Homology vs DNA |
Query= Contig-U05942-1 (Contig-U05942-1Q) /CSM_Contig/Contig-U05942-1Q.Seq.d (1110 letters)
Database: ddbj_A 92,845,959 sequences; 95,242,211,685 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(BJ428787) Dictyostelium discoideum cDNA clone:ddv1b07, 3' e... 1360 0.0 1 (BJ430144) Dictyostelium discoideum cDNA clone:ddv6a08, 3' e... 1289 0.0 2 (BJ434331) Dictyostelium discoideum cDNA clone:ddv16f15, 3' ... 1287 0.0 2 (BJ428966) Dictyostelium discoideum cDNA clone:ddv1j24, 3' e... 1259 0.0 2 (BJ428833) Dictyostelium discoideum cDNA clone:ddv1l12, 3' e... 1257 0.0 3 (BJ428747) Dictyostelium discoideum cDNA clone:ddv1h03, 3' e... 1253 0.0 2 (BJ428893) Dictyostelium discoideum cDNA clone:ddv1i16, 3' e... 1245 0.0 2 (BJ429284) Dictyostelium discoideum cDNA clone:ddv2n24, 3' e... 1241 0.0 2 (BJ436186) Dictyostelium discoideum cDNA clone:ddv30d10, 3' ... 1239 0.0 2 (BJ436171) Dictyostelium discoideum cDNA clone:ddv30p06, 3' ... 1237 0.0 2 (BJ429266) Dictyostelium discoideum cDNA clone:ddv2k22, 3' e... 1231 0.0 3 (BJ436335) Dictyostelium discoideum cDNA clone:ddv30h20, 3' ... 1217 0.0 2 (BJ435410) Dictyostelium discoideum cDNA clone:ddv27e05, 3' ... 1213 0.0 3 (BJ433772) Dictyostelium discoideum cDNA clone:ddv22k22, 3' ... 1211 0.0 2 (BJ434885) Dictyostelium discoideum cDNA clone:ddv25d07, 3' ... 1197 0.0 3 (BJ429532) Dictyostelium discoideum cDNA clone:ddv3i19, 3' e... 1195 0.0 1 (AU267108) Dictyostelium discoideum vegetative cDNA clone:VS... 1193 0.0 2 (AU052226) Dictyostelium discoideum slug cDNA, clone SLA277. 1193 0.0 3 (AU039436) Dictyostelium discoideum slug cDNA, clone SLH783. 1193 0.0 2 (AU039424) Dictyostelium discoideum slug cDNA, clone SLH759. 1193 0.0 2 (BJ437663) Dictyostelium discoideum cDNA clone:ddv34p23, 3' ... 1193 0.0 3 (BJ435939) Dictyostelium discoideum cDNA clone:ddv29d06, 3' ... 1193 0.0 3 (BJ435689) Dictyostelium discoideum cDNA clone:ddv27m20, 3' ... 1193 0.0 3 (BJ435687) Dictyostelium discoideum cDNA clone:ddv27l20, 3' ... 1193 0.0 3 (BJ435678) Dictyostelium discoideum cDNA clone:ddv27j22, 3' ... 1193 0.0 3 (BJ435513) Dictyostelium discoideum cDNA clone:ddv27j10, 3' ... 1193 0.0 3 (BJ434483) Dictyostelium discoideum cDNA clone:ddv24b04, 3' ... 1193 0.0 4 (BJ434078) Dictyostelium discoideum cDNA clone:ddv23g22, 3' ... 1193 0.0 4 (BJ433115) Dictyostelium discoideum cDNA clone:ddv20g21, 3' ... 1193 0.0 2 (BJ433011) Dictyostelium discoideum cDNA clone:ddv20b18, 3' ... 1193 0.0 4 (BJ432739) Dictyostelium discoideum cDNA clone:ddv19j17, 3' ... 1193 0.0 2 (BJ432698) Dictyostelium discoideum cDNA clone:ddv19p11, 3' ... 1193 0.0 3 (BJ432606) Dictyostelium discoideum cDNA clone:ddv19n03, 3' ... 1193 0.0 3 (BJ432567) Dictyostelium discoideum cDNA clone:ddv19g03, 3' ... 1193 0.0 3 (BJ432529) Dictyostelium discoideum cDNA clone:ddv18p19, 3' ... 1193 0.0 4 (BJ432363) Dictyostelium discoideum cDNA clone:ddv18a13, 3' ... 1193 0.0 4 (BJ432108) Dictyostelium discoideum cDNA clone:ddv17l18, 3' ... 1193 0.0 3 (BJ432017) Dictyostelium discoideum cDNA clone:ddv17h11, 3' ... 1193 0.0 3 (BJ432000) Dictyostelium discoideum cDNA clone:ddv17e08, 3' ... 1193 0.0 3 (BJ431271) Dictyostelium discoideum cDNA clone:ddv13e15, 3' ... 1193 0.0 3 (BJ430581) Dictyostelium discoideum cDNA clone:ddv7d24, 3' e... 1193 0.0 3 (BJ430550) Dictyostelium discoideum cDNA clone:ddv7m18, 3' e... 1193 0.0 3 (BJ430410) Dictyostelium discoideum cDNA clone:ddv7m02, 3' e... 1193 0.0 3 (BJ430386) Dictyostelium discoideum cDNA clone:ddv7g03, 3' e... 1193 0.0 3 (BJ430120) Dictyostelium discoideum cDNA clone:ddv6l05, 3' e... 1193 0.0 3 (BJ430081) Dictyostelium discoideum cDNA clone:ddv6c04, 3' e... 1193 0.0 3 (BJ429648) Dictyostelium discoideum cDNA clone:ddv4l07, 3' e... 1193 0.0 3 (BJ429234) Dictyostelium discoideum cDNA clone:ddv2e20, 3' e... 1193 0.0 2 (BJ429197) Dictyostelium discoideum cDNA clone:ddv2m18, 3' e... 1193 0.0 3 (BJ428520) Dictyostelium discoideum cDNA clone:ddv12d11, 3' ... 