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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U05840-1
Contig ID Contig-U05840-1
Contig update 2001. 8.30
Contig sequence 
>Contig-U05840-1 (Contig-U05840-1Q) /CSM_Contig/Contig-U05840-1Q.Seq.d
CATTTACAGAGATAACAACACCTTTAATTAATTTAAGATTTTTTTTATTG
GATTTAAATTTAAAAAATCATCCATTATATGTAATTAATGGGTTATTAAT
TTTTGTTGGTTTCGTTTTATTTAGAGTTTTTTATACATCAGCAACAATGT
TTGATGTTATTTTCAATCAACCACATTACTCAATTGAAACTGATCCTTTA
ATACCTTTTTTTATAAATTTTGTATATCCTGCAATCACCCTTTTGAATTT
ATATTGGACATTTTACATTTCAAAATCCATTTTCAAATATTTCACTACTT
CAAAAAATGAAAATTCAAGAATAAAAAATAAACAAGATTAAATTAATTAT
AAAAATAAAAATAAAAATAAAAAAACACTAAAAAAGAAAGATAAAAATCA
CTTTAACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gap no gap
Contig length 450
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 7251840
End point 7251390
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U05840
List of clone(s) 

est1=SSM161F,1,451
Translated Amino Acid sequence 
FTEITTPLINLRFFLLDLNLKNHPLYVINGLLIFVGFVLFRVFYTSATMFDVIFNQPHYS
IETDPLIPFFINFVYPAITLLNLYWTFYISKSIFKYFTTSKNENSRIKNKQD*inyknkn
knkktlkkkdknhfnqkkkkkkkkkkkkk
Translated Amino Acid sequence (All Frames) 
Frame A:
hlqr*qhl*li*dffywi*i*kiihym*lmgy*fllvsfyleffihqqqclmlfsinhit
qlklil*ylfl*ilyilqspf*iyighftfqnpfsnisllqkmkiqe*kinkikliikik
ikikkh*krkikitltkkkkkkkkkkkkkk


Frame B:
iyrdnntfn*fkiffigfkfkkssiicn*wvinfcwfrfi*sflyisnnv*cyfqsttll
n*n*sfntffykfciscnhpfefildilhfkihfqifhyfkk*kfknkk*trln*l*k*k
*k*kntkker*ksl*pkkkkkkkkkkkkk


Frame C:
FTEITTPLINLRFFLLDLNLKNHPLYVINGLLIFVGFVLFRVFYTSATMFDVIFNQPHYS
IETDPLIPFFINFVYPAITLLNLYWTFYISKSIFKYFTTSKNENSRIKNKQD*inyknkn
knkktlkkkdknhfnqkkkkkkkkkkkkk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U05840-1 (Contig-U05840-1Q)
/CSM_Contig/Contig-U05840-1Q.Seq.d
         (450 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U05840-1 (Contig-U05840-1Q) /CSM_Contig/Conti...   289  1e-78
Contig-U09447-1 (Contig-U09447-1Q) /CSM_Contig/Conti...    36  0.031
Contig-U02891-1 (Contig-U02891-1Q) /CSM_Contig/Conti...    36  0.031
Contig-U12375-1 (Contig-U12375-1Q) /CSM_Contig/Conti...    34  0.12
Contig-U12120-1 (Contig-U12120-1Q) /CSM_Contig/Conti...    34  0.12
Contig-U11867-1 (Contig-U11867-1Q) /CSM_Contig/Conti...    34  0.12
Contig-U11780-1 (Contig-U11780-1Q) /CSM_Contig/Conti...    34  0.12
Contig-U11203-1 (Contig-U11203-1Q) /CSM_Contig/Conti...    34  0.12
Contig-U04768-1 (Contig-U04768-1Q) /CSM_Contig/Conti...    34  0.12
Contig-U04555-1 (Contig-U04555-1Q) /CSM_Contig/Conti...    34  0.12

>Contig-U05840-1 (Contig-U05840-1Q) /CSM_Contig/Contig-U05840-1Q.Seq.d
          Length = 450

 Score =  289 bits (146), Expect = 1e-78
 Identities = 160/167 (95%)
 Strand = Plus / Plus

                                                                       
Query: 133 atacatcagcaacaatgtttgatgttattttcaatcaaccacattactcaattgaaactg 192
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atacatcagcaacaatgtttgatgttattttcaatcaaccacattactcaattgaaactg 192

