaacaattatcattaa 235


>Contig-U16496-1 (Contig-U16496-1Q) /CSM_Contig/Contig-U16496-1Q.Seq.d
          Length = 2469

 Score = 38.2 bits (19), Expect = 0.033
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                       
Query: 259  aacaactactacaaaagattcaataac 285
            |||||| ||||| ||||||||||||||
Sbjct: 1531 aacaacaactaccaaagattcaataac 1557


  Database: CSM
    Posted date:  Jun 21, 2004 12:56 PM
  Number of letters in database: 8,075,542
  Number of sequences in database:  8402
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 28,327
Number of Sequences: 8402
Number of extensions: 28327
Number of successful extensions: 3752
Number of sequences better than 10.0: 389
length of query: 1286
length of database: 8,075,542
effective HSP length: 16
effective length of query: 1270
effective length of database: 7,941,110
effective search space: 10085209700
effective search space used: 10085209700
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 4.14
Homology vs DNA 
Query= Contig-U00222-1 (Contig-U00222-1Q) /CSM_Contig/Contig-U00222-1Q.Seq.d
         (1286 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AY672633) Dictyostelium discoideum alpha kinase (vwkA) gene...   684   0.0    4
(BJ346230) Dictyostelium discoideum cDNA clone:dda30e10, 3' ...   684   0.0    3
(BJ328970) Dictyostelium discoideum cDNA clone:dda30e10, 5' ...   573   0.0    2
(BJ324839) Dictyostelium discoideum cDNA clone:dda8g07, 5' e...   464   e-180  2
(BJ341820) Dictyostelium discoideum cDNA clone:dda8g07, 3' e...   333   e-128  2
(AC116986) Dictyostelium discoideum chromosome 2 map 2234041...    38   1e-04  14
(AC114075) Rattus norvegicus clone CH230-16E4, *** SEQUENCIN...    40   0.009  2
(AC174358) Medicago truncatula chromosome 8 clone mth2-27k4,...    38   0.031  7
(BX306820) AGENAE Rainbow trout multi-tissues - normalized +...    42   0.043  2
(CU074086) AGENAE Rainbow trout multi-tissues library (tcce)...    42   0.043  2
(CX720282) 1327127 NCCCWA 09RT Oncorhynchus mykiss cDNA clon...    42   0.044  2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175...    32   0.044  17
(BX297909) AGENAE Rainbow trout multi-tissues - normalized +...    42   0.045  2
(CX066838) 1321127 NCCCWA 04RT Oncorhynchus mykiss cDNA clon...    42   0.045  2
(AL954296) Mouse DNA sequence from clone RP23-272P2 on chrom...    52   0.054  1
(AP008043) Lotus japonicus genomic DNA, chromosome 1, clone:...    38   0.075  8
(AM180355) Clostridium difficile 630 complete genome.              34   0.093  22
(FD782138) 03PA2_T7_032_F09_08AUG2005_069 03PA2 Phaseolus an...    36   0.16   2
(FD655353) MF1_144_A08.b1_F001 Limnanthes alba EST Library M...    40   0.17   2
(AC022995) Homo sapiens chromosome 2 clone RP11-764L16 map 2...    36   0.20   8
(AC202588) Medicago truncatula clone mth2-45g3, WORKING DRAF...    40   0.20   6
(BH133328) ENTND59TF Entamoeba histolytica Sheared DNA Entam...    36   0.21   3
(CU914206) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    50   0.21   1
(FH342501) CHO_OF4624xc04r1.ab1 CHO_OF4 Nicotiana tabacum ge...    50   0.21   1
(CV443254) EST897167 BEA Rhipicephalus microplus cDNA clone ...    50   0.21   1
(GD347238) 454PCEP0057395 Scarlet Runner Bean globular-stage...    50   0.21   1
(FG303783) MPOAE49TR B. bovis infected B. microplus Ovary 40...    50   0.21   1
(CR382130) Yarrowia lipolytica strain CLIB122 chromosome D c...    34   0.39   2
(AC009297) Homo sapiens BAC clone RP11-3E14 from 2, complete...    38   0.45   5
(AC216389) Oryza punctata clone OP__Ba0079P19, *** SEQUENCIN...    38   0.47   2
(AC185365) Muntiacus muntjak vaginalis clone CH244-114L17, W...    34   0.47   2
(AC191469) Muntiacus reevesi clone CH245-307M6, WORKING DRAF...    34   0.47   2
(AC229796) Oryza minuta clone OM__Ba0017E21, *** SEQUENCING ...    38   0.48   2
(AC135957) Oryza sativa Japonica Group chromosome 11 clone O...    38   0.48   2
(AC229914) Oryza minuta clone OM__Ba0079N04, complete sequence.    38   0.48   2
(AC231854) Oryza minuta clone OM__Ba0205J09, *** SEQUENCING ...    38   0.49   2
(EA688919) Sequence 67798 from patent US 7365185.                  38   0.52   2
(FE176544) LV_NC_RA01D21r Litopenaeus vannamei nerve cord cD...    38   0.61   2
(CW690517) OG_BBa0051N19.r OG_BBa Oryza glaberrima genomic c...    38   0.61   2
(CB668521) OSJNEd16G16.f OSJNEd Oryza sativa Japonica Group ...    38   0.61   2
