>Contig-U06251-1 (Contig-U06251-1Q) /CSM_Contig/Contig-U06251-1Q.Seq.d
CACACGTCAATAATTTCATCTTATTATTCACTCTCACAAAAATAAAAAAA
AATACATAAAAATGGATATTAATGAAAATAGTAAAGAATTTTTTGGATCA
TGCCATTGTGGTAATGTTAGATTTCAATGTAAACTTGAAACTGAATTATT
AAAATCAGAAACTTTAAGATGTAATTGTTCATATTGTTTAAAAACTAGAT
TTTGGGAAATTATTGTTTGCCCTAAAGATTTCAAAGTATTAAAAGGTGAA
AATGATCAAGAAAATTACCTATATGGTTCAAAGATAAATGATAACTATTT
TTGCAAAGCCTGTGGTGTTAATACATATACTCTTGTCAAAATGGAAGGTG
TTCCAAATGCTCCATTTTATGCTGTTAACGTTAATACAATCGAAGGCATT
ACTCATGAACAACTTTCAAAATTAAAGGTTACATTTTTAGATGGTGCAAC
TGATAATTGGCAAAATGAACCAATATATCATAATCATATTTAAAATATTG
ATGGTTACCTAAATTTGTGTCTTTTTTTTTTTTTAAATTAGAATTTAAAA
ATTAATAAAAATATAAAATAGTTGTTTTAAATAATTTTTGATTCAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAA

est1=VSJ721F,1,517
est2=VSJ721Z,12,442
est3=VSE424Z,60,582
est4=VSA429Z,183,664

trq*FHLIIHSHKNKKKYIKMDINENSKEFFGSCHCGNVRFQCKLETELLKSETLRCNCS
YCLKTRFWEIIVCPKDFKVLKGENDQENYLYGSKINDNYFCKACGVNTYTLVKMEGVPNA
PFYAVNVNTIEGITHEQLSKLKVTFLDGATDNWQNEPIYHNHI*nidgylnlclfffln*
nlkinknik*lf*iifdskkkkkkkkkkkkkkkkkkkkkk

Frame A:
htsiissyyslsqk*kkihkngy**k**rifwimplw*c*ism*t*n*iikirnfkm*lf
ilfkn*ilgnyclp*rfqsikr*k*srklpiwfkdk**lflqslwc*yiyscqngrcskc
silcc*r*ynrrhys*ttfkikgyifrwcn**lak*tnis*sylky*wlpkfvsffffkl
efkn**kykivvlnnf*fkkkkkkkkkkkkkkkkkkkkkkk


Frame B:
trq*FHLIIHSHKNKKKYIKMDINENSKEFFGSCHCGNVRFQCKLETELLKSETLRCNCS
YCLKTRFWEIIVCPKDFKVLKGENDQENYLYGSKINDNYFCKACGVNTYTLVKMEGVPNA
PFYAVNVNTIEGITHEQLSKLKVTFLDGATDNWQNEPIYHNHI*nidgylnlclfffln*
nlkinknik*lf*iifdskkkkkkkkkkkkkkkkkkkkkk


Frame C:
hvnnfillftltkikknt*kwilmkivknfldhaivvmldfnvnlklny*nqkl*dvivh
iv*kldfgkllfalkisky*kvkmikkitymvqr*mitifakpvvlihillskwkvfqml
hfmlltliqskallmnnfqn*rlhf*mvqliigkmnqyiiiifkilmvt*icvffff*ir
i*kliki*nscfk*fliqkkkkkkkkkkkkkkkkkkkkkk

Query= Contig-U06251-1 (Contig-U06251-1Q)
/CSM_Contig/Contig-U06251-1Q.Seq.d
         (663 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U06251-1 (Contig-U06251-1Q) /CSM_Contig/Conti...   930  0.0
Contig-U12512-1 (Contig-U12512-1Q) /CSM_Contig/Conti...    38  0.012
Contig-U07860-1 (Contig-U07860-1Q) /CSM_Contig/Conti...    38  0.012
Contig-U14335-1 (Contig-U14335-1Q) /CSM_Contig/Conti...    34  0.18
Contig-U14239-1 (Contig-U14239-1Q) /CSM_Contig/Conti...    34  0.18
Contig-U11312-1 (Contig-U11312-1Q) /CSM_Contig/Conti...    34  0.18
Contig-U11260-1 (Contig-U11260-1Q) /CSM_Contig/Conti...    34  0.18
Contig-U07063-1 (Contig-U07063-1Q) /CSM_Contig/Conti...    34  0.18
Contig-U06050-1 (Contig-U06050-1Q) /CSM_Contig/Conti...    34  0.18
Contig-U05133-1 (Contig-U05133-1Q) /CSM_Contig/Conti...    34  0.18

>Contig-U06251-1 (Contig-U06251-1Q) /CSM_Contig/Contig-U06251-1Q.Seq.d
          Length = 663

 Score =  930 bits (469), Expect = 0.0
 Identities = 469/469 (100%)
 Strand = Plus / Plus

