>Contig-U05833-1 (Contig-U05833-1Q) /CSM_Contig/Contig-U05833-1Q.Seq.d
GTAAAGAGAGCCGCAATCACCAATGACTTTATTGGTTCAGAACTCCGTGT
CCGTGATGATGAACAACCATTGATTCATTTTGCCGTTGCTGTTAGAGCCC
TTCCATGGACTGATCCAGATTACTTTGTTTTAGAATTAATTCAAACTATG
ATTGGTAACTGGAATCGTGGTATTGCCGCCGGTAAAAACATTGCATCAAA
CCTTGGTGAAATTGTTGCCACTGAAGATCTTGCAGAATCTTATTCTACCT
TTTTCACTTGTTATCAAGATACAGGTCTTTTCGGTAACTATGGTGTTTGT
CAACCAGAACGTGTTGATGATTTAGTTGCTGAAATGTTGAAGGAATGGCA
AGGAATCGCAACTAGTTGCAATAAAAATGAGGTAGAACGTAACAAACAAA
AACTTTTAGCTACCACATTAATGCAATACGATGGTACCAGTAAAGTTTGC
GAAGGCATTGGTCGTCAAATTTTAACTTTAGGTCGTCGTTTATCACCATT
TGAGGTATACACACGTATTAATGAAATCACAGTTGCTGATGTTCAACGTG
TTGCATCTACCCTTCTTCGTGATGTTTCACCAGCAGTTACTGCCATTGGC
CCAATTGCAAACTACCCTGACTACAATTTTGTTAAAGGCTGGACTTATTG
GAACAGATTATAGGTTTATAAAAATAAATAATAATATTAATAATATTAAA
TAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATA
ATAATAATAATAATAATAATAATAATAATAATAATAAAGTGGTTAATACA
TAAATACATTCAGGCAATTAATCCACACTAAACTCATACATTCTCAAAAA
AAAACTGTTAAAAAATAATATATATAAAAATAATAATAAAATAAAATGAA
AAAAAAAACATACTAAAAAAAAAAAA

est1=SSM107E,1,927
est2=VSJ117F,397,863

VKRAAITNDFIGSELRVRDDEQPLIHFAVAVRALPWTDPDYFVLELIQTMIGNWNRGIAA
GKNIASNLGEIVATEDLAESYSTFFTCYQDTGLFGNYGVCQPERVDDLVAEMLKEWQGIA
TSCNKNEVERNKQKLLATTLMQYDGTSKVCEGIGRQILTLGRRLSPFEVYTRINEITVAD
VQRVASTLLRDVSPAVTAIGPIANYPDYNFVKGWTYWNRL*vyknk**y**y*iiiiiii
iiiiiiiiiiiiiiiiiiiiiikwlihkyiqainph*thtfskknc*kiiyikiiik*ne
kknilkkk

Frame A:
VKRAAITNDFIGSELRVRDDEQPLIHFAVAVRALPWTDPDYFVLELIQTMIGNWNRGIAA
GKNIASNLGEIVATEDLAESYSTFFTCYQDTGLFGNYGVCQPERVDDLVAEMLKEWQGIA
TSCNKNEVERNKQKLLATTLMQYDGTSKVCEGIGRQILTLGRRLSPFEVYTRINEITVAD
VQRVASTLLRDVSPAVTAIGPIANYPDYNFVKGWTYWNRL*vyknk**y**y*iiiiiii
iiiiiiiiiiiiiiiiiiiiiikwlihkyiqainph*thtfskknc*kiiyikiiik*ne
kknilkkk


Frame B:
*repqspmtllvqnsvsvmmnnh*filplllepfhgliqitlf*n*fkl*lvtgivvlpp
vktlhqtlvkllplkilqnlilpfslvikiqvfsvtmvfvnqnvlmi*llkc*rngkesq
lvaikmr*nvtnknf*lph*cntmvpvkfakalvvkf*l*vvvyhhlrythvlmksqllm
fnvlhlpffvmfhqqllplaqlqttlttillkagligtdyrfikinnninnik*******
**********************sg*yintfrqlihtklihsqkktvkk*yi*k***nkmk
kkty*kkk


Frame C:
kesrnhq*lywfrtpcp***ttidsfcrcc*spsmd*srllcfrinsnydw*leswycrr
*khcikpw*ncch*rscrilfylfhllsryrsfr*lwclstrtc**fsc*nvegmarnrn
*lq*k*grt*qtktfsyhinairwyq*slrrhwssnfnfrssfiti*gihty**nhsc*c
stcciypss*cftssychwpncklp*lqfc*rldlleqiigl*k*iiiliilnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnkvvnt*ihsgn*stlnsyilkkkllknniyknnnkik*k
kkhtkkkk

Query= Contig-U05833-1 (Contig-U05833-1Q)
/CSM_Contig/Contig-U05833-1Q.Seq.d
         (926 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U05833-1 (Contig-U05833-1Q) /CSM_Contig/Conti...  1318  0.0
Contig-U09791-1 (Contig-U09791-1Q) /CSM_Contig/Conti...    36  0.065
Contig-U13611-1 (Contig-U13611-1Q) /CSM_Contig/Conti...    34  0.26
Contig-U12370-1 (Contig-U12370-1Q) /CSM_Contig/Conti...    34  0.26
Contig-U11797-1 (Contig-U11797-1Q) /CSM_Contig/Conti...    34  0.26
Contig-U10933-1 (Contig-U10933-1Q) /CSM_Contig/Conti...    34  0.26
Contig-U13518-1 (Contig-U13518-1Q) /CSM_Contig/Conti...    32  1.0
Contig-U12507-1 (Contig-U12507-1Q) /CSM_Contig/Conti...    32  1.0
Contig-U11964-1 (Contig-U11964-1Q) /CSM_Contig/Conti...    32  1.0

>Contig-U05833-1 (Contig-U05833-1Q) /CSM_Contig/Contig-U05833-1Q.Seq.d
          Length = 926

 Score = 1318 bits (665), Expect = 0.0
 Identities = 665/665 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtaaagagagccgcaatcaccaatgactttattggttcagaactccgtgtccgtgatgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtaaagagagccgcaatcaccaatgactttattggttcagaactccgtgtccgtgatgat 60