                                                                       
Query: 193 atcctttaataccnnnnnnnataaattttgtatatcctgcaatcacccttttgaatttat 252
           |||||||||||||       ||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atcctttaatacctttttttataaattttgtatatcctgcaatcacccttttgaatttat 252

                                                          
Query: 253 attggacattttacatttcaaaatccattttcaaatatttcactact 299
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 attggacattttacatttcaaaatccattttcaaatatttcactact 299


 Score =  149 bits (75), Expect = 3e-36
 Identities = 91/99 (91%)
 Strand = Plus / Plus

                                                                      
Query: 1  catttacagagataacaacacctttaattaatttaagannnnnnnnattggatttaaatt 60
          ||||||||||||||||||||||||||||||||||||||        ||||||||||||||
Sbjct: 1  catttacagagataacaacacctttaattaatttaagattttttttattggatttaaatt 60

                                                 
Query: 61 taaaaaatcatccattatatgtaattaatgggttattaa 99
          |||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaaaaatcatccattatatgtaattaatgggttattaa 99


>Contig-U09447-1 (Contig-U09447-1Q) /CSM_Contig/Contig-U09447-1Q.Seq.d
          Length = 855

 Score = 36.2 bits (18), Expect = 0.031
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 57  aatttaaaaaatcatcca 74
           ||||||||||||||||||
Sbjct: 538 aatttaaaaaatcatcca 555


>Contig-U02891-1 (Contig-U02891-1Q) /CSM_Contig/Contig-U02891-1Q.Seq.d
          Length = 695

 Score = 36.2 bits (18), Expect = 0.031
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 19  cacctttaattaatttaa 36
           ||||||||||||||||||
Sbjct: 336 cacctttaattaatttaa 319