1193 0.0 3 (BJ428499) Dictyostelium discoideum cDNA clone:ddv12n03, 3' ... 1193 0.0 3 (BJ428454) Dictyostelium discoideum cDNA clone:ddv12b05, 3' ... 1193 0.0 3 (BJ428441) Dictyostelium discoideum cDNA clone:ddv11o23, 3' ... 1193 0.0 3 (BJ428388) Dictyostelium discoideum cDNA clone:ddv11b21, 3' ... 1193 0.0 4 (BJ428340) Dictyostelium discoideum cDNA clone:ddv11g18, 3' ... 1193 0.0 3 (BJ428283) Dictyostelium discoideum cDNA clone:ddv11j11, 3' ... 1193 0.0 3 (BJ428255) Dictyostelium discoideum cDNA clone:ddv11d12, 3' ... 1193 0.0 3 (BJ428234) Dictyostelium discoideum cDNA clone:ddv11p02, 3' ... 1193 0.0 3 (BJ428160) Dictyostelium discoideum cDNA clone:ddv10o23, 3' ... 1193 0.0 2 (BJ377854) Dictyostelium discoideum cDNA clone:ddc26n02, 3' ... 1193 0.0 3 (BJ346913) Dictyostelium discoideum cDNA clone:dda25c17, 3' ... 1193 0.0 4 (BJ429401) Dictyostelium discoideum cDNA clone:ddv3i09, 3' e... 1189 0.0 3 (AU039929) Dictyostelium discoideum slug cDNA, clone SLG768. 1187 0.0 2 (AU033650) Dictyostelium discoideum slug cDNA, clone SLB269. 1187 0.0 2 (BJ436281) Dictyostelium discoideum cDNA clone:ddv30m15, 3' ... 1187 0.0 3 (BJ436015) Dictyostelium discoideum cDNA clone:ddv29p09, 3' ... 1187 0.0 3 (AU034324) Dictyostelium discoideum slug cDNA, clone SLC690. 1185 0.0 2 (AU034318) Dictyostelium discoideum slug cDNA, clone SLC676. 1185 0.0 2 (BJ435192) Dictyostelium discoideum cDNA clone:ddv26j10, 3' ... 1185 0.0 2 (BJ434312) Dictyostelium discoideum cDNA clone:ddv16b18, 3' ... 1185 0.0 3 (BJ433871) Dictyostelium discoideum cDNA clone:ddv23o03, 3' ... 1185 0.0 4 (BJ431882) Dictyostelium discoideum cDNA clone:ddv15m19, 3' ... 1185 0.0 5 (BJ431492) Dictyostelium discoideum cDNA clone:ddv14j10, 3' ... 1185 0.0 3 (BJ431467) Dictyostelium discoideum cDNA clone:ddv14c12, 3' ... 1185 0.0 3 (BJ430932) Dictyostelium discoideum cDNA clone:ddv9f09, 3' e... 1185 0.0 4 (BJ430805) Dictyostelium discoideum cDNA clone:ddv8i22, 3' e... 1185 0.0 3 (BJ430531) Dictyostelium discoideum cDNA clone:ddv7h13, 3' e... 1185 0.0 3 (BJ430499) Dictyostelium discoideum cDNA clone:ddv7p10, 3' e... 1185 0.0 3 (BJ430155) Dictyostelium discoideum cDNA clone:ddv6c12, 3' e... 1185 0.0 3 (BJ430069) Dictyostelium discoideum cDNA clone:ddv6a02, 3' e... 1185 0.0 3 (BJ428585) Dictyostelium discoideum cDNA clone:ddv12b17, 3' ... 1185 0.0 4 (BJ428532) Dictyostelium discoideum cDNA clone:ddv12g09, 3' ... 1185 0.0 3 (BJ402555) Dictyostelium discoideum cDNA clone:dds17f12, 3' ... 1185 0.0 4 (BJ436298) Dictyostelium discoideum cDNA clone:ddv30p17, 3' ... 1181 0.0 3 (BJ429177) Dictyostelium discoideum cDNA clone:ddv2i16, 3' e... 1181 0.0 3 (AU052227) Dictyostelium discoideum slug cDNA, clone SLA278. 1179 0.0 2 (BJ434494) Dictyostelium discoideum cDNA clone:ddv24d06, 3' ... 1179 0.0 2 (BJ428348) Dictyostelium discoideum cDNA clone:ddv11i17, 3' ... 1179 0.0 2 (AC115612) Dictyostelium discoideum chromosome 2 map 6245135... 1178 0.0 4 (BJ433553) Dictyostelium discoideum cDNA clone:ddv22b09, 3' ... 1178 0.0 3 (BJ433101) Dictyostelium discoideum cDNA clone:ddv20d24, 3' ... 1178 0.0 2 (BJ433724) Dictyostelium discoideum cDNA clone:ddv22b23, 3' ... 1176 0.0 2 (BJ432668) Dictyostelium discoideum cDNA clone:ddv19k07, 3' ... 1176 0.0 1 (BJ433774) Dictyostelium discoideum cDNA clone:ddv22k24, 3' ... 1174 0.0 2 (BJ432284) Dictyostelium discoideum cDNA clone:ddv18b09, 3' ... 1174 0.0 3 (BJ428531) Dictyostelium discoideum cDNA clone:ddv12g07, 3' ... 1174 0.0 2 (BJ431352) Dictyostelium discoideum cDNA clone:ddv13i22, 3' ... 1170 0.0 2 (BJ430221) Dictyostelium discoideum cDNA clone:ddv6b15, 3' e... 1170 0.0 2 (BJ435350) Dictyostelium discoideum cDNA clone:ddv26i22, 3' ... 1168 0.0 2 (BJ434416) Dictyostelium discoideum cDNA clone:ddv16e23, 3' ... 1168 0.0 4