                                                                       
Query: 61  gaacaaccattgattcattttgccgttgctgttagagcccttccatggactgatccagat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gaacaaccattgattcattttgccgttgctgttagagcccttccatggactgatccagat 120

                                                                       
Query: 121 tactttgttttagaattaattcaaactatgattggtaactggaatcgtggtattgccgcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tactttgttttagaattaattcaaactatgattggtaactggaatcgtggtattgccgcc 180

                                                                       
Query: 181 ggtaaaaacattgcatcaaaccttggtgaaattgttgccactgaagatcttgcagaatct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtaaaaacattgcatcaaaccttggtgaaattgttgccactgaagatcttgcagaatct 240

                                                                       
Query: 241 tattctacctttttcacttgttatcaagatacaggtcttttcggtaactatggtgtttgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tattctacctttttcacttgttatcaagatacaggtcttttcggtaactatggtgtttgt 300

                                                                       
Query: 301 caaccagaacgtgttgatgatttagttgctgaaatgttgaaggaatggcaaggaatcgca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaccagaacgtgttgatgatttagttgctgaaatgttgaaggaatggcaaggaatcgca 360

                                                                       
Query: 361 actagttgcaataaaaatgaggtagaacgtaacaaacaaaaacttttagctaccacatta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actagttgcaataaaaatgaggtagaacgtaacaaacaaaaacttttagctaccacatta 420

                                                                       
Query: 421 atgcaatacgatggtaccagtaaagtttgcgaaggcattggtcgtcaaattttaacttta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgcaatacgatggtaccagtaaagtttgcgaaggcattggtcgtcaaattttaacttta 480

                                                                       
Query: 481 ggtcgtcgtttatcaccatttgaggtatacacacgtattaatgaaatcacagttgctgat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggtcgtcgtttatcaccatttgaggtatacacacgtattaatgaaatcacagttgctgat 540

                                                                       
Query: 541 gttcaacgtgttgcatctacccttcttcgtgatgtttcaccagcagttactgccattggc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gttcaacgtgttgcatctacccttcttcgtgatgtttcaccagcagttactgccattggc 600

                                                                       
Query: 601 ccaattgcaaactaccctgactacaattttgttaaaggctggacttattggaacagatta 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccaattgcaaactaccctgactacaattttgttaaaggctggacttattggaacagatta 660

                
Query: 661 taggt 665
           |||||
Sbjct: 661 taggt 665


 Score =  115 bits (58), Expect = 9e-26
 Identities = 58/58 (100%)
 Strand = Plus / Plus

                                                                     
Query: 788 agtggttaatacataaatacattcaggcaattaatccacactaaactcatacattctc 845
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 agtggttaatacataaatacattcaggcaattaatccacactaaactcatacattctc 845


>Contig-U09791-1 (Contig-U09791-1Q) /CSM_Contig/Contig-U09791-1Q.Seq.d
          Length = 1298

 Score = 36.2 bits (18), Expect = 0.065
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 111  tgatccagattactttgtttta 132
            ||||||||||| ||||||||||
Sbjct: 991  tgatccagatttctttgtttta 1012


>Contig-U13611-1 (Contig-U13611-1Q) /CSM_Contig/Contig-U13611-1Q.Seq.d
          Length = 639

 Score = 34.2 bits (17), Expect = 0.26
 Identities = 17/17 (100%)
 Strand = Plus / Minus

                            
Query: 53  gtgatgatgaacaacca 69
           |||||||||||||||||
Sbjct: 356 gtgatgatgaacaacca 340


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5176
Number of Sequences: 6905
Number of extensions: 5176
Number of successful extensions: 430
Number of sequences better than 10.0: 36
length of query: 926
length of database: 5,674,871
effective HSP length: 16
effective length of query: 910
effective length of database: 5,564,391
effective search space: 5063595810
effective search space used: 5063595810
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)

Query= Contig-U05833-1 (Contig-U05833-1Q) /CSM_Contig/Contig-U05833-1Q.Seq.d
         (926 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AB213514) Dictyostelium discoideum mppb mRNA for beta subun...  1314   0.0    1
(AU038890) Dictyostelium discoideum slug cDNA, clone SSM107.      777   0.0    2
(AU269428) Dictyostelium discoideum vegetative cDNA clone:VS...   537   e-163  2
(AU074800) Dictyostelium discoideum slug cDNA, clone SSM107.      476   e-130  1
(ER361483) 1092404035518 Global-Ocean-Sampling_GS-34-01-01-1...    46   2.3    1
(EC762576) PSE00006295 rw_mgpallid Polysphondylium pallidum ...    46   2.3    1
(EC760850) PSE00005645 rw_mgpallid Polysphondylium pallidum ...    46   2.3    1
(ET304093) S0285G05_T7 CHORI-214 Salmo salar genomic clone S...    42   7.8    2
(AC110174) Mus musculus chromosome 3, clone RP23-293K21, com...    44   9.3    1
(ER025159) 1095521441709 Global-Ocean-Sampling_GS-33-01-01-1...    44   9.3    1
(ES738268) MytUSCGMHMa4pTrueBlue00f14f1 Mytilus californianu...    44   9.3    1

>(AB213514) Dictyostelium discoideum mppb mRNA for beta subunit of
            mitochondrial processing peptidase, complete cds.
          Length = 1689

 Score = 1314 bits (663), Expect = 0.0
 Identities = 666/667 (99%)
 Strand = Plus / Plus


Query: 1    gtaaagagagccgcaatcaccaatgactttattggttcagaactccgtgtccgtgatgat 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755  gtaaagagagccgcaatcaccaatgactttattggttcagaactccgtgtccgtgatgat 814


Query: 61   gaacaaccattgattcattttgccgttgctgttagagcccttccatggactgatccagat 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815  gaacaaccattgattcattttgccgttgctgttagagcccttccatggactgatccagat 874


Query: 121  tactttgttttagaattaattcaaactatgattggtaactggaatcgtggtattgccgcc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875  tactttgttttagaattaattcaaactatgattggtaactggaatcgtggtattgccgcc 934


Query: 181  ggtaaaaacattgcatcaaaccttggtgaaattgttgccactgaagatcttgcagaatct 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935  ggtaaaaacattgcatcaaaccttggtgaaattgttgccactgaagatcttgcagaatct 994


