Contig-U06144-1
Contig ID Contig-U06144-1
Contig update 2001. 8.30
Contig sequence
>Contig-U06144-1 (Contig-U06144-1Q) /CSM_Contig/Contig-U06144-1Q.Seq.d
TGGCCTACTGGAAAAAACTTCACACTTCACGCTCTAATAATAATATATCA
TACAATACTTTTTAAAAAATAAAATAAAAAAAGAAAAATGCAAGCTAAAT
TTGAAGAATTTTTTCAAAAAGTTAAAAATCAAACAACTTATGATGAAGAA
GAATTATTTAAATTAGTTGAATTATCAAAAGTTACCCAAGAGGATAAAAA
AGAAAAAGTTGCAAATTTTGCAAATATTTTATTTAAATTAACAAAATCAA
CACCATCAGATTCAATAAATGCAACTATCATCAAACAAGTCAATGATGAT
GCTCGAAAATATATTGATGAAGTTGGCGATGATGTTAATGTTAGTTTTAC
AATTGCTTTAATTTTCGTTACAATTATACAATTATTTAAACAAGATGCAA
GTATTAATTCACTCCTTAATAATGCATCAACAATTTTAGTAAATATCCTT
TATAAACAAGGTAATCACATTGATTCAATGGATTTATTAATTGAAACTTT
TGAAATACTTTCAAAAAAAACAAATGATGAAAATAAAAGAATGTATTATG
TATCAAGAAGTAATGAAATTGCTCGTTATAAATCTGATTTCCAATCTGGT
AAACAAGTTAAACTTTCACCAACATCATCAGAAAAACTTCAAAAAGCATT
TACCTATAAAGAAAAAGGTACTGATGCATTTAAAAAAAGTGATTGGAAAG
GTGCAATTTTTAATTATCATTGTGCAAATAATTATGTAACAGGATTAATG
GGGTTAGGAGATGAAGAAGATACAATTTCAAAGAATTTAGTATTAGTTTT
AACAAATAATATTGCAATTTGTAATATGAAATTAGGTAAATTCAAAAGAT
CAATCGAATTATTAGATCAAGTTTTAAAGAGTGATCCAAACAATGTCAAA
GCATTATATAGAAGAGGTAAATGTTTGGTAGCAGAGAAAGAATATATACA
TGCTGAAGAAGATTTAGAAAAAGCTCTAACTCTCACTCCAAATGATAAAG
AAATTATAGCTGAATTGAAAATTTGTAGACAAAAATCAAATGAATTCAAA
AAGGTTGAAGCAAAAGCTTATAGTAAAATGT

Gap no gap
Contig length 1081
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 3715237
End point 3716306
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U06144
List of clone(s)

est1=VFF619E,1,1082
Translated Amino Acid sequence
wptgknftlhaliiiyhtilfkk*NKKRKMQAKFEEFFQKVKNQTTYDEEELFKLVELSK
VTQEDKKEKVANFANILFKLTKSTPSDSINATIIKQVNDDARKYIDEVGDDVNVSFTIAL
IFVTIIQLFKQDASINSLLNNASTILVNILYKQGNHIDSMDLLIETFEILSKKTNDENKR
MYYVSRSNEIARYKSDFQSGKQVKLSPTSSEKLQKAFTYKEKGTDAFKKSDWKGAIFNYH
CANNYVTGLMGLGDEEDTISKNLVLVLTNNIAICNMKLGKFKRSIELLDQVLKSDPNNVK
ALYRRGKCLVAEKEYIHAEEDLEKALTLTPNDKEIIAELKICRQKSNEFKKVEAKAYSKM


Translated Amino Acid sequence (All Frames)
Frame A:
wptgknftlhaliiiyhtilfkk*NKKRKMQAKFEEFFQKVKNQTTYDEEELFKLVELSK
VTQEDKKEKVANFANILFKLTKSTPSDSINATIIKQVNDDARKYIDEVGDDVNVSFTIAL
IFVTIIQLFKQDASINSLLNNASTILVNILYKQGNHIDSMDLLIETFEILSKKTNDENKR
MYYVSRSNEIARYKSDFQSGKQVKLSPTSSEKLQKAFTYKEKGTDAFKKSDWKGAIFNYH
CANNYVTGLMGLGDEEDTISKNLVLVLTNNIAICNMKLGKFKRSIELLDQVLKSDPNNVK
ALYRRGKCLVAEKEYIHAEEDLEKALTLTPNDKEIIAELKICRQKSNEFKKVEAKAYSKM


Frame B:
gllektshftl***yiiqyflknkikkekcklnlknffkklkikqlmmkknyln*lnyqk
lpkrikkkklqilqifyln*qnqhhqiq*mqlssnksmmmlenilmklammlmlvlqll*
fslqlynylnkmqvlihslimhqqf**isfinkvitliqwiy*lkllkyfqkkqmmkike
cimyqevmkllvinlisnlvnklnfhqhhqknfkkhlpikkkvlmhlkkvigkvqfliii
vqiim*qd*wg*emkkiqfqri*y*f*qiilqfvi*n*vnskdqsny*ikf*rviqtmsk
hyieevnvw*qrkniymlkki*kkl*lslqmikkl*ln*kfvdknqmnskrlkqklivkc


Frame C:
aywkklhtsrsnnnisyntf*kik*kkknas*i*rifsks*ksnnl**rrii*is*iiks
yprg*krksckfckyfi*inkintirfnkcnyhqtsq**cskiy**swr*c*c*fyncfn
frynytii*trcky*ftp**cinnfskypl*tr*sh*fngfin*nf*ntfkknk**k*kn
vlcikk**ncsl*i*fpiw*ts*tftniirktsksiyl*rkry*ci*kk*lercnf*lsl
ck*lcnringvrr*rrynfkefsisfnk*ycnl*yeir*iqkinriirssfke*skqcqs
ii*kr*mfgsreriytc*rrfrkssnshsk**rnys*ienl*tkik*iqkg*sksl**n


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U06144-1 (Contig-U06144-1Q)
/CSM_Contig/Contig-U06144-1Q.Seq.d
(1081 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U06144-1 (Contig-U06144-1Q) /CSM_Contig/Conti... 1808 0.0
Contig-U14162-1 (Contig-U14162-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U10318-1 (Contig-U10318-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U01598-1 (Contig-U01598-1Q) /CSM_Contig/Conti... 40 0.005
Contig-U13176-1 (Contig-U13176-1Q) /CSM_Contig/Conti... 38 0.019
Contig-U13111-1 (Contig-U13111-1Q) /CSM_Contig/Conti... 38 0.019
Contig-U10782-1 (Contig-U10782-1Q) /CSM_Contig/Conti... 38 0.019
Contig-U10530-1 (Contig-U10530-1Q) /CSM_Contig/Conti... 38 0.019
Contig-U14170-1 (Contig-U14170-1Q) /CSM_Contig/Conti... 36 0.076
Contig-U13971-1 (Contig-U13971-1Q) /CSM_Contig/Conti... 36 0.076

>Contig-U06144-1 (Contig-U06144-1Q) /CSM_Contig/Contig-U06144-1Q.Seq.d
Length = 1081

Score = 1808 bits (912), Expect = 0.0
Identities = 966/993 (97%)
Strand = Plus / Plus


Query: 89 tgcaagctaaatttgaagaattttttcaaaaagttaaaaatcaaacaacttatgatgaag 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 tgcaagctaaatttgaagaattttttcaaaaagttaaaaatcaaacaacttatgatgaag 148


Query: 149 aagaattatttaaattagttgaattatcaaaagttacccaagaggatnnnnnnnnnnnng 208
||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 149 aagaattatttaaattagttgaattatcaaaagttacccaagaggataaaaaagaaaaag 208


Query: 209 ttgcaaattttgcaaatattttatttaaattaacaaaatcaacaccatcagattcaataa 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ttgcaaattttgcaaatattttatttaaattaacaaaatcaacaccatcagattcaataa 268


Query: 269 atgcaactatcatcaaacaagtcaatgatgatgctcgaaaatatattgatgaagttggcg 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 atgcaactatcatcaaacaagtcaatgatgatgctcgaaaatatattgatgaagttggcg 328


Query: 329 atgatgttaatgttagttttacaattgctttaattttcgttacaattatacaattattta 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atgatgttaatgttagttttacaattgctttaattttcgttacaattatacaattattta 388


Query: 389 aacaagatgcaagtattaattcactccttaataatgcatcaacaattttagtaaatatcc 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 aacaagatgcaagtattaattcactccttaataatgcatcaacaattttagtaaatatcc 448


Query: 449 tttataaacaaggtaatcacattgattcaatggatttattaattgaaacttttgaaatac 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tttataaacaaggtaatcacattgattcaatggatttattaattgaaacttttgaaatac 508


Query: 509 tttcnnnnnnnncaaatgatgaaaataaaagaatgtattatgtatcaagaagtaatgaaa 568
|||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tttcaaaaaaaacaaatgatgaaaataaaagaatgtattatgtatcaagaagtaatgaaa 568


Query: 569 ttgctcgttataaatctgatttccaatctggtaaacaagttaaactttcaccaacatcat 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttgctcgttataaatctgatttccaatctggtaaacaagttaaactttcaccaacatcat 628


Query: 629 cagaaaaacttcaaaaagcatttacctataaagaaaaaggtactgatgcatttnnnnnnn 688
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 cagaaaaacttcaaaaagcatttacctataaagaaaaaggtactgatgcatttaaaaaaa 688


Query: 689 gtgattggaaaggtgcaatttttaattatcattgtgcaaataattatgtaacaggattaa 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gtgattggaaaggtgcaatttttaattatcattgtgcaaataattatgtaacaggattaa 748


Query: 749 tggggttaggagatgaagaagatacaatttcaaagaatttagtattagttttaacaaata 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tggggttaggagatgaagaagatacaatttcaaagaatttagtattagttttaacaaata 808


Query: 809 atattgcaatttgtaatatgaaattaggtaaattcaaaagatcaatcgaattattagatc 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 atattgcaatttgtaatatgaaattaggtaaattcaaaagatcaatcgaattattagatc 868