(CF307224) HDA1--06-B17.g1 OsHDAC1-overexpressing transgenic...    38   0.61   2
(AC127571) Mus musculus chromosome 3 clone RP24-227D4, WORKI...    44   0.62   2
(CB640617) OSJNEa15J22.f OSJNEa Oryza sativa Japonica Group ...    38   0.62   2
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    32   0.63   17
(FE056746) LV_ES_RA26B07f Litopenaeus vannamei eyestalk cDNA...    38   0.64   2
(FE056745) LV_ES_RA26P05r Litopenaeus vannamei eyestalk cDNA...    38   0.64   2
(CV468336) est_l_vannamei8022 LvE-stalk Litopenaeus vannamei...    38   0.65   2
(BX649246) Zebrafish DNA sequence from clone DKEY-123M8 in l...    48   0.85   1
(BX088692) Zebrafish DNA sequence from clone CH211-208A20 in...    48   0.85   1
(AC155814) Mus musculus BAC clone RP24-137M22 from chromosom...    48   0.85   1
(AC147121) Mus musculus BAC clone RP24-160L14 from chromosom...    48   0.85   1
(AC129942) Mus musculus chromosome 8, clone RP23-267A22, com...    48   0.85   1
(AC126435) Mus musculus BAC clone RP24-158D10 from chromosom...    48   0.85   1
(AC187498) Rhesus macaque BAC clone CH250-61H12 from chromos...    48   0.85   1
(AC162286) Mus musculus chromosome 5 clone RP23-454P22 map 5...    48   0.85   1
(CR774197) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    48   0.85   1
(BX548252) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    48   0.85   1
(FH944081) CHO_OF6740xm24f1.ab1 CHO_OF6 Nicotiana tabacum ge...    48   0.85   1
(ET992194) CHO_OF771xj23f1.ab1 CHO_OF Nicotiana tabacum geno...    48   0.85   1
(BU514556) AGENCOURT_10116126 NIH_MGC_134 Mus musculus cDNA ...    48   0.85   1
(AX344557) Sequence 8 from Patent WO0200932.                       36   1.2    11
(AP000599) Arabidopsis thaliana genomic DNA, chromosome 3, T...    38   1.2    2
(AC114618) Mus musculus chromosome 3, clone RP24-86C15, comp...    44   1.5    3
(CR931789) Mouse DNA sequence *** SEQUENCING CANCELLED *** f...    32   1.7    2
(AP009595) Solanum lycopersicum DNA, chromosome 8, clone: C0...    36   1.7    6
(AL606987) Mouse DNA sequence from clone RP23-383I4 on chrom...    32   1.7    2
(CU467815) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***...    32   1.7    2
(CR974435) Mouse DNA sequence *** SEQUENCING CANCELLED *** f...    32   1.7    2
(AC116551) Dictyostelium discoideum chromosome 2 map complem...    40   1.9    10
(AG560273) Mus musculus molossinus DNA, clone:MSMg01-479G01....    34   2.3    2
(BM166822) EST569345 PyBS Plasmodium yoelii yoelii cDNA clon...    36   2.3    2
(CS374663) Sequence 766 from Patent WO2006034879.                  40   2.3    3
(AC144594) Danio rerio strain Tue clone CH211-126M8, WORKING...    36   2.7    7
(GO182824) CAGA7799.fwd CAGA Alvinella pompejana Normalized ...    44   3.1    2
(GO182823) CAGA7799.rev CAGA Alvinella pompejana Normalized ...    44   3.2    2
(AU264336) Dictyostelium discoideum vegetative cDNA clone:VS...    36   3.3    2
(GO131581) CAGA24778.rev CAGA Alvinella pompejana Normalized...    44   3.3    2
(BX293556) Zebrafish DNA sequence from clone DKEY-21N20 in l...    46   3.4    1
(AC161603) Mus musculus BAC clone RP23-304M9 from chromosome...    46   3.4    1
(AC125523) Mus musculus BAC clone RP24-376O18 from chromosom...    46   3.4    1
(AY082070) Bacteriophage phi3626, complete genome.                 46   3.4    1
(AL359842) Human DNA sequence from clone RP11-388D4 on chrom...    46   3.4    1
(AC136049) Rattus norvegicus clone CH230-289P15, *** SEQUENC...    46   3.4    1
(AC106285) Rattus norvegicus clone CH230-67I9, WORKING DRAFT...    46   3.4    1
(AC097442) Rattus norvegicus clone CH230-133M20, *** SEQUENC...    46   3.4    1
(AC095863) Rattus norvegicus clone CH230-9N18, *** SEQUENCIN...    46   3.4    1
(AL844506) Plasmodium falciparum chromosome  7.                    46   3.4    1
(AC223206) Bos taurus clone CH240-426F5, WORKING DRAFT SEQUE...    46   3.4    1
(AC180551) Strongylocentrotus purpuratus clone R3-3098B4, WO...    46   3.4    1
(AC173162) Bos taurus clone CH240-411A21, WORKING DRAFT SEQU...    46   3.4    1
(BH165140) ENTSG41TR Entamoeba histolytica Sheared DNA Entam...    46   3.4    1
(FI081469) CHO_OF7075xd06f1.ab1 CHO_OF7 Nicotiana tabacum ge...    46   3.4    1
(FI038137) CHO_OF6458xe08r1.ab1 CHO_OF6 Nicotiana tabacum ge...    46   3.4    1
(FI006262) CHO_OF6899xa07f1.ab1 CHO_OF6 Nicotiana tabacum ge...    46   3.4    1