                                                                       
Query: 53  tacataaaaatggatattaatgaaaatagtaaagaattttttggatcatgccattgtggt 112
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53  tacataaaaatggatattaatgaaaatagtaaagaattttttggatcatgccattgtggt 112

                                                                       
Query: 113 aatgttagatttcaatgtaaacttgaaactgaattattaaaatcagaaactttaagatgt 172
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 aatgttagatttcaatgtaaacttgaaactgaattattaaaatcagaaactttaagatgt 172

                                                                       
Query: 173 aattgttcatattgtttaaaaactagattttgggaaattattgtttgccctaaagatttc 232
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 aattgttcatattgtttaaaaactagattttgggaaattattgtttgccctaaagatttc 232

                                                                       
Query: 233 aaagtattaaaaggtgaaaatgatcaagaaaattacctatatggttcaaagataaatgat 292
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 aaagtattaaaaggtgaaaatgatcaagaaaattacctatatggttcaaagataaatgat 292

                                                                       
Query: 293 aactatttttgcaaagcctgtggtgttaatacatatactcttgtcaaaatggaaggtgtt 352
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aactatttttgcaaagcctgtggtgttaatacatatactcttgtcaaaatggaaggtgtt 352

                                                                       
Query: 353 ccaaatgctccattttatgctgttaacgttaatacaatcgaaggcattactcatgaacaa 412
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ccaaatgctccattttatgctgttaacgttaatacaatcgaaggcattactcatgaacaa 412

                                                                       
Query: 413 ctttcaaaattaaaggttacatttttagatggtgcaactgataattggcaaaatgaacca 472
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ctttcaaaattaaaggttacatttttagatggtgcaactgataattggcaaaatgaacca 472

                                                            
Query: 473 atatatcataatcatatttaaaatattgatggttacctaaatttgtgtc 521
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 atatatcataatcatatttaaaatattgatggttacctaaatttgtgtc 521


 Score = 73.8 bits (37), Expect = 2e-13
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                               
Query: 1  cacacgtcaataatttcatcttattattcactctcac 37
          |||||||||||||||||||||||||||||||||||||
Sbjct: 1  cacacgtcaataatttcatcttattattcactctcac 37


>Contig-U12512-1 (Contig-U12512-1Q) /CSM_Contig/Contig-U12512-1Q.Seq.d
          Length = 1972

 Score = 38.2 bits (19), Expect = 0.012
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 75   aaaatagtaaagaattttt 93
            |||||||||||||||||||
Sbjct: 1122 aaaatagtaaagaattttt 1140


>Contig-U07860-1 (Contig-U07860-1Q) /CSM_Contig/Contig-U07860-1Q.Seq.d
          Length = 954

 Score = 38.2 bits (19), Expect = 0.012
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 406 tgaacaactttcaaaatta 424
           |||||||||||||||||||
Sbjct: 657 tgaacaactttcaaaatta 675


