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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U06124-1
Contig ID Contig-U06124-1
Contig update 2002. 9.13
Contig sequence 
>Contig-U06124-1 (Contig-U06124-1Q) /CSM_Contig/Contig-U06124-1Q.Seq.d
GGTCATTCAAANCAATTACAACTCATTNTGCTCACTTCATTTCAAATCAT
GATGAACCAAGAGGTGCAAATTTCTTTGGTAGTTGGTGNAGATCTGATGC
TGCCGCTCTCATCACCTATACACTCCCTGGTTTACGTTTCTTTTGGTGGG
GTGATTTCCAAGGTTATTCCAACCAATTGGACGTCCATCTTAGGCGTGAA
CAATCTGAACCAGCTATCGATGATGCAATGGCATTCTATCAAACTTTAAC
CTCCATCGTTAGTGATCCAGTCTTTAAGAATGGTGAATTCACTTATTTAA
ATTGCACAAATGATCAAGAGAGTTGGAATTTAGTTGCCTACAAATGGACA
TACCAAAATGAACGTAGATTATGTGTTTTGAATTTCTCTGACCAACAAGG
TACTGGTAATATTATCTTGGATGATGCTGAACCAATGAATGGTAATGAAA
CTATCCCTGTCACTGATTTACTTTCCAATACTACCTATTATCGTTCTTCT
GAACAAATGAGAACAACTGGTCTCTATGTAATTATAAACTCTTGGTATGG
TCAAATTTTTAAATATTAAAATAAATAAATAGATTTTAATTTGAAAATAA
AAAAAAA
Gap no gap
Contig length 607
Chromosome number (1..6, M) 4
Chromosome length 5430582
Start point 4035843
End point 4035235
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 2
Link to clone list U06124
List of clone(s) 

est1=VFE728Z,1,461
est2=VSG832F,151,608
Translated Amino Acid sequence 
SFKXITTHXAHFISNHDEPRGANFFGSWXRSDAAALITYTLPGLRFFWWGDFQGYSNQLD
VHLRREQSEPAIDDAMAFYQTLTSIVSDPVFKNGEFTYLNCTNDQESWNLVAYKWTYQNE
RRLCVLNFSDQQGTGNIILDDAEPMNGNETIPVTDLLSNTTYYRSSEQMRTTGLYVIINS
WYGQIFKY*nk*idfnlkikk
Translated Amino Acid sequence (All Frames) 
Frame A:
ghsxqlqlixltsfqimmnqevqislvvgxdlmlplsspihslvyvsfggviskviptnw
tsilgvnnlnqlsmmqwhsikl*ppslviqslrmvnsli*iaqmikrvgi*lptnghtkm
nvdyvf*isltnkvlvilswmmlnq*mvmklslsliyfpilpiivllnk*eqlvsm*l*t
lgmvkflnikink*ili*k*kk


Frame B:
viqxnynsxcslhfks**tkrckflw*lvxi*ccrshhlytpwftfllvg*fprlfqpig
rps*a*ti*tsyr*cngilsnfnlhr**ssl*ew*ihlfklhk*srelefsclqmdipk*
t*imcfefl*ptryw*yylg*c*tnew**nypch*ftfqyyllsff*tnennwslcnykl
lvwsnf*ilk*inrf*fenkkk


Frame C:
SFKXITTHXAHFISNHDEPRGANFFGSWXRSDAAALITYTLPGLRFFWWGDFQGYSNQLD
VHLRREQSEPAIDDAMAFYQTLTSIVSDPVFKNGEFTYLNCTNDQESWNLVAYKWTYQNE
RRLCVLNFSDQQGTGNIILDDAEPMNGNETIPVTDLLSNTTYYRSSEQMRTTGLYVIINS
WYGQIFKY*nk*idfnlkikk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U06124-1 (Contig-U06124-1Q)
/CSM_Contig/Contig-U06124-1Q.Seq.d
         (607 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U06124-1 (Contig-U06124-1Q) /CSM_Contig/Conti...  1168  0.0
Contig-U05225-1 (Contig-U05225-1Q) /CSM_Contig/Conti...    44  2e-04
Contig-U05875-1 (Contig-U05875-1Q) /CSM_Contig/Conti...    42  7e-04
Contig-U13399-1 (Contig-U13399-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U04634-1 (Contig-U04634-1Q) /CSM_Contig/Conti...    40  0.003
Contig-U11407-1 (Contig-U11407-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U05180-1 (Contig-U05180-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U04082-1 (Contig-U04082-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U01577-1 (Contig-U01577-1Q) /CSM_Contig/Conti...    38  0.011
Contig-U14263-1 (Contig-U14263-1Q) /CSM_Contig/Conti...    36  0.042