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5878
Number of Sequences: 6905
Number of extensions: 5878
Number of successful extensions: 762
Number of sequences better than 10.0: 226
length of query: 450
length of database: 5,674,871
effective HSP length: 16
effective length of query: 434
effective length of database: 5,564,391
effective search space: 2414945694
effective search space used: 2414945694
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2008.11. 6
Homology vs DNA 
Query= Contig-U05840-1 (Contig-U05840-1Q) /CSM_Contig/Contig-U05840-1Q.Seq.d
         (450 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AC116987) Dictyostelium discoideum chromosome 2 map 3527441...   145   1e-99  4
(C84103) Dictyostelium discoideum slug cDNA, clone SSC782.        145   1e-99  4
(AU074818) Dictyostelium discoideum slug cDNA, clone SSM161.      105   1e-33  2
(AC201014) Strongylocentrotus purpuratus clone R3-12G8, WORK...    52   0.017  1
(AC180970) Strongylocentrotus purpuratus clone R3-3059B02, W...    52   0.017  1
(AC139728) Carollia perspicillata clone 29G20, complete sequ...    48   0.27   1
(AC150467) Carollia perspicillata clone 70N2, WORKING DRAFT ...    48   0.27   1
(ET021750) MUGQ_CH252P329A01Sp6_CP617_015 CHORI-252 Vervet M...    48   0.27   1
(CP000728) Clostridium botulinum F str. Langeland, complete ...    48   0.27   1
(CP000727) Clostridium botulinum A str. Hall, complete genome.     48   0.27   1
(CP000726) Clostridium botulinum A str. ATCC 19397, complete...    48   0.27   1
(AM412317) Clostridium botulinum A str. ATCC 3502 complete g...    48   0.27   1
(BV609141) S217P60008FE4.T0 Noemie Pan troglodytes troglodyt...    34   0.29   3
(DN586003) 94374086 Sea Urchin primary mesenchyme cell cDNA ...    32   0.37   3
(BM329768) PIC1_43_H01.g1_A002 Pathogen-infected compatible ...    36   0.77   2
(AC138288) Mus musculus chromosome 9, clone RP23-464K22, com...    46   1.1    1
(AC120390) Mus musculus chromosome 9, clone RP24-308L17, com...    46   1.1    1
(AX346402) Sequence 1473 from Patent WO0200928.                    46   1.1    1
(AQ152954) HS_2232_A1_G02_MR CIT Approved Human Genomic Sper...    46   1.1    1
(CE439770) tigr-gss-dog-17000335922762 Dog Library Canis lup...    46   1.1    1
(EB197105) PEG001-C-005184-301 Non-Normalized Pedal-Pleural ...    46   1.1    1
(EV389898) EST_sfon_evi_749080 sfonevi mixed_tissue Salvelin...    46   1.1    1
(EV389897) EST_sfon_evi_748696 sfonevi mixed_tissue Salvelin...    46   1.1    1
(CP000487) Campylobacter fetus subsp. fetus 82-40, complete ...    46   1.1    1
(ER413255) 1095390004779 Global-Ocean-Sampling_GS-34-01-01-1...    34   2.8    2
(ER390905) 1095326012659 Global-Ocean-Sampling_GS-34-01-01-1...    34   2.8    2
(AP009075) Lotus japonicus genomic DNA, chromosome 3, clone:...    34   4.1    4
(AC218217) Bos taurus clone CH240-290I21, WORKING DRAFT SEQU...    40   4.2    2
(BH030811) RPCI-24-239H24.TV RPCI-24 Mus musculus genomic cl...    34   4.2    2
(AC188154) Canis Familiaris chromosome 25, clone XX-122B22, ...    44   4.2    1
(AC182002) Myotis lucifugus clone CH235-508O12, complete seq...    44   4.2    1
(AC149571) Rhinolophus ferrumequinum clone VMRC7-305L23, com...    44   4.2    1
(AL591222) Homo sapiens chromosome 9 BAC RP11-378I6.               44   4.2    1
(AC103549) Homo sapiens 3 BAC RP11-795G18 (Roswell Park Canc...    44   4.2    1
(AC007953) Homo sapiens 3 BAC RP11-2L8 (Roswell Park Cancer ...    44   4.2    1
(CU076044) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   4.2    1
(AC224727) Bos taurus clone CH240-478B24, WORKING DRAFT SEQU...    44   4.2    1
(AQ405039) HS_5048_B2_B02_SP6E RPCI-11 Human Male BAC Librar...    44   4.2    1
(AQ388922) RPCI11-134B8.TJ RPCI-11 Homo sapiens genomic clon...    44   4.2    1
(ER591133) 1093016198811 Global-Ocean-Sampling_GS-36-01-01-2...    44   4.2    1
(ER385764) 1094424003985 Global-Ocean-Sampling_GS-34-01-01-1...    44   4.2    1
(EK573017) 1095521090505 Global-Ocean-Sampling_GS-32-01-01-1...    44   4.2    1
(EJ749404) 1092963024415 Global-Ocean-Sampling_GS-30-02-01-1...    44   4.2    1
(EJ741891) 1092962023563 Global-Ocean-Sampling_GS-30-02-01-1...    44   4.2    1
(CE660014) tigr-gss-dog-17000368451194 Dog Library Canis lup...    44   4.2    1
(CE541426) tigr-gss-dog-17000366031935 Dog Library Canis lup...    44   4.2    1
(AC219274) Bos taurus clone CH240-334P15, WORKING DRAFT SEQU...    40   4.7    2
(EK557697) 1095518005549 Global-Ocean-Sampling_GS-32-01-01-1...    38   5.5    2
(AM423381) Vitis vinifera contig VV78X077414.5, whole genome...    32   6.5    3
(AC220710) Bos taurus clone CH240-348K20, WORKING DRAFT SEQU...    32   7.5    2
(AC173520) Bos taurus clone CH240-116K21, WORKING DRAFT SEQU...    32   7.5    2
(AC223968) Bos taurus clone CH240-452M18, WORKING DRAFT SEQU...    32   7.6    2
(AC018619) Homo sapiens chromosome 11 clone RP11-164B14 map ...    32   7.7    2
(AC220447) Bos taurus clone CH240-358I14, WORKING DRAFT SEQU...    32   7.7    2
(AP003042) Homo sapiens genomic DNA, chromosome 11q clone:RP...    32   7.9    2
(CT573430) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS...    36   9.1    2
(AY124652) Piromyces equi cellulosomal glycoside hydrolase f...    32   10.0   2

>(AC116987) Dictyostelium discoideum chromosome 2 map
           3527441-3568052 strain AX4, complete sequence.
          Length = 40611

 Score =  145 bits (73), Expect(4) = 1e-99
 Identities = 73/73 (100%)
 Strand = Plus / Plus


Query: 133 atacatcagcaacaatgtttgatgttattttcaatcaaccacattactcaattgaaactg 192
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atacatcagcaacaatgtttgatgttattttcaatcaaccacattactcaattgaaactg 680