(FH959697) CHO_OF6771xc18f1.ab1 CHO_OF6 Nicotiana tabacum ge...    46   3.4    1
(FH934917) CHO_NF2034xd07f1.ab1 CHO_NF2 Nicotiana tabacum ge...    46   3.4    1
(FH934602) CHO_NF2036xd15f1.ab1 CHO_NF2 Nicotiana tabacum ge...    46   3.4    1
(FH933589) CHO_NF2035xh05f1.ab1 CHO_NF2 Nicotiana tabacum ge...    46   3.4    1
(FH930615) CHO_NF2019xp15f1.ab1 CHO_NF2 Nicotiana tabacum ge...    46   3.4    1
(FH898093) CHO_ONF055xp12f1.ab1 CHO_ONF Nicotiana tabacum ge...    46   3.4    1
(FH613343) CHO_OF4623xh23r1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   3.4    1
(FH604708) CHO_OF4639xc20f1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   3.4    1
(FH587701) CHO_OF4904xp15f1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   3.4    1
(FH504403) CHO_OF4179xd23f1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   3.4    1
(FH495471) CHO_OF4611xi11r1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   3.4    1
(FH437875) CHO_OF4999xc12f1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   3.4    1
(FH413320) CHO_OF4858xi21f1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   3.4    1
(FH299303) CHO_OF4237xl12f1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   3.4    1
(FH289387) CHO_OF4198xk12r1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   3.4    1
(FH222097) CHO_OF3380xp18r1.ab1 CHO_OF3 Nicotiana tabacum ge...    46   3.4    1
(FH214740) CHO_OF3373xd19r1.ab1 CHO_OF3 Nicotiana tabacum ge...    46   3.4    1
(FH146250) CHO_OF3876xh24f1.ab1 CHO_OF3 Nicotiana tabacum ge...    46   3.4    1
(FH108728) CHO_OF3038xl05f1.ab1 CHO_OF3 Nicotiana tabacum ge...    46   3.4    1
(FH095462) CHO_OF3035xl22r1.ab1 CHO_OF3 Nicotiana tabacum ge...    46   3.4    1
(FH029228) CHO_OF3177xa03r1.ab1 CHO_OF3 Nicotiana tabacum ge...    46   3.4    1
(ET968035) CHO_OF036xd09r1.ab1 CHO_OF Nicotiana tabacum geno...    46   3.4    1
(ET961183) CHO_OF592xg05f1.ab1 CHO_OF Nicotiana tabacum geno...    46   3.4    1
(ET925968) CHO_OF226xg13f1.ab1 CHO_OF Nicotiana tabacum geno...    46   3.4    1
(ET908764) CHO_OF345xb01r1.ab1 CHO_OF Nicotiana tabacum geno...    46   3.4    1
(ET868722) CHO_OF455xd13r1.ab1 CHO_OF Nicotiana tabacum geno...    46   3.4    1
(ET804082) CHO_OF705xi09f1.ab1 CHO_OF Nicotiana tabacum geno...    46   3.4    1
(ET795363) CHO_OF661xm11f1.ab1 CHO_OF Nicotiana tabacum geno...    46   3.4    1
(ET787914) CHO_OF639xh08f1.ab1 CHO_OF Nicotiana tabacum geno...    46   3.4    1
(ER466233) 1092963924178 Global-Ocean-Sampling_GS-35-01-01-1...    46   3.4    1
(DX531246) GH_MBb0037K10r GH_MBb Gossypium hirsutum genomic ...    46   3.4    1
(DH702275) Rattus norvegicus DNA, BAC clone: RNB1-262O15, 3'...    46   3.4    1
(DW560389) EST_ssal_rgb2_24808 rgb2 Salmo salar cDNA clone s...    46   3.4    1
(CU524549) Theobroma cacao, mRNA sequence (KZ0ACB5YA09FM1).        46   3.4    1
(CU519638) Theobroma cacao, mRNA sequence (KZ0ABH6YH09FM1).        46   3.4    1
(CU496264) Theobroma cacao, mRNA sequence (KZ0ACAP1YG20FM1).       46   3.4    1
(CF449815) EST686160 normalized cDNA library of onion Allium...    46   3.4    1
(CF436585) EST672930 normalized cDNA library of onion Allium...    46   3.4    1
(BP525960) Nicotiana tabacum cDNA, clone: BY10658, primer: M...    46   3.4    1
(BM274835) PfESToaa75f03.y1 Plasmodium falciparum 3D7 gameto...    46   3.4    1
(BI450884) kt78h02.y4 Strongyloides ratti L2 SL1 TOPO v2 Str...    46   3.4    1
(BG301637) kt03e12.y1 Strongyloides ratti L1 SL1 Topo1 Chiap...    46   3.4    1
(BG301446) kt01c04.y1 Strongyloides ratti L1 SL1 Topo1 Chiap...    46   3.4    1
(BG301431) kt04c04.y1 Strongyloides ratti L1 SL1 Topo1 Chiap...    46   3.4    1
(GE772980) EST_ssal_rgf_840769 ssalrgf mixed_tissue full-len...    46   3.4    1
(GD577446) 454PCS0205137 Scarlet Runner Bean globular-stage ...    46   3.4    1
(FG140221) AGN_ELP022xd06f1.ab1 AGN_ELP Nicotiana tabacum cD...    46   3.4    1
(FC821671) Sr_TOPOR_019n15_TOPOR S. ratti mixed stage TOPO S...    46   3.4    1
(FC821521) Sr_TOPOR_019g01_TOPOR S. ratti mixed stage TOPO S...    46   3.4    1
(FC821452) Sr_TOPOR_019b22_TOPOR S. ratti mixed stage TOPO S...    46   3.4    1
(FC821446) Sr_TOPOR_019b13_TOPOR S. ratti mixed stage TOPO S...    46   3.4    1
(FC821053) Sr_TOPOF_19n15_TOPOF S. ratti mixed stage TOPO St...    46   3.4    1