>Contig-U06124-1 (Contig-U06124-1Q) /CSM_Contig/Contig-U06124-1Q.Seq.d
          Length = 607

 Score = 1168 bits (589), Expect = 0.0
 Identities = 598/598 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggtcattcaaancaattacaactcattntgctcacttcatttcaaatcatgatgaaccaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ggtcattcaaancaattacaactcattntgctcacttcatttcaaatcatgatgaaccaa 60

                                                                       
Query: 61  gaggtgcaaatttctttggtagttggtgnagatctgatgctgccgctctcatcacctata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gaggtgcaaatttctttggtagttggtgnagatctgatgctgccgctctcatcacctata 120

                                                                       
Query: 121 cactccctggtttacgtttcttttggtggggtgatttccaaggttattccaaccaattgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cactccctggtttacgtttcttttggtggggtgatttccaaggttattccaaccaattgg 180

                                                                       
Query: 181 acgtccatcttaggcgtgaacaatctgaaccagctatcgatgatgcaatggcattctatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acgtccatcttaggcgtgaacaatctgaaccagctatcgatgatgcaatggcattctatc 240

                                                                       
Query: 241 aaactttaacctccatcgttagtgatccagtctttaagaatggtgaattcacttatttaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaactttaacctccatcgttagtgatccagtctttaagaatggtgaattcacttatttaa 300

                                                                       
Query: 301 attgcacaaatgatcaagagagttggaatttagttgcctacaaatggacataccaaaatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attgcacaaatgatcaagagagttggaatttagttgcctacaaatggacataccaaaatg 360

                                                                       
Query: 361 aacgtagattatgtgttttgaatttctctgaccaacaaggtactggtaatattatcttgg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aacgtagattatgtgttttgaatttctctgaccaacaaggtactggtaatattatcttgg 420

                                                                       
Query: 421 atgatgctgaaccaatgaatggtaatgaaactatccctgtcactgatttactttccaata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgatgctgaaccaatgaatggtaatgaaactatccctgtcactgatttactttccaata 480

                                                                       
Query: 481 ctacctattatcgttcttctgaacaaatgagaacaactggtctctatgtaattataaact 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctacctattatcgttcttctgaacaaatgagaacaactggtctctatgtaattataaact 540

                                                                     
Query: 541 cttggtatggtcaaatttttaaatattaaaataaataaatagattttaatttgaaaat 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cttggtatggtcaaatttttaaatattaaaataaataaatagattttaatttgaaaat 598


>Contig-U05225-1 (Contig-U05225-1Q) /CSM_Contig/Contig-U05225-1Q.Seq.d
          Length = 326

 Score = 44.1 bits (22), Expect = 2e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 553 aaatttttaaatattaaaataaataa 578
           ||||||||||||||| ||||||||||
Sbjct: 284 aaatttttaaatatttaaataaataa 309


>Contig-U05875-1 (Contig-U05875-1Q) /CSM_Contig/Contig-U05875-1Q.Seq.d
          Length = 563

 Score = 42.1 bits (21), Expect = 7e-04
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 561 aaatattaaaataaataaata 581
           |||||||||||||||||||||
Sbjct: 491 aaatattaaaataaataaata 511


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,221
Number of Sequences: 6905
Number of extensions: 11221
Number of successful extensions: 2752
Number of sequences better than 10.0: 303
length of query: 607
length of database: 5,674,871
effective HSP length: 16
effective length of query: 591
effective length of database: 5,564,391
effective search space: 3288555081
effective search space used: 3288555081
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2008.11. 7
Homology vs DNA 
Query= Contig-U06124-1 (Contig-U06124-1Q) /CSM_Contig/Contig-U06124-1Q.Seq.d
         (607 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(BJ427986) Dictyostelium discoideum cDNA clone:ddv10h07, 3' ...   890   0.0    1
(AU266848) Dictyostelium discoideum vegetative cDNA clone:VS...   789   0.0    1
(AC146825) Otolemur garnettii clone CH256-69L12, WORKING DRA...    44   5.7    1
(AC146728) Otolemur garnettii clone CH256-232D9, WORKING DRA...    44   5.7    1
(CU469462) Zebrafish DNA sequence from clone DKEY-100O15 in ...    38   8.6    4

