Contig-U06181-1
Contig ID Contig-U06181-1
Contig update 2001. 8.30
Contig sequence
>Contig-U06181-1 (Contig-U06181-1Q) /CSM_Contig/Contig-U06181-1Q.Seq.d
ATGTTTAAAAACTGAAAATAAGATGGAACCCATGGCAACAGTAACACTTA
AAGATATTAAAGAAGCACATAAAAGAATTGAAAAATATATACATAAAACA
CCTGTACTCACAAACTCTACAATCAATGAGTTAGCAGGTAAAGAGTTATA
TTTTAAATGTGAAAATTTACAAAAAACAGGAAGTTTTAAAATGCGTGGTG
CATGTAATGCAATTTTTTCATTAGATGAAGAAGAGTTAAGTAAAGGTGTT
GTAACTCATAGTAGTGGTAATCATGGTCAAGCATTATCATATGCATCAAA
AGTTAGATGTGTAAAATGTTATGTAGTTGTACCAGAGGATGCACCATCAG
TTAAATTGAATGCTATTTGTGGATATGGAGCAACTGTTACAAAATGTAAA
GCAACATTGGAAGCAAGAGAATCAAATACTAAACAATTAATTGAACAACA
TTCTTGTAAGTTAATTCATCCATTCGATAATTTACAAGTTATCGCAGGTC
AAGGTACAGCATCATTAGAATTAATGGAACAAGTTGAGAATTTAGATGCA
ATCATTACGCCAGTTGGTGGTGGTGGTTTGTTATCTGGTACTTGTATCAC
TGCAAAATCATTAAATCCAAATATTAAAGTATTTGCTGCTGAACCATTAG
GTGCTGATGATACTTATCGTTCACTGTTATCTGGTGAAATTCAAAAACAT
ACCCCTGGTAAACCAAATACAATCGCCGATGGTTTATTAACCACTGTTGG
TTCTCTCACTTTTCCAATCATTAAAGAAAATTGTGATGGTGTCATTCTTG
TAACTGAAGATGAAATTAAATATGCAATGAAATTGGTTTGGGAAAGAATG
AAAATAATTATTGAACCTTCATCTGCAACAACATTGGCTGCAATTTTAAA
ACAAGAGTTTAAAGATAAAAAAGGATATTAAAAAAGTAGGTATTATAATT
TACTGGCAGGTAATGTAGNATTTAAGTTCAATTTNCAAA

Gap no gap
Contig length 989
Chromosome number (1..6, M) 5
Chromosome length 5062330
Start point 2779341
End point 2780330
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U06181
List of clone(s)

est1=VFG682E,1,990
Translated Amino Acid sequence
CLKTENKMEPMATVTLKDIKEAHKRIEKYIHKTPVLTNSTINELAGKELYFKCENLQKTG
SFKMRGACNAIFSLDEEELSKGVVTHSSGNHGQALSYASKVRCVKCYVVVPEDAPSVKLN
AICGYGATVTKCKATLEARESNTKQLIEQHSCKLIHPFDNLQVIAGQGTASLELMEQVEN
LDAIITPVGGGGLLSGTCITAKSLNPNIKVFAAEPLGADDTYRSLLSGEIQKHTPGKPNT
IADGLLTTVGSLTFPIIKENCDGVILVTEDEIKYAMKLVWERMKIIIEPSSATTLAAILK
QEFKDKKGY*ksryynllagnvxfkfnxq


Translated Amino Acid sequence (All Frames)
Frame A:
mfkn*k*dgthgnsnt*ry*rst*kn*kiyt*ntcthklynq*vsr*rvif*m*kftknr
kf*nawcm*cnffir*rrvk*rccns**w*swssiiiciks*mckmlcsctrgctis*ie
cylwiwsncykm*snigskriky*tin*ttfl*vnssir*ftsyrrsrysiiringts*e
frcnhyaswwwwfviwylyhckiiksky*sicc*tirc**ylsftviw*nsktypw*tky
nrrwfinhcwfshfsnh*rkl*wchscn*r*n*icneiglgknenny*tficnnigcnfk
trv*r*krilkk*vl*ftgr*cxi*vqfx


Frame B:
CLKTENKMEPMATVTLKDIKEAHKRIEKYIHKTPVLTNSTINELAGKELYFKCENLQKTG
SFKMRGACNAIFSLDEEELSKGVVTHSSGNHGQALSYASKVRCVKCYVVVPEDAPSVKLN
AICGYGATVTKCKATLEARESNTKQLIEQHSCKLIHPFDNLQVIAGQGTASLELMEQVEN
LDAIITPVGGGGLLSGTCITAKSLNPNIKVFAAEPLGADDTYRSLLSGEIQKHTPGKPNT
IADGLLTTVGSLTFPIIKENCDGVILVTEDEIKYAMKLVWERMKIIIEPSSATTLAAILK
QEFKDKKGY*ksryynllagnvxfkfnxq


Frame C:
v*klkirwnpwqq*hlkilkkhikelkniyikhlysqtlqsms*qvksyilnvkiykkqe
vlkcvvhvmqffh*mkks*vkvl*livvvimvkhyhmhqkldv*nvm*lyqrmhhqln*m
lfvdmeqllqnvkqhwkqenqilnn*lnnilvs*fihsiiyklsqvkvqhh*n*wnklri
*mqslrqlvvvvcylvlvslqnh*iqilkylllnh*vlmilivhcylvkfkniplvnqiq
spmvy*pllvlslfqslkkivmvsfl*lkmklnmq*nwfgke*k*llnlhlqqhwlqf*n
kslkikkdikkvgiiiywqvm*xlssixk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U06181-1 (Contig-U06181-1Q)
/CSM_Contig/Contig-U06181-1Q.Seq.d
(989 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U06181-1 (Contig-U06181-1Q) /CSM_Contig/Conti... 1949 0.0
Contig-U06910-1 (Contig-U06910-1Q) /CSM_Contig/Conti... 40 0.004
Contig-U13720-1 (Contig-U13720-1Q) /CSM_Contig/Conti... 38 0.018
Contig-U12300-1 (Contig-U12300-1Q) /CSM_Contig/Conti... 38 0.018
Contig-U04484-1 (Contig-U04484-1Q) /CSM_Contig/Conti... 38 0.018
Contig-U14018-1 (Contig-U14018-1Q) /CSM_Contig/Conti... 36 0.070
Contig-U12039-1 (Contig-U12039-1Q) /CSM_Contig/Conti... 36 0.070
Contig-U11793-1 (Contig-U11793-1Q) /CSM_Contig/Conti... 36 0.070
Contig-U11252-1 (Contig-U11252-1Q) /CSM_Contig/Conti... 36 0.070
Contig-U10739-1 (Contig-U10739-1Q) /CSM_Contig/Conti... 36 0.070

>Contig-U06181-1 (Contig-U06181-1Q) /CSM_Contig/Contig-U06181-1Q.Seq.d
Length = 989

Score = 1949 bits (983), Expect = 0.0
Identities = 989/989 (100%)
Strand = Plus / Plus


Query: 1 atgtttaaaaactgaaaataagatggaacccatggcaacagtaacacttaaagatattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtttaaaaactgaaaataagatggaacccatggcaacagtaacacttaaagatattaa 60


Query: 61 agaagcacataaaagaattgaaaaatatatacataaaacacctgtactcacaaactctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaagcacataaaagaattgaaaaatatatacataaaacacctgtactcacaaactctac 120


Query: 121 aatcaatgagttagcaggtaaagagttatattttaaatgtgaaaatttacaaaaaacagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatcaatgagttagcaggtaaagagttatattttaaatgtgaaaatttacaaaaaacagg 180


Query: 181 aagttttaaaatgcgtggtgcatgtaatgcaattttttcattagatgaagaagagttaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagttttaaaatgcgtggtgcatgtaatgcaattttttcattagatgaagaagagttaag 240


Query: 241 taaaggtgttgtaactcatagtagtggtaatcatggtcaagcattatcatatgcatcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taaaggtgttgtaactcatagtagtggtaatcatggtcaagcattatcatatgcatcaaa 300


Query: 301 agttagatgtgtaaaatgttatgtagttgtaccagaggatgcaccatcagttaaattgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agttagatgtgtaaaatgttatgtagttgtaccagaggatgcaccatcagttaaattgaa 360


Query: 361 tgctatttgtggatatggagcaactgttacaaaatgtaaagcaacattggaagcaagaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgctatttgtggatatggagcaactgttacaaaatgtaaagcaacattggaagcaagaga 420


Query: 421 atcaaatactaaacaattaattgaacaacattcttgtaagttaattcatccattcgataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcaaatactaaacaattaattgaacaacattcttgtaagttaattcatccattcgataa 480


Query: 481 tttacaagttatcgcaggtcaaggtacagcatcattagaattaatggaacaagttgagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttacaagttatcgcaggtcaaggtacagcatcattagaattaatggaacaagttgagaa 540


Query: 541 tttagatgcaatcattacgccagttggtggtggtggtttgttatctggtacttgtatcac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttagatgcaatcattacgccagttggtggtggtggtttgttatctggtacttgtatcac 600


Query: 601 tgcaaaatcattaaatccaaatattaaagtatttgctgctgaaccattaggtgctgatga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgcaaaatcattaaatccaaatattaaagtatttgctgctgaaccattaggtgctgatga 660


Query: 661 tacttatcgttcactgttatctggtgaaattcaaaaacatacccctggtaaaccaaatac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tacttatcgttcactgttatctggtgaaattcaaaaacatacccctggtaaaccaaatac 720


Query: 721 aatcgccgatggtttattaaccactgttggttctctcacttttccaatcattaaagaaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aatcgccgatggtttattaaccactgttggttctctcacttttccaatcattaaagaaaa 780