(FC820891) Sr_TOPOF_19g01_TOPOF S. ratti mixed stage TOPO St...    46   3.4    1
(FC820806) Sr_TOPOF_19b22_TOPOF S. ratti mixed stage TOPO St...    46   3.4    1
(FC820798) Sr_TOPOF_19b13_TOPOF S. ratti mixed stage TOPO St...    46   3.4    1
(EY175932) CBTI5310.b1_L08.ab1:P Triphysaria pusilla root ti...    46   3.4    1
(EY171714) CBTI3337.b1_A20.ab1:P Triphysaria pusilla root ti...    46   3.4    1
(AC195650) Mus musculus BAC clone CH36-431D21 from chromosom...    38   3.4    7
(ED716844) GM_WBb0066N04.r GM_WBb Glycine max genomic clone ...    42   3.4    2
(GH000426) G1220P118RN11.T0 Neurospora crassa cDNA - 1 hour ...    36   3.4    2
(GO131582) CAGA24778.fwd CAGA Alvinella pompejana Normalized...    44   3.4    2
(GE998659) G1220P120FC23.T0 Neurospora crassa cDNA - 1 hour ...    36   3.6    2
(EJ555624) 1092959493330 Global-Ocean-Sampling_GS-29-01-01-1...    38   3.7    2
(CT035995) Sus scrofa genomic clone CH242-20M21, genomic sur...    38   4.0    2
(CZ509461) GMW2-66N4a.g1 GMW2 Glycine max genomic, genomic s...    42   4.0    2
(CZ516169) GMW2-66N4a.g2 GMW2 Glycine max genomic, genomic s...    42   4.0    2
(BX088729) Mouse DNA sequence from clone RP24-69K11 on chrom...    44   4.0    5
(AC099723) Mus musculus chromosome 8, clone RP23-369P21, com...    44   4.1    3
(AC017875) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    42   4.1    3
(BA000026) Mycoplasma penetrans HF-2 DNA, complete genome.         40   4.4    20
(Z97336) Arabidopsis thaliana DNA chromosome 4, ESSA I FCA c...    38   4.5    7
(AL671536) Mouse DNA sequence from clone RP23-291O10 on chro...    36   4.6    4
(AC164589) Mus musculus chromosome 8, clone RP24-363C11, com...    44   4.6    3
(CR925824) Zebrafish DNA sequence from clone DKEYP-66E4 in l...    34   4.6    9
(AC157226) Bos taurus clone CH240-45C4, WORKING DRAFT SEQUEN...    44   5.7    3
(AP009598) Solanum lycopersicum DNA, chromosome 8, clone: C0...    34   5.9    7
(CU104724) Zebrafish DNA sequence from clone CH73-149C21 in ...    36   6.0    5
(AL163283) Homo sapiens chromosome 21 segment HS21C083.            34   6.0    2
(AC130093) Rattus norvegicus clone CH230-223K13, WORKING DRA...    34   6.1    2
(AC111832) Rattus norvegicus clone CH230-278M9, WORKING DRAF...    34   6.1    2
(AC153438) Bos taurus clone CH240-20M11, WORKING DRAFT SEQUE...    32   6.2    2
(CR751561) Mouse DNA sequence *** SEQUENCING CANCELLED *** f...    32   6.2    2
(BX936307) Mouse DNA sequence *** SEQUENCING IN PROGRESS ***...    32   6.2    2
(AC164967) Bos taurus clone CH240-161N24, WORKING DRAFT SEQU...    32   6.2    2
(CU062436) Mouse DNA sequence from clone RP24-455K23 on chro...    32   6.3    2
(L63545) Lymphocystis disease virus 1, complete genome.            34   6.3    5
(AL954334) Mouse DNA sequence from clone RP24-93B5 on chromo...    32   6.4    2
(AF165176) Homo sapiens chromosome 21q22.3 PAC B02270, compl...    34   6.4    2
(AF064864) Homo sapiens chromosome 21q22.3 PAC 21L13, comple...    34   6.4    2
(AP004956) Lotus japonicus genomic DNA, chromosome 1, clone:...    34   6.4    2
(BP636606) Arabidopsis thaliana cDNA clone:RAFL19-01-C13, 3'...    34   6.8    2
(AC073987) Homo sapiens BAC clone RP11-441C24 from 2, comple...    36   7.0    5
(DX491619) Cpl33440 Papaya Genomic DNA BAC Library Carica pa...    40   7.0    2
(AY232268) Dictyostelium discoideum putative protein Roco6 (...    42   7.0    3
(CU694566) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    38   7.7    6
(AC122169) Medicago truncatula clone mth2-9m5, complete sequ...    38   8.1    6
(DX559302) GH_MBb0083M15f GH_MBb Gossypium hirsutum genomic ...    32   8.2    2
(AC174297) Medicago truncatula clone mth2-73p24, complete se...    34   8.3    7
(EJ089598) 1095460154838 Global-Ocean-Sampling_GS-26-01-01-1...    32   8.4    2
(BI787619) sai47g05.y1 Gm-c1065 Glycine max cDNA clone GENOM...    36   8.4    2
(EY333513) CAWY574.rev CAWY Helobdella robusta Subtracted Ea...    34   8.4    2
(EG544570) RrLX1a19g14f1 1YR+I Rutilus rutilus cDNA clone 19...    34   8.6    2
(CU855676) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   9.3    8
(CS468860) Sequence 51 from Patent EP1748080.                      36   9.5    5
(CS419337) Sequence 51 from Patent WO2006094836.                   36   9.5    5
(BX640578) Mouse DNA sequence from clone RP23-261L3 on chrom...    40   9.9    7