Query: 241  tattctacctttttcacttgttatcaagatacaggtcttttcggtaactatggtgtttgt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 995  tattctacctttttcacttgttatcaagatacaggtcttttcggtaactatggtgtttgt 1054


Query: 301  caaccagaacgtgttgatgatttagttgctgaaatgttgaaggaatggcaaggaatcgca 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1055 caaccagaacgtgttgatgatttagttgctgaaatgttgaaggaatggcaaagaatcgca 1114


Query: 361  actagttgcaataaaaatgaggtagaacgtaacaaacaaaaacttttagctaccacatta 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1115 actagttgcaataaaaatgaggtagaacgtaacaaacaaaaacttttagctaccacatta 1174


Query: 421  atgcaatacgatggtaccagtaaagtttgcgaaggcattggtcgtcaaattttaacttta 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1175 atgcaatacgatggtaccagtaaagtttgcgaaggcattggtcgtcaaattttaacttta 1234


Query: 481  ggtcgtcgtttatcaccatttgaggtatacacacgtattaatgaaatcacagttgctgat 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1235 ggtcgtcgtttatcaccatttgaggtatacacacgtattaatgaaatcacagttgctgat 1294


Query: 541  gttcaacgtgttgcatctacccttcttcgtgatgtttcaccagcagttactgccattggc 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1295 gttcaacgtgttgcatctacccttcttcgtgatgtttcaccagcagttactgccattggc 1354


Query: 601  ccaattgcaaactaccctgactacaattttgttaaaggctggacttattggaacagatta 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1355 ccaattgcaaactaccctgactacaattttgttaaaggctggacttattggaacagatta 1414


Query: 661  taggttt 667
            |||||||
Sbjct: 1415 taggttt 1421

 Score = 77.8 bits (39), Expect = 7e-10
 Identities = 39/39 (100%)
 Strand = Plus / Plus


Query: 807  cattcaggcaattaatccacactaaactcatacattctc 845
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 cattcaggcaattaatccacactaaactcatacattctc 1599

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 699,011,785
Number of extensions: 37456342
Number of successful extensions: 2758876
Number of sequences better than 10.0: 11
Length of query: 926
Length of database: 95,242,211,685
Length adjustment: 24
Effective length of query: 902
Effective length of database: 97,308,875,965
Effective search space: 87772606120430
Effective search space used: 87772606120430
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