Query: 869 aagttttaaagagtgatccaaacaatgtcaaagcattatatagaagaggtaaatgtttgg 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 aagttttaaagagtgatccaaacaatgtcaaagcattatatagaagaggtaaatgtttgg 928


Query: 929 tagcagagaaagaatatatacatgctgaagaagatttagaaaaagctctaactctcactc 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 929 tagcagagaaagaatatatacatgctgaagaagatttagaaaaagctctaactctcactc 988


Query: 989 caaatgataaagaaattatagctgaattgaaaatttgtagacaaaaatcaaatgaattca 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 caaatgataaagaaattatagctgaattgaaaatttgtagacaaaaatcaaatgaattca 1048


Query: 1049 aaaaggttgaagcaaaagcttatagtaaaatgt 1081
|||||||||||||||||||||||||||||||||
Sbjct: 1049 aaaaggttgaagcaaaagcttatagtaaaatgt 1081


Score = 125 bits (63), Expect = 1e-28
Identities = 63/63 (100%)
Strand = Plus / Plus


Query: 1 tggcctactggaaaaaacttcacacttcacgctctaataataatatatcatacaatactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggcctactggaaaaaacttcacacttcacgctctaataataatatatcatacaatactt 60


Query: 61 ttt 63
|||
Sbjct: 61 ttt 63


>Contig-U14162-1 (Contig-U14162-1Q) /CSM_Contig/Contig-U14162-1Q.Seq.d
Length = 1182

Score = 40.1 bits (20), Expect = 0.005
Identities = 23/24 (95%)
Strand = Plus / Minus


Query: 222 aaatattttatttaaattaacaaa 245
|||||||| |||||||||||||||
Sbjct: 53 aaatatttaatttaaattaacaaa 30


>Contig-U10318-1 (Contig-U10318-1Q) /CSM_Contig/Contig-U10318-1Q.Seq.d
Length = 1016

Score = 40.1 bits (20), Expect = 0.005
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 521 caaatgatgaaaataaaaga 540
||||||||||||||||||||
Sbjct: 936 caaatgatgaaaataaaaga 955


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 32,381
Number of Sequences: 6905
Number of extensions: 32381
Number of successful extensions: 3147
Number of sequences better than 10.0: 359
length of query: 1081
length of database: 5,674,871
effective HSP length: 16
effective length of query: 1065
effective length of database: 5,564,391
effective search space: 5926076415
effective search space used: 5926076415
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11. 7
Homology vs DNA
Query= Contig-U06144-1 (Contig-U06144-1Q) /CSM_Contig/Contig-U06144-1Q.Seq.d
(1081 letters)

Database: ddbj_A
92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(BJ428469) Dictyostelium discoideum cDNA clone:ddv12e06, 3' ... 779 0.0 3
(BJ410314) Dictyostelium discoideum cDNA clone:ddv12e06, 5' ... 605 0.0 4
(AE014817) Plasmodium falciparum 3D7 chromosome 14 section 2... 36 0.001 11
(CP000716) Thermosipho melanesiensis BI429, complete genome. 42 0.002 24
(CU459019) Zebrafish DNA sequence from clone CH1073-448D1 in... 50 0.020 3
(AC136702) Mus musculus chromosome 3, clone RP23-24N12, comp... 34 0.020 10
(CP000061) Aster yellows witches'-broom phytoplasma AYWB, co... 34 0.030 15
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 32 0.037 12
(BX248387) Zebrafish DNA sequence from clone CH211-231O6 in ... 46 0.042 3
(CT990489) S.lycopersicum DNA sequence from clone LE_HBa-20F... 44 0.060 5
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 36 0.064 13
(AP009180) Candidatus Carsonella ruddii PV DNA, complete gen... 40 0.079 8
(CP001056) Clostridium botulinum B str. Eklund 17B, complete... 40 0.13 18
(AL844509) Plasmodium falciparum chromosome 13. 36 0.13 16
(AC154852) Mus musculus BAC clone RP23-33B19 from 16, comple... 40 0.17 8
(CR925726) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 0.18 4
(AL662924) Human DNA sequence from clone RP11-108J9 on chrom... 50 0.18 1
(EK155281) 1095458002649 Global-Ocean-Sampling_GS-31-01-01-1... 50 0.18 1
(AM634622) Entamoeba dispar GSS, clone dispar126c02.q1k. 38 0.19 2
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 32 0.20 12
(BJ392024) Dictyostelium discoideum cDNA clone:dds26h04, 5' ... 34 0.22 3
(AE013218) Buchnera aphidicola str. Sg (Schizaphis graminum)... 36 0.23 12
(AC155817) Mus musculus BAC clone RP23-473M8 from chromosome... 36 0.23 8
(AL713898) Mouse DNA sequence from clone RP23-253D13 on chro... 44 0.38 7
(AC110215) Mus musculus chromosome 3 clone RP24-487M20 map 3... 34 0.38 9
(CT955975) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 36 0.39 2
(BX293980) Mycoplasma mycoides subsp. mycoides SC str. PG1, ... 36 0.41 18
(AE014840) Plasmodium falciparum 3D7 chromosome 11 section 5... 36 0.47 12
(EJ436399) 1093015282770 Global-Ocean-Sampling_GS-28-01-01-1... 38 0.50 2
(EJ365617) 1092963705184 Global-Ocean-Sampling_GS-28-01-01-1... 38 0.50 2
(EJ485767) 1095403499756 Global-Ocean-Sampling_GS-28-01-01-1... 38 0.50 2
(EJ034147) 1095454063965 Global-Ocean-Sampling_GS-26-01-01-1... 38 0.50 2
(EJ564244) 1092959694065 Global-Ocean-Sampling_GS-29-01-01-1... 38 0.50 2
(AC074054) Oryza sativa Japonica Group chromosome 10 clone O... 38 0.52 5
(AF250284) Amsacta moorei entomopoxvirus, complete genome. 32 0.55 13
(AC186359) Gallus gallus BAC clone CH261-54F21 from chromoso... 48 0.70 1
(AC165049) Phakopsora pachyrhizi clone JGIAFNA-1033P17, comp... 48 0.70 1
(AL646087) Human DNA sequence from clone RP11-412K4 on chrom... 48 0.70 1
(AC015699) Homo sapiens chromosome 11 clone RP11-147P7 map 1... 48 0.70 1
(EH229669) JGI_ACAC5510.fwd ACAC Phakopsora pachyrhizi TW72-... 48 0.70 1
(DA569696) Homo sapiens cDNA clone HEMBA1003323, 5' end, mRN... 48 0.70 1
(AE017308) Mycoplasma mobile 163K complete genome. 32 0.72 17
(Z49942) D.virilis egp-1 and egp-2 genes. 38 0.74 3
(AE017245) Mycoplasma synoviae 53, complete genome. 38 0.85 16
(CP000962) Clostridium botulinum A3 str. Loch Maree, complet... 40 0.85 16
(AC164238) Bos taurus clone CH240-150A21, *** SEQUENCING IN ... 44 0.94 7
(AY653733) Acanthamoeba polyphaga mimivirus, complete genome. 32 0.98 19
(CR925677) Ehrlichia ruminantium str. Gardel, complete genome. 36 1.1 17
(AP009247) Candidatus Vesicomyosocius okutanii HA DNA, compl... 38 1.1 19
(AL445564) Mycoplasma pulmonis (strain UAB CTIP) complete ge... 32 1.1 13
(CR847495) Zebrafish DNA sequence from clone DKEY-150G9 in l... 34 1.2 6
(CT030723) Mouse DNA sequence from clone RP23-33L24 on chrom... 34 1.4 2
(AC164108) Mus musculus BAC clone RP24-96K15 from chromosome... 34 1.4 2
(AE014823) Plasmodium falciparum 3D7 chromosome 14 section 8... 36 1.4 10
(AC202297) Medicago truncatula clone mth2-192p9, WORKING DRA... 36 1.5 5
(EJ064333) 1095458021331 Global-Ocean-Sampling_GS-26-01-01-1... 36 1.5 3
(AL929356) Plasmodium falciparum strain 3D7, chromosome 9; s... 32 1.6 13
(AE014822) Plasmodium falciparum 3D7 chromosome 14 section 7... 36 1.6 11
(CU565473) Zebrafish DNA sequence from clone ZFOS-1346H10 in... 34 1.6 4
(AC187344) Trichinella spiralis BAC clone TS195-42H12 from c... 38 1.7 8
(AP010097) Lotus japonicus genomic DNA, chromosome 1, clone:... 38 1.8 4
(EJ918592) 1093018588743 Global-Ocean-Sampling_GS-30-02-01-1... 34 1.9 2
(EJ817700) 1093017523615 Global-Ocean-Sampling_GS-30-02-01-1... 34 1.9 2
(BJ362829) Dictyostelium discoideum cDNA clone:ddc23m18, 5' ... 38 1.9 2
(EJ772289) 1092971400535 Global-Ocean-Sampling_GS-30-02-01-1... 42 2.0 2
(EE054839) zf_30d3k_16_C11 Developmental library II Taeniopy... 44 2.2 2
(ER360042) 1092402527191 Global-Ocean-Sampling_GS-34-01-01-1... 42 2.2 2
(AL035476) Plasmodium falciparum MAL4P3. 32 2.3 13
(AF165818) Guillardia theta nucleomorph chromosome 1, comple... 36 2.3 10
(CP000053) Rickettsia felis URRWXCal2, complete genome. 36 2.3 14
(EK437327) 1095521080906 Global-Ocean-Sampling_GS-31-01-01-1... 36 2.5 2
(EJ833698) 1093017605480 Global-Ocean-Sampling_GS-30-02-01-1... 36 2.5 2
(CR962124) Medicago truncatula chromosome 5 clone mth2-44c15... 38 2.5 8
(EJ465258) 1095390187041 Global-Ocean-Sampling_GS-28-01-01-1... 42 2.5 2
(EJ242475) 1095333001647 Global-Ocean-Sampling_GS-27-01-01-1... 42 2.6 2
(EI332050) GM_WBc0072A07.f GM_WBc Glycine max genomic clone ... 36 2.6 2
(EJ303843) 1095390054050 Global-Ocean-Sampling_GS-27-01-01-1... 42 2.6 2
(EK273536) 1095462267567 Global-Ocean-Sampling_GS-31-01-01-1... 42 2.6 2
(BX950225) Zebrafish DNA sequence from clone CH211-173B8 in ... 46 2.8 1
(EF039803) Synthetic construct Bacillus anthracis clone FLH2... 46 2.8 1
(BV004540) S208P6647RA11.T0 129S1/SvImJ Mus musculus STS gen... 46 2.8 1
(AC123703) Mus musculus chromosome 3, clone RP23-345N18, com... 46 2.8 1
(AE014298) Drosophila melanogaster chromosome X, complete se... 46 2.8 1
(AC154050) Drosophila melanogaster clone BACR22M24, complete... 46 2.8 1
(AC021639) Drosophila melanogaster, chromosome X, region 12E... 46 2.8 1
(AC010705) Drosophila melanogaster, chromosome X, region 12D... 46 2.8 1
(AC068943) Homo sapiens BAC clone RP11-769M2 from 2, complet... 46 2.8 1
(AC127792) Rattus norvegicus clone CH230-107N4, *** SEQUENCI... 46 2.8 1
(AC118912) Rattus norvegicus clone CH230-11P16, *** SEQUENCI... 46 2.8 1
(AC107888) Homo sapiens chromosome 18 clone RP11-45N23 map 1... 46 2.8 1
(AC107252) Rattus norvegicus clone CH230-11P3, *** SEQUENCIN... 46 2.8 1
(AC095122) Rattus norvegicus clone CH230-8A12, *** SEQUENCIN... 46 2.8 1
(AC080056) Homo sapiens chromosome 2 clone RP13-492K12 map 2... 46 2.8 1
(CR936279) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 2.8 1
(AC224450) Bos taurus clone CH240-484J2, WORKING DRAFT SEQUE... 46 2.8 1
(AC224303) Bos taurus clone CH240-489L22, WORKING DRAFT SEQU... 46 2.8 1
(AC222106) Bos taurus clone CH240-371E11, WORKING DRAFT SEQU... 46 2.8 1
(AC015029) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 46 2.8 1
(FH537095) CHO_OF4400xn06r1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 2.8 1
(ET873748) CHO_OF265xf05r1.ab1 CHO_OF Nicotiana tabacum geno... 46 2.8 1