>(AY672633) Dictyostelium discoideum alpha kinase (vwkA) gene,
            complete cds.
          Length = 2199

 Score =  684 bits (345), Expect(4) = 0.0
 Identities = 345/345 (100%)
 Strand = Plus / Plus


Query: 638  aattgacgaacatggtaagaaagtagttcttaaacaatcaaaatatattggtggtagaga 697
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1363 aattgacgaacatggtaagaaagtagttcttaaacaatcaaaatatattggtggtagaga 1422


Query: 698  aaattcaaagaaaagatattttgaatcaatggaatgtcaaactgttgctgcaaaatttgc 757
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1423 aaattcaaagaaaagatattttgaatcaatggaatgtcaaactgttgctgcaaaatttgc 1482


Query: 758  acttgaatttaataaacaattatcattaacttcgagtgaacatcaaattacattcactgt 817
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1483 acttgaatttaataaacaattatcattaacttcgagtgaacatcaaattacattcactgt 1542


Query: 818  tgcaaaagtcttacaaatgaaacattctgaaaaaccaatgtattttgggattgaaacatt 877
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1543 tgcaaaagtcttacaaatgaaacattctgaaaaaccaatgtattttgggattgaaacatt 1602


Query: 878  tatcaatggtgaatatcaaaaatacaatagtaattgtggttggttaaaagatgatgcaat 937
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1603 tatcaatggtgaatatcaaaaatacaatagtaattgtggttggttaaaagatgatgcaat 1662


Query: 938  gtctgaaatacttcaaacattctctcattggacatatcaagaatc 982
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1663 gtctgaaatacttcaaacattctctcattggacatatcaagaatc 1707