Query: 781 ttgtgatggtgtcattcttgtaactgaagatgaaattaaatatgcaatgaaattggtttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttgtgatggtgtcattcttgtaactgaagatgaaattaaatatgcaatgaaattggtttg 840


Query: 841 ggaaagaatgaaaataattattgaaccttcatctgcaacaacattggctgcaattttaaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ggaaagaatgaaaataattattgaaccttcatctgcaacaacattggctgcaattttaaa 900


Query: 901 acaagagtttaaagataaaaaaggatattaaaaaagtaggtattataatttactggcagg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 acaagagtttaaagataaaaaaggatattaaaaaagtaggtattataatttactggcagg 960


Query: 961 taatgtagnatttaagttcaatttncaaa 989
|||||||||||||||||||||||||||||
Sbjct: 961 taatgtagnatttaagttcaatttncaaa 989


>Contig-U06910-1 (Contig-U06910-1Q) /CSM_Contig/Contig-U06910-1Q.Seq.d
Length = 322

Score = 40.1 bits (20), Expect = 0.004
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 915 ataaaaaaggatattaaaaa 934
||||||||||||||||||||
Sbjct: 69 ataaaaaaggatattaaaaa 88


Score = 34.2 bits (17), Expect = 0.28
Identities = 20/21 (95%)
Strand = Plus / Plus


Query: 915 ataaaaaaggatattaaaaaa 935
||||||||||||||| |||||
Sbjct: 42 ataaaaaaggatattgaaaaa 62


>Contig-U13720-1 (Contig-U13720-1Q) /CSM_Contig/Contig-U13720-1Q.Seq.d
Length = 558

Score = 38.2 bits (19), Expect = 0.018
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 432 aacaattaattgaacaaca 450
|||||||||||||||||||
Sbjct: 110 aacaattaattgaacaaca 128


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,680
Number of Sequences: 6905
Number of extensions: 16680
Number of successful extensions: 2186
Number of sequences better than 10.0: 213
length of query: 989
length of database: 5,674,871
effective HSP length: 16
effective length of query: 973
effective length of database: 5,564,391
effective search space: 5414152443
effective search space used: 5414152443
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11. 7
Homology vs DNA
Query= Contig-U06181-1 (Contig-U06181-1Q) /CSM_Contig/Contig-U06181-1Q.Seq.d
(989 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ413239) Dictyostelium discoideum cDNA clone:ddv14c22, 5' ... 1132 0.0 1
(BJ431599) Dictyostelium discoideum cDNA clone:ddv14c22, 3' ... 1114 0.0 1
(ER468554) 1092963939374 Global-Ocean-Sampling_GS-35-01-01-1... 66 3e-06 1
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734... 60 2e-04 1
(EK501940) 1095505220691 Global-Ocean-Sampling_GS-32-01-01-1... 46 2e-04 2
(ER518173) 1093015533903 Global-Ocean-Sampling_GS-35-01-01-1... 48 6e-04 2
(AL672103) Mouse DNA sequence from clone RP23-375G11 on chro... 40 0.010 7
(EK168427) 1095458063567 Global-Ocean-Sampling_GS-31-01-01-1... 42 0.010 2
(ER631387) 1093018453567 Global-Ocean-Sampling_GS-36-01-01-2... 52 0.041 1
(ER589633) 1093016191858 Global-Ocean-Sampling_GS-36-01-01-2... 52 0.041 1
(EJ412097) 1093012156043 Global-Ocean-Sampling_GS-28-01-01-1... 52 0.041 1
(EJ223433) 1092351313327 Global-Ocean-Sampling_GS-27-01-01-1... 52 0.041 1
(EL934598) Centeaurea_plate-011_E21.trimmed.seq Centaurea no... 52 0.041 1
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 52 0.041 1
(DY828978) CTOY4664.b1_O13.ab1 CTO(XYZ) dandelion Taraxacum ... 44 0.041 2
(DY824106) CTOY15761.b1_A05.ab1 CTO(XYZ) dandelion Taraxacum... 44 0.044 2
(ER484661) 1093015290694 Global-Ocean-Sampling_GS-35-01-01-1... 48 0.047 2
(EJ547697) 1092959414448 Global-Ocean-Sampling_GS-29-01-01-1... 36 0.067 3
(EJ768992) 1092963364791 Global-Ocean-Sampling_GS-30-02-01-1... 36 0.088 3
(CZ968695) 168738 Tomato MboI BAC Library Solanum lycopersic... 42 0.11 3
(EA063986) Sequence 1811 from patent US 7171311. 42 0.11 3
(DJ056642) METHODS AND KITS FOR INVESTIGATING CANCER. 42 0.11 3
(DJ021925) NOVEL COMPOSITIONS AND METHODS FOR THE TREATMENT ... 42 0.11 3
(DD416476) Diagnosis and Prognosis of Breast Cancer Patients. 42 0.11 3
(DD131225) Diagnosis and Prognosis of Breast Cancer Patients. 42 0.11 3
(CS080926) Sequence 129 from Patent WO2005040414. 42 0.11 3
(CS063145) Sequence 129 from Patent EP1522594. 42 0.11 3
(CS045596) Sequence 6150 from Patent WO2005019258. 42 0.11 3
(CS042593) Sequence 3147 from Patent WO2005019258. 42 0.11 3
(CS036644) Sequence 6150 from Patent WO2005016962. 42 0.11 3
(CS033641) Sequence 3147 from Patent WO2005016962. 42 0.11 3
(CQ896547) Sequence 371 from Patent WO2004076614. 42 0.11 3
(CQ896471) Sequence 295 from Patent WO2004076614. 42 0.11 3
(CQ776553) Sequence 239 from Patent EP1394274. 42 0.11 3
(BD446855) Method for testing for broncheal asthma, or chron... 42 0.11 3
(AK000280) Homo sapiens cDNA FLJ20273 fis, clone HEP01750. 42 0.11 3
(FC632222) CAXT8067.fwd CAXT Lottia gigantea from mantle Lot... 50 0.16 1
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 44 0.26 12
(AL590153) Zebrafish DNA sequence from clone RP71-71M17 in l... 38 0.30 6
(EJ600360) 1092961142167 Global-Ocean-Sampling_GS-29-01-01-1... 36 0.34 3
(EJ990661) 1093023045596 Global-Ocean-Sampling_GS-30-02-01-1... 34 0.41 4
(EI475130) PV_GBa0085E24.r PV_GBa Phaseolus vulgaris genomic... 38 0.46 2
(FH664978) CHO_OF5012xc01f1.ab1 CHO_OF5 Nicotiana tabacum ge... 38 0.60 2
(FF573667) TTEFZ62THB Tetrahymena thermophila conjugation cD... 40 0.61 2
(BV593598) G591P56819RB6.T0 Clint Pan troglodytes verus STS ... 48 0.64 1
(BV590420) G591P641660FC9.T0 Clint Pan troglodytes verus STS... 48 0.64 1
(BV569030) sur19a03.g1 Clint Pan troglodytes verus STS genom... 48 0.64 1
(Z80219) Caenorhabditis elegans Cosmid T01H8. 48 0.64 1
(AF318276) Ceratitis capitata white protein (white) gene, wh... 48 0.64 1
(AF318275) Ceratitis capitata white protein (white) gene, wh... 48 0.64 1
(AC116606) Homo sapiens chromosome 5 clone RP11-478P10, comp... 48 0.64 1
(AC106747) Homo sapiens chromosome 5 clone RP11-152C23, comp... 48 0.64 1
(AC150640) Bos taurus clone CH240-185H6, WORKING DRAFT SEQUE... 48 0.64 1
(AC135607) Pan troglodytes clone ptb-87o21, WORKING DRAFT SE... 48 0.64 1
(AC113374) Homo sapiens chromosome 5 clone RP11-225P16, WORK... 48 0.64 1
(AC223145) Bos taurus clone CH240-428G10, WORKING DRAFT SEQU... 48 0.64 1
(AC192247) Zea mays chromosome 4 clone CH201-21E18; ZMMBBc00... 48 0.64 1
(ER816235) POTJI26TF Solanum tuberosum RHPOTKEY BAC ends Sol... 48 0.64 1
(ER422176) 1092963713367 Global-Ocean-Sampling_GS-35-01-01-1... 48 0.64 1
(EK144037) 1095456011095 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.64 1
(EK054803) 1092960008380 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.64 1
(EK025821) 1092955365865 Global-Ocean-Sampling_GS-31-01-01-1... 48 0.64 1
(EJ887323) 1093018424532 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.64 1
(EJ877086) 1093018375754 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.64 1
(EJ793678) 1093017389176 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.64 1
(EJ754287) 1092963063050 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.64 1
(EJ741968) 1092962025096 Global-Ocean-Sampling_GS-30-02-01-1... 48 0.64 1
(EJ507222) 1095403727044 Global-Ocean-Sampling_GS-28-01-01-1... 48 0.64 1
(EJ306866) 1095390102296 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.64 1
(EJ280611) 1095366052387 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.64 1
(EJ255258) 1095349004963 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.64 1
(EJ189140) 1092344175947 Global-Ocean-Sampling_GS-27-01-01-1... 48 0.64 1
(EE368427) LB029107.CR_H08 GC_BGC-29 Bos taurus cDNA clone I... 48 0.64 1
(EE360284) LB02970.CR_N23 GC_BGC-29 Bos taurus cDNA clone IM... 48 0.64 1
(CB387342) OSTF078H10_1 AD-wrmcDNA Caenorhabditis elegans cD... 48 0.64 1
(FF102596) CPAD-aad42g07.b1 PB2801_EST_CPAD1 Caenorhabditis ... 36 0.74 3
(EJ421621) 1093012234379 Global-Ocean-Sampling_GS-28-01-01-1... 34 0.86 3
(CP000361) Arcobacter butzleri RM4018, complete genome. 36 1.0 20
(ER627289) 1093018289308 Global-Ocean-Sampling_GS-36-01-01-2... 34 1.1 3
(AC152695) Bos taurus clone CH240-5H20, WORKING DRAFT SEQUEN... 36 1.3 2
(AC162819) Bos taurus clone CH240-126C8, WORKING DRAFT SEQUE... 36 1.3 2
(AE009951) Fusobacterium nucleatum subsp. nucleatum ATCC 255... 36 1.4 16
(AC124882) Rattus norvegicus clone CH230-334B2, WORKING DRAF... 44 1.5 2
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 36 1.8 11
(DC225676) Plasmodium berghei strain ANKA cDNA clone:SG00336... 36 1.8 2
(DC218857) Plasmodium berghei strain ANKA cDNA clone:MZ00014... 36 1.9 2
(DW081953) CLPX4797.b1_J23.ab1 CLP(XYZ) lettuce perennis Lac... 38 1.9 2
(AE014821) Plasmodium falciparum 3D7 chromosome 14 section 6... 34 2.1 10
(EK158134) 1095458013585 Global-Ocean-Sampling_GS-31-01-01-1... 38 2.2 2
(AC156044) Bos taurus clone CH240-46H1, *** SEQUENCING IN PR... 40 2.3 2
(EJ332482) 1092963450297 Global-Ocean-Sampling_GS-28-01-01-1... 36 2.3 2
(AC148567) Canis familiaris clone RP81-68F13, WORKING DRAFT ... 38 2.4 5
(EK216127) 1095460119242 Global-Ocean-Sampling_GS-31-01-01-1... 44 2.4 2
(AE001437) Clostridium acetobutylicum ATCC 824, complete gen... 34 2.4 18
(EK406384) 1095505006983 Global-Ocean-Sampling_GS-31-01-01-1... 42 2.5 2
(DW092465) CLPY3768.b1_P06.ab1 CLP(XYZ) lettuce perennis Lac... 38 2.5 2
(AC093766) Homo sapiens BAC clone RP11-98O2 from 4, complete... 46 2.5 1
(AC020642) Homo sapiens chromosome 10 clone RP11-275D14, com... 46 2.5 1
(AC135145) Rattus norvegicus clone CH230-154J12, *** SEQUENC... 46 2.5 1
(AC132151) Homo sapiens chromosome UNK clone RP13-593B24, WO... 46 2.5 1

