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Dicty_cDB
Contig List | Clone List | cDNA Library List
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NBDC - LSDB Archive
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Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U05758-1
Contig ID Contig-U05758-1
Contig update 2002. 9.13
Contig sequence 
>Contig-U05758-1 (Contig-U05758-1Q) /CSM_Contig/Contig-U05758-1Q.Seq.d
AATGAACAACCTAATTAGTAAATTCAATAAAATTATTTATTTGAATGCAA
CCAAACAAACAAATAAAATTAATTGTAGTTTTTATTCAACAACAATAAAT
AACAATAACAATAATAATAATAATAATAATAATAACAATATTTCAAATAA
AAAAAGCTGAAATGAGTAAGGAAAATCAACAACTTTTACAAGATTTAGAA
GAAGAATTTGACGAAGATGAATTTAAACCATATGTTAATCCAATAACAAA
AGAAATTGGTGGACCAAAAGGCCCAGAACCAACCAGATATAATGATTGGG
AAAGAAATGGAAGGGTATCTGACTTTTAAAATCACCCCTCCCCAAAAAAA
Gap no gap
Contig length 350
Chromosome number (1..6, M) 3
Chromosome length 6358359
Start point 900580
End point 900230
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 2
Link to clone list U05758
List of clone(s) 

est1=SSL290F,1,351
est2=SSL290Z,11,344
Translated Amino Acid sequence 
*tt*lvnsiklfi*mqpnkqiklivvfiqqq*ITITIIIIIIIITIFQIKKAEMSKENQQ
LLQDLEEEFDEDEFKPYVNPITKEIGGPKGPEPTRYNDWERNGRVSDF*nhpspkk
Translated Amino Acid sequence (All Frames) 
Frame A:
neqpn**iq*nylfecnqtnk*n*l*flfnnnk*q*q********qyfk*kklk*vrkin
nfyki*kknltkmnlnhmliq*qkklvdqkaqnqpdimigkemegyltfkitppqk


Frame B:
mnnliskfnkiiylnatkqtnkincsfysttinnnnnnnnnnnnnnisnkks*ne*gkst
tftrfrrri*rr*i*tic*snnkrnwwtkrprtnqi**lgkkwkgi*llksplpkk


Frame C:
*tt*lvnsiklfi*mqpnkqiklivvfiqqq*ITITIIIIIIIITIFQIKKAEMSKENQQ
LLQDLEEEFDEDEFKPYVNPITKEIGGPKGPEPTRYNDWERNGRVSDF*nhpspkk
own update 2004. 6.10
Homology vs CSM-cDNA 
Query= Contig-U05758-1 (Contig-U05758-1Q)
/CSM_Contig/Contig-U05758-1Q.Seq.d
         (350 letters)

Database: CSM
           6905 sequences; 5,674,871 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U05758-1 (Contig-U05758-1Q) /CSM_Contig/Conti...   373  e-104
Contig-U14815-1 (Contig-U14815-1Q) /CSM_Contig/Conti...    36  0.024
Contig-U11928-1 (Contig-U11928-1Q) /CSM_Contig/Conti...    36  0.024
Contig-U11837-1 (Contig-U11837-1Q) /CSM_Contig/Conti...    36  0.024
Contig-U10536-1 (Contig-U10536-1Q) /CSM_Contig/Conti...    36  0.024
Contig-U09314-1 (Contig-U09314-1Q) /CSM_Contig/Conti...    36  0.024
Contig-U04312-1 (Contig-U04312-1Q) /CSM_Contig/Conti...    36  0.024
Contig-U02225-1 (Contig-U02225-1Q) /CSM_Contig/Conti...    36  0.024
Contig-U14800-1 (Contig-U14800-1Q) /CSM_Contig/Conti...    34  0.095
Contig-U12999-1 (Contig-U12999-1Q) /CSM_Contig/Conti...    34  0.095

>Contig-U05758-1 (Contig-U05758-1Q) /CSM_Contig/Contig-U05758-1Q.Seq.d
          Length = 350

 Score =  373 bits (188), Expect = e-104
 Identities = 188/188 (100%)
 Strand = Plus / Plus

                                                                       
Query: 156 gctgaaatgagtaaggaaaatcaacaacttttacaagatttagaagaagaatttgacgaa 215
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 gctgaaatgagtaaggaaaatcaacaacttttacaagatttagaagaagaatttgacgaa 215