 Score =  406 bits (205), Expect(4) = 0.0
 Identities = 205/205 (100%)
 Strand = Plus / Plus


Query: 1048 tgatccagcaattcattccactgatacattaagatttggaagttgtaaccttggtaaacc 1107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1771 tgatccagcaattcattccactgatacattaagatttggaagttgtaaccttggtaaacc 1830


Query: 1108 tggtataattaaattctttcaatcacataaatgtaatcaacattgtaaaaaattaggttt 1167
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1831 tggtataattaaattctttcaatcacataaatgtaatcaacattgtaaaaaattaggttt 1890


Query: 1168 aaccattccatcttttacttcttcatcctccacatcatcttcctcccgttccacatcatc 1227
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1891 aaccattccatcttttacttcttcatcctccacatcatcttcctcccgttccacatcatc 1950


Query: 1228 ttcctcttctatttcatattcttat 1252
            |||||||||||||||||||||||||
Sbjct: 1951 ttcctcttctatttcatattcttat 1975

 Score =  113 bits (57), Expect(4) = 0.0
 Identities = 57/57 (100%)
 Strand = Plus / Plus


Query: 990  taaagcaattgtagtcgatattcaaggtgtcaaaacctcaaaaggttatttattaac 1046
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1714 taaagcaattgtagtcgatattcaaggtgtcaaaacctcaaaaggttatttattaac 1770

 Score = 56.0 bits (28), Expect(4) = 0.0
 Identities = 28/28 (100%)
 Strand = Plus / Plus


Query: 1252 taataaacaaataaaaaactatcacaat 1279
            ||||||||||||||||||||||||||||
Sbjct: 1976 taataaacaaataaaaaactatcacaat 2003

 Score =  565 bits (285), Expect(3) = 0.0
 Identities = 288/289 (99%)
 Strand = Plus / Plus


Query: 339 taacatttaaagcaattagagcatcggagtgtgttgatttattatttattgttgattgta 398
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 taacatttaaagcaattagagcatcggagtgtgttgatttattatttattgttgattgta 488


Query: 399 ctggttcaatggatccatatattgaacaaataaagagtgatattgtaaaattacaagaag 458
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ctggttcaatggatccatatattgaacaaataaagagtgatattgtaaaattacaagaag 548


Query: 459 cattaaaattaaaacattcatttttagatattgaatttggttttattcgttatactgatt 518
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 cattaaaattaaaacattcatttttagatattgaatttggttttattcgttatactgatt 608


Query: 519 tcgatgtagcatcaaacagatgttcaacttttcaattctctcgttccactgtagaatttg 578
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tcgatgtagcatcaaacagatgttcaacttttcaattctctcgttccactgtagaatttg 668


Query: 579 ttagatttgtttctgaaattggagcaggtggtggtgctgatggtcctga 627
           |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 669 ttagatttgtttctgaaattagagcaggtggtggtgctgatggtcctga 717

 Score =  464 bits (234), Expect(3) = 0.0
 Identities = 234/234 (100%)
 Strand = Plus / Plus


Query: 58  gccatccggaagagttaatgtttcagatatggattcaatttcaaattcattatcaaaaac 117
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gccatccggaagagttaatgtttcagatatggattcaatttcaaattcattatcaaaaac 207


Query: 118 ttcacttggaacaagaaaagtgccaacatcattaaaaactgatgcatcaagaagtggttt 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttcacttggaacaagaaaagtgccaacatcattaaaaactgatgcatcaagaagtggttt 267


Query: 178 aagttcaggtggtagtaaaacacatatatcagatgaaagtgcattaagaatggtttatgg 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aagttcaggtggtagtaaaacacatatatcagatgaaagtgcattaagaatggtttatgg 327


Query: 238 tagtaccccaagagatgaaaaaacaactactacaaaagattcaataacacttgc 291
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tagtaccccaagagatgaaaaaacaactactacaaaagattcaataacacttgc 381

 Score = 34.2 bits (17), Expect(3) = 0.0
 Identities = 17/17 (100%)
 Strand = Plus / Plus


Query: 1196 tccacatcatcttcctc 1212
            |||||||||||||||||
Sbjct: 1940 tccacatcatcttcctc 1956