>(BJ413239) Dictyostelium discoideum cDNA clone:ddv14c22, 5' end,
single read.
Length = 571

Score = 1132 bits (571), Expect = 0.0
Identities = 571/571 (100%)
Strand = Plus / Plus


Query: 1 atgtttaaaaactgaaaataagatggaacccatggcaacagtaacacttaaagatattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atgtttaaaaactgaaaataagatggaacccatggcaacagtaacacttaaagatattaa 60


Query: 61 agaagcacataaaagaattgaaaaatatatacataaaacacctgtactcacaaactctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaagcacataaaagaattgaaaaatatatacataaaacacctgtactcacaaactctac 120


Query: 121 aatcaatgagttagcaggtaaagagttatattttaaatgtgaaaatttacaaaaaacagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatcaatgagttagcaggtaaagagttatattttaaatgtgaaaatttacaaaaaacagg 180


Query: 181 aagttttaaaatgcgtggtgcatgtaatgcaattttttcattagatgaagaagagttaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagttttaaaatgcgtggtgcatgtaatgcaattttttcattagatgaagaagagttaag 240


Query: 241 taaaggtgttgtaactcatagtagtggtaatcatggtcaagcattatcatatgcatcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taaaggtgttgtaactcatagtagtggtaatcatggtcaagcattatcatatgcatcaaa 300


Query: 301 agttagatgtgtaaaatgttatgtagttgtaccagaggatgcaccatcagttaaattgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agttagatgtgtaaaatgttatgtagttgtaccagaggatgcaccatcagttaaattgaa 360


Query: 361 tgctatttgtggatatggagcaactgttacaaaatgtaaagcaacattggaagcaagaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgctatttgtggatatggagcaactgttacaaaatgtaaagcaacattggaagcaagaga 420


Query: 421 atcaaatactaaacaattaattgaacaacattcttgtaagttaattcatccattcgataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atcaaatactaaacaattaattgaacaacattcttgtaagttaattcatccattcgataa 480


Query: 481 tttacaagttatcgcaggtcaaggtacagcatcattagaattaatggaacaagttgagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttacaagttatcgcaggtcaaggtacagcatcattagaattaatggaacaagttgagaa 540


Query: 541 tttagatgcaatcattacgccagttggtggt 571
|||||||||||||||||||||||||||||||
Sbjct: 541 tttagatgcaatcattacgccagttggtggt 571