>(BJ428469) Dictyostelium discoideum cDNA clone:ddv12e06, 3' end,
single read.
Length = 758

Score = 779 bits (393), Expect(3) = 0.0
Identities = 393/393 (100%)
Strand = Plus / Minus


Query: 689 gtgattggaaaggtgcaatttttaattatcattgtgcaaataattatgtaacaggattaa 748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gtgattggaaaggtgcaatttttaattatcattgtgcaaataattatgtaacaggattaa 335


Query: 749 tggggttaggagatgaagaagatacaatttcaaagaatttagtattagttttaacaaata 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tggggttaggagatgaagaagatacaatttcaaagaatttagtattagttttaacaaata 275


Query: 809 atattgcaatttgtaatatgaaattaggtaaattcaaaagatcaatcgaattattagatc 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atattgcaatttgtaatatgaaattaggtaaattcaaaagatcaatcgaattattagatc 215


Query: 869 aagttttaaagagtgatccaaacaatgtcaaagcattatatagaagaggtaaatgtttgg 928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aagttttaaagagtgatccaaacaatgtcaaagcattatatagaagaggtaaatgtttgg 155


Query: 929 tagcagagaaagaatatatacatgctgaagaagatttagaaaaagctctaactctcactc 988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tagcagagaaagaatatatacatgctgaagaagatttagaaaaagctctaactctcactc 95


Query: 989 caaatgataaagaaattatagctgaattgaaaatttgtagacaaaaatcaaatgaattca 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 caaatgataaagaaattatagctgaattgaaaatttgtagacaaaaatcaaatgaattca 35


Query: 1049 aaaaggttgaagcaaaagcttatagtaaaatgt 1081
|||||||||||||||||||||||||||||||||
Sbjct: 34 aaaaggttgaagcaaaagcttatagtaaaatgt 2

Score = 373 bits (188), Expect(3) = 0.0
Identities = 188/188 (100%)
Strand = Plus / Minus


Query: 325 ggcgatgatgttaatgttagttttacaattgctttaattttcgttacaattatacaatta 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 ggcgatgatgttaatgttagttttacaattgctttaattttcgttacaattatacaatta 699


Query: 385 tttaaacaagatgcaagtattaattcactccttaataatgcatcaacaattttagtaaat 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tttaaacaagatgcaagtattaattcactccttaataatgcatcaacaattttagtaaat 639


Query: 445 atcctttataaacaaggtaatcacattgattcaatggatttattaattgaaacttttgaa 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 atcctttataaacaaggtaatcacattgattcaatggatttattaattgaaacttttgaa 579


Query: 505 atactttc 512
||||||||
Sbjct: 578 atactttc 571

Score = 319 bits (161), Expect(3) = 0.0
Identities = 161/161 (100%)
Strand = Plus / Minus


Query: 521 caaatgatgaaaataaaagaatgtattatgtatcaagaagtaatgaaattgctcgttata 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 caaatgatgaaaataaaagaatgtattatgtatcaagaagtaatgaaattgctcgttata 503


Query: 581 aatctgatttccaatctggtaaacaagttaaactttcaccaacatcatcagaaaaacttc 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aatctgatttccaatctggtaaacaagttaaactttcaccaacatcatcagaaaaacttc 443


Query: 641 aaaaagcatttacctataaagaaaaaggtactgatgcattt 681
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaaaagcatttacctataaagaaaaaggtactgatgcattt 402