Query= Contig-U05833-1 (Contig-U05833-1Q) /CSM_Contig/Contig-U05833-1Q.Seq.d
         (926 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297_1984(AE014297|pid:none) Drosophila melanogaster chromos...   189   1e-46
BC072067_1(BC072067|pid:none) Xenopus laevis hypothetical protei...   188   3e-46
BC121600_1(BC121600|pid:none) Xenopus tropicalis peptidase (mito...   188   3e-46
BC123109_1(BC123109|pid:none) Xenopus laevis hypothetical protei...   187   6e-46
BC088718_1(BC088718|pid:none) Xenopus laevis hypothetical LOC496...   186   7e-46
AF297643_1(AF297643|pid:none) Cucumis melo mitochondrial process...   183   6e-45
(Q3SZ71) RecName: Full=Mitochondrial-processing peptidase subuni...   177   3e-43
CR847994_6(CR847994|pid:none) Zebrafish DNA sequence from clone ...   176   8e-43
AM430801_1(AM430801|pid:none) Vitis vinifera contig VV78X158374....   176   8e-43
AF363285_1(AF363285|pid:none) Avicennia marina mitochondrial pro...   176   1e-42
(Q9CXT8) RecName: Full=Mitochondrial-processing peptidase subuni...   174   3e-42
AK169417_1(AK169417|pid:none) Mus musculus 17 days embryo kidney...   174   3e-42
BC087943_1(BC087943|pid:none) Mus musculus peptidase (mitochondr...   174   3e-42
(Q03346) RecName: Full=Mitochondrial-processing peptidase subuni...   174   4e-42
(Q9P7X1) RecName: Full=Probable mitochondrial-processing peptida...   174   4e-42
AB170492_1(AB170492|pid:none) Macaca fascicularis brain cDNA clo...   173   6e-42
L12965_1(L12965|pid:none) Rat mitochondrial processing peptidase...   173   6e-42
(O75439) RecName: Full=Mitochondrial-processing peptidase subuni...   172   2e-41
AL050216_1(AL050216|pid:none) Homo sapiens mRNA; cDNA DKFZp586I1...   172   2e-41
AX400007_1(AX400007|pid:none) Sequence 178 from Patent WO0218424.     171   3e-41
DQ284488_1(DQ284488|pid:none) Solanum tuberosum clone 028E08 mit...   171   3e-41
D89152_1(D89152|pid:none) Schizosaccharomyces pombe mRNA, partia...   169   9e-41
AK000994_1(AK000994|pid:none) Homo sapiens cDNA FLJ10132 fis, cl...   169   9e-41
CR382127_445(CR382127|pid:none) Yarrowia lipolytica strain CLIB1...   167   6e-40
AP008209_715(AP008209|pid:none) Oryza sativa (japonica cultivar-...   167   6e-40
EU963985_1(EU963985|pid:none) Zea mays clone 274813 mitochondria...   166   8e-40
X80235_1(X80235|pid:none) S.tuberosum mRNA for beta-II MPP.           166   1e-39
B48529(B48529)ubiquinol-cytochrome-c reductase (EC 1.10.2.2) bet...   166   1e-39
AK289864_1(AK289864|pid:none) Homo sapiens cDNA FLJ78497 complet...   165   2e-39
(Q9Y8B5) RecName: Full=Mitochondrial-processing peptidase subuni...   164   3e-39
BT033620_1(BT033620|pid:none) Zea mays full-length cDNA clone ZM...   164   5e-39
AB169609_1(AB169609|pid:none) Macaca fascicularis brain cDNA, cl...   163   9e-39
AM269982_47(AM269982|pid:none) Aspergillus niger contig An01c035...   162   1e-38
BX649607_57(BX649607|pid:none) Aspergillus fumigatus BAC pilot p...   161   3e-38
A48529(A48529)ubiquinol-cytochrome-c reductase (EC 1.10.2.2) 55K...   161   3e-38
AE017347_88(AE017347|pid:none) Cryptococcus neoformans var. neof...   160   4e-38
CU633438_706(CU633438|pid:none) Podospora anserina genomic DNA c...   159   1e-37
CR760120_1(CR760120|pid:none) Xenopus tropicalis finished cDNA, ...   158   3e-37
AK297354_1(AK297354|pid:none) Homo sapiens cDNA FLJ58513 complet...   157   4e-37
BC104500_1(BC104500|pid:none) Bos taurus UQCRC1 protein, mRNA (c...   155   2e-36
(P31800) RecName: Full=Cytochrome b-c1 complex subunit 1, mitoch...   155   2e-36
A48043(A48043;I52367) ubiquinol-cytochrome-c reductase (EC 1.10....   154   4e-36
(P31930) RecName: Full=Cytochrome b-c1 complex subunit 1, mitoch...   154   4e-36
AK168218_1(AK168218|pid:none) Mus musculus CRL-1722 L5178Y-R cDN...   154   5e-36
(Q9CZ13) RecName: Full=Cytochrome b-c1 complex subunit 1, mitoch...   154   5e-36
BT072204_1(BT072204|pid:none) Salmo salar clone ssal-rgf-516-313...   153   9e-36
FN314331_1(FN314331|pid:none) Schistosoma japonicum isolate Anhu...   153   9e-36
(Q68FY0) RecName: Full=Cytochrome b-c1 complex subunit 1, mitoch...   151   3e-35
BC059705_1(BC059705|pid:none) Danio rerio ubiquinol-cytochrome c...   150   8e-35
FN357306_44(FN357306|pid:none) Schistosoma mansoni genome sequen...   147   4e-34
AP002901_18(AP002901|pid:none) Oryza sativa Japonica Group genom...   144   3e-33
AP008207_2312(AP008207|pid:none) Oryza sativa (japonica cultivar...   144   3e-33
BT039573_1(BT039573|pid:none) Zea mays full-length cDNA clone ZM...   144   5e-33
CP000600_241(CP000600|pid:none) Ostreococcus lucimarinus CCE9901...   140   8e-32
AB163419_1(AB163419|pid:none) Brugia malayi mRNA for mitochondri...   137   7e-31
CR954214_268(CR954214|pid:none) Ostreococcus tauri strain OTTH05...   137   7e-31
AF271294_1(AF271294|pid:none) Oryza sativa C3meo4 mRNA, complete...   137   7e-31
CU928170_377(CU928170|pid:none) Kluyveromyces thermotolerans str...   135   1e-30
CU928175_154(CU928175|pid:none) Zygosaccharomyces rouxii strain ...   134   3e-30
CR940347_1013(CR940347|pid:none) Theileria annulata strain Ankar...   132   1e-29
(P10507) RecName: Full=Mitochondrial-processing peptidase subuni...   131   3e-29
AE016820_233(AE016820|pid:none) Ashbya gossypii (= Eremothecium ...   131   4e-29
FM992688_306(FM992688|pid:none) Candida dubliniensis CD36 chromo...   129   1e-28
BC018405_1(BC018405|pid:none) Mus musculus ubiquinol-cytochrome ...   129   2e-28
CR382139_696(CR382139|pid:none) Debaryomyces hansenii strain CBS...   128   2e-28
FN392321_873(FN392321|pid:none) Pichia pastoris GS115 chromosome...   128   3e-28
AL844508_334(AL844508|pid:none) Plasmodium falciparum 3D7 chromo...   124   4e-27
Z68270_3(Z68270|pid:none) Caenorhabditis elegans Cosmid ZC410, c...   120   6e-26
AM910989_315(AM910989|pid:none) Plasmodium knowlesi strain H chr...   112   1e-23
CR382136_588(CR382136|pid:none) Debaryomyces hansenii strain CBS...   108   2e-22
AF190821_1(AF190821|pid:none) Toxoplasma gondii mitochondrial pr...   108   3e-22
CP000496_1011(CP000496|pid:none) Pichia stipitis CBS 6054 chromo...   104   5e-21
(P07256) RecName: Full=Cytochrome b-c1 complex subunit 1, mitoch...    97   1e-18