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,316,275,919
Number of extensions: 84002825
Number of successful extensions: 7654994
Number of sequences better than 10.0: 243
Length of query: 989
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 965
Effective length of database: 97,308,875,965
Effective search space: 93903065306225
Effective search space used: 93903065306225
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.21
Homology vs Protein
Query= Contig-U06181-1 (Contig-U06181-1Q) /CSM_Contig/Contig-U06181-1Q.Seq.d
(989 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(A0JNI4) RecName: Full=Serine racemase; EC=5.1.1.18; &... 298 1e-79
(Q9QZX7) RecName: Full=Serine racemase; EC=5.1.1.18; &... 297 3e-79
AK028034_1(AK028034|pid:none) Mus musculus 18-day embryo whole b... 294 3e-78
AB171134_1(AB171134|pid:none) Macaca fascicularis brain cDNA clo... 293 5e-78
AB173668_1(AB173668|pid:none) Macaca fascicularis brain cDNA clo... 293 8e-78
CP000389_248(CP000389|pid:none) Mesorhizobium sp. BNC1 plasmid 1... 291 2e-77
(Q9GZT4) RecName: Full=Serine racemase; EC=5.1.1.18; &... 291 2e-77
AB271213_1(AB271213|pid:none) Hordeum vulgare HvSR mRNA for seri... 285 2e-75
AY542311_15(AY542311|pid:none) Sorghum bicolor clone SB20O07 b1-... 285 2e-75
GN098600_1(GN098600|pid:none) Sequence 3381 from Patent WO200903... 285 2e-75
AM746676_3851(AM746676|pid:none) Sorangium cellulosum 'So ce 56'... 284 4e-75
AL049500_7(AL049500|pid:none) Arabidopsis thaliana DNA chromosom... 283 6e-75
CP000830_884(CP000830|pid:none) Dinoroseobacter shibae DFL 12, c... 283 6e-75
AC151526_28(AC151526|pid:none) Medicago truncatula clone mth2-78... 283 8e-75
BT037054_1(BT037054|pid:none) Zea mays full-length cDNA clone ZM... 282 1e-74
GN098596_1(GN098596|pid:none) Sequence 3377 from Patent WO200903... 282 1e-74
CP000362_2683(CP000362|pid:none) Roseobacter denitrificans OCh 1... 281 3e-74
CP001002_420(CP001002|pid:none) Methylobacterium radiotolerans J... 281 3e-74
CP000082_1389(CP000082|pid:none) Psychrobacter arcticus 273-4, c... 278 2e-73
BT052623_1(BT052623|pid:none) Medicago truncatula clone MTYFD_FE... 277 3e-73
CP001339_1129(CP001339|pid:none) Thioalkalivibrio sp. HL-EbGR7, ... 275 1e-72
CP000490_1070(CP000490|pid:none) Paracoccus denitrificans PD1222... 274 4e-72
CP000032_145(CP000032|pid:none) Ruegeria pomeroyi DSS-3 plasmid ... 272 1e-71
CP000377_2699(CP000377|pid:none) Silicibacter sp. TM1040, comple... 268 3e-70
CP001330_398(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 264 4e-69
EU966029_1(EU966029|pid:none) Zea mays clone 290968 unknown mRNA. 260 6e-68
AK031687_1(AK031687|pid:none) Mus musculus 13 days embryo male t... 255 1e-66
AM942759_1217(AM942759|pid:none) Proteus mirabilis strain HI4320... 254 4e-66
(P36007) RecName: Full=Threo-3-hydroxyaspartate ammonia-lyase; ... 251 3e-65
BX950851_2018(BX950851|pid:none) Erwinia carotovora subsp. atros... 244 3e-63
AM420293_3324(AM420293|pid:none) Saccharopolyspora erythraea NRR... 244 4e-63
CP001111_3827(CP001111|pid:none) Stenotrophomonas maltophilia R5... 244 4e-63
CP000686_168(CP000686|pid:none) Roseiflexus sp. RS-1, complete g... 243 6e-63
AL939106_272(AL939106|pid:none) Streptomyces coelicolor A3(2) co... 243 1e-62
AM039952_394(AM039952|pid:none) Xanthomonas campestris pv. vesic... 242 1e-62
CP000117_2736(CP000117|pid:none) Anabaena variabilis ATCC 29413,... 242 1e-62
AL834378_1(AL834378|pid:none) Homo sapiens mRNA; cDNA DKFZp762A2... 242 2e-62
AM238664_868(AM238664|pid:none) Streptomyces ambofaciens ATCC 23... 241 3e-62
CP000441_662(CP000441|pid:none) Burkholderia ambifaria AMMD chro... 241 4e-62
AP008229_209(AP008229|pid:none) Xanthomonas oryzae pv. oryzae MA... 240 5e-62
CP000159_1236(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 239 8e-62
AM286415_3060(AM286415|pid:none) Yersinia enterocolitica subsp. ... 239 1e-61
CP001291_299(CP001291|pid:none) Cyanothece sp. PCC 7424, complet... 238 2e-61
CP001037_1174(CP001037|pid:none) Nostoc punctiforme PCC 73102, c... 238 2e-61
CP000804_4244(CP000804|pid:none) Roseiflexus castenholzii DSM 13... 238 2e-61
AE008923_379(AE008923|pid:none) Xanthomonas axonopodis pv. citri... 236 7e-61
CP000353_1200(CP000353|pid:none) Ralstonia metallidurans CH34 me... 236 7e-61
AE015927_2359(AE015927|pid:none) Clostridium tetani E88, complet... 236 9e-61
AM747721_1594(AM747721|pid:none) Burkholderia cenocepacia J2315 ... 236 9e-61
CP001069_229(CP001069|pid:none) Ralstonia pickettii 12J chromoso... 236 1e-60
CP000615_1654(CP000615|pid:none) Burkholderia vietnamiensis G4 c... 234 3e-60
CU459141_1021(CU459141|pid:none) Acinetobacter baumannii str. AY... 233 6e-60
AE008922_379(AE008922|pid:none) Xanthomonas campestris pv. campe... 231 2e-59
CP000884_3508(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 231 2e-59
CP000521_2640(CP000521|pid:none) Acinetobacter baumannii ATCC 17... 230 6e-59
CP000091_879(CP000091|pid:none) Ralstonia eutropha JMP134 chromo... 229 1e-58
(O59791) RecName: Full=Uncharacterized protein C320.14; &AL0222... 228 2e-58
BX571861_189(BX571861|pid:none) Photorhabdus luminescens subsp. ... 228 2e-58
CP001349_146(CP001349|pid:none) Methylobacterium nodulans ORS 20... 227 4e-58
AL646053_1517(AL646053|pid:none) Ralstonia solanacearum GMI1000 ... 227 4e-58
AM180355_2586(AM180355|pid:none) Clostridium difficile 630 compl... 226 9e-58
BX640434_28(BX640434|pid:none) Bordetella parapertussis strain 1... 226 1e-57
CP000758_1791(CP000758|pid:none) Ochrobactrum anthropi ATCC 4918... 226 1e-57
CP001098_924(CP001098|pid:none) Halothermothrix orenii H 168, co... 225 2e-57
BX640421_157(BX640421|pid:none) Bordetella pertussis strain Toha... 225 2e-57
CP000728_3488(CP000728|pid:none) Clostridium botulinum F str. La... 224 4e-57
CP000962_3509(CP000962|pid:none) Clostridium botulinum A3 str. L... 224 5e-57
CP000943_4359(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 223 6e-57
CP000512_3161(CP000512|pid:none) Acidovorax citrulli AAC00-1, co... 223 8e-57
CP000939_3518(CP000939|pid:none) Clostridium botulinum B1 str. O... 223 8e-57
AE004091_2684(AE004091|pid:none) Pseudomonas aeruginosa PAO1, co... 223 1e-56
AM902716_903(AM902716|pid:none) Bordetella petrii strain DSM 128... 221 4e-56
AB433985_1(AB433985|pid:none) Delftia sp. HT23 lthadh gene for L... 220 5e-56
BX571965_2658(BX571965|pid:none) Burkholderia pseudomallei strai... 220 5e-56
CP000884_5737(CP000884|pid:none) Delftia acidovorans SPH-1, comp... 220 7e-56
CP000726_3411(CP000726|pid:none) Clostridium botulinum A str. AT... 219 9e-56
BA000043_1591(BA000043|pid:none) Geobacillus kaustophilus HTA426... 219 9e-56
AM412317_3510(AM412317|pid:none) Clostridium botulinum A str. AT... 219 9e-56
CP000141_191(CP000141|pid:none) Carboxydothermus hydrogenoforman... 219 1e-55
CP001052_3047(CP001052|pid:none) Burkholderia phytofirmans PsJN ... 217 6e-55
CP000270_3521(CP000270|pid:none) Burkholderia xenovorans LB400 c... 215 2e-54
AM181176_2717(AM181176|pid:none) Pseudomonas fluorescens SBW25 c... 214 3e-54
CP000312_1152(CP000312|pid:none) Clostridium perfringens SM101, ... 213 1e-53
CP001336_1069(CP001336|pid:none) Desulfitobacterium hafniense DC... 213 1e-53
AP008230_4244(AP008230|pid:none) Desulfitobacterium hafniense Y5... 212 1e-53
CP000246_1339(CP000246|pid:none) Clostridium perfringens ATCC 13... 212 2e-53
CP000382_1174(CP000382|pid:none) Clostridium novyi NT, complete ... 210 5e-53
CP001146_1316(CP001146|pid:none) Dictyoglomus thermophilum H-6-1... 210 5e-53
CP000141_2381(CP000141|pid:none) Carboxydothermus hydrogenoforma... 209 1e-52
AL445063_111(AL445063|pid:none) Thermoplasma acidophilum complet... 208 2e-52
AJ544863_3(AJ544863|pid:none) Thermotoga sp. RQ2 ORF19 (partial)... 207 3e-52
AE017261_238(AE017261|pid:none) Picrophilus torridus DSM 9790, c... 207 6e-52
CP000721_1546(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 206 1e-51
CP000749_3048(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 202 2e-50
BA000028_2616(BA000028|pid:none) Oceanobacillus iheyensis HTE831... 202 2e-50
CP000628_2855(CP000628|pid:none) Agrobacterium radiobacter K84 c... 201 4e-50
EU016627_16(EU016627|pid:none) Uncultured Group I marine crenarc... 201 4e-50
CP000781_1495(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 200 5e-50
CP000480_3413(CP000480|pid:none) Mycobacterium smegmatis str. MC... 200 7e-50
AE005673_3079(AE005673|pid:none) Caulobacter crescentus CB15, co... 199 9e-50
BA000011_190(BA000011|pid:none) Thermoplasma volcanium GSS1 DNA,... 199 1e-49
CP000539_1818(CP000539|pid:none) Acidovorax sp. JS42, complete g... 199 1e-49
T24337(T24337) threonine ammonia-lyase (EC 4.3.1.19) T01H8.2 [si... 199 2e-49
CP000822_4393(CP000822|pid:none) Citrobacter koseri ATCC BAA-895... 199 2e-49
CU468230_624(CU468230|pid:none) Acinetobacter baumannii str. SDF... 198 2e-49
CP000636_95(CP000636|pid:none) Agrobacterium vitis S4 plasmid pA... 198 2e-49
CP000077_662(CP000077|pid:none) Sulfolobus acidocaldarius DSM 63... 198 2e-49
BX293980_113(BX293980|pid:none) Mycoplasma mycoides subsp. mycoi... 197 4e-49
CP001365_288(CP001365|pid:none) Halorubrum lacusprofundi ATCC 49... 197 4e-49
CP000930_1199(CP000930|pid:none) Heliobacterium modesticaldum Ic... 197 4e-49
CP001104_1011(CP001104|pid:none) Eubacterium eligens ATCC 27750,... 197 5e-49
CP000026_2905(CP000026|pid:none) Salmonella enterica subsp. ente... 197 5e-49
AM933172_3071(AM933172|pid:none) Salmonella enterica subsp. ente... 197 5e-49
AB0897(AB0897) threonine ammonia-lyase (EC 4.3.1.19) [similarity... 197 5e-49
AP009389_102(AP009389|pid:none) Pelotomaculum thermopropionicum ... 197 6e-49
CP001138_3196(CP001138|pid:none) Salmonella enterica subsp. ente... 196 8e-49
CP000575_518(CP000575|pid:none) Staphylothermus marinus F1, comp... 196 8e-49
CP000916_284(CP000916|pid:none) Thermotoga neapolitana DSM 4359,... 196 1e-48
AM236080_4054(AM236080|pid:none) Rhizobium leguminosarum bv. vic... 196 1e-48