Query: 193 atcctttaatacc 205
           |||||||||||||
Sbjct: 681 atcctttaatacc 693

 Score =  107 bits (54), Expect(4) = 1e-99
 Identities = 54/54 (100%)
 Strand = Plus / Plus


Query: 213 ataaattttgtatatcctgcaatcacccttttgaatttatattggacattttac 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ataaattttgtatatcctgcaatcacccttttgaatttatattggacattttac 754

 Score =  105 bits (53), Expect(4) = 1e-99
 Identities = 53/53 (100%)
 Strand = Plus / Plus


Query: 47  attggatttaaatttaaaaaatcatccattatatgtaattaatgggttattaa 99
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 attggatttaaatttaaaaaatcatccattatatgtaattaatgggttattaa 587

 Score = 75.8 bits (38), Expect(4) = 1e-99
 Identities = 38/38 (100%)
 Strand = Plus / Plus


Query: 1   catttacagagataacaacacctttaattaatttaaga 38
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 489 catttacagagataacaacacctttaattaatttaaga 526

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 289,347,246
Number of extensions: 19433028
Number of successful extensions: 1821132
Number of sequences better than 10.0: 58
Length of query: 450
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 427
Effective length of database: 93,106,754,628
Effective search space: 39756584226156
Effective search space used: 39756584226156
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
protein update 2009. 6.20
Homology vs Protein 
Query= Contig-U05840-1 (Contig-U05840-1Q) /CSM_Contig/Contig-U05840-1Q.Seq.d
         (450 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q550T0) RecName: Full=Transmembrane protein 56 homolog A;             74   2e-12
AM473524_1(AM473524|pid:none) Vitis vinifera contig VV78X183501....    55   8e-07
BT039093_1(BT039093|pid:none) Zea mays full-length cDNA clone ZM...    55   1e-06
EU969926_1(EU969926|pid:none) Zea mays clone 337348 unknown mRNA.      54   2e-06
AK317775_1(AK317775|pid:none) Arabidopsis thaliana AT4G10360 mRN...    53   3e-06
AY085170_1(AY085170|pid:none) Arabidopsis thaliana clone 1354 mR...    52   5e-06
AK118804_1(AK118804|pid:none) Arabidopsis thaliana mRNA for (NM_...    46   5e-04
AY058052_1(AY058052|pid:none) Arabidopsis thaliana At1g31300/T19...    44   0.001
AK317263_1(AK317263|pid:none) Arabidopsis thaliana AT1G31300 mRN...    44   0.001
BT036666_1(BT036666|pid:none) Zea mays full-length cDNA clone ZM...    43   0.003
AK103291_1(AK103291|pid:none) Oryza sativa Japonica Group cDNA c...    43   0.003
BT061500_1(BT061500|pid:none) Zea mays full-length cDNA clone ZM...    42   0.005
AC108873_8(AC108873|pid:none) Oryza sativa (japonica cultivar-gr...    42   0.007
(Q5XIY2) RecName: Full=Transmembrane protein 56;  &BC083537_1(BC...    42   0.009
AF477201_1(AF477201|pid:none) Homo sapiens CT120 (CT120) mRNA, c...    38   0.097
CU633899_479(CU633899|pid:none) Podospora anserina genomic DNA c...    38   0.097
AX247880_1(AX247880|pid:none) Sequence 121 from Patent WO0166748.      38   0.097
AK125146_1(AK125146|pid:none) Homo sapiens cDNA FLJ43156 fis, cl...    38   0.097
(Q5ND56) RecName: Full=Protein FAM57A;  &AK160183_1(AK160183|pid...    38   0.13
AK293463_1(AK293463|pid:none) Homo sapiens cDNA FLJ56956 complet...    38   0.13
BC084582_1(BC084582|pid:none) Homo sapiens LAG1 homolog, ceramid...    38   0.13
(P27544) RecName: Full=LAG1 longevity assurance homolog 1; AltNa...    38   0.13
AL591129_5(AL591129|pid:none) Mouse DNA sequence from clone RP23...    38   0.13
AL049488_16(AL049488|pid:none) Arabidopsis thaliana DNA chromoso...    37   0.17
BT082260_1(BT082260|pid:none) Anoplopoma fimbria clone afim-evh-...    37   0.28
AY672684_1(AY672684|pid:none) Sus scrofa CT120 protein (CT120) g...    36   0.37
AM476024_1(AM476024|pid:none) Vitis vinifera contig VV78X159831....    36   0.48
AP008230_4426(AP008230|pid:none) Desulfitobacterium hafniense Y5...    35   0.82
FN392320_1164(FN392320|pid:none) Pichia pastoris GS115 chromosom...    35   0.82
CP000248_2561(CP000248|pid:none) Novosphingobium aromaticivorans...    35   1.1
CP000568_664(CP000568|pid:none) Clostridium thermocellum ATCC 27...    34   1.8
AJ248286_246(AJ248286|pid:none) Pyrococcus abyssi complete genom...    34   1.8
FM992688_324(FM992688|pid:none) Candida dubliniensis CD36 chromo...    33   2.4
CP000498_97(CP000498|pid:none) Pichia stipitis CBS 6054 chromoso...    33   3.1
AF024571_1(AF024571|pid:none) Staphylococcus aureus high affinit...    33   4.1
U06451_1(U06451|pid:none) Staphylococcus aureus proline permease...    32   5.3
AF016223_9(AF016223|pid:none) Rhodobacter capsulatus phosphoribo...    32   5.3
(Q6GFF5) RecName: Full=Sodium/proline symporter; AltName: Full=P...    32   5.3
AP009351_1847(AP009351|pid:none) Staphylococcus aureus subsp. au...    32   5.3
(Q2YU74) RecName: Full=Sodium/proline symporter; AltName: Full=P...    32   5.3
(A8Z2R6) RecName: Full=Sodium/proline symporter; AltName: Full=P...    32   5.3
FN392320_809(FN392320|pid:none) Pichia pastoris GS115 chromosome...    32   6.9
BT079116_1(BT079116|pid:none) Esox lucius clone eluc-evq-533-163...    32   6.9
AL389891_11(AL389891|pid:none) Neurospora crassa DNA linkage gro...    32   6.9
CP001393_48(CP001393|pid:none) Anaerocellum thermophilum DSM 672...    32   9.1
CP001150_2050(CP001150|pid:none) Rhodobacter sphaeroides KD131 c...    32   9.1
CP000577_2329(CP000577|pid:none) Rhodobacter sphaeroides ATCC 17...    32   9.1
CP000356_1659(CP000356|pid:none) Sphingopyxis alaskensis RB2256,...    32   9.1