CR382125_246(CR382125|pid:none) Kluyveromyces lactis strain NRRL...    96   2e-18
CU928169_71(CU928169|pid:none) Kluyveromyces thermotolerans stra...    92   3e-17
CU928179_744(CU928179|pid:none) Zygosaccharomyces rouxii strain ...    89   3e-16
AK221074_1(AK221074|pid:none) Arabidopsis thaliana mRNA for puta...    87   1e-15
CR380952_181(CR380952|pid:none) Candida glabrata strain CBS138 c...    86   1e-15
CU459003_2310(CU459003|pid:none) Magnetospirillum gryphiswaldens...    86   2e-15
BC097637_1(BC097637|pid:none) Xenopus laevis hypothetical protei...    84   5e-15
AM920428_1082(AM920428|pid:none) Penicillium chrysogenum Wiscons...    84   9e-15
CP001576_112(CP001576|pid:none) Micromonas sp. RCC299 chromosome...    83   1e-14
CP000230_3224(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117...    82   3e-14
CP000009_1806(CP000009|pid:none) Gluconobacter oxydans 621H, com...    82   3e-14
(P97997) RecName: Full=Mitochondrial-processing peptidase subuni...    80   1e-13
AM270166_28(AM270166|pid:none) Aspergillus niger contig An08c011...    80   1e-13
BC079004_1(BC079004|pid:none) Rattus norvegicus peptidase (mitoc...    79   2e-13
(Q5R513) RecName: Full=Mitochondrial-processing peptidase subuni...    79   2e-13
CR861072_1(CR861072|pid:none) Pongo abelii mRNA; cDNA DKFZp459H0...    79   2e-13
CP001280_1236(CP001280|pid:none) Methylocella silvestris BL2, co...    79   2e-13
AK158990_1(AK158990|pid:none) Mus musculus visual cortex cDNA, R...    79   2e-13
AP007154_335(AP007154|pid:none) Aspergillus oryzae RIB40 genomic...    79   2e-13
D50913_1(D50913|pid:none) Homo sapiens KIAA0123 mRNA, partial cds.     79   3e-13
CP000236_221(CP000236|pid:none) Ehrlichia chaffeensis str. Arkan...    79   3e-13
AK296617_1(AK296617|pid:none) Homo sapiens cDNA FLJ54999 complet...    79   3e-13
(Q10713) RecName: Full=Mitochondrial-processing peptidase subuni...    79   3e-13
CP001196_684(CP001196|pid:none) Oligotropha carboxidovorans OM5 ...    78   4e-13
D21064_1(D21064|pid:none) Homo sapiens KIAA0123 mRNA, partial cds.     78   5e-13
BC085400_1(BC085400|pid:none) Danio rerio peptidase (mitochondri...    77   6e-13
(P43264) RecName: Full=Ubiquinol-cytochrome-c reductase complex ...    77   8e-13
CU633900_500(CU633900|pid:none) Podospora anserina genomic DNA c...    77   8e-13
AL844504_228(AL844504|pid:none) Plasmodium falciparum 3D7 chromo...    76   2e-12
AL929353_73(AL929353|pid:none) Plasmodium falciparum strain 3D7,...    76   2e-12
(P20069) RecName: Full=Mitochondrial-processing peptidase subuni...    76   2e-12
(Q0P5M8) RecName: Full=Mitochondrial-processing peptidase subuni...    75   2e-12
CP000612_1914(CP000612|pid:none) Desulfotomaculum reducens MI-1,...    75   4e-12
CR382125_505(CR382125|pid:none) Kluyveromyces lactis strain NRRL...    74   9e-12
AM910992_92(AM910992|pid:none) Plasmodium knowlesi strain H chro...    72   3e-11
CP000599_16(CP000599|pid:none) Ostreococcus lucimarinus CCE9901 ...    72   3e-11
CP000463_4718(CP000463|pid:none) Rhodopseudomonas palustris BisA...    72   3e-11
CR382132_559(CR382132|pid:none) Yarrowia lipolytica strain CLIB1...    72   3e-11
CP000115_230(CP000115|pid:none) Nitrobacter winogradskyi Nb-255,...    72   3e-11
AP009389_1278(AP009389|pid:none) Pelotomaculum thermopropionicum...    71   5e-11
AM502253_145(AM502253|pid:none) Leishmania infantum chromosome 35.     71   6e-11
CP000081_135(CP000081|pid:none) Leishmania major chromosome 35, ...    71   6e-11
CU234118_6323(CU234118|pid:none) Bradyrhizobium sp. ORS278,compl...    70   8e-11
AM494971_130(AM494971|pid:none) Leishmania braziliensis chromoso...    70   1e-10
CP000232_1032(CP000232|pid:none) Moorella thermoacetica ATCC 390...    69   2e-10
CP001016_712(CP001016|pid:none) Beijerinckia indica subsp. indic...    69   2e-10
BT061204_1(BT061204|pid:none) Zea mays full-length cDNA clone ZM...    69   3e-10
AP009493_1782(AP009493|pid:none) Streptomyces griseus subsp. gri...    68   5e-10
X14105_1(X14105|pid:none) Yeast MAS2 gene for mitochondrial proc...    67   1e-09
AM420293_5741(AM420293|pid:none) Saccharopolyspora erythraea NRR...    66   1e-09
CP001336_3614(CP001336|pid:none) Desulfitobacterium hafniense DC...    66   1e-09
BT053555_1(BT053555|pid:none) Medicago truncatula clone MTYFT1G-...    66   2e-09
CP001191_628(CP001191|pid:none) Rhizobium leguminosarum bv. trif...    66   2e-09
(O04308) RecName: Full=Probable mitochondrial-processing peptida...    65   2e-09
AM502251_242(AM502251|pid:none) Leishmania infantum chromosome 33.     65   2e-09
CR380956_23(CR380956|pid:none) Candida glabrata strain CBS138 ch...    65   2e-09
AY035171_1(AY035171|pid:none) Arabidopsis thaliana putative mito...    65   3e-09
CP000249_3511(CP000249|pid:none) Frankia sp. CcI3, complete geno...    65   3e-09
BA000030_2528(BA000030|pid:none) Streptomyces avermitilis MA-468...    65   4e-09
AM236080_1071(AM236080|pid:none) Rhizobium leguminosarum bv. vic...    65   4e-09
CP001389_534(CP001389|pid:none) Rhizobium sp. NGR234, complete g...    64   6e-09
CP000490_1462(CP000490|pid:none) Paracoccus denitrificans PD1222...    64   7e-09
AK226475_1(AK226475|pid:none) Arabidopsis thaliana mRNA for hypo...    64   7e-09
AM260525_591(AM260525|pid:none) Bartonella tribocorum CIP 105476...    64   7e-09
BC152592_1(BC152592|pid:none) Danio rerio ubiquinol-cytochrome c...    64   7e-09
BC071551_1(BC071551|pid:none) Danio rerio ubiquinol-cytochrome c...    64   7e-09
CP001001_1557(CP001001|pid:none) Methylobacterium radiotolerans ...    64   9e-09
CU928175_457(CU928175|pid:none) Zygosaccharomyces rouxii strain ...    63   2e-08
CP000860_880(CP000860|pid:none) Candidatus Desulforudis audaxvia...    63   2e-08
BT058379_1(BT058379|pid:none) Salmo salar clone Contig14 Cytochr...    62   2e-08
BT043725_1(BT043725|pid:none) Salmo salar clone HM5_3081 ubiquin...    62   2e-08
BC042931_1(BC042931|pid:none) Xenopus laevis Ubiquinol-cytochrom...    62   3e-08
AC007864_28(AC007864|pid:none) Trypanosoma brucei chromosome 2 c...    62   3e-08
CP000141_1121(CP000141|pid:none) Carboxydothermus hydrogenoforma...    62   4e-08
CP000738_531(CP000738|pid:none) Sinorhizobium medicae WSM419, co...    62   4e-08