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7757
Number of Sequences: 6905
Number of extensions: 7757
Number of successful extensions: 825
Number of sequences better than 10.0: 86
length of query: 663
length of database: 5,674,871
effective HSP length: 16
effective length of query: 647
effective length of database: 5,564,391
effective search space: 3600160977
effective search space used: 3600160977
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U06251-1 (Contig-U06251-1Q) /CSM_Contig/Contig-U06251-1Q.Seq.d
         (663 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU270365) Dictyostelium discoideum vegetative cDNA clone:VS...   902   0.0    2
(AU263092) Dictyostelium discoideum vegetative cDNA clone:VS...   910   0.0    1
(AU261471) Dictyostelium discoideum vegetative cDNA clone:VS...   656   0.0    1
(AU270366) Dictyostelium discoideum vegetative cDNA clone:VS...   611   e-176  2
(BJ348941) Dictyostelium discoideum cDNA clone:dda34i23, 3' ...    62   3e-05  1
(AC009991) Arabidopsis thaliana chromosome III BAC F9F8 geno...    50   0.11   1
(CL501468) SAIL_699_A05.v1 SAIL Collection Arabidopsis thali...    50   0.11   1
(AC175860) Strongylocentrotus purpuratus clone R3-15H18, WOR...    38   0.39   5
(BG602146) EST501236 Plasmodium yoelii sporozoite cDNA Plasm...    48   0.42   1
(BG602144) EST501234 Plasmodium yoelii sporozoite cDNA Plasm...    48   0.42   1
(BG602143) EST501233 Plasmodium yoelii sporozoite cDNA Plasm...    48   0.42   1
(U39995) Caenorhabditis elegans cosmid M60, complete sequence.     36   1.4    4
(AC152660) Bos taurus clone CH240-12G12, WORKING DRAFT SEQUE...    42   1.5    4
(AF024501) Caenorhabditis elegans cosmid F39E9, complete seq...    46   1.7    1
(ET631677) lbuc_c_152 Leptotrichia buccalis ATCC 14201 genom...    46   1.7    1
(ET223036) 6BA1 Brachiola algerae pCR4Blunt-TOPO library Bra...    46   1.7    1
(AL451130) Human DNA sequence from clone RP11-10G21 on chrom...    34   2.2    4
(AC216151) Myotis lucifugus clone CH235-289P5, WORKING DRAFT...    34   3.2    2
(AC199650) Myotis lucifugus clone CH235-58F22, WORKING DRAFT...    34   3.4    2
(AC069333) Homo sapiens BAC clone RP11-634D21 from 2, comple...    42   5.1    4
(CU855671) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    36   6.1    7
(BV225276) S233P6194RC12.T0 LabradorRetriever Canis familiar...    44   6.6    1
(AC144939) Mus musculus BAC clone RP24-137O21 from chromosom...    44   6.6    1
(AC122839) Mus musculus BAC clone RP23-193K9 from 8, complet...    44   6.6    1
(AP010336) Lotus japonicus genomic DNA, chromosome 2, clone:...    44   6.6    1
(AC027119) Homo sapiens chromosome 3 clone RP11-113L10 map 3...    44   6.6    1
(AC137295) Rattus norvegicus clone CH230-unknown, *** SEQUEN...    44   6.6    1
(AC112029) Rattus norvegicus clone CH230-102B10, *** SEQUENC...    44   6.6    1
(AC111864) Rattus norvegicus clone CH230-214O3, *** SEQUENCI...    44   6.6    1
(AC111825) Rattus norvegicus clone CH230-272C3, *** SEQUENCI...    44   6.6    1
(AC055760) Homo sapiens chromosome 3 clone RP11-99D10, WORKI...    44   6.6    1
(AP010178) Lotus japonicus genomic DNA, chromosome 2, clone:...    44   6.6    1
(AC170562) Bos taurus clone CH240-241D19, WORKING DRAFT SEQU...    44   6.6    1
(DX558358) GH_MBb0031J13r GH_MBb Gossypium hirsutum genomic ...    44   6.6    1
(DU916693) 324167 Tomato EcoRI BAC Library Solanum lycopersi...    44   6.6    1
(DU887267) 394646 Tomato HindIII BAC Library Solanum lycoper...    44   6.6    1
(DE525569) Bombyx mori genomic DNA, Fosmid clone:GBMFno146_m...    44   6.6    1
(DE191960) Branchiostoma floridae DNA, clone: CH302-072_C12_...    44   6.6    1
(DE153977) Bombyx mori genomic DNA, Fosmid clone:RO0296-B19_R.     44   6.6    1
(CL045077) CH216-62E8_Sp6.1 CH216 Xenopus (Silurana) tropica...    44   6.6    1
(AG236311) Lotus japonicus DNA, clone:LjB69l11_f.                  44   6.6    1
(EV102203) 0094526 Brassica napus Leaf library Brassica napu...    44   6.6    1
(EV102125) 0094448 Brassica napus Leaf library Brassica napu...    44   6.6    1
(EE503164) EX2PLCL3_UP_004_H11_10APR2003_041 Brassica napus ...    44   6.6    1
(EE502468) EX2PLCL1_UP_003_F10_10APR2003_035 Brassica napus ...    44   6.6    1
(DC845329) Brassica rapa subsp. pekinensis mRNA, clone: BRes...    44   6.6    1
(BE738049) 601572638F1 NIH_MGC_57 Homo sapiens cDNA clone IM...    44   6.6    1
(EX142402) BR126232 primary leaf cDNA library KLPS Brassica ...    44   6.6    1
(EX142392) BR126222 primary leaf cDNA library KLPS Brassica ...    44   6.6    1
(EX142175) BR126005 primary leaf cDNA library KLPS Brassica ...    44   6.6    1
(EX142050) BR125880 primary leaf cDNA library KLPS Brassica ...    44   6.6    1
(EX141040) BR124870 primary leaf cDNA library KLPS Brassica ...    44   6.6    1
(EX140673) BR124503 primary leaf cDNA library KLPS Brassica ...    44   6.6    1
(EX130028) BR113858 ovule and silique cDNA library KHOS Bras...    44   6.6    1
(EX129397) BR113227 ovule and silique cDNA library KHOS Bras...    44   6.6    1
(EX128759) BR112589 ovule and silique cDNA library KHOS Bras...    44   6.6    1
(EX128541) BR112371 ovule and silique cDNA library KHOS Bras...    44   6.6    1
(EX125160) BR108990 mature green leaf cDNA library KHLM Bras...    44   6.6    1
(EX125065) BR108895 mature green leaf cDNA library KHLM Bras...    44   6.6    1
(EX124775) BR108605 mature green leaf cDNA library KHLM Bras...    44   6.6    1
(EX124282) BR108112 mature green leaf cDNA library KHLM Bras...    44   6.6    1
(EX124178) BR108008 mature green leaf cDNA library KHLM Bras...    44   6.6    1
(EX124044) BR107874 mature green leaf cDNA library KHLM Bras...    44   6.6    1
(EX123868) BR107698 mature green leaf cDNA library KHLM Bras...    44   6.6    1
(EX123655) BR107485 mature green leaf cDNA library KHLM Bras...    44   6.6    1
(EX123632) BR107462 mature green leaf cDNA library KHLM Bras...    44   6.6    1
(EX123448) BR107278 mature green leaf cDNA library KHLM Bras...    44   6.6    1
(EX123063) BR106893 mature green leaf cDNA library KHLM Bras...    44   6.6    1
(EX122892) BR106722 mature green leaf cDNA library KHLM Bras...    44   6.6    1
(EX122340) BR106170 mature green leaf cDNA library KHLM Bras...    44   6.6    1
(EX121891) BR105721 defected leaf cDNA library KHLD Brassica...    44   6.6    1
(EX121652) BR105482 defected leaf cDNA library KHLD Brassica...    44   6.6    1
(EX121456) BR105286 defected leaf cDNA library KHLD Brassica...    44   6.6    1
(EX121410) BR105240 defected leaf cDNA library KHLD Brassica...    44   6.6    1
(EX121176) BR105006 defected leaf cDNA library KHLD Brassica...    44   6.6    1
(EX120870) BR104700 defected leaf cDNA library KHLD Brassica...    44   6.6    1
(EX120698) BR104528 defected leaf cDNA library KHLD Brassica...    44   6.6    1
(EX119924) BR103754 cotyledon cDNA library KHCT Brassica rap...    44   6.6    1
(EX119206) BR103036 cotyledon cDNA library KHCT Brassica rap...    44   6.6    1
(EX109174) BR095464 whole plant cDNA library KFYP Brassica r...    44   6.6    1
(EX107217) BR093507 whole plant cDNA library KFYP Brassica r...    44   6.6    1
(EX085939) BR072229 flower cDNA library KFFB Brassica rapa s...    44   6.6    1
(EX079442) BR064086 silique cDNA library KBSP Brassica rapa ...    44   6.6    1
(EX077361) BR062005 silique cDNA library KBSP Brassica rapa ...    44   6.6    1
(EX071893) BR056538 seedling cDNA library KBPS Brassica rapa...    44   6.6    1
(EX060168) BR044812 salt-treated whole plant cDNA library KB...    44   6.6    1
(EX058546) BR043190 salt-treated whole plant cDNA library KB...    44   6.6    1
(EX053148) BR037792 floral buds cDNA library KBFS Brassica r...    44   6.6    1
(EX051492) BR036136 floral buds cDNA library KBFS Brassica r...    44   6.6    1
(EX050632) BR035276 floral buds cDNA library KBFS Brassica r...    44   6.6    1
(EX049827) BR034471 floral buds cDNA library KBFS Brassica r...    44   6.6    1
(EX049499) BR034143 floral buds cDNA library KBFS Brassica r...    44   6.6    1
(EX048554) BR033198 floral buds cDNA library KBFS Brassica r...    44   6.6    1
(EX048545) BR033189 floral buds cDNA library KBFS Brassica r...    44   6.6    1
(EX046896) BR031540 floral buds cDNA library KBFS Brassica r...    44   6.6    1
(EX046652) BR031296 floral buds cDNA library KBFS Brassica r...    44   6.6    1
(EX018815) BR003459 light-chilled whole plant cDNA library K...    44   6.6    1
(EV223542) 0105468 Brassica napus Damaged cotyledons Brassic...    44   6.6    1
(EV214501) 0186322 Brassica napus Leaf - drought Brassica na...    44   6.6    1
(EV214337) 0186158 Brassica napus Leaf - drought Brassica na...    44   6.6    1