GN098530_1(GN098530|pid:none) Sequence 3311 from Patent WO200903... 195 2e-48
CP000227_2286(CP000227|pid:none) Bacillus cereus Q1, complete ge... 195 2e-48
AM286415_4002(AM286415|pid:none) Yersinia enterocolitica subsp. ... 195 2e-48
CP000874_1939(CP000874|pid:none) Rhizobium sp. NGR234 plasmid pN... 195 2e-48
A97687(A97687) probable serine/threonine dehydratase, degradativ... 195 2e-48
CP000361_1962(CP000361|pid:none) Arcobacter butzleri RM4018, com... 195 2e-48
AE006469_1030(AE006469|pid:none) Sinorhizobium meliloti 1021 pla... 195 2e-48
AE016877_2253(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 194 3e-48
CP000148_3036(CP000148|pid:none) Geobacter metallireducens GS-15... 194 4e-48
CP001191_3246(CP001191|pid:none) Rhizobium leguminosarum bv. tri... 194 4e-48
CP001407_2370(CP001407|pid:none) Bacillus cereus 03BB102, comple... 194 5e-48
CP001074_3737(CP001074|pid:none) Rhizobium etli CIAT 652, comple... 194 5e-48
CP000968_514(CP000968|pid:none) Candidatus Korarchaeum cryptofil... 193 7e-48
CP001390_689(CP001390|pid:none) Geobacter sp. FRC-32, complete g... 193 7e-48
AE017220_3190(AE017220|pid:none) Salmonella enterica subsp. ente... 193 7e-48
CP000032_431(CP000032|pid:none) Ruegeria pomeroyi DSS-3 plasmid ... 193 9e-48
CP001177_2394(CP001177|pid:none) Bacillus cereus AH187, complete... 193 9e-48
(Q2FH01) RecName: Full=Threonine dehydratase catabolic; ... 193 9e-48
CP000885_2411(CP000885|pid:none) Clostridium phytofermentans ISD... 193 9e-48
(P0AGF6) RecName: Full=Threonine dehydratase catabolic; ... 192 1e-47
CP000493_207(CP000493|pid:none) Hyperthermus butylicus DSM 5456,... 192 1e-47
AY643478_42(AY643478|pid:none) Edwardsiella tarda strain PPD130/... 192 1e-47
AE017180_484(AE017180|pid:none) Geobacter sulfurreducens PCA, co... 192 1e-47
AM774415_1664(AM774415|pid:none) Halobacterium salinarum complet... 192 1e-47
AE009951_1984(AE009951|pid:none) Fusobacterium nucleatum subsp. ... 192 1e-47
CP000038_3053(CP000038|pid:none) Shigella sonnei Ss046, complete... 192 1e-47
AE017194_2483(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 192 2e-47
(Q7A5L8) RecName: Full=Threonine dehydratase catabolic; ... 192 2e-47
CP000557_2238(CP000557|pid:none) Geobacillus thermodenitrificans... 192 2e-47
CU928158_2951(CU928158|pid:none) Escherichia fergusonii ATCC 354... 192 2e-47
CP000698_3961(CP000698|pid:none) Geobacter uraniireducens Rf4, c... 191 3e-47
CP001472_1334(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 191 3e-47
CP000724_3289(CP000724|pid:none) Alkaliphilus metalliredigens QY... 191 3e-47
AP009256_1570(AP009256|pid:none) Bifidobacterium adolescentis AT... 191 4e-47
CP000487_708(CP000487|pid:none) Campylobacter fetus subsp. fetus... 191 4e-47
CP000529_109(CP000529|pid:none) Polaromonas naphthalenivorans CJ... 190 6e-47
CP000376_532(CP000376|pid:none) Silicibacter sp. TM1040 mega pla... 190 6e-47
CP000158_1133(CP000158|pid:none) Hyphomonas neptunium ATCC 15444... 190 6e-47
AP009178_808(AP009178|pid:none) Nitratiruptor sp. SB155-2 genomi... 190 7e-47
CP000768_982(CP000768|pid:none) Campylobacter jejuni subsp. doyl... 190 7e-47
(Q2YY67) RecName: Full=Threonine dehydratase catabolic; ... 189 1e-46
CP001472_1403(CP001472|pid:none) Acidobacterium capsulatum ATCC ... 189 2e-46
CP000774_2474(CP000774|pid:none) Parvibaculum lavamentivorans DS... 188 2e-46
AM920421_141(AM920421|pid:none) Penicillium chrysogenum Wisconsi... 188 3e-46
CP001182_2747(CP001182|pid:none) Acinetobacter baumannii AB0057,... 188 3e-46
AJ938182_1303(AJ938182|pid:none) Staphylococcus aureus RF122 com... 187 5e-46
CP000852_923(CP000852|pid:none) Caldivirga maquilingensis IC-167... 187 5e-46
CP000860_65(CP000860|pid:none) Candidatus Desulforudis audaxviat... 187 5e-46
CP000394_2290(CP000394|pid:none) Granulibacter bethesdensis CGDN... 186 1e-45
CP001095_2370(CP001095|pid:none) Bifidobacterium longum subsp. i... 186 1e-45
CP000155_6612(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 186 1e-45
CP000251_3437(CP000251|pid:none) Anaeromyxobacter dehalogenans 2... 185 2e-45
CP001150_570(CP001150|pid:none) Rhodobacter sphaeroides KD131 ch... 185 2e-45
CP000454_1158(CP000454|pid:none) Arthrobacter sp. FB24, complete... 185 2e-45
CP000580_2728(CP000580|pid:none) Mycobacterium sp. JLS, complete... 185 2e-45
CP001124_3648(CP001124|pid:none) Geobacter bemidjiensis Bem, com... 185 2e-45
CP000884_115(CP000884|pid:none) Delftia acidovorans SPH-1, compl... 184 4e-45
AP011115_5907(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp... 184 4e-45
CP000910_3013(CP000910|pid:none) Renibacterium salmoninarum ATCC... 184 4e-45
CP000826_37(CP000826|pid:none) Serratia proteamaculans 568, comp... 184 5e-45
AM180088_354(AM180088|pid:none) Haloquadratum walsbyi DSM 16790 ... 184 5e-45
CP000849_941(CP000849|pid:none) Rickettsia bellii OSU 85-389, co... 184 5e-45
CP001032_1143(CP001032|pid:none) Opitutus terrae PB90-1, complet... 184 5e-45
CR936257_537(CR936257|pid:none) Natronomonas pharaonis DSM 2160 ... 183 7e-45
CP001341_1225(CP001341|pid:none) Arthrobacter chlorophenolicus A... 183 7e-45
BA000002_987(BA000002|pid:none) Aeropyrum pernix K1 DNA, complet... 183 7e-45
CP000605_1497(CP000605|pid:none) Bifidobacterium longum DJO10A, ... 183 9e-45
CP000139_3765(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 183 9e-45
CP001103_773(CP001103|pid:none) Alteromonas macleodii 'Deep ecot... 183 9e-45
CP000264_1660(CP000264|pid:none) Jannaschia sp. CCS1, complete g... 182 1e-44
AG0496(AG0496) threonine ammonia-lyase (EC 4.3.1.19) [imported] ... 182 1e-44
AE009952_4051(AE009952|pid:none) Yersinia pestis KIM, complete g... 182 1e-44
CP000613_3098(CP000613|pid:none) Rhodospirillum centenum SW, com... 182 1e-44
CP000667_4051(CP000667|pid:none) Salinispora tropica CNB-440, co... 182 1e-44
CP000301_1430(CP000301|pid:none) Rhodopseudomonas palustris BisB... 182 1e-44
CP001131_3499(CP001131|pid:none) Anaeromyxobacter sp. K, complet... 182 1e-44
CP000950_8(CP000950|pid:none) Yersinia pseudotuberculosis YPIII,... 182 2e-44
CP000463_1456(CP000463|pid:none) Rhodopseudomonas palustris BisA... 182 2e-44
CP000561_1637(CP000561|pid:none) Pyrobaculum calidifontis JCM 11... 181 3e-44
AP008957_4264(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 181 3e-44
AM180088_793(AM180088|pid:none) Haloquadratum walsbyi DSM 16790 ... 181 3e-44
CP000850_4363(CP000850|pid:none) Salinispora arenicola CNS-205, ... 181 3e-44
CP000157_326(CP000157|pid:none) Erythrobacter litoralis HTCC2594... 181 4e-44
CP001089_469(CP001089|pid:none) Geobacter lovleyi SZ, complete g... 181 4e-44
CP000356_1828(CP000356|pid:none) Sphingopyxis alaskensis RB2256,... 181 4e-44
CP000512_136(CP000512|pid:none) Acidovorax citrulli AAC00-1, com... 180 6e-44
CP000384_2716(CP000384|pid:none) Mycobacterium sp. MCS, complete... 180 6e-44
AE017125_896(AE017125|pid:none) Helicobacter hepaticus ATCC 5144... 180 8e-44
CP000449_1585(CP000449|pid:none) Maricaulis maris MCS10, complet... 180 8e-44
AY596297_2226(AY596297|pid:none) Haloarcula marismortui ATCC 430... 179 1e-43
CP000927_4917(CP000927|pid:none) Caulobacter sp. K31, complete g... 179 1e-43
CP001337_43(CP001337|pid:none) Chloroflexus aggregans DSM 9485, ... 179 1e-43
CP000474_1233(CP000474|pid:none) Arthrobacter aurescens TC1, com... 179 1e-43
AP009152_1772(AP009152|pid:none) Kocuria rhizophila DC2201 DNA, ... 179 2e-43
CP000159_2233(CP000159|pid:none) Salinibacter ruber DSM 13855, c... 179 2e-43
CP000362_3658(CP000362|pid:none) Roseobacter denitrificans OCh 1... 179 2e-43
CP000660_1470(CP000660|pid:none) Pyrobaculum arsenaticum DSM 135... 179 2e-43
BX572605_259(BX572605|pid:none) Rhodopseudomonas palustris CGA00... 179 2e-43
BA000030_3308(BA000030|pid:none) Streptomyces avermitilis MA-468... 178 2e-43
CP000511_2974(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1... 178 2e-43
CP000853_825(CP000853|pid:none) Alkaliphilus oremlandii OhILAs, ... 178 2e-43
CP000699_2380(CP000699|pid:none) Sphingomonas wittichii RW1, com... 177 4e-43
A87700(A87700) threonine dehydratase [imported] - Caulobacter cr... 177 4e-43
CP000656_3282(CP000656|pid:none) Mycobacterium gilvum PYR-GCK, c... 177 4e-43
CP000283_1629(CP000283|pid:none) Rhodopseudomonas palustris BisB... 177 4e-43
CP000478_730(CP000478|pid:none) Syntrophobacter fumaroxidans MPO... 177 5e-43
CP000388_3933(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 177 5e-43
CP000661_2222(CP000661|pid:none) Rhodobacter sphaeroides ATCC 17... 177 5e-43
AM902716_1620(AM902716|pid:none) Bordetella petrii strain DSM 12... 176 8e-43
CP001096_4422(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 176 8e-43
CP000683_464(CP000683|pid:none) Rickettsia massiliae MTU5, compl... 176 1e-42
AE006914_628(AE006914|pid:none) Rickettsia conorii str. Malish 7... 175 2e-42
CP000766_675(CP000766|pid:none) Rickettsia rickettsii str. Iowa,... 175 2e-42
CP000847_631(CP000847|pid:none) Rickettsia akari str. Hartford, ... 175 2e-42
CP000769_3517(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 175 2e-42
CP001612_504(CP001612|pid:none) Rickettsia africae ESF-5, comple... 175 2e-42
CP000142_3167(CP000142|pid:none) Pelobacter carbinolicus DSM 238... 175 2e-42
CP000749_4088(CP000749|pid:none) Marinomonas sp. MWYL1, complete... 175 2e-42
CP000053_691(CP000053|pid:none) Rickettsia felis URRWXCal2, comp... 175 2e-42
EF107099_46(EF107099|pid:none) Uncultured marine bacterium EB0_4... 174 3e-42
CP000724_524(CP000724|pid:none) Alkaliphilus metalliredigens QYM... 174 3e-42
AP009493_2568(AP009493|pid:none) Streptomyces griseus subsp. gri... 174 4e-42
AJ235271_218(AJ235271|pid:none) Rickettsia prowazekii strain Mad... 174 5e-42
CP001349_7258(CP001349|pid:none) Methylobacterium nodulans ORS 2... 174 5e-42
AP009153_1242(AP009153|pid:none) Gemmatimonas aurantiaca T-27 DN... 174 5e-42
(O94634) RecName: Full=Threonine dehydratase, mitochondrial; ... 173 7e-42
CP000510_3154(CP000510|pid:none) Psychromonas ingrahamii 37, com... 172 2e-41