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,665,829,533
Number of extensions: 104753657
Number of successful extensions: 9283253
Number of sequences better than 10.0: 202
Length of query: 1286
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 1262
Effective length of database: 99,340,224,878
Effective search space: 125367363796036
Effective search space used: 125367363796036
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.10
Homology vs Protein 
Query= Contig-U00222-1 (Contig-U00222-1Q) /CSM_Contig/Contig-U00222-1Q.Seq.d
         (1286 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54DK4) RecName: Full=Alpha-protein kinase 1;          Short=AK...    56   2e-14
BC076410_1(BC076410|pid:none) Danio rerio elongation factor-2 ki...    54   2e-13
A55532(A55532) myosin-heavy-chain kinase (EC 2.7.1.129) A - slim...    52   5e-13
FN318977_1(FN318977|pid:none) Schistosoma japonicum isolate Anhu...    49   5e-13
(P70531) RecName: Full=Elongation factor 2 kinase;          EC=2...    55   5e-13
BC061825_1(BC061825|pid:none) Rattus norvegicus eukaryotic elong...    55   5e-13
BC055361_1(BC055361|pid:none) Mus musculus eukaryotic elongation...    53   7e-13
(O08796) RecName: Full=Elongation factor 2 kinase;          EC=2...    53   7e-13
AK080915_1(AK080915|pid:none) Mus musculus 4 days neonate male a...    53   7e-13
AK136015_1(AK136015|pid:none) Mus musculus in vitro fertilized e...    53   7e-13
FN318979_1(FN318979|pid:none) Schistosoma japonicum isolate Anhu...    50   2e-12
BC032665_1(BC032665|pid:none) Homo sapiens eukaryotic elongation...    54   2e-12
CT005264_69(CT005264|pid:none) Leishmania major strain Friedlin,...    49   3e-12
AM502243_69(AM502243|pid:none) Leishmania infantum chromosome 25.      50   3e-12
(Q8MY12) RecName: Full=Myosin heavy chain kinase C;          Sho...    52   9e-12
AF079447_1(AF079447|pid:none) Dictyostelium discoideum myosin he...    52   9e-12
FN357421_10(FN357421|pid:none) Schistosoma mansoni genome sequen...    46   8e-09
U10414_6(U10414|pid:none) Caenorhabditis elegans cosmid F42A10, ...    42   4e-08
AM494972_480(AM494972|pid:none) Leishmania braziliensis chromoso...    42   3e-06
CT005272_486(CT005272|pid:none) Leishmania major strain Friedlin...    43   3e-06
AX496864_1(AX496864|pid:none) Sequence 1 from Patent WO0210391. ...    42   4e-06
AB262769_1(AB262769|pid:none) Ovis aries TRPM7 mRNA for transien...    42   4e-06
(Q96QT4) RecName: Full=Transient receptor potential cation chann...    42   4e-06
EF467373_1(EF467373|pid:none) Ovis aries transient receptor pote...    42   4e-06
AF376052_1(AF376052|pid:none) Mus musculus transient receptor po...    42   4e-06
(Q925B3) RecName: Full=Transient receptor potential cation chann...    42   4e-06
(Q923J1) RecName: Full=Transient receptor potential cation chann...    42   4e-06
AK172800_1(AK172800|pid:none) Homo sapiens cDNA FLJ23961 fis, cl...    42   4e-06
AK029000_1(AK029000|pid:none) Mus musculus 10 days neonate skin ...    42   4e-06
BC169235_1(BC169235|pid:none) Synthetic construct Homo sapiens c...    42   4e-06
AK075193_1(AK075193|pid:none) Homo sapiens cDNA FLJ90712 fis, cl...    42   6e-06
AM502254_517(AM502254|pid:none) Leishmania infantum chromosome 36.     44   7e-06
(Q9BX84) RecName: Full=Transient receptor potential cation chann...    39   9e-06
AY333283_1(AY333283|pid:none) Homo sapiens transient receptor po...    39   9e-06
AK000094_1(AK000094|pid:none) Homo sapiens cDNA FLJ20087 fis, cl...    39   9e-06
(Q8CIR4) RecName: Full=Transient receptor potential cation chann...    39   3e-05
CP001160_413(CP001160|pid:none) Thalassiosira pseudonana CCMP133...    40   4e-05
AM502254_515(AM502254|pid:none) Leishmania infantum chromosome 36.     39   6e-05
BC163719_1(BC163719|pid:none) Danio rerio transient receptor pot...    38   2e-04
AY860421_1(AY860421|pid:none) Danio rerio transient receptor pot...    38   2e-04
AM494962_51(AM494962|pid:none) Leishmania braziliensis chromosom...    46   0.003
CU633438_547(CU633438|pid:none) Podospora anserina genomic DNA c...    35   0.006
AL732330_7(AL732330|pid:none) Mouse DNA sequence from clone RP23...    42   0.037
AC079815_14(AC079815|pid:none) Trypanosoma brucei chromosome 4 c...    42   0.063
AB040960_1(AB040960|pid:none) Homo sapiens mRNA for KIAA1527 pro...    41   0.11
AY044164_1(AY044164|pid:none) Homo sapiens lymphocyte alpha-kina...    41   0.11
AE017356_24(AE017356|pid:none) Cryptococcus neoformans var. neof...    41   0.11
AB075877_1(AB075877|pid:none) Homo sapiens LAK mRNA for lymphocy...    41   0.11
AK304708_1(AK304708|pid:none) Homo sapiens cDNA FLJ55444 complet...    41   0.11
AM494972_478(AM494972|pid:none) Leishmania braziliensis chromoso...    39   0.31
AK173191_1(AK173191|pid:none) Mus musculus mRNA for mKIAA1527 pr...    39   0.41
AC117176_32(AC117176|pid:none) Dictyostelium discoideum chromoso...    39   0.53
CT005272_470(CT005272|pid:none) Leishmania major strain Friedlin...    36   0.91
(Q6G620) RecName: Full=Serine-rich adhesin for platelets; AltNam...    37   1.5
CP000716_1464(CP000716|pid:none) Thermosipho melanesiensis BI429...    37   1.5
AP007170_39(AP007170|pid:none) Aspergillus oryzae RIB40 genomic ...    37   1.5
CP000283_133(CP000283|pid:none) Rhodopseudomonas palustris BisB5...    37   1.5
(Q8NUJ3) RecName: Full=Serine-rich adhesin for platelets; AltNam...    37   1.5
CP001634_1377(CP001634|pid:none) Kosmotoga olearia TBF 19.5.1, c...    37   2.0
AE016817_600(AE016817|pid:none) Ashbya gossypii (= Eremothecium ...    37   2.0
CP001393_2029(CP001393|pid:none) Anaerocellum thermophilum DSM 6...    36   3.4
FN318978_1(FN318978|pid:none) Schistosoma japonicum isolate Anhu...    36   3.4
CP000568_3076(CP000568|pid:none) Clostridium thermocellum ATCC 2...    36   3.4
AE016853_2816(AE016853|pid:none) Pseudomonas syringae pv. tomato...    35   4.5
(Q6GDE9) RecName: Full=Serine-rich adhesin for platelets; AltNam...    35   4.5
AE014297_1518(AE014297|pid:none) Drosophila melanogaster chromos...    35   4.5
CP000422_59(CP000422|pid:none) Pediococcus pentosaceus ATCC 2574...    35   4.5
CP001357_1117(CP001357|pid:none) Brachyspira hyodysenteriae WA1,...    35   5.9
BC129022_1(BC129022|pid:none) Xenopus tropicalis hypothetical pr...    35   5.9
AE009948_1638(AE009948|pid:none) Streptococcus agalactiae 2603V/...    35   5.9
(Q91ZB0) RecName: Full=Alpha-protein kinase 2;          EC=2.7.1...    27   6.6
AY044451_1(AY044451|pid:none) Mus musculus heart alpha-kinase mR...    27   6.7
CP001189_3147(CP001189|pid:none) Gluconacetobacter diazotrophicu...    35   7.7