>(AU270365) Dictyostelium discoideum vegetative cDNA clone:VSJ721,
           5' end single read.
          Length = 517

 Score =  902 bits (455), Expect(2) = 0.0
 Identities = 455/455 (100%)
 Strand = Plus / Plus


Query: 63  tggatattaatgaaaatagtaaagaattttttggatcatgccattgtggtaatgttagat 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  tggatattaatgaaaatagtaaagaattttttggatcatgccattgtggtaatgttagat 122


Query: 123 ttcaatgtaaacttgaaactgaattattaaaatcagaaactttaagatgtaattgttcat 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ttcaatgtaaacttgaaactgaattattaaaatcagaaactttaagatgtaattgttcat 182


Query: 183 attgtttaaaaactagattttgggaaattattgtttgccctaaagatttcaaagtattaa 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 attgtttaaaaactagattttgggaaattattgtttgccctaaagatttcaaagtattaa 242


Query: 243 aaggtgaaaatgatcaagaaaattacctatatggttcaaagataaatgataactattttt 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aaggtgaaaatgatcaagaaaattacctatatggttcaaagataaatgataactattttt 302


Query: 303 gcaaagcctgtggtgttaatacatatactcttgtcaaaatggaaggtgttccaaatgctc 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gcaaagcctgtggtgttaatacatatactcttgtcaaaatggaaggtgttccaaatgctc 362


Query: 363 cattttatgctgttaacgttaatacaatcgaaggcattactcatgaacaactttcaaaat 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 cattttatgctgttaacgttaatacaatcgaaggcattactcatgaacaactttcaaaat 422


Query: 423 taaaggttacatttttagatggtgcaactgataattggcaaaatgaaccaatatatcata 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 taaaggttacatttttagatggtgcaactgataattggcaaaatgaaccaatatatcata 482


Query: 483 atcatatttaaaatattgatggttacctaaatttg 517
           |||||||||||||||||||||||||||||||||||
Sbjct: 483 atcatatttaaaatattgatggttacctaaatttg 517