AK071930_1(AK071930|pid:none) Oryza sativa Japonica Group cDNA c...    62   4e-08
BC076480_1(BC076480|pid:none) Danio rerio zgc:92453, mRNA (cDNA ...    62   4e-08
BT040235_1(BT040235|pid:none) Zea mays full-length cDNA clone ZM...    61   5e-08
AL591785_132(AL591785|pid:none) Sinorhizobium meliloti 1021 comp...    61   5e-08
EU952171_1(EU952171|pid:none) Zea mays clone 1215850 mitochondri...    61   5e-08
CP000758_597(CP000758|pid:none) Ochrobactrum anthropi ATCC 49188...    60   8e-08
(P29677) RecName: Full=Mitochondrial-processing peptidase subuni...    60   8e-08
BT053574_1(BT053574|pid:none) Medicago truncatula clone MTYFT1G-...    60   8e-08
BX897700_359(BX897700|pid:none) Bartonella quintana str. Toulous...    60   8e-08
AY011123_1(AY011123|pid:none) Dactylis glomerata mitochondrial p...    60   1e-07
CP000686_385(CP000686|pid:none) Roseiflexus sp. RS-1, complete g...    60   1e-07
AE017321_220(AE017321|pid:none) Wolbachia endosymbiont strain TR...    60   1e-07
CR760280_1(CR760280|pid:none) Xenopus tropicalis finished cDNA, ...    60   1e-07
CP000633_799(CP000633|pid:none) Agrobacterium vitis S4 chromosom...    60   1e-07
AK318995_1(AK318995|pid:none) Arabidopsis thaliana AT3G16480 mRN...    59   2e-07
AK317606_1(AK317606|pid:none) Arabidopsis thaliana AT3G16480 mRN...    59   2e-07
CP000628_950(CP000628|pid:none) Agrobacterium radiobacter K84 ch...    59   2e-07
AB170768_1(AB170768|pid:none) Macaca fascicularis brain cDNA clo...    59   2e-07
(O86835) RecName: Full=Uncharacterized zinc protease SCO5738;   ...    59   2e-07
AM999887_590(AM999887|pid:none) Wolbachia endosymbiont of Culex ...    59   2e-07
CP000820_1175(CP000820|pid:none) Frankia sp. EAN1pec, complete g...    59   2e-07
(P32551) RecName: Full=Cytochrome b-c1 complex subunit 2, mitoch...    59   2e-07
AY281352_13(AY281352|pid:none) Uncultured Acidobacteria bacteriu...    59   2e-07
S51590(S51590) mitochondrial processing peptidase (EC 3.4.24.64)...    59   3e-07
CP000817_1559(CP000817|pid:none) Lysinibacillus sphaericus C3-41...    58   4e-07
FM992692_167(FM992692|pid:none) Candida dubliniensis CD36 chromo...    58   4e-07
FN357845_4(FN357845|pid:none) Schistosoma mansoni genome sequenc...    58   5e-07
CP001488_473(CP001488|pid:none) Brucella melitensis ATCC 23457 c...    58   5e-07
AE017223_473(AE017223|pid:none) Brucella abortus biovar 1 str. 9...    58   5e-07
CP000661_615(CP000661|pid:none) Rhodobacter sphaeroides ATCC 170...    58   5e-07
BA000004_2405(BA000004|pid:none) Bacillus halodurans C-125 DNA, ...    58   5e-07
FN357845_3(FN357845|pid:none) Schistosoma mansoni genome sequenc...    58   5e-07
AB478515_5(AB478515|pid:none) Wolbachia endosymbiont of Cadra ca...    58   5e-07
AB049578_1(AB049578|pid:none) Morus alba a-MPP mRNA for mitochon...    57   7e-07
A32629(A32629) ubiquinol-cytochrome-c reductase (EC 1.10.2.2) co...    57   7e-07
FN314742_1(FN314742|pid:none) Schistosoma japonicum isolate Anhu...    57   7e-07
CP000750_1463(CP000750|pid:none) Kineococcus radiotolerans SRS30...    57   7e-07
AK069568_1(AK069568|pid:none) Oryza sativa Japonica Group cDNA c...    57   7e-07
CP000708_451(CP000708|pid:none) Brucella ovis ATCC 25840 chromos...    57   7e-07
CP000377_2328(CP000377|pid:none) Silicibacter sp. TM1040, comple...    57   9e-07
FN392321_841(FN392321|pid:none) Pichia pastoris GS115 chromosome...    57   1e-06
CP000908_3211(CP000908|pid:none) Methylobacterium extorquens PA1...    56   1e-06
CP000930_2233(CP000930|pid:none) Heliobacterium modesticaldum Ic...    56   2e-06
AK007669_1(AK007669|pid:none) Mus musculus 10 day old male pancr...    56   2e-06
CP000481_1503(CP000481|pid:none) Acidothermus cellulolyticus 11B...    55   3e-06
CP000524_391(CP000524|pid:none) Bartonella bacilliformis KC583, ...    55   3e-06
CR382137_816(CR382137|pid:none) Debaryomyces hansenii strain CBS...    55   3e-06
CP001298_3427(CP001298|pid:none) Methylobacterium chloromethanic...    54   6e-06
CP001029_3404(CP001029|pid:none) Methylobacterium populi BJ001, ...    54   6e-06
AL592301_14(AL592301|pid:none) Human DNA sequence from clone RP1...    54   6e-06
CP000143_413(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 ch...    54   6e-06
CP000577_477(CP000577|pid:none) Rhodobacter sphaeroides ATCC 170...    54   6e-06
(P23004) RecName: Full=Cytochrome b-c1 complex subunit 2, mitoch...    54   6e-06
CP000390_754(CP000390|pid:none) Mesorhizobium sp. BNC1, complete...    54   6e-06
CP001322_4712(CP001322|pid:none) Desulfatibacillum alkenivorans ...    54   7e-06
CP000235_90(CP000235|pid:none) Anaplasma phagocytophilum HZ, com...    54   1e-05
CP000088_783(CP000088|pid:none) Thermobifida fusca YX, complete ...    53   1e-05
AC025726_20(AC025726|pid:none) Caenorhabditis elegans cosmid Y71...    53   1e-05
CP000359_2209(CP000359|pid:none) Deinococcus geothermalis DSM 11...    53   2e-05
AY680551_1(AY680551|pid:none) Macaca mulatta clone ss1_c03_t7_34...    52   2e-05
BA000043_1271(BA000043|pid:none) Geobacillus kaustophilus HTA426...    52   2e-05
CP000431_6670(CP000431|pid:none) Rhodococcus jostii RHA1, comple...    52   3e-05
CP000568_415(CP000568|pid:none) Clostridium thermocellum ATCC 27...    52   3e-05
CP000031_3000(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple...    52   3e-05
CP001150_139(CP001150|pid:none) Rhodobacter sphaeroides KD131 ch...    52   4e-05
AP011115_6722(AP011115|pid:none) Rhodococcus opacus B4 DNA, comp...    52   4e-05
(Q1RJ61) RecName: Full=Uncharacterized zinc protease RBE_0522;  ...    51   6e-05
AY281356_17(AY281356|pid:none) Uncultured Acidobacteria bacteriu...    51   6e-05
CP000501_231(CP000501|pid:none) Pichia stipitis CBS 6054 chromos...    50   8e-05
CP000557_1112(CP000557|pid:none) Geobacillus thermodenitrificans...    50   1e-04
CP000507_3434(CP000507|pid:none) Shewanella amazonensis SB2B, co...    49   2e-04
AM849034_1181(AM849034|pid:none) Clavibacter michiganensis subsp...    49   2e-04
CP000474_1505(CP000474|pid:none) Arthrobacter aurescens TC1, com...    48   4e-04
(Q4UML9) RecName: Full=Uncharacterized zinc protease RF_0338;   ...    47   7e-04
AM711867_2062(AM711867|pid:none) Clavibacter michiganensis subsp...    47   7e-04