CU234118_4813(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 172 2e-41
CP000850_847(CP000850|pid:none) Salinispora arenicola CNS-205, c... 172 2e-41
CP000949_2660(CP000949|pid:none) Pseudomonas putida W619, comple... 172 2e-41
BX842648_293(BX842648|pid:none) Bdellovibrio bacteriovorus compl... 172 2e-41
CP000830_2686(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ... 172 2e-41
BA000040_5902(BA000040|pid:none) Bradyrhizobium japonicum USDA 1... 171 3e-41
CP000494_3748(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 171 3e-41
CP000697_899(CP000697|pid:none) Acidiphilium cryptum JF-5, compl... 171 3e-41
CP000712_2483(CP000712|pid:none) Pseudomonas putida F1, complete... 171 4e-41
CP000804_730(CP000804|pid:none) Roseiflexus castenholzii DSM 139... 171 4e-41
CT573326_4651(CT573326|pid:none) Pseudomonas entomophila str. L4... 171 5e-41
CU234118_3366(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl... 171 5e-41
CP000686_4295(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 170 6e-41
CP000667_914(CP000667|pid:none) Salinispora tropica CNB-440, com... 170 8e-41
BA000022_828(BA000022|pid:none) Synechocystis sp. PCC 6803 DNA, ... 170 8e-41
CP000943_6493(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 169 1e-40
CP000230_2869(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117... 169 1e-40
CP000615_1802(CP000615|pid:none) Burkholderia vietnamiensis G4 c... 169 1e-40
BA000012_5619(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 169 2e-40
EU686636_15(EU686636|pid:none) Uncultured marine group III eurya... 169 2e-40
CP001618_1069(CP001618|pid:none) Beutenbergia cavernae DSM 12333... 168 2e-40
CP000767_830(CP000767|pid:none) Campylobacter curvus 525.92, com... 168 2e-40
CP000744_422(CP000744|pid:none) Pseudomonas aeruginosa PA7, comp... 168 2e-40
AE004091_332(AE004091|pid:none) Pseudomonas aeruginosa PAO1, com... 168 2e-40
CP000555_3761(CP000555|pid:none) Methylibium petroleiphilum PM1,... 168 2e-40
CP000438_346(CP000438|pid:none) Pseudomonas aeruginosa UCBPP-PA1... 168 3e-40
BA000012_5998(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 167 4e-40
CP001032_957(CP001032|pid:none) Opitutus terrae PB90-1, complete... 167 4e-40
AM502224_76(AM502224|pid:none) Leishmania infantum chromosome 6. 167 5e-40
AM420293_883(AM420293|pid:none) Saccharopolyspora erythraea NRRL... 167 5e-40
AE015451_3165(AE015451|pid:none) Pseudomonas putida KT2440 compl... 167 5e-40
CT005245_76(CT005245|pid:none) Leishmania major strain Friedlin,... 167 5e-40
(Q9CKJ2) RecName: Full=Threonine dehydratase biosynthetic; ... 167 7e-40
AY426768_10(AY426768|pid:none) Streptomyces clavuligerus putativ... 167 7e-40
AP008981_1629(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 166 9e-40
CP000248_1096(CP000248|pid:none) Novosphingobium aromaticivorans... 166 9e-40
CP000494_5216(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl... 166 9e-40
CP000285_317(CP000285|pid:none) Chromohalobacter salexigens DSM ... 166 9e-40
CP000094_5376(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 166 9e-40
(P55664) RecName: Full=Putative threonine dehydratase; ... 166 1e-39
CP000680_4193(CP000680|pid:none) Pseudomonas mendocina ymp, comp... 166 1e-39
CP000285_20(CP000285|pid:none) Chromohalobacter salexigens DSM 3... 165 2e-39
CP000453_85(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-1,... 165 2e-39
CP000875_948(CP000875|pid:none) Herpetosiphon aurantiacus ATCC 2... 165 2e-39
BX640448_278(BX640448|pid:none) Bordetella bronchiseptica strain... 165 3e-39
CP001275_5(CP001275|pid:none) Thermomicrobium roseum DSM 5159, c... 164 3e-39
CP000764_1390(CP000764|pid:none) Bacillus cereus subsp. cytotoxi... 164 4e-39
AP008957_1970(AP008957|pid:none) Rhodococcus erythropolis PR4 DN... 164 4e-39
CP000585_272(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 164 6e-39
EU155151_6(EU155151|pid:none) Chromohalobacter sp. HS2 LysR-type... 163 7e-39
M61914_1(M61914|pid:none) L.esculentum threonine deaminase (Td) ... 163 1e-38
CP000569_1431(CP000569|pid:none) Actinobacillus pleuropneumoniae... 162 1e-38
CP000057_788(CP000057|pid:none) Haemophilus influenzae 86-028NP,... 162 2e-38
AE016827_2218(AE016827|pid:none) Mannheimia succiniciproducens M... 162 2e-38
AP009384_1193(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 162 2e-38
CP001620_1200(CP001620|pid:none) Corynebacterium kroppenstedtii ... 162 2e-38
CP000947_49(CP000947|pid:none) Haemophilus somnus 2336, complete... 162 2e-38
CP000388_4215(CP000388|pid:none) Pseudoalteromonas atlantica T6c... 162 2e-38
AP009384_2299(AP009384|pid:none) Azorhizobium caulinodans ORS 57... 162 2e-38
CP000075_1671(CP000075|pid:none) Pseudomonas syringae pv. syring... 161 3e-38
(Q3V7T5) RecName: Full=Threonine dehydratase biosynthetic; ... 161 4e-38
CP001103_3986(CP001103|pid:none) Alteromonas macleodii 'Deep eco... 160 5e-38
CP001189_2957(CP001189|pid:none) Gluconacetobacter diazotrophicu... 160 5e-38
CP001321_959(CP001321|pid:none) Haemophilus parasuis SH0165, com... 160 5e-38
AE016853_5162(AE016853|pid:none) Pseudomonas syringae pv. tomato... 160 5e-38
CP001186_1683(CP001186|pid:none) Bacillus cereus G9842, complete... 160 6e-38
(P46493) RecName: Full=Threonine dehydratase biosynthetic; ... 160 8e-38
CP000514_3399(CP000514|pid:none) Marinobacter aquaeolei VT8, com... 160 8e-38
CP000712_4997(CP000712|pid:none) Pseudomonas putida F1, complete... 159 1e-37
CP000926_5168(CP000926|pid:none) Pseudomonas putida GB-1, comple... 159 1e-37
CP000471_3603(CP000471|pid:none) Magnetococcus sp. MC-1, complet... 159 1e-37
AM889285_3341(AM889285|pid:none) Gluconacetobacter diazotrophicu... 159 1e-37
CP000606_292(CP000606|pid:none) Shewanella loihica PV-4, complet... 159 1e-37
CP001115_103(CP001115|pid:none) Deinococcus deserti VCD115 plasm... 159 2e-37
BX251412_123(BX251412|pid:none) Tropheryma whipplei TW08/27, com... 159 2e-37
CP001337_1235(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 159 2e-37
CR931997_1313(CR931997|pid:none) Corynebacterium jeikeium K411 c... 158 2e-37
AL954747_701(AL954747|pid:none) Nitrosomonas europaea ATCC 19718... 158 2e-37
CP000949_316(CP000949|pid:none) Pseudomonas putida W619, complet... 158 2e-37
(Q7A4H2) RecName: Full=Threonine dehydratase biosynthetic; ... 158 2e-37
(Q3V7T4) RecName: Full=Threonine dehydratase biosynthetic; ... 158 2e-37
EF030839_1(EF030839|pid:none) Lactobacillus paracasei strain 119... 158 3e-37
AE016877_1645(AE016877|pid:none) Bacillus cereus ATCC 14579, com... 158 3e-37
CP000115_2240(CP000115|pid:none) Nitrobacter winogradskyi Nb-255... 158 3e-37
AL604066_11(AL604066|pid:none) Mouse DNA sequence from clone RP2... 158 3e-37
CP000058_4659(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 158 3e-37
CP000554_1526(CP000554|pid:none) Prochlorococcus marinus str. MI... 157 4e-37
CP000058_1597(CP000058|pid:none) Pseudomonas syringae pv. phaseo... 157 4e-37
AE000513_553(AE000513|pid:none) Deinococcus radiodurans R1 chrom... 157 4e-37
CR555306_1956(CR555306|pid:none) Azoarcus sp. EbN1 complete geno... 157 4e-37
CP001176_1718(CP001176|pid:none) Bacillus cereus B4264, complete... 157 5e-37
FN392319_1017(FN392319|pid:none) Pichia pastoris GS115 chromosom... 157 5e-37
CP000909_1219(CP000909|pid:none) Chloroflexus aurantiacus J-10-f... 157 5e-37
CP000903_1681(CP000903|pid:none) Bacillus weihenstephanensis KBA... 157 5e-37
CP001358_1740(CP001358|pid:none) Desulfovibrio desulfuricans sub... 157 7e-37
CP001283_1803(CP001283|pid:none) Bacillus cereus AH820, complete... 157 7e-37
AC090882_29(AC090882|pid:none) Oryza sativa chromosome 3 BAC OSJ... 157 7e-37
CP000934_239(CP000934|pid:none) Cellvibrio japonicus Ueda107, co... 156 9e-37
CP000127_2565(CP000127|pid:none) Nitrosococcus oceani ATCC 19707... 156 9e-37
AJ007788_2(AJ007788|pid:none) Bacillus cereus ilvD (partial), il... 156 9e-37
AF229927_1(AF229927|pid:none) Nicotiana attenuata threonine deam... 156 9e-37
AY653041_1(AY653041|pid:none) Synthetic construct threonine dehy... 156 9e-37
AY653042_1(AY653042|pid:none) Synthetic construct threonine dehy... 156 9e-37
(Q9ZSS6) RecName: Full=Threonine dehydratase biosynthetic, chlor... 156 9e-37
AF177212_1(AF177212|pid:none) Arabidopsis thaliana threonine deh... 156 9e-37
CP001027_257(CP001027|pid:none) Burkholderia ambifaria MC40-6 ch... 156 1e-36
CP000001_1646(CP000001|pid:none) Bacillus cereus E33L, complete ... 156 1e-36
AE003852_27(AE003852|pid:none) Vibrio cholerae O1 biovar eltor s... 155 2e-36
CP000644_105(CP000644|pid:none) Aeromonas salmonicida subsp. sal... 155 2e-36
AE014297_938(AE014297|pid:none) Drosophila melanogaster chromoso... 155 2e-36
CP000383_205(CP000383|pid:none) Cytophaga hutchinsonii ATCC 3340... 155 2e-36
AE017194_1926(AE017194|pid:none) Bacillus cereus ATCC 10987, com... 155 2e-36
CP000442_442(CP000442|pid:none) Burkholderia ambifaria AMMD chro... 155 3e-36
CT978603_1391(CT978603|pid:none) Synechococcus sp. RCC307 genomi... 155 3e-36
CP000284_128(CP000284|pid:none) Methylobacillus flagellatus KT, ... 154 3e-36
CP001192_1068(CP001192|pid:none) Rhizobium leguminosarum bv. tri... 154 3e-36
CP000503_3703(CP000503|pid:none) Shewanella sp. W3-18-1, complet... 154 3e-36
CP000481_1884(CP000481|pid:none) Acidothermus cellulolyticus 11B... 154 3e-36
CU207366_2083(CU207366|pid:none) Gramella forsetii KT0803 comple... 154 3e-36
CU459003_2752(CU459003|pid:none) Magnetospirillum gryphiswaldens... 154 3e-36
CP000282_3376(CP000282|pid:none) Saccharophagus degradans 2-40, ... 154 3e-36
EF026088_1(EF026088|pid:none) Solanum lycopersicum chloroplast t... 154 4e-36
CP000851_348(CP000851|pid:none) Shewanella pealeana ATCC 700345,... 154 4e-36
AM942444_732(AM942444|pid:none) Corynebacterium urealyticum DSM ... 154 4e-36
CP000739_119(CP000739|pid:none) Sinorhizobium medicae WSM419 pla... 154 4e-36
BT002523_1(BT002523|pid:none) Arabidopsis thaliana threonine deh... 154 4e-36
BX548174_1035(BX548174|pid:none) Prochlorococcus marinus MED4 co... 154 4e-36