 Score = 73.8 bits (37), Expect(2) = 0.0
 Identities = 37/37 (100%)
 Strand = Plus / Plus


Query: 1  cacacgtcaataatttcatcttattattcactctcac 37
          |||||||||||||||||||||||||||||||||||||
Sbjct: 1  cacacgtcaataatttcatcttattattcactctcac 37

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 668,898,109
Number of extensions: 40944895
Number of successful extensions: 3408009
Number of sequences better than 10.0: 126
Length of query: 663
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 639
Effective length of database: 97,308,875,965
Effective search space: 62180371741635
Effective search space used: 62180371741635
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U06251-1 (Contig-U06251-1Q) /CSM_Contig/Contig-U06251-1Q.Seq.d
         (663 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL591985_1530(AL591985|pid:none) Sinorhizobium meliloti 1021 pla...   102   1e-20
AE010300_343(AE010300|pid:none) Leptospira interrogans serovar l...    97   4e-19
AE016823_285(AE016823|pid:none) Leptospira interrogans serovar C...    96   9e-19
AL591688_2838(AL591688|pid:none) Sinorhizobium meliloti 1021 com...    96   1e-18
AM236080_603(AM236080|pid:none) Rhizobium leguminosarum bv. vici...    92   1e-17
CP001191_216(CP001191|pid:none) Rhizobium leguminosarum bv. trif...    92   2e-17
CP001389_2823(CP001389|pid:none) Rhizobium sp. NGR234, complete ...    91   2e-17
CP000133_550(CP000133|pid:none) Rhizobium etli CFN 42, complete ...    90   5e-17
CP001074_623(CP001074|pid:none) Rhizobium etli CIAT 652, complet...    89   1e-16
CP000356_2350(CP000356|pid:none) Sphingopyxis alaskensis RB2256,...    85   2e-15
AM778880_19(AM778880|pid:none) Microcystis aeruginosa PCC 7806 g...    69   9e-11
CP001096_4335(CP001096|pid:none) Rhodopseudomonas palustris TIE-...    69   1e-10
CP000806_450(CP000806|pid:none) Cyanothece sp. ATCC 51142 circul...    69   2e-10
BX572605_171(BX572605|pid:none) Rhodopseudomonas palustris CGA00...    68   3e-10
AM746676_5229(AM746676|pid:none) Sorangium cellulosum 'So ce 56'...    68   3e-10
CP000283_1700(CP000283|pid:none) Rhodopseudomonas palustris BisB...    67   5e-10
CP001287_3647(CP001287|pid:none) Cyanothece sp. PCC 8801, comple...    67   6e-10
CP000769_1535(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c...    67   6e-10
CP001291_1410(CP001291|pid:none) Cyanothece sp. PCC 7424, comple...    64   5e-09
CP001344_218(CP001344|pid:none) Cyanothece sp. PCC 7425, complet...    63   9e-09
BC123137_1(BC123137|pid:none) Xenopus laevis nuclear protein p30...    61   3e-08
CP000489_732(CP000489|pid:none) Paracoccus denitrificans PD1222 ...    61   3e-08
BC135143_1(BC135143|pid:none) Xenopus tropicalis hypothetical pr...    61   3e-08
CP000075_127(CP000075|pid:none) Pseudomonas syringae pv. syringa...    59   1e-07
CP000282_3346(CP000282|pid:none) Saccharophagus degradans 2-40, ...    59   1e-07
CP001068_3453(CP001068|pid:none) Ralstonia pickettii 12J chromos...    59   1e-07
CP000264_1500(CP000264|pid:none) Jannaschia sp. CCS1, complete g...    58   2e-07
AB2872(AB2872) conserved hypothetical protein Atu2404 [imported]...    58   2e-07
AL953908_4(AL953908|pid:none) Zebrafish DNA sequence from clone ...    58   3e-07
DQ088852_4(DQ088852|pid:none) Uncultured bacterium eBACmed86H08 ...    58   3e-07
CP000390_3037(CP000390|pid:none) Mesorhizobium sp. BNC1, complet...    58   3e-07
CP000489_2228(CP000489|pid:none) Paracoccus denitrificans PD1222...    57   5e-07
CU468230_2751(CU468230|pid:none) Acinetobacter baumannii str. SD...    57   5e-07
AP009385_1663(AP009385|pid:none) Burkholderia multivorans ATCC 1...    57   6e-07
BX572599_44(BX572599|pid:none) Rhodopseudomonas palustris CGA009...    57   6e-07
CP000269_3502(CP000269|pid:none) Janthinobacterium sp. Marseille...    56   8e-07
CP001053_600(CP001053|pid:none) Burkholderia phytofirmans PsJN c...    56   8e-07
CP000758_868(CP000758|pid:none) Ochrobactrum anthropi ATCC 49188...    56   8e-07
CP001001_1971(CP001001|pid:none) Methylobacterium radiotolerans ...    56   1e-06
CP001131_3345(CP001131|pid:none) Anaeromyxobacter sp. K, complet...    56   1e-06
AE014291_1978(AE014291|pid:none) Brucella suis 1330 chromosome I...    55   1e-06
AE017223_1894(AE017223|pid:none) Brucella abortus biovar 1 str. ...    55   1e-06
CP000708_1801(CP000708|pid:none) Brucella ovis ATCC 25840 chromo...    55   1e-06
CP000143_751(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 ch...    55   1e-06
AK014046_1(AK014046|pid:none) Mus musculus 13 days embryo head c...    55   2e-06
AM747720_941(AM747720|pid:none) Burkholderia cenocepacia J2315 c...    55   2e-06
CP000151_2802(CP000151|pid:none) Burkholderia sp. 383 chromosome...    55   2e-06
CP001096_2076(CP001096|pid:none) Rhodopseudomonas palustris TIE-...    54   3e-06
CU633749_2932(CU633749|pid:none) Cupriavidus taiwanensis str. LM...    54   3e-06