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 1,428,123,347
Number of extensions: 95542164
Number of successful extensions: 8232961
Number of sequences better than 10.0: 194
Length of query: 1081
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 1057
Effective length of database: 97,308,875,965
Effective search space: 102855481895005
Effective search space used: 102855481895005
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.21
Homology vs Protein
Query= Contig-U06144-1 (Contig-U06144-1Q) /CSM_Contig/Contig-U06144-1Q.Seq.d
(1081 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AJ720350_1(AJ720350|pid:none) Gallus gallus mRNA for hypothetica... 97 7e-19
(Q9VL78) RecName: Full=FK506-binding protein 59; EC=5.2... 96 2e-18
BC068678_1(BC068678|pid:none) Xenopus laevis hypothetical protei... 94 6e-18
AY723747_1(AY723747|pid:none) Gallus gallus FK-506 binding prote... 92 2e-17
AK128557_1(AK128557|pid:none) Homo sapiens cDNA FLJ46716 fis, cl... 92 2e-17
EU964693_1(EU964693|pid:none) Zea mays clone 280884 peptidyl-pro... 92 4e-17
AK222807_1(AK222807|pid:none) Homo sapiens mRNA for FK506 bindin... 91 5e-17
AY890749_1(AY890749|pid:none) Synthetic construct Homo sapiens c... 91 5e-17
U42031_1(U42031|pid:none) Human 54 kDa progesterone receptor-ass... 91 5e-17
(Q95L05) RecName: Full=FK506-binding protein 5; EC=5.2.... 91 5e-17
BC111050_1(BC111050|pid:none) Homo sapiens FK506 binding protein... 91 5e-17
AK302704_1(AK302704|pid:none) Homo sapiens cDNA FLJ57237 complet... 91 5e-17
(Q13451) RecName: Full=FK506-binding protein 5; EC=5.2.... 91 5e-17
BC070730_1(BC070730|pid:none) Xenopus laevis hypothetical protei... 90 1e-16
(Q9XSH5) RecName: Full=FK506-binding protein 5; EC=5.2.... 90 1e-16
(Q64378) RecName: Full=FK506-binding protein 5; EC=5.2.... 90 2e-16
U49453_1(U49453|pid:none) Arabidopsis thaliana FK506 binding pro... 89 2e-16
(Q02790) RecName: Full=FK506-binding protein 4; EC=5.2.... 89 2e-16
AK159389_1(AK159389|pid:none) Mus musculus osteoclast-like cell ... 89 2e-16
(Q9XSI2) RecName: Full=FK506-binding protein 5; EC=5.2.... 89 2e-16
AY892435_1(AY892435|pid:none) Synthetic construct Homo sapiens c... 89 2e-16
AK228029_1(AK228029|pid:none) Arabidopsis thaliana mRNA for pept... 89 3e-16
AB026647_19(AB026647|pid:none) Arabidopsis thaliana genomic DNA,... 89 3e-16
AB015468_3(AB015468|pid:none) Arabidopsis thaliana genomic DNA, ... 89 3e-16
(Q38931) RecName: Full=70 kDa peptidyl-prolyl isomerase; ... 89 3e-16
(Q43207) RecName: Full=70 kDa peptidyl-prolyl isomerase; ... 88 4e-16
(P27124) RecName: Full=FK506-binding protein 4; EC=5.2.... 88 6e-16
BC061335_1(BC061335|pid:none) Xenopus tropicalis peptidylprolyl ... 87 8e-16
(P30416) RecName: Full=FK506-binding protein 4; EC=5.2.... 87 1e-15
(Q9QVC8) RecName: Full=FK506-binding protein 4; EC=5.2.... 87 1e-15
AF531427_1(AF531427|pid:none) Rattus norvegicus FK506 binding pr... 87 1e-15
BT041406_1(BT041406|pid:none) Zea mays full-length cDNA clone ZM... 87 1e-15
BC129618_1(BC129618|pid:none) Xenopus laevis hypothetical LOC495... 86 3e-15
EU970915_1(EU970915|pid:none) Zea mays clone 353915 peptidyl-pro... 85 4e-15
AK103172_1(AK103172|pid:none) Oryza sativa Japonica Group cDNA c... 85 5e-15
AK160202_1(AK160202|pid:none) Mus musculus 10 days embryo whole ... 84 1e-14
S14538(S14538;I48856)transition protein - mouse 83 2e-14
X17069_1(X17069|pid:none) Mus musculus partial mRNA for immunoph... 83 2e-14
AY847068_1(AY847068|pid:none) Toxoplasma gondii dual-family immu... 83 2e-14
S14529(S14529;JQ0801;A28447) transition protein 2 - mouse &X170... 83 2e-14
AP004864_23(AP004864|pid:none) Oryza sativa Japonica Group genom... 82 2e-14
BC161538_1(BC161538|pid:none) Xenopus tropicalis hypothetical pr... 82 2e-14
BT073249_1(BT073249|pid:none) Oncorhynchus mykiss clone omyk-evn... 82 4e-14
T06489(T06489) probable peptidylprolyl isomerase (EC 5.2.1.8) FK... 82 4e-14
BT075042_1(BT075042|pid:none) Osmerus mordax clone omor-eva-516-... 81 6e-14
BT043603_1(BT043603|pid:none) Salmo salar clone HM4_3222 peptidy... 79 3e-13
BC071388_1(BC071388|pid:none) Danio rerio peptidylprolyl isomera... 78 5e-13
AE014188_450(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 77 1e-12
BT073082_1(BT073082|pid:none) Oncorhynchus mykiss clone omyk-evn... 76 2e-12
AL773593_2(AL773593|pid:none) Zebrafish DNA sequence from clone ... 76 2e-12
AB172112_1(AB172112|pid:none) Macaca fascicularis brain cDNA clo... 76 2e-12
CP000080_129(CP000080|pid:none) Leishmania major strain Friedlin... 75 4e-12
(Q08752) RecName: Full=40 kDa peptidyl-prolyl cis-trans isomeras... 75 4e-12
AY893314_1(AY893314|pid:none) Synthetic construct Homo sapiens c... 75 4e-12
BX897658_1(BX897658|pid:none) Zebrafish DNA sequence from clone ... 74 7e-12
BC090698_1(BC090698|pid:none) Danio rerio si:ch211-13k12.1, mRNA... 74 7e-12
DQ440191_1(DQ440191|pid:none) Aedes aegypti clone AET-1660 FKBP-... 74 9e-12
(Q6DGG0) RecName: Full=40 kDa peptidyl-prolyl cis-trans isomeras... 72 3e-11
AM468901_7(AM468901|pid:none) Vitis vinifera contig VV78X107915.... 72 4e-11
(Q9C566) RecName: Full=Peptidyl-prolyl cis-trans isomerase CYP40... 70 1e-10
BT052930_1(BT052930|pid:none) Medicago truncatula clone MTYFL_FM... 70 1e-10
AK146122_1(AK146122|pid:none) Mus musculus TIB-55 BB88 cDNA, RIK... 70 1e-10
AF030635_1(AF030635|pid:none) Mus musculus FK-506 binding protei... 70 1e-10
AK152198_1(AK152198|pid:none) Mus musculus bone marrow macrophag... 70 1e-10
(O35465) RecName: Full=FK506-binding protein 8; EC=5.2.... 70 1e-10
AY187231_1(AY187231|pid:none) Mus musculus FK506-binding protein... 70 1e-10
(Q14318) RecName: Full=FK506-binding protein 8; EC=5.2.... 70 2e-10
BX538124_1(BX538124|pid:none) Homo sapiens mRNA; cDNA DKFZp686M2... 70 2e-10
AK313363_1(AK313363|pid:none) Homo sapiens cDNA, FLJ93891, Homo ... 70 2e-10
AK300571_1(AK300571|pid:none) Homo sapiens cDNA FLJ56370 complet... 70 2e-10
AK222838_1(AK222838|pid:none) Homo sapiens mRNA for FK506-bindin... 70 2e-10
AB463044_1(AB463044|pid:none) Synthetic construct DNA, clone: pF... 70 2e-10
AC005387_2(AC005387|pid:none) Homo sapiens chromosome 19, cosmid... 70 2e-10
AK070404_1(AK070404|pid:none) Oryza sativa Japonica Group cDNA c... 69 3e-10
AC082643_4(AC082643|pid:none) Arabidopsis thaliana chromosome 1 ... 69 4e-10
EU961494_1(EU961494|pid:none) Zea mays clone 235899 peptidyl-pro... 69 4e-10
DQ216381_1(DQ216381|pid:none) Taeniopygia guttata clone 0058P000... 68 5e-10
AY812013_1(AY812013|pid:none) Schistosoma japonicum SJCHGC02834 ... 68 5e-10
AK068112_1(AK068112|pid:none) Oryza sativa Japonica Group cDNA c... 68 6e-10
BT067575_1(BT067575|pid:none) Zea mays full-length cDNA clone ZM... 67 1e-09
CU928178_242(CU928178|pid:none) Zygosaccharomyces rouxii strain ... 67 1e-09
L11668_1(L11668|pid:none) Cow cyclophilin-40 mRNA, partial cds. 66 2e-09
FM992688_48(FM992688|pid:none) Candida dubliniensis CD36 chromos... 65 4e-09
AK065114_1(AK065114|pid:none) Oryza sativa Japonica Group cDNA c... 65 4e-09
FN315132_1(FN315132|pid:none) Schistosoma japonicum isolate Anhu... 65 4e-09
FN320255_1(FN320255|pid:none) Schistosoma japonicum isolate Anhu... 65 4e-09
FN320256_1(FN320256|pid:none) Schistosoma japonicum isolate Anhu... 64 7e-09
AK243151_1(AK243151|pid:none) Oryza sativa Japonica Group cDNA, ... 64 7e-09
FN320258_1(FN320258|pid:none) Schistosoma japonicum isolate Anhu... 64 7e-09
T15850(T15850) hypothetical protein C56C10.10 - Caenorhabditis e... 63 2e-08
CU928170_603(CU928170|pid:none) Kluyveromyces thermotolerans str... 63 2e-08
AB179322_1(AB179322|pid:none) Macaca fascicularis testis cDNA cl... 63 2e-08
(Q6P5P3) RecName: Full=Tetratricopeptide repeat protein 9C; ... 63 2e-08
AK012028_1(AK012028|pid:none) Mus musculus 10 days embryo whole ... 63 2e-08
(O13754) RecName: Full=Hsp70/Hsp90 co-chaperone cns1; &CU329670... 63 2e-08
FN357390_31(FN357390|pid:none) Schistosoma mansoni genome sequen... 63 2e-08
AB169439_1(AB169439|pid:none) Macaca fascicularis testis cDNA, c... 62 3e-08
AK008753_1(AK008753|pid:none) Mus musculus adult male stomach cD... 62 3e-08
(Q9P3X9) RecName: Full=41 kDa peptidyl-prolyl cis-trans isomeras... 62 3e-08
AE013599_2897(AE013599|pid:none) Drosophila melanogaster chromos... 62 3e-08
CP001323_504(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 62 3e-08
DQ219812_1(DQ219812|pid:none) Schistosoma japonicum p50 immunoph... 62 3e-08
D84533(D84533)hypothetical protein At2g15790 [imported] - Arabid... 62 3e-08
AK122008_1(AK122008|pid:none) Oryza sativa Japonica Group cDNA c... 61 6e-08
FB823335_1(FB823335|pid:none) Sequence 42608 from Patent WO20080... 61 8e-08
AC137552_2(AC137552|pid:none) Medicago truncatula clone mth2-9k5... 60 1e-07
AY557959_1(AY557959|pid:none) Saccharomyces cerevisiae clone FLH... 60 1e-07
(P53691) RecName: Full=Peptidyl-prolyl cis-trans isomerase CPR6;... 60 1e-07
AE014297_706(AE014297|pid:none) Drosophila melanogaster chromoso... 60 1e-07
EF146673_1(EF146673|pid:none) Populus trichocarpa clone WS01211_... 60 2e-07
FM992690_83(FM992690|pid:none) Candida dubliniensis CD36 chromos... 59 2e-07
U89984_1(U89984|pid:none) Acanthamoeba castellanii transformatio... 59 2e-07
AM055942_147(AM055942|pid:none) Toxoplasma gondii RH, genomic DN... 59 2e-07
CR380950_215(CR380950|pid:none) Candida glabrata strain CBS138 c... 59 3e-07
AB464523_1(AB464523|pid:none) Synthetic construct DNA, clone: pF... 59 3e-07
AF016422_4(AF016422|pid:none) Caenorhabditis elegans cosmid R09E... 59 3e-07
AB206403_1(AB206403|pid:none) Bombyx mori mRNA for FK506-binding... 59 4e-07
(Q6MG81) RecName: Full=FK506-binding protein-like; AltName: Full... 59 4e-07
AM468683_1(AM468683|pid:none) Vitis vinifera contig VV78X208778.... 59 4e-07
BT034015_1(BT034015|pid:none) Zea mays full-length cDNA clone ZM... 58 5e-07