                                                                       
Query: 216 gatgaatttaaaccatatgttaatccaataacaaaagaaattggtggaccaaaaggccca 275
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gatgaatttaaaccatatgttaatccaataacaaaagaaattggtggaccaaaaggccca 275

                                                                       
Query: 276 gaaccaaccagatataatgattgggaaagaaatggaagggtatctgacttttaaaatcac 335
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gaaccaaccagatataatgattgggaaagaaatggaagggtatctgacttttaaaatcac 335

                   
Query: 336 ccctcccc 343
           ||||||||
Sbjct: 336 ccctcccc 343


 Score =  184 bits (93), Expect = 4e-47
 Identities = 93/93 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  aatgaacaacctaattagtaaattcaataaaattatttatttgaatgcaaccaaacaaac 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  aatgaacaacctaattagtaaattcaataaaattatttatttgaatgcaaccaaacaaac 60

                                           
Query: 61 aaataaaattaattgtagtttttattcaacaac 93
          |||||||||||||||||||||||||||||||||
Sbjct: 61 aaataaaattaattgtagtttttattcaacaac 93


>Contig-U14815-1 (Contig-U14815-1Q) /CSM_Contig/Contig-U14815-1Q.Seq.d
          Length = 1163

 Score = 36.2 bits (18), Expect = 0.024
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                
Query: 53 aaacaaacaaataaaattaatt 74
          ||||||||||||||||| ||||
Sbjct: 16 aaacaaacaaataaaataaatt 37


>Contig-U11928-1 (Contig-U11928-1Q) /CSM_Contig/Contig-U11928-1Q.Seq.d
          Length = 911

 Score = 36.2 bits (18), Expect = 0.024
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                            
Query: 25 caataaaattatttattt 42
          ||||||||||||||||||
Sbjct: 8  caataaaattatttattt 25


  Database: CSM
    Posted date:  Jun 9, 2004  7:35 PM
  Number of letters in database: 5,674,871
  Number of sequences in database:  6905
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7416
Number of Sequences: 6905
Number of extensions: 7416
Number of successful extensions: 956
Number of sequences better than 10.0: 370
length of query: 350
length of database: 5,674,871
effective HSP length: 16
effective length of query: 334
effective length of database: 5,564,391
effective search space: 1858506594
effective search space used: 1858506594
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2008.11. 6
Homology vs DNA 
Query= Contig-U05758-1 (Contig-U05758-1Q) /CSM_Contig/Contig-U05758-1Q.Seq.d
         (350 letters)