AM913104_1(AM913104|pid:none) Uncultured bacterium partial integ...    54   3e-06
BC137486_1(BC137486|pid:none) Homo sapiens centromere protein V,...    54   3e-06
CP001016_1406(CP001016|pid:none) Beijerinckia indica subsp. indi...    54   3e-06
CP000441_1821(CP000441|pid:none) Burkholderia ambifaria AMMD chr...    54   4e-06
U64842_7(U64842|pid:none) Caenorhabditis elegans cosmid F25B4, c...    54   4e-06
AE015451_639(AE015451|pid:none) Pseudomonas putida KT2440 comple...    54   4e-06
U64842_6(U64842|pid:none) Caenorhabditis elegans cosmid F25B4, c...    54   4e-06
EU016585_22(EU016585|pid:none) Uncultured marine microorganism H...    54   4e-06
CP001074_3074(CP001074|pid:none) Rhizobium etli CIAT 652, comple...    54   5e-06
AM933172_1398(AM933172|pid:none) Salmonella enterica subsp. ente...    54   5e-06
AE014613_1445(AE014613|pid:none) Salmonella enterica subsp. ente...    54   5e-06
CP000753_81(CP000753|pid:none) Shewanella baltica OS185, complet...    53   7e-06
BA000031_1790(BA000031|pid:none) Vibrio parahaemolyticus RIMD 22...    53   7e-06
AE006468_1597(AE006468|pid:none) Salmonella enterica subsp. ente...    53   9e-06
AE017220_1638(AE017220|pid:none) Salmonella enterica subsp. ente...    53   9e-06
CP001191_2667(CP001191|pid:none) Rhizobium leguminosarum bv. tri...    53   9e-06
AM743169_1020(AM743169|pid:none) Stenotrophomonas maltophilia K2...    52   1e-05
CP000629_2097(CP000629|pid:none) Agrobacterium radiobacter K84 c...    52   2e-05
CP000563_4196(CP000563|pid:none) Shewanella baltica OS155, compl...    52   2e-05
CP001025_2562(CP001025|pid:none) Burkholderia ambifaria MC40-6 c...    52   2e-05
CP000151_1684(CP000151|pid:none) Burkholderia sp. 383 chromosome...    52   2e-05
CP000546_2337(CP000546|pid:none) Burkholderia mallei NCTC 10229 ...    52   2e-05
CP000440_2706(CP000440|pid:none) Burkholderia ambifaria AMMD chr...    52   2e-05
CP000681_67(CP000681|pid:none) Shewanella putrefaciens CN-32, co...    52   2e-05
CP000891_87(CP000891|pid:none) Shewanella baltica OS195, complet...    52   2e-05
CP000931_624(CP000931|pid:none) Shewanella halifaxensis HAW-EB4,...    52   2e-05
CP000440_1602(CP000440|pid:none) Burkholderia ambifaria AMMD chr...    52   2e-05
AL953908_3(AL953908|pid:none) Zebrafish DNA sequence from clone ...    51   3e-05
CP001025_1613(CP001025|pid:none) Burkholderia ambifaria MC40-6 c...    51   3e-05
CP000444_84(CP000444|pid:none) Shewanella sp. MR-7, complete gen...    51   3e-05
CP000158_1305(CP000158|pid:none) Hyphomonas neptunium ATCC 15444...    50   4e-05
AM920436_391(AM920436|pid:none) Penicillium chrysogenum Wisconsi...    50   4e-05
AM746676_7456(AM746676|pid:none) Sorangium cellulosum 'So ce 56'...    50   4e-05
CP000790_2236(CP000790|pid:none) Vibrio harveyi ATCC BAA-1116 ch...    50   4e-05
AP007167_251(AP007167|pid:none) Aspergillus oryzae RIB40 genomic...    50   4e-05
CP001111_922(CP001111|pid:none) Stenotrophomonas maltophilia R55...    50   4e-05
CP000614_1602(CP000614|pid:none) Burkholderia vietnamiensis G4 c...    50   6e-05
CP000606_1700(CP000606|pid:none) Shewanella loihica PV-4, comple...    50   8e-05
CP000570_738(CP000570|pid:none) Burkholderia pseudomallei 668 ch...    49   1e-04
CP000934_2956(CP000934|pid:none) Cellvibrio japonicus Ueda107, c...    49   1e-04
CP000503_3961(CP000503|pid:none) Shewanella sp. W3-18-1, complet...    49   1e-04
AE013598_4455(AE013598|pid:none) Xanthomonas oryzae pv. oryzae K...    49   1e-04
AP008229_4287(AP008229|pid:none) Xanthomonas oryzae pv. oryzae M...    49   1e-04
CP000644_479(CP000644|pid:none) Aeromonas salmonicida subsp. sal...    49   2e-04
EU980390_2(EU980390|pid:none) Chaetomium chiversii strain CS-36-...    49   2e-04
AM236080_3404(AM236080|pid:none) Rhizobium leguminosarum bv. vic...    48   2e-04
AM039952_4269(AM039952|pid:none) Xanthomonas campestris pv. vesi...    48   2e-04
CP000462_3626(CP000462|pid:none) Aeromonas hydrophila subsp. hyd...    48   2e-04
AE014299_81(AE014299|pid:none) Shewanella oneidensis MR-1, compl...    48   2e-04
CP000884_5337(CP000884|pid:none) Delftia acidovorans SPH-1, comp...    48   3e-04
AP009384_1765(AP009384|pid:none) Azorhizobium caulinodans ORS 57...    48   3e-04
AP009385_2570(AP009385|pid:none) Burkholderia multivorans ATCC 1...    48   3e-04
CP000961_1538(CP000961|pid:none) Shewanella woodyi ATCC 51908, c...    47   4e-04
AL646052_3304(AL646052|pid:none) Ralstonia solanacearum GMI1000 ...    47   4e-04
CP000507_3587(CP000507|pid:none) Shewanella amazonensis SB2B, co...    47   4e-04
CP000086_609(CP000086|pid:none) Burkholderia thailandensis E264 ...    47   4e-04
CU638743_186(CU638743|pid:none) Podospora anserina genomic DNA c...    47   5e-04
CU694391_404(CU694391|pid:none) Ralstonia solanacearum strain Mo...    47   5e-04
AP006725_2238(AP006725|pid:none) Klebsiella pneumoniae NTUH-K204...    47   5e-04