AF016456_1(AF016456|pid:none) Brugia malayi peptidyl-prolyl cis-... 58 5e-07
AB174457_1(AB174457|pid:none) Macaca fascicularis brain cDNA clo... 58 5e-07
AB087254_1(AB087254|pid:none) Mus musculus Tomm34a, Tomm34b gene... 58 7e-07
CR382136_382(CR382136|pid:none) Debaryomyces hansenii strain CBS... 58 7e-07
AK011786_1(AK011786|pid:none) Mus musculus 10 days embryo whole ... 58 7e-07
CP000099_3513(CP000099|pid:none) Methanosarcina barkeri str. Fus... 58 7e-07
CP000591_99(CP000591|pid:none) Ostreococcus lucimarinus CCE9901 ... 57 9e-07
AL132960_31(AL132960|pid:none) Arabidopsis thaliana DNA chromoso... 57 9e-07
AF274877_1(AF274877|pid:none) Danio rerio Ah receptor interactin... 57 9e-07
U77365_1(U77365|pid:none) Arabidopsis thaliana pasticcino 1-A (P... 57 9e-07
(Q7DMA9) RecName: Full=Peptidyl-prolyl isomerase PASTICCINO1; ... 57 9e-07
U77366_1(U77366|pid:none) Arabidopsis thaliana pasticcino 1-D (P... 57 9e-07
BT080551_1(BT080551|pid:none) Caligus clemensi clone ccle-evs-51... 57 1e-06
(P0C1J7) RecName: Full=FK506-binding protein 5; EC=5.2.... 57 1e-06
U58970_1(U58970|pid:none) Human putative outer mitochondrial mem... 57 1e-06
T21594(T21594) hypothetical protein F31D4.3 - Caenorhabditis ele... 57 1e-06
(Q8BW49) RecName: Full=Tetratricopeptide repeat protein 12; ... 56 2e-06
AK076457_1(AK076457|pid:none) Mus musculus 0 day neonate head cD... 56 2e-06
(Q5U8Z7) RecName: Full=Peptidyl-prolyl cis-trans isomerase D; ... 55 3e-06
AC136506_17(AC136506|pid:none) Medicago truncatula clone mth2-33... 55 3e-06
BC140528_1(BC140528|pid:none) Bos taurus tetratricopeptide repea... 55 3e-06
(Q5EA11) RecName: Full=Tetratricopeptide repeat protein 4; ... 55 3e-06
BT020758_1(BT020758|pid:none) Bos taurus tetratricopeptide repea... 55 3e-06
BT021559_1(BT021559|pid:none) Bos taurus tetratricopeptide repea... 55 3e-06
BT074872_1(BT074872|pid:none) Osmerus mordax clone omor-rgc-511-... 55 3e-06
(P0C1I1) RecName: Full=Peptidyl-prolyl cis-trans isomerase D; ... 55 6e-06
(Q4HXF6) RecName: Full=Peptidyl-prolyl cis-trans isomerase D; ... 55 6e-06
CR954202_401(CR954202|pid:none) Ostreococcus tauri strain OTTH05... 55 6e-06
AK302128_1(AK302128|pid:none) Homo sapiens cDNA FLJ54989 complet... 55 6e-06
AM910995_151(AM910995|pid:none) Plasmodium knowlesi strain H chr... 55 6e-06
AK222952_1(AK222952|pid:none) Homo sapiens mRNA for translocase ... 55 6e-06
AM435575_1(AM435575|pid:none) Vitis vinifera contig VV78X031197.... 55 6e-06
BC079409_1(BC079409|pid:none) Rattus norvegicus tetratricopeptid... 55 6e-06
(Q15785) RecName: Full=Mitochondrial import receptor subunit TOM... 55 6e-06
(O35450) RecName: Full=FK506-binding protein-like; AltName: Full... 54 7e-06
BC149464_1(BC149464|pid:none) Bos taurus FK506 binding protein l... 54 7e-06
AF311312_1(AF311312|pid:none) Homo sapiens infertility-related s... 54 9e-06
AK057482_1(AK057482|pid:none) Homo sapiens cDNA FLJ32920 fis, cl... 54 9e-06
FN357297_64(FN357297|pid:none) Schistosoma mansoni genome sequen... 54 9e-06
CT005272_365(CT005272|pid:none) Leishmania major strain Friedlin... 54 9e-06
AK146018_1(AK146018|pid:none) Mus musculus 15 days pregnant adul... 54 9e-06
AM910994_437(AM910994|pid:none) Plasmodium knowlesi strain H chr... 54 9e-06
(Q5KFV5) RecName: Full=Peptidyl-prolyl cis-trans isomerase D; ... 54 9e-06
AP008981_231(AP008981|pid:none) Orientia tsutsugamushi str. Iked... 54 1e-05
(Q6CBP4) RecName: Full=Peptidyl-prolyl cis-trans isomerase D; ... 54 1e-05
AK065877_1(AK065877|pid:none) Oryza sativa Japonica Group cDNA c... 54 1e-05
CU928180_83(CU928180|pid:none) Kluyveromyces thermotolerans stra... 54 1e-05
CR954220_83(CR954220|pid:none) Ostreococcus tauri strain OTTH059... 54 1e-05
AP008981_653(AP008981|pid:none) Orientia tsutsugamushi str. Iked... 53 2e-05
CR940347_953(CR940347|pid:none) Theileria annulata strain Ankara... 53 2e-05
CP000582_450(CP000582|pid:none) Ostreococcus lucimarinus CCE9901... 53 2e-05
(Q3KRD5) RecName: Full=Mitochondrial import receptor subunit TOM... 53 2e-05
(Q6BXZ7) RecName: Full=Peptidyl-prolyl cis-trans isomerase D; ... 53 2e-05
AL445066_196(AL445066|pid:none) Thermoplasma acidophilum complet... 53 2e-05
AC079933_11(AC079933|pid:none) Trypanosoma brucei chromosome 4 c... 53 2e-05
AF305603_1(AF305603|pid:none) Borrelia burgdorferi isolate 3 LMP... 53 2e-05
CR926478_1(CR926478|pid:none) Pongo abelii mRNA; cDNA DKFZp468E0... 53 2e-05
AY093009_1(AY093009|pid:none) Arabidopsis thaliana FKBP-type pep... 53 2e-05
AY891724_1(AY891724|pid:none) Synthetic construct Homo sapiens c... 53 2e-05
(Q9LDC0) RecName: Full=42 kDa peptidyl-prolyl isomerase; ... 53 2e-05
CP001333_127(CP001333|pid:none) Micromonas sp. RCC299 chromosome... 52 3e-05
AM494971_473(AM494971|pid:none) Leishmania braziliensis chromoso... 52 3e-05
CP001357_950(CP001357|pid:none) Brachyspira hyodysenteriae WA1, ... 52 4e-05
(P47103) RecName: Full=Peptidyl-prolyl cis-trans isomerase CYP7;... 52 4e-05
BT085860_1(BT085860|pid:none) Zea mays full-length cDNA clone ZM... 52 4e-05
BT015924_1(BT015924|pid:none) Arabidopsis thaliana At1g62740 gen... 52 4e-05
FB910853_1(FB910853|pid:none) Sequence 130126 from Patent WO2008... 52 4e-05
BC083794_1(BC083794|pid:none) Rattus norvegicus tetratricopeptid... 52 4e-05
AE014298_1780(AE014298|pid:none) Drosophila melanogaster chromos... 52 4e-05
AK228637_1(AK228637|pid:none) Arabidopsis thaliana mRNA for TPR-... 52 4e-05
BC047950_1(BC047950|pid:none) Homo sapiens tetratricopeptide rep... 52 5e-05
(Q92623) RecName: Full=Tetratricopeptide repeat protein 9A; ... 52 5e-05
BC168518_1(BC168518|pid:none) Xenopus laevis cDNA clone MGC:1799... 52 5e-05
D86980_1(D86980|pid:none) Homo sapiens mRNA for KIAA0227 gene, p... 52 5e-05
BC074276_1(BC074276|pid:none) Xenopus laevis MGC84046 protein, m... 51 6e-05
(Q54IP0) RecName: Full=DnaJ homolog subfamily C member 7 homolog; 51 6e-05
(Q5ACI8) RecName: Full=Peptidyl-prolyl cis-trans isomerase D; ... 51 8e-05
BC028891_1(BC028891|pid:none) Mus musculus tetratricopeptide rep... 51 8e-05
AJ720539_1(AJ720539|pid:none) Gallus gallus mRNA for hypothetica... 51 8e-05
(Q80ZX8) RecName: Full=Sperm-associated antigen 1; AltName: Full... 51 8e-05
CP001357_2478(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 51 8e-05
T16689(T16689) hypothetical protein R05F9.10 - Caenorhabditis el... 51 8e-05
(Q8R3H9) RecName: Full=Tetratricopeptide repeat protein 4; ... 51 8e-05
DQ440318_1(DQ440318|pid:none) Aedes aegypti clone AET-4053 molec... 51 8e-05
AM494956_179(AM494956|pid:none) Leishmania braziliensis chromoso... 50 1e-04
AM270178_18(AM270178|pid:none) Aspergillus niger contig An08c023... 50 1e-04
U48868_1(U48868|pid:none) Saccharomyces cerevisiae cyclophilin (... 50 1e-04
CP001325_536(CP001325|pid:none) Micromonas sp. RCC299 chromosome... 50 1e-04
AE016814_269(AE016814|pid:none) Ashbya gossypii (= Eremothecium ... 50 1e-04
CP000081_474(CP000081|pid:none) Leishmania major chromosome 35, ... 50 1e-04
AK052830_1(AK052830|pid:none) Mus musculus 10 days lactation, ad... 50 1e-04
(A4IHU6) RecName: Full=Tetratricopeptide repeat protein 9C; ... 50 1e-04
DQ311264_1(DQ311264|pid:none) Bombyx mori DnaJ-like protein isof... 50 1e-04
AK150952_1(AK150952|pid:none) Mus musculus bone marrow macrophag... 50 1e-04
AK167758_1(AK167758|pid:none) Mus musculus cDNA, RIKEN full-leng... 50 1e-04
AK049834_1(AK049834|pid:none) Mus musculus adult male hippocampu... 50 1e-04
AE014188_398(AE014188|pid:none) Plasmodium falciparum 3D7 chromo... 50 1e-04
AP007150_293(AP007150|pid:none) Aspergillus oryzae RIB40 genomic... 50 2e-04
(P33313) RecName: Full=Hsp70/Hsp90 co-chaperone CNS1; AltName: F... 50 2e-04
AM989984_66(AM989984|pid:none) Zygosaccharomyces rouxii strain C... 50 2e-04
AB019230_17(AB019230|pid:none) Arabidopsis thaliana genomic DNA,... 49 2e-04
BC061340_1(BC061340|pid:none) Xenopus tropicalis FK506 binding p... 49 2e-04
AK133931_1(AK133931|pid:none) Mus musculus 8 days embryo whole b... 49 2e-04
AP007174_279(AP007174|pid:none) Aspergillus oryzae RIB40 genomic... 49 2e-04
AF305607_1(AF305607|pid:none) Borrelia burgdorferi isolate 7 LMP... 49 2e-04
GN037485_1(GN037485|pid:none) Sequence 61 from Patent WO20090104... 49 2e-04
BC085642_1(BC085642|pid:none) Danio rerio stress-induced-phospho... 49 2e-04
AF305601_1(AF305601|pid:none) Borrelia burgdorferi isolate 1 LMP... 49 2e-04
(Q6FNU6) RecName: Full=Peptidyl-prolyl cis-trans isomerase D; ... 49 3e-04
EU745987_1(EU745987|pid:none) Drosophila simulans isolate MD62 C... 49 3e-04
EF066649_1(EF066649|pid:none) Trichinella spiralis clone T32227 ... 49 3e-04
CU633455_100(CU633455|pid:none) Podospora anserina genomic DNA c... 49 4e-04
AF305605_1(AF305605|pid:none) Borrelia burgdorferi isolate 5 LMP... 49 4e-04
BT034001_1(BT034001|pid:none) Zea mays full-length cDNA clone ZM... 49 4e-04
AK173111_1(AK173111|pid:none) Mus musculus mRNA for mKIAA1148 pr... 49 4e-04
BC089352_1(BC089352|pid:none) Mus musculus tetratricopeptide rep... 49 4e-04
EU972939_1(EU972939|pid:none) Zea mays clone 390399 heat shock p... 49 4e-04
EU745991_1(EU745991|pid:none) Drosophila simulans isolate MD105 ... 49 4e-04
AL596246_4(AL596246|pid:none) Mouse DNA sequence from clone RP23... 49 4e-04
AF305599_1(AF305599|pid:none) Borrelia burgdorferi strain B31 LM... 49 4e-04
AM920437_83(AM920437|pid:none) Penicillium chrysogenum Wisconsin... 49 4e-04
CP001205_201(CP001205|pid:none) Borrelia burgdorferi ZS7, comple... 49 4e-04
AE010299_1572(AE010299|pid:none) Methanosarcina acetivorans str.... 48 5e-04
AF305608_1(AF305608|pid:none) Borrelia burgdorferi isolate 8 LMP... 48 5e-04
AB206398_1(AB206398|pid:none) Bombyx mori mRNA for Hsc70/Hsp90-o... 48 5e-04
DQ126335_1(DQ126335|pid:none) Pseudosciaena crocea heat shock pr... 48 5e-04