CP000724_2574(CP000724|pid:none) Alkaliphilus metalliredigens QY...    47   0.001
CP000511_2314(CP000511|pid:none) Mycobacterium vanbaalenii PYR-1...    47   0.001
AY332268_1(AY332268|pid:none) Mycobacterium smegmatis strain mc[...    47   0.001
CP001472_55(CP001472|pid:none) Acidobacterium capsulatum ATCC 51...    47   0.001
CP000264_3148(CP000264|pid:none) Jannaschia sp. CCS1, complete g...    47   0.001
DQ147982_1(DQ147982|pid:none) Macaca mulatta clone dl1_b23_t7_11...    46   0.002
CP000239_2069(CP000239|pid:none) Synechococcus sp. JA-3-3Ab, com...    46   0.002
AP006618_3901(AP006618|pid:none) Nocardia farcinica IFM 10152 DN...    46   0.002
AE017355_3506(AE017355|pid:none) Bacillus thuringiensis serovar ...    45   0.003
CP000227_3489(CP000227|pid:none) Bacillus cereus Q1, complete ge...    45   0.003
CP000485_3247(CP000485|pid:none) Bacillus thuringiensis str. Al ...    45   0.003
AE017194_3812(AE017194|pid:none) Bacillus cereus ATCC 10987, com...    45   0.003
CP000891_4232(CP000891|pid:none) Shewanella baltica OS195, compl...    45   0.003
CP000927_4479(CP000927|pid:none) Caulobacter sp. K31, complete g...    45   0.003
CP000563_204(CP000563|pid:none) Shewanella baltica OS155, comple...    45   0.003
CP000001_3527(CP000001|pid:none) Bacillus cereus E33L, complete ...    45   0.003
CP000909_2578(CP000909|pid:none) Chloroflexus aurantiacus J-10-f...    45   0.005
AE016877_3616(AE016877|pid:none) Bacillus cereus ATCC 14579, com...    45   0.005
CP001186_3816(CP001186|pid:none) Bacillus cereus G9842, complete...    45   0.005
CP001337_28(CP001337|pid:none) Chloroflexus aggregans DSM 9485, ...    44   0.006
AB169781_1(AB169781|pid:none) Macaca fascicularis brain cDNA, cl...    44   0.006
CP001114_2482(CP001114|pid:none) Deinococcus deserti VCD115, com...    44   0.006
AE016958_2890(AE016958|pid:none) Mycobacterium avium subsp. para...    44   0.006
CP000469_3913(CP000469|pid:none) Shewanella sp. ANA-3, complete ...    44   0.006
CP000764_2317(CP000764|pid:none) Bacillus cereus subsp. cytotoxi...    44   0.008
CP000607_331(CP000607|pid:none) Chlorobium phaeovibrioides DSM 2...    44   0.008
CP001078_1160(CP001078|pid:none) Clostridium botulinum E3 str. A...    44   0.010
CP000454_1428(CP000454|pid:none) Arthrobacter sp. FB24, complete...    44   0.010
CP001341_1427(CP001341|pid:none) Arthrobacter chlorophenolicus A...    44   0.010
CP000821_261(CP000821|pid:none) Shewanella sediminis HAW-EB3, co...    43   0.013
CP001056_1213(CP001056|pid:none) Clostridium botulinum B str. Ek...    43   0.013
CP000503_447(CP000503|pid:none) Shewanella sp. W3-18-1, complete...    43   0.017
CP001001_1770(CP001001|pid:none) Methylobacterium radiotolerans ...    43   0.017
CP000847_299(CP000847|pid:none) Rickettsia akari str. Hartford, ...    43   0.017
(P0A5S8) RecName: Full=Uncharacterized zinc protease Rv2782c/MT2...    42   0.029
CP000447_303(CP000447|pid:none) Shewanella frigidimarina NCIMB 4...    42   0.029
CP001612_235(CP001612|pid:none) Rickettsia africae ESF-5, comple...    42   0.029
CP000766_320(CP000766|pid:none) Rickettsia rickettsii str. Iowa,...    41   0.065
CP001227_212(CP001227|pid:none) Rickettsia peacockii str. Rustic...    41   0.065
CP000667_1364(CP000667|pid:none) Salinispora tropica CNB-440, co...    41   0.065
CP000606_3574(CP000606|pid:none) Shewanella loihica PV-4, comple...    40   0.11
CP000931_319(CP000931|pid:none) Shewanella halifaxensis HAW-EB4,...    40   0.11
CP000854_1904(CP000854|pid:none) Mycobacterium marinum M, comple...    40   0.15
FN318033_1(FN318033|pid:none) Schistosoma japonicum isolate Anhu...    39   0.19
CP000769_612(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, co...    39   0.19
AY815834_1(AY815834|pid:none) Schistosoma japonicum SJCHGC01621 ...    39   0.19
AE017180_1584(AE017180|pid:none) Geobacter sulfurreducens PCA, c...    39   0.19
CP000159_1596(CP000159|pid:none) Salinibacter ruber DSM 13855, c...    39   0.25
AL954747_971(AL954747|pid:none) Nitrosomonas europaea ATCC 19718...    39   0.32
CP000683_213(CP000683|pid:none) Rickettsia massiliae MTU5, compl...    39   0.32
EU441785_1(EU441785|pid:none) Xenopus borealis clone Pmpcb.b3 pe...    39   0.32
CP000830_362(CP000830|pid:none) Dinoroseobacter shibae DFL 12, c...    38   0.42
EF575876_1(EF575876|pid:none) Oryza sativa (indica cultivar-grou...    38   0.42
CP000851_3929(CP000851|pid:none) Shewanella pealeana ATCC 700345...    38   0.55
CP000362_616(CP000362|pid:none) Roseobacter denitrificans OCh 11...    38   0.55
CP001359_599(CP001359|pid:none) Anaeromyxobacter dehalogenans 2C...    37   0.72
BX294149_155(BX294149|pid:none) Rhodopirellula baltica SH 1 comp...    37   0.72
AP009380_2034(AP009380|pid:none) Porphyromonas gingivalis ATCC 3...    37   0.72
CP000489_2681(CP000489|pid:none) Paracoccus denitrificans PD1222...    37   0.72
CP000251_574(CP000251|pid:none) Anaeromyxobacter dehalogenans 2C...    37   0.72
CP000655_1916(CP000655|pid:none) Polynucleobacter necessarius su...    37   0.94
CP000473_7415(CP000473|pid:none) Solibacter usitatus Ellin6076, ...    37   0.94
CP000777_1443(CP000777|pid:none) Leptospira biflexa serovar Pato...    37   1.2
CP001291_3529(CP001291|pid:none) Cyanothece sp. PCC 7424, comple...    37   1.2
CP001032_4608(CP001032|pid:none) Opitutus terrae PB90-1, complet...    37   1.2
CP001010_1374(CP001010|pid:none) Polynucleobacter necessarius su...    36   2.1
BX842656_268(BX842656|pid:none) Bdellovibrio bacteriovorus compl...    35   2.7
CP001287_2639(CP001287|pid:none) Cyanothece sp. PCC 8801, comple...    35   2.7
CP000159_1210(CP000159|pid:none) Salinibacter ruber DSM 13855, c...    35   4.7
CP000943_3940(CP000943|pid:none) Methylobacterium sp. 4-46, comp...    35   4.7
D88363_1(D88363|pid:none) Gallus gallus mRNA for Mitf, complete ...    34   6.1
AE016823_748(AE016823|pid:none) Leptospira interrogans serovar C...    34   6.1
FJ196874_2(FJ196874|pid:none) Gallus gallus microphthalmia-assoc...    34   6.1
AE010300_3398(AE010300|pid:none) Leptospira interrogans serovar ...    34   6.1
CP000494_4015(CP000494|pid:none) Bradyrhizobium sp. BTAi1, compl...    34   8.0
CP001230_1407(CP001230|pid:none) Persephonella marina EX-H1, com...    34   8.0