CP000781_4256(CP000781|pid:none) Xanthobacter autotrophicus Py2,... 154 4e-36
AE016795_971(AE016795|pid:none) Vibrio vulnificus CMCP6 chromoso... 154 6e-36
CP000951_1588(CP000951|pid:none) Synechococcus sp. PCC 7002, com... 154 6e-36
CP001144_3889(CP001144|pid:none) Salmonella enterica subsp. ente... 153 8e-36
AM398681_437(AM398681|pid:none) Flavobacterium psychrophilum JIP... 153 8e-36
CU928174_114(CU928174|pid:none) Zygosaccharomyces rouxii strain ... 153 8e-36
CU207211_2706(CU207211|pid:none) Herminiimonas arsenicoxydans ch... 153 1e-35
AE014299_4225(AE014299|pid:none) Shewanella oneidensis MR-1, com... 153 1e-35
CP000446_363(CP000446|pid:none) Shewanella sp. MR-4, complete ge... 153 1e-35
CP000891_4103(CP000891|pid:none) Shewanella baltica OS195, compl... 153 1e-35
CP001177_1801(CP001177|pid:none) Bacillus cereus AH187, complete... 153 1e-35
CP000563_3957(CP000563|pid:none) Shewanella baltica OS155, compl... 153 1e-35
CP000444_3635(CP000444|pid:none) Shewanella sp. MR-7, complete g... 153 1e-35
CP000553_966(CP000553|pid:none) Prochlorococcus marinus str. NAT... 153 1e-35
(O42615) RecName: Full=Threonine dehydratase, mitochondrial; ... 152 1e-35
AE015451_4373(AE015451|pid:none) Pseudomonas putida KT2440 compl... 152 1e-35
CP000878_852(CP000878|pid:none) Prochlorococcus marinus str. MIT... 152 1e-35
CP000614_1848(CP000614|pid:none) Burkholderia vietnamiensis G4 c... 152 2e-35
CP000964_5278(CP000964|pid:none) Klebsiella pneumoniae 342, comp... 152 2e-35
CP000513_303(CP000513|pid:none) Dichelobacter nodosus VCS1703A, ... 152 2e-35
AM933172_3696(AM933172|pid:none) Salmonella enterica subsp. ente... 152 2e-35
(P20506) RecName: Full=Threonine dehydratase biosynthetic; ... 152 2e-35
AB0924(AB0924) threonine ammonia-lyase (EC 4.3.1.19) [similarity... 152 2e-35
CP000647_4219(CP000647|pid:none) Klebsiella pneumoniae subsp. pn... 152 2e-35
AP006725_119(AP006725|pid:none) Klebsiella pneumoniae NTUH-K2044... 152 2e-35
CP000109_1562(CP000109|pid:none) Thiomicrospira crunogena XCL-2,... 152 2e-35
CP000089_4090(CP000089|pid:none) Dechloromonas aromatica RCB, co... 152 2e-35
AM902716_4907(AM902716|pid:none) Bordetella petrii strain DSM 12... 152 2e-35
CP001138_3854(CP001138|pid:none) Salmonella enterica subsp. ente... 151 3e-35
CP000560_1906(CP000560|pid:none) Bacillus amyloliquefaciens FZB4... 151 3e-35
CP000744_4022(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 151 3e-35
CP000746_413(CP000746|pid:none) Actinobacillus succinogenes 130Z... 151 3e-35
CP000157_943(CP000157|pid:none) Erythrobacter litoralis HTCC2594... 151 4e-35
CP000319_2541(CP000319|pid:none) Nitrobacter hamburgensis X14, c... 151 4e-35
CP000269_3116(CP000269|pid:none) Janthinobacterium sp. Marseille... 151 4e-35
CP000817_898(CP000817|pid:none) Lysinibacillus sphaericus C3-41,... 150 5e-35
CP000117_674(CP000117|pid:none) Anabaena variabilis ATCC 29413, ... 150 5e-35
BX640440_304(BX640440|pid:none) Bordetella bronchiseptica strain... 150 5e-35
CP000931_3904(CP000931|pid:none) Shewanella halifaxensis HAW-EB4... 150 6e-35
CP000662_36(CP000662|pid:none) Rhodobacter sphaeroides ATCC 1702... 150 6e-35
DWEBTT(JT0278) threonine ammonia-lyase (EC 4.3.1.19), biosynthet... 150 6e-35
CP000725_523(CP000725|pid:none) Streptococcus gordonii str. Chal... 150 6e-35
CR382125_859(CR382125|pid:none) Kluyveromyces lactis strain NRRL... 150 6e-35
CU928162_4340(CU928162|pid:none) Escherichia coli ED1a chromosom... 150 6e-35
CP000247_3931(CP000247|pid:none) Escherichia coli 536, complete ... 150 6e-35
CU928163_4205(CU928163|pid:none) Escherichia coli UMN026 chromos... 150 8e-35
M87049_11(M87049|pid:none) E. coli genomic sequence of the regio... 150 8e-35
CP000802_3780(CP000802|pid:none) Escherichia coli HS, complete g... 150 8e-35
CU928164_2995(CU928164|pid:none) Escherichia coli IAI39 chromoso... 150 8e-35
CP000243_4239(CP000243|pid:none) Escherichia coli UTI89, complet... 150 8e-35
AE005674_3849(AE005674|pid:none) Shigella flexneri 2a str. 301, ... 150 8e-35
CP001037_729(CP001037|pid:none) Nostoc punctiforme PCC 73102, co... 150 8e-35
(P04968) RecName: Full=Threonine dehydratase biosynthetic; ... 150 8e-35
CP000946_4138(CP000946|pid:none) Escherichia coli ATCC 8739, com... 150 8e-35
CP000468_3740(CP000468|pid:none) Escherichia coli APEC O1, compl... 150 8e-35
AC024805_6(AC024805|pid:none) Caenorhabditis elegans cosmid Y51H... 149 1e-34
CU468135_188(CU468135|pid:none) Erwinia tasmaniensis strain ET1/... 149 1e-34
CP000473_2290(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 149 1e-34
CP001175_559(CP001175|pid:none) Listeria monocytogenes HCC23, co... 149 2e-34
CP000435_1378(CP000435|pid:none) Synechococcus sp. CC9311, compl... 149 2e-34
CP000744_4333(CP000744|pid:none) Pseudomonas aeruginosa PA7, com... 149 2e-34
CR378674_178(CR378674|pid:none) Photobacterium profundum SS9; se... 149 2e-34
EF678311_1(EF678311|pid:none) Picea sitchensis clone WS02913_P07... 148 2e-34
AL591985_421(AL591985|pid:none) Sinorhizobium meliloti 1021 plas... 148 2e-34
CP000489_282(CP000489|pid:none) Paracoccus denitrificans PD1222 ... 148 2e-34
AG1323(AG1323) threonine dehydratase homolog ilvA [imported] - L... 148 2e-34
(Q02145) RecName: Full=Threonine dehydratase biosynthetic; ... 148 2e-34
CS024085_1(CS024085|pid:none) Sequence 7 from Patent WO200501484... 148 2e-34
U92974_23(U92974|pid:none) Lactococcus lactis unknown gene, part... 148 2e-34
BX571965_2122(BX571965|pid:none) Burkholderia pseudomallei strai... 148 2e-34
EF678401_1(EF678401|pid:none) Picea sitchensis clone WS02919_O03... 148 2e-34
CP000815_160(CP000815|pid:none) Paulinella chromatophora chromat... 148 3e-34
AE005174_4733(AE005174|pid:none) Escherichia coli O157:H7 EDL933... 148 3e-34
AH1694(AH1694) threonine dehydratase homolog ilvA [imported] - L... 148 3e-34
CP000922_1435(CP000922|pid:none) Anoxybacillus flavithermus WK1,... 148 3e-34
CT971583_1222(CT971583|pid:none) Synechococcus WH7803 complete g... 147 4e-34
CP000450_1122(CP000450|pid:none) Nitrosomonas eutropha C91, comp... 147 4e-34
CP000380_644(CP000380|pid:none) Burkholderia cenocepacia AU 1054... 147 4e-34
AC116977_71(AC116977|pid:none) Dictyostelium discoideum chromoso... 147 5e-34
CP000961_443(CP000961|pid:none) Shewanella woodyi ATCC 51908, co... 147 5e-34
CP000712_2280(CP000712|pid:none) Pseudomonas putida F1, complete... 147 5e-34
CP000852_125(CP000852|pid:none) Caldivirga maquilingensis IC-167... 147 5e-34
AM295250_1557(AM295250|pid:none) Staphylococcus carnosus subsp. ... 147 5e-34
CP000576_952(CP000576|pid:none) Prochlorococcus marinus str. MIT... 147 5e-34
CU928166_196(CU928166|pid:none) Kluyveromyces thermotolerans str... 147 5e-34
AM747722_25(AM747722|pid:none) Burkholderia cenocepacia J2315 ch... 147 7e-34
CP000542_2106(CP000542|pid:none) Verminephrobacter eiseniae EF01... 147 7e-34
CP000440_1926(CP000440|pid:none) Burkholderia ambifaria AMMD chr... 147 7e-34
BX950851_4198(BX950851|pid:none) Erwinia carotovora subsp. atros... 147 7e-34
CP000551_950(CP000551|pid:none) Prochlorococcus marinus str. AS9... 147 7e-34
CP000270_2117(CP000270|pid:none) Burkholderia xenovorans LB400 c... 146 1e-33
AP008955_994(AP008955|pid:none) Brevibacillus brevis NBRC 100599... 146 1e-33
BX640426_125(BX640426|pid:none) Bordetella parapertussis strain ... 146 1e-33
AM747720_2014(AM747720|pid:none) Burkholderia cenocepacia J2315 ... 146 1e-33
BA000012_2703(BA000012|pid:none) Mesorhizobium loti MAFF303099 D... 146 1e-33
CP000227_1754(CP000227|pid:none) Bacillus cereus Q1, complete ge... 146 1e-33
AE015451_3414(AE015451|pid:none) Pseudomonas putida KT2440 compl... 146 1e-33
AM263198_2010(AM263198|pid:none) Listeria welshimeri serovar 6b ... 145 2e-33
CP000686_1914(CP000686|pid:none) Roseiflexus sp. RS-1, complete ... 145 2e-33
CP000094_2617(CP000094|pid:none) Pseudomonas fluorescens Pf0-1, ... 145 2e-33
CP001349_5046(CP001349|pid:none) Methylobacterium nodulans ORS 2... 145 2e-33
GN098526_1(GN098526|pid:none) Sequence 3307 from Patent WO200903... 145 2e-33
CP000086_2049(CP000086|pid:none) Burkholderia thailandensis E264... 145 2e-33
C72630(C72630)probable threonine dehydratase APE1498 - Aeropyrum... 145 3e-33
(P66897) RecName: Full=Probable threonine dehydratase biosynthet... 145 3e-33
CP000023_145(CP000023|pid:none) Streptococcus thermophilus LMG 1... 144 4e-33
CP000949_2915(CP000949|pid:none) Pseudomonas putida W619, comple... 144 5e-33
AE016816_436(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 144 5e-33
CP001298_3123(CP001298|pid:none) Methylobacterium chloromethanic... 144 6e-33
CP000908_2992(CP000908|pid:none) Methylobacterium extorquens PA1... 144 6e-33
CP000943_3105(CP000943|pid:none) Methylobacterium sp. 4-46, comp... 144 6e-33
BX571874_222(BX571874|pid:none) Photorhabdus luminescens subsp. ... 143 8e-33
CR954246_2702(CR954246|pid:none) Pseudoalteromonas haloplanktis ... 143 8e-33
K03503_2(K03503|pid:none) E.coli ilvA gene encoding threonine de... 143 8e-33
CP000116_2363(CP000116|pid:none) Thiobacillus denitrificans ATCC... 143 1e-32
(Q9X7F1) RecName: Full=Probable threonine dehydratase biosynthet... 143 1e-32
CP001281_673(CP001281|pid:none) Thauera sp. MZ1T, complete genome. 142 1e-32
A98146(A98146) probable threonin dehydratase (threonin deaminase... 142 2e-32
A69644(A69644) threonine ammonia-lyase (EC 4.3.1.19) ilvA [simil... 142 2e-32
AM942759_3273(AM942759|pid:none) Proteus mirabilis strain HI4320... 142 2e-32
CP000828_4351(CP000828|pid:none) Acaryochloris marina MBIC11017,... 142 2e-32
CT573326_2737(CT573326|pid:none) Pseudomonas entomophila str. L4... 142 2e-32
CP000616_10(CP000616|pid:none) Burkholderia vietnamiensis G4 chr... 141 4e-32
CP000352_354(CP000352|pid:none) Ralstonia metallidurans CH34, co... 141 4e-32
AM270071_79(AM270071|pid:none) Aspergillus niger contig An04c010... 141 4e-32
CP000353_1974(CP000353|pid:none) Ralstonia metallidurans CH34 me... 141 4e-32
AY132362_1(AY132362|pid:none) Spironucleus barkhanus threonine d... 141 4e-32