CU207211_3106(CU207211|pid:none) Herminiimonas arsenicoxydans ch...    47   5e-04
AM270099_4(AM270099|pid:none) Aspergillus niger contig An04c0390...    46   8e-04
BA000032_50(BA000032|pid:none) Vibrio parahaemolyticus RIMD 2210...    46   8e-04
CP000302_1466(CP000302|pid:none) Shewanella denitrificans OS217,...    46   8e-04
CP000316_2369(CP000316|pid:none) Polaromonas sp. JS666, complete...    46   0.001
CP000769_1529(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c...    45   0.001
AM920689_4288(AM920689|pid:none) Xanthomonas campestris pv. camp...    45   0.002
AE008922_3989(AE008922|pid:none) Xanthomonas campestris pv. camp...    45   0.002
CP000472_4346(CP000472|pid:none) Shewanella piezotolerans WP3, c...    44   0.005
AM912556_1(AM912556|pid:none) Uncultured bacterium partial integ...    44   0.005
CP000438_3452(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA...    43   0.007
CP000821_1050(CP000821|pid:none) Shewanella sediminis HAW-EB3, c...    43   0.007
CP000927_4097(CP000927|pid:none) Caulobacter sp. K31, complete g...    43   0.009
EF144755_1(EF144755|pid:none) Populus trichocarpa clone WS01117_...    43   0.009
CP000677_56(CP000677|pid:none) Novosphingobium aromaticivorans D...    43   0.009
AM270176_30(AM270176|pid:none) Aspergillus niger contig An08c021...    42   0.012
CP000447_1564(CP000447|pid:none) Shewanella frigidimarina NCIMB ...    42   0.016
AE008923_4113(AE008923|pid:none) Xanthomonas axonopodis pv. citr...    42   0.016
AK108004_1(AK108004|pid:none) Oryza sativa Japonica Group cDNA c...    42   0.016
BT068812_1(BT068812|pid:none) Zea mays full-length cDNA clone ZM...    42   0.021
CP000927_2796(CP000927|pid:none) Caulobacter sp. K31, complete g...    42   0.021
BA000012_170(BA000012|pid:none) Mesorhizobium loti MAFF303099 DN...    40   0.046
CP000606_3332(CP000606|pid:none) Shewanella loihica PV-4, comple...    40   0.046
EF107105_16(EF107105|pid:none) Uncultured marine bacterium EB80_...    40   0.060
AY730278_1(AY730278|pid:none) Homo sapiens clone IMAGE:24166 hyp...    40   0.079
AM270136_28(AM270136|pid:none) Aspergillus niger contig An07c019...    39   0.13
CP000142_1471(CP000142|pid:none) Pelobacter carbinolicus DSM 238...    39   0.13
AL670006_3(AL670006|pid:none) Neurospora crassa DNA linkage grou...    39   0.13
CP000857_2028(CP000857|pid:none) Salmonella enterica subsp. ente...    39   0.18
CP000090_3213(CP000090|pid:none) Ralstonia eutropha JMP134 chrom...    38   0.23
AM039952_2953(AM039952|pid:none) Xanthomonas campestris pv. vesi...    38   0.30
AP007157_59(AP007157|pid:none) Aspergillus oryzae RIB40 genomic ...    37   0.39
CP000769_2801(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c...    37   0.39
AP009384_94(AP009384|pid:none) Azorhizobium caulinodans ORS 571 ...    37   0.67
CP001389_851(CP001389|pid:none) Rhizobium sp. NGR234, complete g...    37   0.67
CP000155_1259(CP000155|pid:none) Hahella chejuensis KCTC 2396, c...    36   0.87
CU638743_581(CU638743|pid:none) Podospora anserina genomic DNA c...    36   0.87
EU016566_14(EU016566|pid:none) Uncultured marine microorganism H...    36   0.87
AL591688_1117(AL591688|pid:none) Sinorhizobium meliloti 1021 com...    36   1.1
AP007164_726(AP007164|pid:none) Aspergillus oryzae RIB40 genomic...    35   1.5
CP000633_2619(CP000633|pid:none) Agrobacterium vitis S4 chromoso...    35   1.5
CP000749_220(CP000749|pid:none) Marinomonas sp. MWYL1, complete ...    35   1.9
BA000040_7301(BA000040|pid:none) Bradyrhizobium japonicum USDA 1...    35   1.9
CP001616_693(CP001616|pid:none) Tolumonas auensis DSM 9187, comp...    34   3.3
CP001389_1865(CP001389|pid:none) Rhizobium sp. NGR234, complete ...    34   3.3
CU633453_31(CU633453|pid:none) Podospora anserina genomic DNA ch...    34   3.3
CP000931_3999(CP000931|pid:none) Shewanella halifaxensis HAW-EB4...    34   3.3
CP001074_365(CP001074|pid:none) Rhizobium etli CIAT 652, complet...    34   4.3
CP000744_6178(CP000744|pid:none) Pseudomonas aeruginosa PA7, com...    34   4.3
AM039952_1608(AM039952|pid:none) Xanthomonas campestris pv. vesi...    34   4.3
AM912836_1(AM912836|pid:none) Uncultured bacterium partial integ...    34   4.3
BA000040_943(BA000040|pid:none) Bradyrhizobium japonicum USDA 11...    33   5.7
CP000158_3360(CP000158|pid:none) Hyphomonas neptunium ATCC 15444...    33   7.4
BA000040_40(BA000040|pid:none) Bradyrhizobium japonicum USDA 110...    33   7.4
AM911765_1(AM911765|pid:none) Uncultured bacterium partial integ...    33   9.7
CP000155_4118(CP000155|pid:none) Hahella chejuensis KCTC 2396, c...    33   9.7
AM911812_1(AM911812|pid:none) Uncultured bacterium partial integ...    33   9.7
AM913695_1(AM913695|pid:none) Uncultured bacterium partial integ...    33   9.7
AM913086_1(AM913086|pid:none) Uncultured bacterium partial integ...    33   9.7