CP001080_329(CP001080|pid:none) Sulfurihydrogenibium sp. YO3AOP1... 48 7e-04
AK047292_1(AK047292|pid:none) Mus musculus 10 days neonate cereb... 48 7e-04
CR382122_444(CR382122|pid:none) Kluyveromyces lactis strain NRRL... 48 7e-04
FB910851_1(FB910851|pid:none) Sequence 130124 from Patent WO2008... 48 7e-04
(Q5ZKQ3) RecName: Full=RNA polymerase II-associated protein 3; ... 48 7e-04
CP001291_1331(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 48 7e-04
AE014297_4190(AE014297|pid:none) Drosophila melanogaster chromos... 47 9e-04
(P53043) RecName: Full=Serine/threonine-protein phosphatase T; ... 47 9e-04
AF056198_1(AF056198|pid:none) Drosophila melanogaster Hsp70/Hsp9... 47 9e-04
X89417_1(X89417|pid:none) S.cerevisiae DNA for protein phosphata... 47 9e-04
CR954214_95(CR954214|pid:none) Ostreococcus tauri strain OTTH059... 47 9e-04
CP000742_35(CP000742|pid:none) Methanococcus vannielii SB, compl... 47 9e-04
(Q4WIF3) RecName: Full=Peptidyl-prolyl cis-trans isomerase D; ... 47 9e-04
AK063937_1(AK063937|pid:none) Oryza sativa Japonica Group cDNA c... 47 9e-04
BC078016_1(BC078016|pid:none) Xenopus laevis stress-induced-phos... 47 9e-04
CU928180_588(CU928180|pid:none) Kluyveromyces thermotolerans str... 47 9e-04
CP000777_1761(CP000777|pid:none) Leptospira biflexa serovar Pato... 47 9e-04
AM910993_155(AM910993|pid:none) Plasmodium knowlesi strain H chr... 47 0.001
AK069965_1(AK069965|pid:none) Oryza sativa Japonica Group cDNA c... 47 0.001
BC166802_1(BC166802|pid:none) Rattus norvegicus tetratricopeptid... 47 0.001
CP001357_1760(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 47 0.001
AL929108_1(AL929108|pid:none) Zebrafish DNA sequence from clone ... 47 0.001
CP000139_3932(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,... 47 0.002
BC170780_1(BC170780|pid:none) Xenopus tropicalis small glutamine... 47 0.002
CT005258_165(CT005258|pid:none) Leishmania major strain Friedlin... 47 0.002
CP000393_2073(CP000393|pid:none) Trichodesmium erythraeum IMS101... 47 0.002
BT045157_1(BT045157|pid:none) Salmo salar clone ssal-rgf-513-261... 47 0.002
BC158508_1(BC158508|pid:none) Xenopus tropicalis small glutamine... 47 0.002
BC088960_1(BC088960|pid:none) Xenopus laevis hypothetical LOC496... 47 0.002
CP001357_1610(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 47 0.002
AL589883_10(AL589883|pid:none) Arabidopsis thaliana DNA chromoso... 46 0.002
(Q28IV3) RecName: Full=RNA polymerase II-associated protein 3; ... 46 0.002
CP001323_193(CP001323|pid:none) Micromonas sp. RCC299 chromosome... 46 0.002
AK118755_1(AK118755|pid:none) Arabidopsis thaliana At5g21990 mRN... 46 0.002
BC082515_1(BC082515|pid:none) Xenopus tropicalis unc-45 homolog ... 46 0.002
BT053758_1(BT053758|pid:none) Arabidopsis thaliana unknown prote... 46 0.002
BT049996_1(BT049996|pid:none) Salmo salar clone ssal-eve-544-277... 46 0.002
BT048696_1(BT048696|pid:none) Salmo salar clone ssal-eve-579-081... 46 0.002
CP001349_5943(CP001349|pid:none) Methylobacterium nodulans ORS 2... 46 0.002
BT045894_1(BT045894|pid:none) Salmo salar clone ssal-rgf-535-381... 46 0.002
AP008218_1453(AP008218|pid:none) Oryza sativa (japonica cultivar... 46 0.003
(Q95LZ5) RecName: Full=Tetratricopeptide repeat protein 16; ... 46 0.003
BX950229_885(BX950229|pid:none) Methanococcus maripaludis strain... 46 0.003
AF033339_1(AF033339|pid:none) Caenorhabditis briggsae UNC-45 gen... 46 0.003
AF179282_1(AF179282|pid:none) Pisum sativum Toc64 (toc64) mRNA, ... 46 0.003
(Q58208) RecName: Full=TPR repeat-containing protein MJ0798; &F... 46 0.003
BT039771_1(BT039771|pid:none) Zea mays full-length cDNA clone ZM... 46 0.003
FJ384982_1(FJ384982|pid:none) Bombina orientalis DnaJC7 mRNA, co... 46 0.003
(Q9H3U1) RecName: Full=Protein unc-45 homolog A; Short=... 46 0.003
AP008210_1442(AP008210|pid:none) Oryza sativa (japonica cultivar... 45 0.003
(Q8NEE8) RecName: Full=Tetratricopeptide repeat protein 16; ... 45 0.003
AC007070_12(AC007070|pid:none) Arabidopsis thaliana chromosome 2... 45 0.003
(Q75A33) RecName: Full=Peptidyl-prolyl cis-trans isomerase D; ... 45 0.003
BC031281_1(BC031281|pid:none) Homo sapiens tetratricopeptide rep... 45 0.003
AK007881_1(AK007881|pid:none) Mus musculus 10 day old male pancr... 45 0.003
AM167520_8(AM167520|pid:none) Malus x domestica transposon gene ... 45 0.003
AB093299_1(AB093299|pid:none) Mus musculus mRNA for mKIAA1728 pr... 45 0.004
CP000300_576(CP000300|pid:none) Methanococcoides burtonii DSM 62... 45 0.004
CP001357_1950(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 45 0.004
AK291555_1(AK291555|pid:none) Homo sapiens cDNA FLJ76863 complet... 45 0.004
AK302737_1(AK302737|pid:none) Homo sapiens cDNA FLJ53499 complet... 45 0.004
BC049032_1(BC049032|pid:none) Danio rerio zgc:56497, mRNA (cDNA ... 45 0.004
BC141367_1(BC141367|pid:none) Mus musculus tetratricopeptide rep... 45 0.004
CR954204_74(CR954204|pid:none) Ostreococcus tauri strain OTTH059... 45 0.004
(Q4P0V4) RecName: Full=Peptidyl-prolyl cis-trans isomerase D; ... 45 0.004
BT080130_1(BT080130|pid:none) Caligus clemensi clone ccle-evs-50... 45 0.004
AY355338_1(AY355338|pid:none) Lilium longiflorum pollen-specific... 45 0.004
BC047437_1(BC047437|pid:none) Mus musculus tetratricopeptide rep... 45 0.004
CR940347_716(CR940347|pid:none) Theileria annulata strain Ankara... 45 0.006
AK117340_1(AK117340|pid:none) Arabidopsis thaliana At4g37460 mRN... 45 0.006
(Q96EQ0) RecName: Full=Small glutamine-rich tetratricopeptide re... 45 0.006
AJ278120_1(AJ278120|pid:none) Homo sapiens mRNA for putative ank... 45 0.006
AF034085_1(AF034085|pid:none) Caenorhabditis elegans UNC-45 (unc... 45 0.006
(Q68FQ7) RecName: Full=RNA polymerase II-associated protein 3; ... 45 0.006
AL035601_11(AL035601|pid:none) Arabidopsis thaliana DNA chromoso... 45 0.006
CP000860_1180(CP000860|pid:none) Candidatus Desulforudis audaxvi... 45 0.006
(Q91XW8) RecName: Full=FK506-binding protein 6; EC=5.2.... 44 0.007
(Q3ZBZ8) RecName: Full=Stress-induced-phosphoprotein 1; ... 44 0.007
AC097280_15(AC097280|pid:none) Oryza sativa chromosome 3 BAC OSJ... 44 0.007
CU633900_953(CU633900|pid:none) Podospora anserina genomic DNA c... 44 0.007
AF367709_1(AF367709|pid:none) Mus musculus FK506 binding protein... 44 0.007
AK090036_1(AK090036|pid:none) Mus musculus RCB-1283 B16 melanoma... 44 0.007
FJ169492_1(FJ169492|pid:none) Arthrospira platensis S6 serine/th... 44 0.007
(Q5B4E7) RecName: Full=Peptidyl-prolyl cis-trans isomerase D; ... 44 0.007
AK241338_1(AK241338|pid:none) Oryza sativa Japonica Group cDNA, ... 44 0.007
BT041320_1(BT041320|pid:none) Zea mays full-length cDNA clone ZM... 44 0.007
AM920436_1277(AM920436|pid:none) Penicillium chrysogenum Wiscons... 44 0.010
BT037856_1(BT037856|pid:none) Zea mays full-length cDNA clone ZM... 44 0.010
AB384554_1(AB384554|pid:none) Synthetic construct DNA, clone: pF... 44 0.010
AC146875_8(AC146875|pid:none) Brassica rapa clone BAC KBrH117M18... 44 0.010
FN357489_16(FN357489|pid:none) Schistosoma mansoni genome sequen... 44 0.010
(Q8C1F5) RecName: Full=Tetratricopeptide repeat protein 16; ... 44 0.010
AC155342_23(AC155342|pid:none) Brassica rapa subsp. pekinensis c... 44 0.010
AK315009_1(AK315009|pid:none) Homo sapiens cDNA, FLJ95939, highl... 44 0.010
BC152558_1(BC152558|pid:none) Homo sapiens zinc finger CCCH-type... 44 0.010
(Q9UGR1) RecName: Full=Zinc finger CCCH domain-containing protei... 44 0.010
AK023849_1(AK023849|pid:none) Homo sapiens cDNA FLJ13787 fis, cl... 44 0.010
AY569436_1(AY569436|pid:none) Nicotiana benthamiana protein seri... 44 0.013
AK000542_1(AK000542|pid:none) Homo sapiens cDNA FLJ20535 fis, cl... 44 0.013
CP001337_1353(CP001337|pid:none) Chloroflexus aggregans DSM 9485... 44 0.013
AK147978_1(AK147978|pid:none) Mus musculus melanocyte cDNA, RIKE... 44 0.013
BC049406_1(BC049406|pid:none) Danio rerio DnaJ (Hsp40) homolog, ... 44 0.013
AL356332_8(AL356332|pid:none) Arabidopsis thaliana DNA chromosom... 44 0.013
(Q9H892) RecName: Full=Tetratricopeptide repeat protein 12; ... 44 0.013
EF445041_1(EF445041|pid:none) Homo sapiens tetratricopeptide rep... 44 0.013
BC032355_1(BC032355|pid:none) Homo sapiens tetratricopeptide rep... 44 0.013
AL021636_12(AL021636|pid:none) Arabidopsis thaliana DNA chromoso... 44 0.013
CT005272_8(CT005272|pid:none) Leishmania major strain Friedlin, ... 44 0.013
CP001096_4604(CP001096|pid:none) Rhodopseudomonas palustris TIE-... 44 0.013
BC167184_1(BC167184|pid:none) Synthetic construct Mus musculus c... 44 0.013
CS185615_1(CS185615|pid:none) Sequence 98 from Patent EP1591448. 44 0.013
AK292331_1(AK292331|pid:none) Homo sapiens cDNA FLJ78626 complet... 44 0.013
CP000780_789(CP000780|pid:none) Candidatus Methanoregula boonei ... 43 0.017
AP002745_4(AP002745|pid:none) Oryza sativa Japonica Group genomi... 43 0.017
BT048743_1(BT048743|pid:none) Salmo salar clone ssal-evf-554-032... 43 0.017
CP001330_179(CP001330|pid:none) Micromonas sp. RCC299 chromosome... 43 0.017
(Q84XU2) RecName: Full=Serine/threonine protein phosphatase 5; ... 43 0.017
CP000581_484(CP000581|pid:none) Ostreococcus lucimarinus CCE9901... 43 0.017
(Q84K11) RecName: Full=Serine/threonine protein phosphatase 5; ... 43 0.017
CU640366_573(CU640366|pid:none) Podospora anserina genomic DNA c... 43 0.017
CP001324_114(CP001324|pid:none) Micromonas sp. RCC299 chromosome... 43 0.017
AE010299_1324(AE010299|pid:none) Methanosarcina acetivorans str.... 43 0.017
BT051839_1(BT051839|pid:none) Medicago truncatula clone MTYF5_F6... 43 0.017
CT573073_4(CT573073|pid:none) Kuenenia stuttgartiensis genome fr... 43 0.017
CP000584_507(CP000584|pid:none) Ostreococcus lucimarinus CCE9901... 43 0.017
AY339892_1(AY339892|pid:none) Gallus gallus aryl-hydrocarbon rec... 43 0.017
BC167892_1(BC167892|pid:none) Xenopus tropicalis cDNA clone MGC:... 43 0.017