>(A0JNI4) RecName: Full=Serine racemase; EC=5.1.1.18;
&BC126700_1(BC126700|pid:none)
Length = 334

Score = 298 bits (764), Expect = 1e-79
Identities = 151/312 (48%), Positives = 216/312 (69%), Gaps = 3/312 (0%)
Frame = +2

Query: 41 VTLKDIKEAHKRIEKYIHKTPVLTNSTINELAGKELYFKCENLQKTGSFKMRGACNAI-- 214
++ D+++AH I +IH TPVLT+S +N++ G+ L+FKCE QKTGSFK+RGA NAI
Sbjct: 7 ISFADVEKAHINIRDFIHLTPVLTSSILNQITGRNLFFKCELFQKTGSFKIRGALNAIRG 66

Query: 215 -FSLDEEELSKGVVTHSSGNHGQALSYASKVRCVKCYVVVPEDAPSVKLNAICGYGATVT 391
S EE + VV HSSGNHGQALS+A+++ + YV+VPE AP+ K AI YGA++
Sbjct: 67 LISAHPEEKPRAVVAHSSGNHGQALSFAARLEGIPAYVIVPETAPNCKKLAIQAYGASIV 126

Query: 392 KCKATLEARESNTKQLIEQHSCKLIHPFDNLQVIAGQGTASLELMEQVENLDAIITPVGG 571
+ + E+RE+ TK++ E+ ++HP VIAGQGT ++E++ QV +DA++ PVGG
Sbjct: 127 YSEQSEESRENITKRIAEETEGIMVHPNQEPAVIAGQGTIAMEVLNQVPLVDALVVPVGG 186

Query: 572 GGLLSGTCITAKSLNPNIKVFAAEPLGADDTYRSLLSGEIQKHTPGKPNTIADGLLTTVG 751
GG+L+G +T K+L P++KV+AAEPL ADD Y+S L GE+ + P P TIADG+ +++G
Sbjct: 187 GGMLAGIAVTVKALRPSVKVYAAEPLNADDCYQSKLKGELTPN-PYPPETIADGIKSSIG 245

Query: 752 SLTFPIIKENCDGVILVTEDEIKYAMKLVWERMKIIIEPSSATTLAAILKQEFKDKKGY* 931
T+PII++ D V VTEDEIKYA +LVWERMK++IEP++ +A +L Q F+
Sbjct: 246 LNTWPIIRDLVDDVFTVTEDEIKYATQLVWERMKLLIEPTAGVGVAVVLSQHFRTVPAEV 305

Query: 932 KSRYYNLLAGNV 967
K+ L GNV
Sbjct: 306 KNICIVLSGGNV 317

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,397,971,082
Number of extensions: 26251397
Number of successful extensions: 78802
Number of sequences better than 10.0: 2025
Number of HSP's gapped: 76948
Number of HSP's successfully gapped: 2029
Length of query: 329
Length of database: 1,040,966,779
Length adjustment: 129
Effective length of query: 200
Effective length of database: 627,614,014
Effective search space: 125522802800
Effective search space used: 125522802800
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.79 gvh: 0.34 alm: 0.37 top: 0.53 tms: 0.00 mit: 0.19 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.40 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

36.0 %: cytoplasmic
36.0 %: nuclear
12.0 %: cytoskeletal
8.0 %: vacuolar
4.0 %: mitochondrial
4.0 %: peroxisomal

>> prediction for Contig-U06181-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0