>(BJ427986) Dictyostelium discoideum cDNA clone:ddv10h07, 3' end,
           single read.
          Length = 461

 Score =  890 bits (449), Expect = 0.0
 Identities = 458/458 (100%)
 Strand = Plus / Minus


Query: 1   ggtcattcaaancaattacaactcattntgctcacttcatttcaaatcatgatgaaccaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ggtcattcaaancaattacaactcattntgctcacttcatttcaaatcatgatgaaccaa 402


Query: 61  gaggtgcaaatttctttggtagttggtgnagatctgatgctgccgctctcatcacctata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gaggtgcaaatttctttggtagttggtgnagatctgatgctgccgctctcatcacctata 342


Query: 121 cactccctggtttacgtttcttttggtggggtgatttccaaggttattccaaccaattgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cactccctggtttacgtttcttttggtggggtgatttccaaggttattccaaccaattgg 282


Query: 181 acgtccatcttaggcgtgaacaatctgaaccagctatcgatgatgcaatggcattctatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 acgtccatcttaggcgtgaacaatctgaaccagctatcgatgatgcaatggcattctatc 222


Query: 241 aaactttaacctccatcgttagtgatccagtctttaagaatggtgaattcacttatttaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aaactttaacctccatcgttagtgatccagtctttaagaatggtgaattcacttatttaa 162


Query: 301 attgcacaaatgatcaagagagttggaatttagttgcctacaaatggacataccaaaatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 attgcacaaatgatcaagagagttggaatttagttgcctacaaatggacataccaaaatg 102


Query: 361 aacgtagattatgtgttttgaatttctctgaccaacaaggtactggtaatattatcttgg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 aacgtagattatgtgttttgaatttctctgaccaacaaggtactggtaatattatcttgg 42


Query: 421 atgatgctgaaccaatgaatggtaatgaaactatccct 458
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 41  atgatgctgaaccaatgaatggtaatgaaactatccct 4