>AL591985_1530(AL591985|pid:none) Sinorhizobium meliloti 1021
           plasmid pSymB.  &F96031(F96031)
          Length = 149

 Score =  102 bits (254), Expect = 1e-20
 Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
 Frame = +2

Query: 83  KEFFGSCHCGNVRFQCXXXXXXXXXXXX------------RCNCSYCLKTRFWEIIVCPK 226
           K + GSCHCG VRF                          RCNCS CLKTRFW++ V P+
Sbjct: 3   KTYHGSCHCGAVRFSANLDLAPEGKRSEAPRPGVWWTTTFRCNCSSCLKTRFWKVFVTPE 62

Query: 227 DFKVLKGENDQENYLYGSKINDNYFCKACGVNTYTLVKMEGVPNAPFYAVNVNTIEGITH 406
           DF +L GE     Y +G ++  + FC+ CGV+       E +   PF+AVN+  ++  T
Sbjct: 63  DFSLLSGEEALAEYRFGERMIRHVFCRHCGVHPLGSADFE-IMGGPFHAVNIACLDDATD 121

Query: 407 EQLSKLKVTFLDGATDNWQNEPIYHNHI 490
           E+L+   + + DG  D W   P   +++
Sbjct: 122 EELANAPIVYEDGRHDAWDRSPAVTSYL 149

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 861,949,186
Number of extensions: 16004892
Number of successful extensions: 41344
Number of sequences better than 10.0: 167
Number of HSP's gapped: 41152
Number of HSP's successfully gapped: 169
Length of query: 221
Length of database: 1,040,966,779
Length adjustment: 124
Effective length of query: 97
Effective length of database: 643,635,439
Effective search space: 62432637583
Effective search space used: 62432637583
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

 psg: 0.48  gvh: 0.33  alm: 0.50  top: 0.53  tms: 0.00  mit: 0.27  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.30  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 32.0 %: cytoplasmic
	 32.0 %: nuclear
	 20.0 %: mitochondrial
	  8.0 %: cytoskeletal
	  4.0 %: vacuolar
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U06251-1 is cyt