>(BJ428787) Dictyostelium discoideum cDNA clone:ddv1b07, 3' end, single read. Length = 699
Score = 1360 bits (686), Expect = 0.0 Identities = 695/698 (99%) Strand = Plus / Minus
Query: 413 atcaatggtatcaatgaagtcccattagtcattgccaacgaatccgttgacaccctccca 472 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 699 atcaatggtatcaatgaagtcccattagtcattgccaangaatccgttgacaccntccca 640
Query: 473 aaaaaccaaagctgccgttgaattattaaagaaaatcaacgcctacgctgatgtcaccaa 532 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 639 aaaaaccaaagctgccgttgaattattaaagaaaatcaacgcntacgctgatgtcaccaa 580
Query: 533 agtcatcgactccaaacatattcgtgctggtgctggtaaagcaagaaacagacgttacaa 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 579 agtcatcgactccaaacatattcgtgctggtgctggtaaagcaagaaacagacgttacaa 520
Query: 593 agtccgtaaaggtccattagtcgtcgtctctggtaagactaccgtctcccaagccttacg 652 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 agtccgtaaaggtccattagtcgtcgtctctggtaagactaccgtctcccaagccttacg 460
Query: 653 taacatcccaggtgttgaagttgccaacgtctcaagactcaacttattaaaattagcacc 712 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 taacatcccaggtgttgaagttgccaacgtctcaagactcaacttattaaaattagcacc 400
Query: 713 aggtggtcacttaggtagattcatcatctggactaaatccgctttcgaacaattagactc 772 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 aggtggtcacttaggtagattcatcatctggactaaatccgctttcgaacaattagactc 340
Query: 773 aacctttggtacctttgccaaatcatctgctcaaaagaaaggttacactctcccacgtcc 832 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aacctttggtacctttgccaaatcatctgctcaaaagaaaggttacactctcccacgtcc 280
Query: 833 aatgattgctaacgctgatattgtcagactcgtcaactctgatgaaatccaagctgccgt 892 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 aatgattgctaacgctgatattgtcagactcgtcaactctgatgaaatccaagctgccgt 220
Query: 893 tagagccagcaaagtcgtcgtcaaacgtccaactgccccagttcgtcgttctaacccatt 952 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 tagagccagcaaagtcgtcgtcaaacgtccaactgccccagttcgtcgttctaacccatt 160
Query: 953 aaagaacttacgtgctatnattaaattaaacccagccgccgtctcaacccgtcgtactca 1012 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 aaagaacttacgtgctatnattaaattaaacccagccgccgtctcaacccgtcgtactca 100
Query: 1013 agttaaatcattaaaatcaaaaggtatcaaagttagcaaaaagaatcaattaagagctaa 1072 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99 agttaaatcattaaaatcaaaaggtatcaaagttagcaaaaagaatcaattaagagctaa 40
Query: 1073 atagttgctgccactttcaaccaataatttttaataga 1110 |||||||||||||||||||||||||||||||||||||| Sbjct: 39 atagttgctgccactttcaaccaataatttttaataga 2
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 92845959 Number of Hits to DB: 1,025,033,299 Number of extensions: 54208037 Number of successful extensions: 3892535 Number of sequences better than 10.0: 9355 Length of query: 1110 Length of database: 95,242,211,685 Length adjustment: 24 Effective length of query: 1086 Effective length of database: 97,308,875,965 Effective search space: 105677439297990 Effective search space used: 105677439297990 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
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Homology vs Protein |
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