>(Q550T0) RecName: Full=Transmembrane protein 56 homolog A;
          Length = 258

 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 37/105 (35%), Positives = 58/105 (55%)
 Frame = +3

Query: 9   EITTPLINLRFFLLDLNLKNHPLYVINGLLIFVGFVLFRVFYTSATMFDVIFNQPHYSIE 188
           EIT P I++++FL DL L+NH LY ING ++   F+  R  Y    +  +  N      E
Sbjct: 153 EITNPFIHMKWFLKDLKLENHILYSINGFMMAFFFIFIRDIYVPIKVVKIYING---YTE 209

Query: 189 TDPLIPFFINFVYPAITLLNLYWTFYISKSIFKYFTTSKNENSRI 323
            + +    I F +P IT+LNL+WT+ + K I K+ + +K    +I
Sbjct: 210 LNSIANTIIFFCFPIITILNLFWTYLVIKGILKHLSRTKTSTPQI 254

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 407,626,989
Number of extensions: 6142978
Number of successful extensions: 16897
Number of sequences better than 10.0: 48
Number of HSP's gapped: 16884
Number of HSP's successfully gapped: 48
Length of query: 150
Length of database: 1,040,966,779
Length adjustment: 112
Effective length of query: 38
Effective length of database: 682,086,859
Effective search space: 25919300642
Effective search space used: 25919300642
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)
PSORT 

 psg: 0.75  gvh: 0.50  alm: 0.24  top: 0.43  tms: 0.07  mit: 0.27  mip: 0.08
 nuc: 0.00  erl: 0.00  erm: 0.40  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.19  leu: 0.19  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 24.0 %: mitochondrial
	 24.0 %: nuclear
	 20.0 %: cytoplasmic
	 16.0 %: endoplasmic reticulum
	  8.0 %: Golgi
	  4.0 %: plasma membrane
	  4.0 %: peroxisomal

>> prediction for Contig-U05840-1 is mit
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0