AP008981_1831(AP008981|pid:none) Orientia tsutsugamushi str. Ike... 43 0.022
AC155341_10(AC155341|pid:none) Brassica rapa subsp. pekinensis c... 43 0.022
AY816102_1(AY816102|pid:none) Schistosoma japonicum SJCHGC06661 ... 43 0.022
EF147519_1(EF147519|pid:none) Populus trichocarpa clone WS0123_C... 43 0.022
(Q8IWX7) RecName: Full=Protein unc-45 homolog B; Short=... 43 0.022
CP000350_53(CP000350|pid:none) Leptospira borgpetersenii serovar... 43 0.022
AK081821_1(AK081821|pid:none) Mus musculus 16 days embryo head c... 43 0.022
CP000867_1755(CP000867|pid:none) Methanococcus maripaludis C6, c... 43 0.022
(Q8CGY6) RecName: Full=Protein unc-45 homolog B; Short=... 43 0.022
CR380954_353(CR380954|pid:none) Candida glabrata strain CBS138 c... 43 0.022
AK052294_1(AK052294|pid:none) Mus musculus 13 days embryo heart ... 43 0.022
CP000743_736(CP000743|pid:none) Methanococcus aeolicus Nankai-3,... 43 0.022
AF512999_1(AF512999|pid:none) Medicago sativa TPR1 (tpr1) mRNA, ... 43 0.022
AB013395_9(AB013395|pid:none) Arabidopsis thaliana genomic DNA, ... 43 0.022
CP000591_239(CP000591|pid:none) Ostreococcus lucimarinus CCE9901... 43 0.022
BC084585_1(BC084585|pid:none) Mus musculus unc-45 homolog B (C. ... 43 0.022
AE010299_3605(AE010299|pid:none) Methanosarcina acetivorans str.... 43 0.022
CR954214_299(CR954214|pid:none) Ostreococcus tauri strain OTTH05... 43 0.022
(Q4R8N7) RecName: Full=Stress-induced-phosphoprotein 1; ... 43 0.022
AE017343_691(AE017343|pid:none) Cryptococcus neoformans var. neo... 43 0.022
CP000867_1772(CP000867|pid:none) Methanococcus maripaludis C6, c... 42 0.028
BC039299_1(BC039299|pid:none) Homo sapiens stress-induced-phosph... 42 0.028
CP001357_1899(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 42 0.028
(P15705) RecName: Full=Heat shock protein STI1; &A32567(A32567;... 42 0.028
AB170903_1(AB170903|pid:none) Macaca fascicularis brain cDNA clo... 42 0.028
AM502237_144(AM502237|pid:none) Leishmania infantum chromosome 19. 42 0.028
BT080661_1(BT080661|pid:none) Caligus clemensi clone ccle-evs-51... 42 0.028
AK168181_1(AK168181|pid:none) Mus musculus CRL-1722 L5178Y-R cDN... 42 0.028
(Q60864) RecName: Full=Stress-induced-phosphoprotein 1; ... 42 0.028
BC003794_1(BC003794|pid:none) Mus musculus stress-induced phosph... 42 0.028
(O35814) RecName: Full=Stress-induced-phosphoprotein 1; ... 42 0.028
(O54981) RecName: Full=Stress-induced-phosphoprotein 1; ... 42 0.028
(P31948) RecName: Full=Stress-induced-phosphoprotein 1; ... 42 0.028
AC008007_20(AC008007|pid:none) Genomic sequence for Arabidopsis ... 42 0.028
CP000099_2186(CP000099|pid:none) Methanosarcina barkeri str. Fus... 42 0.028
CP001287_3153(CP001287|pid:none) Cyanothece sp. PCC 8801, comple... 42 0.028
CP000962_645(CP000962|pid:none) Clostridium botulinum A3 str. Lo... 42 0.028
CP000678_1786(CP000678|pid:none) Methanobrevibacter smithii ATCC... 42 0.028
AK075988_1(AK075988|pid:none) Mus musculus 10 days embryo whole ... 42 0.028
AL606459_14(AL606459|pid:none) Oryza sativa genomic DNA, chromos... 42 0.028
CP000048_516(CP000048|pid:none) Borrelia hermsii DAH, complete g... 42 0.028
CP001251_1558(CP001251|pid:none) Dictyoglomus turgidum DSM 6724,... 42 0.028
AM270403_11(AM270403|pid:none) Aspergillus niger contig An18c011... 42 0.028
AB028954_1(AB028954|pid:none) Homo sapiens mRNA for KIAA1031 pro... 42 0.037
BC048884_1(BC048884|pid:none) Danio rerio zinc finger CCCH-type ... 42 0.037
CP000678_1787(CP000678|pid:none) Methanobrevibacter smithii ATCC... 42 0.037
AK072598_1(AK072598|pid:none) Oryza sativa Japonica Group cDNA c... 42 0.037
AM920428_237(AM920428|pid:none) Penicillium chrysogenum Wisconsi... 42 0.037
CP000312_1259(CP000312|pid:none) Clostridium perfringens SM101, ... 42 0.037
(Q11004) RecName: Full=40 kDa peptidyl-prolyl cis-trans isomeras... 42 0.037
BC074059_1(BC074059|pid:none) Danio rerio small glutamine-rich t... 42 0.037
CP000239_2217(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com... 42 0.037
CP000828_559(CP000828|pid:none) Acaryochloris marina MBIC11017, ... 42 0.037
BC153490_1(BC153490|pid:none) Danio rerio zinc finger CCCH-type ... 42 0.037
EU969755_1(EU969755|pid:none) Zea mays clone 335208 unknown mRNA. 42 0.037
EF678066_1(EF678066|pid:none) Picea sitchensis clone WS02821_L24... 42 0.037
AM494475_2002(AM494475|pid:none) Orientia tsutsugamushi Boryong ... 42 0.037
AC084406_2(AC084406|pid:none) Oryza sativa chromosome 3 BAC OSJN... 42 0.037
AC137078_23(AC137078|pid:none) Medicago truncatula clone mth2-10... 42 0.048
AK129268_1(AK129268|pid:none) Mus musculus premature mRNA for mK... 42 0.048
AM778949_47(AM778949|pid:none) Microcystis aeruginosa PCC 7806 g... 42 0.048
CP000083_504(CP000083|pid:none) Colwellia psychrerythraea 34H, c... 42 0.048
CP000585_363(CP000585|pid:none) Ostreococcus lucimarinus CCE9901... 42 0.048
CP000745_130(CP000745|pid:none) Methanococcus maripaludis C7, co... 42 0.048
CP000393_2888(CP000393|pid:none) Trichodesmium erythraeum IMS101... 42 0.048
AJ721018_1(AJ721018|pid:none) Gallus gallus mRNA for hypothetica... 42 0.048
AB298186_3(AB298186|pid:none) Triticum aestivum genes for P450, ... 42 0.048
DQ286571_1(DQ286571|pid:none) Sus scrofa CMYA4 mRNA, complete cds. 42 0.048
BC079980_1(BC079980|pid:none) Xenopus laevis MGC80931 protein, m... 42 0.048
AE013599_3921(AE013599|pid:none) Drosophila melanogaster chromos... 42 0.048
BT061922_1(BT061922|pid:none) Zea mays full-length cDNA clone ZM... 42 0.048
CP001329_135(CP001329|pid:none) Micromonas sp. RCC299 chromosome... 41 0.063
(Q3ZJ63) RecName: Full=Photosystem I assembly protein ycf3; &AY... 41 0.063
FJ461780_16(FJ461780|pid:none) Arabidopsis arenosa clone AaFLC_B... 41 0.063
CP000961_4435(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 41 0.063
BC121245_1(BC121245|pid:none) Xenopus tropicalis tetratricopepti... 41 0.063
F84855(F84855)hypothetical protein At2g42580 [imported] - Arabid... 41 0.063
AC007087_14(AC007087|pid:none) Arabidopsis thaliana chromosome 2... 41 0.063
AM445529_1(AM445529|pid:none) Vitis vinifera contig VV78X008531.... 41 0.063
(Q9SRS9) RecName: Full=E3 ubiquitin-protein ligase CHIP; ... 41 0.063
BT070956_1(BT070956|pid:none) Picea sitchensis clone WS02761_M20... 41 0.063
CP001357_2477(CP001357|pid:none) Brachyspira hyodysenteriae WA1,... 41 0.063
AF163834_1(AF163834|pid:none) Dictyostelium discoideum developme... 41 0.082
CP001577_128(CP001577|pid:none) Micromonas sp. RCC299 chromosome... 41 0.082
AK025561_1(AK025561|pid:none) Homo sapiens cDNA: FLJ21908 fis, c... 41 0.082
AC079736_9(AC079736|pid:none) Oryza sativa (japonica cultivar-gr... 41 0.082
BC126580_1(BC126580|pid:none) Bos taurus DnaJ (Hsp40) homolog, s... 41 0.082
BT045931_1(BT045931|pid:none) Salmo salar clone ssal-rgf-537-001... 41 0.082
(Q86TZ1) RecName: Full=Tetratricopeptide repeat protein 6; ... 41 0.082
CR382133_498(CR382133|pid:none) Debaryomyces hansenii strain CBS... 41 0.082
AY144974_1(AY144974|pid:none) Saccharomyces castellii clone Cont... 41 0.082
CP000312_335(CP000312|pid:none) Clostridium perfringens SM101, c... 41 0.082
CP000655_1818(CP000655|pid:none) Polynucleobacter necessarius su... 41 0.082
BC014342_1(BC014342|pid:none) Homo sapiens tetratricopeptide rep... 41 0.082
CT005250_49(CT005250|pid:none) Leishmania major strain Friedlin,... 41 0.082
CP001089_2309(CP001089|pid:none) Geobacter lovleyi SZ, complete ... 41 0.082
(A1Z8E9) RecName: Full=Bardet-Biedl syndrome 4 protein homolog; ... 41 0.082
CU928169_493(CU928169|pid:none) Kluyveromyces thermotolerans str... 41 0.082
CP001056_1798(CP001056|pid:none) Clostridium botulinum B str. Ek... 41 0.082
AP007255_2357(AP007255|pid:none) Magnetospirillum magneticum AMB... 41 0.082
CP001291_2597(CP001291|pid:none) Cyanothece sp. PCC 7424, comple... 41 0.082
CP000780_787(CP000780|pid:none) Candidatus Methanoregula boonei ... 41 0.082
(O43765) RecName: Full=Small glutamine-rich tetratricopeptide re... 40 0.11
CP001196_3656(CP001196|pid:none) Oligotropha carboxidovorans OM5... 40 0.11
DQ132805_1(DQ132805|pid:none) Candida albicans Sti1 (STI1) gene,... 40 0.11
AM910996_294(AM910996|pid:none) Plasmodium knowlesi strain H chr... 40 0.11
BC075517_1(BC075517|pid:none) Xenopus tropicalis DnaJ (Hsp40) ho... 40 0.11
CP000099_2958(CP000099|pid:none) Methanosarcina barkeri str. Fus... 40 0.11
AE001437_1052(AE001437|pid:none) Clostridium acetobutylicum ATCC... 40 0.11
AY894091_1(AY894091|pid:none) Synthetic construct Homo sapiens c... 40 0.11
AB169229_1(AB169229|pid:none) Macaca fascicularis testis cDNA, c... 40 0.11
AE010299_1824(AE010299|pid:none) Methanosarcina acetivorans str.... 40 0.11
CP000492_1779(CP000492|pid:none) Chlorobium phaeobacteroides DSM... 40 0.11
CT005267_321(CT005267|pid:none) Leishmania major strain Friedlin... 40 0.11
AM502248_339(AM502248|pid:none) Leishmania infantum chromosome 30. 40 0.11
AY389680_1(AY389680|pid:none) Hyacinthus orientalis peptidylprol... 40 0.11
(O60184) RecName: Full=General transcriptional corepressor ssn6;... 40 0.11
AE010299_2751(AE010299|pid:none) Methanosarcina acetivorans str.... 40 0.11
BC080138_1(BC080138|pid:none) Xenopus tropicalis CMYA4 protein, ... 40 0.11
BX548175_1167(BX548175|pid:none) Prochlorococcus marinus MIT9313... 40 0.11
CP000099_2842(CP000099|pid:none) Methanosarcina barkeri str. Fus... 40 0.11
AF305612_1(AF305612|pid:none) Borrelia burgdorferi strain pGau L... 40 0.11
CP001338_1693(CP001338|pid:none) Candidatus Methanosphaerula pal... 40 0.14
EU016647_22(EU016647|pid:none) Uncultured Group I marine crenarc... 40 0.14
CR954205_375(CR954205|pid:none) Ostreococcus tauri strain OTTH05... 40 0.14
EU005652_1(EU005652|pid:none) Bos taurus STIP1 homology and U-bo... 40 0.14
AM902287_1(AM902287|pid:none) Solanum lycopersicum mRNA for tetr... 40 0.14