>(Q54DK4) RecName: Full=Alpha-protein kinase 1;          Short=AK1;
                  EC=2.7.11.-;
          Length = 1352

 Score = 55.8 bits (133), Expect(2) = 2e-14
 Identities = 31/90 (34%), Positives = 52/90 (57%)
 Frame = +3

Query: 714  YFESMECQTVAAKFALEFNKQLSLTSSEHQITFTVAKVLQMKHSEKPMYFGIETFINGEY 893
            YF+ +E QT + + A  FN    L S   +I F  A V+++   +   +  +E FI G+Y
Sbjct: 1050 YFKDVEMQTYSKEIAERFN----LKSPPKKIDFVPAFVMELVERQGKPFCAVEYFIEGKY 1105

Query: 894  QKYNSNCGWLKDDAMSEILQTFSHWTYQES 983
            +K+N+N G+ K+D      Q FSH++Y++S
Sbjct: 1106 EKHNNNFGY-KNDYDRNTPQAFSHFSYEDS 1134

 Score = 47.8 bits (112), Expect(2) = 2e-14
 Identities = 22/41 (53%), Positives = 26/41 (63%)
 Frame = +2

Query: 1049 DPAIHSTDTLRFGSCNLGKPGIIKFFQSHKCNQHCKKLGLT 1171
            DP IHS D   FG  NLG  GI +FF +H+CN  C  LGL+
Sbjct: 1152 DPQIHSADGQGFGKGNLGIEGIKRFFSTHQCNPICHYLGLS 1192

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,662,298,058
Number of extensions: 28480321
Number of successful extensions: 68314
Number of sequences better than 10.0: 73
Number of HSP's gapped: 68227
Number of HSP's successfully gapped: 122
Length of query: 428
Length of database: 1,051,180,864
Length adjustment: 131
Effective length of query: 297
Effective length of database: 627,191,635
Effective search space: 186275915595
Effective search space used: 186275915595
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.42  gvh: 0.38  alm: 0.42  top: 0.53  tms: 0.00  mit: 0.23  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 60.0 %: cytoplasmic
	 20.0 %: nuclear
	 12.0 %: mitochondrial
	  4.0 %: cytoskeletal
	  4.0 %: peroxisomal

>> prediction for Contig-U00222-1 is cyt
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 2
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0