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 547,069,900
Number of extensions: 28460030
Number of successful extensions: 1983423
Number of sequences better than 10.0: 5
Length of query: 607
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 584
Effective length of database: 93,106,754,628
Effective search space: 54374344702752
Effective search space used: 54374344702752
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 6.21
Homology vs Protein 
Query= Contig-U06124-1 (Contig-U06124-1Q) /CSM_Contig/Contig-U06124-1Q.Seq.d
         (607 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CP000360_4074(CP000360|pid:none) Acidobacteria bacterium Ellin34...    97   3e-19
CP001287_2033(CP001287|pid:none) Cyanothece sp. PCC 8801, comple...    94   2e-18
CP000473_4452(CP000473|pid:none) Solibacter usitatus Ellin6076, ...    91   2e-17
CP000562_384(CP000562|pid:none) Methanoculleus marisnigri JR1, c...    88   2e-16
AM236080_62(AM236080|pid:none) Rhizobium leguminosarum bv. vicia...    82   2e-14
AM419455_1(AM419455|pid:none) Eudiplodinium maggii mRNA for amyl...    78   2e-13
CP001108_1636(CP001108|pid:none) Prosthecochloris aestuarii DSM ...    60   4e-08
CP001097_1660(CP001097|pid:none) Chlorobium limicola DSM 245, co...    59   8e-08
CP000492_651(CP000492|pid:none) Chlorobium phaeobacteroides DSM ...    57   4e-07
CP000096_448(CP000096|pid:none) Pelodictyon luteolum DSM 273, co...    56   7e-07
CP000607_493(CP000607|pid:none) Chlorobium phaeovibrioides DSM 2...    55   2e-06
CP001099_1658(CP001099|pid:none) Chlorobaculum parvum NCIB 8327,...    49   1e-04
AE006470_339(AE006470|pid:none) Chlorobium tepidum TLS, complete...    45   0.001
CP000934_3178(CP000934|pid:none) Cellvibrio japonicus Ueda107, c...    43   0.006
AY596297_2084(AY596297|pid:none) Haloarcula marismortui ATCC 430...    43   0.008
CP000686_14(CP000686|pid:none) Roseiflexus sp. RS-1, complete ge...    42   0.010
(Q08806) RecName: Full=Alpha-amylase 2;          EC=3.2.1.1; Alt...    42   0.010
CP001101_1904(CP001101|pid:none) Chlorobium phaeobacteroides BS1...    41   0.023
CP000142_3142(CP000142|pid:none) Pelobacter carbinolicus DSM 238...    40   0.050
AE000512_1623(AE000512|pid:none) Thermotoga maritima MSB8, compl...    40   0.050
CP001364_744(CP001364|pid:none) Chloroflexus sp. Y-400-fl, compl...    40   0.066
CP000969_1161(CP000969|pid:none) Thermotoga sp. RQ2, complete ge...    40   0.066
CP001472_939(CP001472|pid:none) Acidobacterium capsulatum ATCC 5...    40   0.066
AE014134_2193(AE014134|pid:none) Drosophila melanogaster chromos...    39   0.11
BT044297_1(BT044297|pid:none) Drosophila melanogaster FI06514 fu...    39   0.11
BT022819_1(BT022819|pid:none) Drosophila melanogaster IP13189 fu...    39   0.11
CP000482_507(CP000482|pid:none) Pelobacter propionicus DSM 2379,...    38   0.19
(O16098) RecName: Full=Maltase 1;          EC=3.2.1.20; Flags: P...    38   0.19
CP000698_3527(CP000698|pid:none) Geobacter uraniireducens Rf4, c...    38   0.25
CP000679_382(CP000679|pid:none) Caldicellulosiruptor saccharolyt...    37   0.33
DQ304536_1(DQ304536|pid:none) Pseudomonas mesoacidophila sucrose...    37   0.43
A45858_1(A45858|pid:none) Sequence 13 from Patent WO9520047.  &C...    37   0.43
AE017180_598(AE017180|pid:none) Geobacter sulfurreducens PCA, co...    36   0.95
AE017308_63(AE017308|pid:none) Mycoplasma mobile 163K complete g...    35   1.2
CP000360_1489(CP000360|pid:none) Acidobacteria bacterium Ellin34...    35   1.6
CP000360_2515(CP000360|pid:none) Acidobacteria bacterium Ellin34...    35   1.6
CP001124_677(CP001124|pid:none) Geobacter bemidjiensis Bem, comp...    35   2.1
DQ489736_665(DQ489736|pid:none) Leuconostoc citreum KM20, comple...    35   2.1
DQ417354_1(DQ417354|pid:none) Clostridium botulinum neurotoxin t...    34   2.8
CP000934_3194(CP000934|pid:none) Cellvibrio japonicus Ueda107, c...    34   2.8
EF028395_1(EF028395|pid:none) Clostridium botulinum strain B162 ...    34   2.8
AE005672_1304(AE005672|pid:none) Streptococcus pneumoniae TIGR4,...    34   2.8
EF051571_1(EF051571|pid:none) Clostridium botulinum strain B164 ...    34   2.8
CP001033_1371(CP001033|pid:none) Streptococcus pneumoniae CGSP14...    34   2.8
CP000918_1339(CP000918|pid:none) Streptococcus pneumoniae 70585,...    34   2.8
CP000930_648(CP000930|pid:none) Heliobacterium modesticaldum Ice...    34   3.6
CP001037_240(CP001037|pid:none) Nostoc punctiforme PCC 73102, co...    34   3.6
CP000568_788(CP000568|pid:none) Clostridium thermocellum ATCC 27...    34   3.6
BX950851_1829(BX950851|pid:none) Erwinia carotovora subsp. atros...    33   4.7
CP000919_1218(CP000919|pid:none) Streptococcus pneumoniae JJA, c...    33   4.7
EU427451_1(EU427451|pid:none) Uncultured bacterium clone Amy132 ...    33   4.7
AE017226_2659(AE017226|pid:none) Treponema denticola ATCC 35405,...    33   4.7
CP000920_1282(CP000920|pid:none) Streptococcus pneumoniae P1031,...    33   4.7
AE014134_2195(AE014134|pid:none) Drosophila melanogaster chromos...    33   4.7
AE017261_806(AE017261|pid:none) Picrophilus torridus DSM 9790, c...    33   4.8
U04956_1(U04956|pid:none) Streptococcus bovis amylase gene, comp...    33   6.1
(O16099) RecName: Full=Maltase 2;          EC=3.2.1.20; Flags: P...    33   6.1
S01313(S01313) alpha-amylase (EC 3.2.1.1) C - Dictyoglomus therm...    33   6.1
CP000927_302(CP000927|pid:none) Caulobacter sp. K31, complete ge...    33   6.1
CP000139_3656(CP000139|pid:none) Bacteroides vulgatus ATCC 8482,...    33   6.2
A45846_1(A45846|pid:none) Sequence 1 from Patent WO9520047.  &CQ...    33   8.0
AY223549_1(AY223549|pid:none) Pantoea dispersa sucrose isomerase...    33   8.0
AY227804_1(AY227804|pid:none) Raoultella planticola sucrose isom...    33   8.0
CP000023_1415(CP000023|pid:none) Streptococcus thermophilus LMG ...    33   8.0
S15713(S15713) alpha-amylase (EC 3.2.1.1) - Bacillus circulans  ...    33   8.0
AY125982_1(AY125982|pid:none) Klebsiella sp. NK33-98-8 alpha-glu...    33   8.0
CP000419_1260(CP000419|pid:none) Streptococcus thermophilus LMD-...    33   8.0