>AJ720350_1(AJ720350|pid:none) Gallus gallus mRNA for hypothetical
protein, clone 15n8.
Length = 442

Score = 97.4 bits (241), Expect = 7e-19
Identities = 56/171 (32%), Positives = 98/171 (57%), Gaps = 2/171 (1%)
Frame = +1

Query: 574 RYKSDFQSGKQVKLS--PTSSEKLQKAFTYKEKGTDAFKKSDWKGAIFNYHCANNYVTGL 747
+Y+ +S ++ K S + EKL+++ KE+GT FK+ +K A Y ++
Sbjct: 237 QYEVKLKSFEKAKESWEMNTEEKLEQSCMVKERGTQYFKEGKYKRAALQYKKIVLWLEHE 296

Query: 748 MGLGDEEDTISKNLVLVLTNNIAICNMKLGKFKRSIELLDQVLKSDPNNVKALYRRGKCL 927
GL DEEDT +K+L L N+A+C++KL ++ +++E ++ L+ D +N K L+RRG+
Sbjct: 297 SGLSDEEDTKAKSLRLAAHLNLAMCHLKLKEYSQALENCNKALELDSSNEKGLFRRGEAH 356

Query: 928 VAEKEYIHAEEDLEKALTLTPNDKEIIAELKICRQKSNEFKKVEAKAYSKM 1080
+A ++ A D +K + L P++K +L C+QK E + E K Y+ M
Sbjct: 357 LAVNDFELARGDFQKVIQLYPSNKAAKVQLVTCQQKIREQHEKEKKMYANM 407

Lambda K H
0.316 0.132 0.364

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,170,532,900
Number of extensions: 18527762
Number of successful extensions: 69743
Number of sequences better than 10.0: 1110
Number of HSP's gapped: 69179
Number of HSP's successfully gapped: 1264
Length of query: 360
Length of database: 1,040,966,779
Length adjustment: 130
Effective length of query: 230
Effective length of database: 624,409,729
Effective search space: 143614237670
Effective search space used: 143614237670
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.50 gvh: 0.42 alm: 0.27 top: 0.80 tms: 0.07 mit: 0.20 mip: 0.02
nuc: 0.04 erl: 0.00 erm: 0.80 pox: 0.30 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.06 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 1.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

28.0 %: nuclear
24.0 %: mitochondrial
24.0 %: cytoplasmic
8.0 %: plasma membrane
8.0 %: endoplasmic reticulum
4.0 %: vesicles of secretory system
4.0 %: peroxisomal

>> prediction for Contig-U06144-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0