>AE014297_1984(AE014297|pid:none) Drosophila melanogaster chromosome
           3R, complete sequence.
           &AE014297_1985(AE014297|pid:none)
           &AY058243_1(AY058243|pid:none)
           &FJ630887_1(FJ630887|pid:none)
           &FJ635794_1(FJ635794|pid:none)
          Length = 470

 Score =  189 bits (479), Expect = 1e-46
 Identities = 93/211 (44%), Positives = 128/211 (60%)
 Frame = +1

Query: 28  FIGSELRVRDDEQPLIHFAVAVRALPWTDPDYFVLELIQTMIGNWNRGIAAGKNIASNLG 207
           F GSE+RVRDD  PL H A+AV    WTD D   L +  T++G W+R    G N ASNL
Sbjct: 260 FTGSEVRVRDDSLPLAHVAIAVEGCGWTDQDNIPLMVANTLVGAWDRSQGGGANNASNLA 319

Query: 208 EIVATEDLAESYSTFFTCYQDTGLFGNYGVCQPERVDDLVAEMLKEWQGIATSCNKNEVE 387
              A ++L  S+ +F TCY+DTGL+G Y VC P + +D++  +  EW  + T   + EVE
Sbjct: 320 RASAEDNLCHSFQSFNTCYKDTGLWGIYFVCDPLQCEDMLFNVQTEWMRLCTMVTEAEVE 379

Query: 388 RNKQKLLATTLMQYDGTSKVCEGIGRQILTLGRRLSPFEVYTRINEITVADVQRVASTLL 567
           R K  L    L+Q DGT+ +CE IGRQIL   RR+   E+  RI+ ++V +V+ VA   +
Sbjct: 380 RAKNLLKTNMLLQLDGTTPICEDIGRQILCYNRRIPLHELEQRIDAVSVGNVRDVAMKYI 439

Query: 568 RDVSPAVTAIGPIANYPDYNFVKGWTYWNRL 660
            D  PAV A+GP+ N PDYN ++   YW R+
Sbjct: 440 YDRCPAVAAVGPVENLPDYNRIRSSMYWLRV 470

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 1,223,876,975
Number of extensions: 22572541
Number of successful extensions: 54301
Number of sequences better than 10.0: 299
Number of HSP's gapped: 54173
Number of HSP's successfully gapped: 299
Length of query: 308
Length of database: 1,040,966,779
Length adjustment: 128
Effective length of query: 180
Effective length of database: 630,818,299
Effective search space: 113547293820
Effective search space used: 113547293820
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

 psg: 0.69  gvh: 0.51  alm: 0.45  top: 0.53  tms: 0.00  mit: 0.28  mip: 0.02
 nuc: 0.00  erl: 0.00  erm: 0.20  pox: 0.30  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 48.0 %: cytoplasmic
	 32.0 %: nuclear
	 16.0 %: mitochondrial
	  4.0 %: cytoskeletal

>> prediction for Contig-U05833-1 is cyt