>CP000360_4074(CP000360|pid:none) Acidobacteria bacterium Ellin345,
           complete genome.
          Length = 513

 Score = 97.4 bits (241), Expect = 3e-19
 Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 8/186 (4%)
 Frame = +3

Query: 30  AHFISNHDEPR-GANFFGSWXRSDAAALITYTLPGLRFFWWGDFQGYSNQLDVHLRREQS 206
           A F+ NHDEPR  A F     R  AAA+ITY  PGLRFF  G F+G   +L VHL R
Sbjct: 331 ARFLENHDEPRVAATFTPEMHR--AAAIITYLCPGLRFFHDGQFEGRVKRLSVHLGRRPE 388

Query: 207 EPAIDDAMAFYQTLTSIVSDPVFKNGEFTYLNCTNDQES-W---NLVAYKWTYQNERR-L 371
           E   +   AFYQ L   + +P  ++G++  LN T    S W   + V + W    E   L
Sbjct: 389 ESTNESIRAFYQQLLKCIHEPAIRDGQWQLLNATPAWVSNWTFESFVCFSWQADGELPFL 448

Query: 372 CVLNFSDQQGTGNIILDDAEPMN--GNETIPVTDLLSNTTYYRSSEQMRTTGLYVIINSW 545
            V+N+SD Q    + L    P +   + ++ + DL+ +  Y R  +++ + GLY+   +W
Sbjct: 449 VVVNYSDHQSQCYLQL----PFDTLRSHSVSLQDLMGSAIYERVGDELLSRGLYLDTPAW 504

Query: 546 YGQIFK 563
              +FK
Sbjct: 505 GFHVFK 510

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,091,936,674
Number of extensions: 23915273
Number of successful extensions: 53024
Number of sequences better than 10.0: 67
Number of HSP's gapped: 52945
Number of HSP's successfully gapped: 68
Length of query: 202
Length of database: 1,040,966,779
Length adjustment: 122
Effective length of query: 80
Effective length of database: 650,044,009
Effective search space: 52003520720
Effective search space used: 52003520720
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)
PSORT 

 psg: 0.80  gvh: 0.41  alm: 0.46  top: 0.53  tms: 0.00  mit: 0.34  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 36.0 %: nuclear
	 32.0 %: cytoplasmic
	 20.0 %: cytoskeletal
	  8.0 %: mitochondrial
	  4.0 %: peroxisomal

>> prediction for Contig-U06124-1 is nuc
VS (DIR, S) 1
VH (FL, L) 0
VF (FL, S) 1
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0