Database: ddbj_A
           92,845,959 sequences; 95,242,211,685 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AU038643) Dictyostelium discoideum slug cDNA, clone SSL290.      373   e-114  2
(AU074574) Dictyostelium discoideum slug cDNA, clone SSL290.      168   6e-59  2
(CN212021) rzhswab0_002436 Silkworm posterior silkgland libr...    70   6e-08  1
(CK540558) rswhb0_004163.y1 swh Bombyx mori cDNA, mRNA seque...    70   6e-08  1
(CK536424) rswgb0_005189.y1 swg Bombyx mori cDNA, mRNA seque...    70   6e-08  1
(BY939481) Bombyx mori cDNA, clone:E_FL_e100_22I09_F_0, 5' e...    70   6e-08  1
(BP183634) Bombyx mori cDNA, clone: P5PG0156, 5' end sequence.     70   6e-08  1
(BP116820) Bombyx mori cDNA, clone:brS-0632, 5' end sequence.      70   6e-08  1
(BY934926) Bombyx mori cDNA, clone:E_FL_prW-_02I09_F_0, 5' e...    62   1e-05  1
(DE528651) Bombyx mori genomic DNA, Fosmid clone:GBMFno151_d...    38   2e-04  2
(CZ173067) MIAA-24G23b.g1 Meloidogyne incognita BAC end sequ...    58   2e-04  1
(CN577956) re48f02.y1 Meloidogyne incognita female SMART pGE...    58   2e-04  1
(BE578706) rk01c01.y1 Meloidogyne javanica Egg SL1 Topo1 Klo...    58   2e-04  1
(EK168085) 1095458062394 Global-Ocean-Sampling_GS-31-01-01-1...    28   0.003  5
(FK908338) EST_lsal_evj_932657 lsalevj mixed_tissue_mixed_st...    42   0.005  3
(AE017244) Mycoplasma hyopneumoniae 7448, complete genome.         40   0.008  2
(AE017243) Mycoplasma hyopneumoniae J, complete genome.            40   0.008  2
(AE017332) Mycoplasma hyopneumoniae 232, complete genome.          40   0.008  2
(FK924225) EST_lsal_evj_957009 lsalevj mixed_tissue_mixed_st...    42   0.011  2
(FK912351) EST_lsal_evj_938984 lsalevj mixed_tissue_mixed_st...    42   0.011  2
(FK908339) EST_lsal_evj_939569 lsalevj mixed_tissue_mixed_st...    42   0.011  2
(FK912352) EST_lsal_evj_933224 lsalevj mixed_tissue_mixed_st...    42   0.011  2
(EJ498933) 1095403604591 Global-Ocean-Sampling_GS-28-01-01-1...    52   0.013  1
(EJ158374) 1092344038381 Global-Ocean-Sampling_GS-27-01-01-1...    52   0.013  1
(DE420699) Bombyx mori genomic DNA, BAC clone:20K9C.               50   0.052  1
(CK426687) rx19a05.y1 Meloidogyne paranaensis egg SMART pGEM...    50   0.052  1
(AC171871) Bos taurus clone CH240-307J2, WORKING DRAFT SEQUE...    46   0.19   2
(AM464344) Vitis vinifera contig VV78X137023.6, whole genome...    48   0.21   1
(EJ771804) 1092970300557 Global-Ocean-Sampling_GS-30-02-01-1...    48   0.21   1
(AC162468) Bos taurus clone CH240-120B17, WORKING DRAFT SEQU...    46   0.81   1
(AC223002) Bos taurus clone CH240-432J2, WORKING DRAFT SEQUE...    46   0.81   1
(ET737655) CHO_OF135xi08f1.ab1 CHO_OF Nicotiana tabacum geno...    46   0.81   1
(CZ938965) 258993 Tomato EcoRI BAC Library Solanum lycopersi...    46   0.81   1
(FF625889) G825P5318RF10.T0 Acorn worm normalized gastrula p...    46   0.81   1
(FF625888) G825P5318FF10.T0 Acorn worm normalized gastrula p...    46   0.81   1
(FF609143) G825P5144RH4.T0 Acorn worm normalized gastrula pE...    46   0.81   1
(FF514094) G709P570RG1.T0 Acorn worm normalized neurula pExp...    46   0.81   1
(FF514093) G709P570FG1.T0 Acorn worm normalized neurula pExp...    46   0.81   1
(FF504058) G709P5172RE7.T0 Acorn worm normalized neurula pEx...    46   0.81   1
(FF497563) G708P559RF10.T0 Acorn worm normalized gastrula pE...    46   0.81   1
(FF490753) G708P5194RG8.T0 Acorn worm normalized gastrula pE...    46   0.81   1
(FF468121) G613P6014RB9.T0 Acorn worm blastula/gastrula pCMV...    46   0.81   1
(EJ023614) 1095454011703 Global-Ocean-Sampling_GS-26-01-01-1...    40   0.96   2
(DY279906) IC0AAA4CH11RM1 CitNFL Citrus clementina cDNA 5', ...    36   1.2    2
(AF250284) Amsacta moorei entomopoxvirus, complete genome.         36   1.8    3
(CP000123) Mycoplasma capricolum subsp. capricolum ATCC 2734...    36   2.2    8
(EU024841) Fragaria vesca subsp. americana clone fosmid 27F1...    44   3.2    1
(AP010112) Lotus japonicus genomic DNA, clone: LjT48K17, TM0...    44   3.2    1
(AC231494) Oryza minuta clone OM__Ba0239I09, *** SEQUENCING ...    44   3.2    1
(AC220921) Oryza officinalis clone OO__Ba0124A02, *** SEQUEN...    44   3.2    1
(AC216928) Oryza officinalis clone OO__Ba0035A09, *** SEQUEN...    44   3.2    1
(AC210779) Zea mays chromosome 5 clone CH201-175F11; ZMMBBc0...    44   3.2    1
(BH501169) BOHCQ91TF BOHC Brassica oleracea genomic clone BO...    44   3.2    1
(EK343514) 1095467101462 Global-Ocean-Sampling_GS-31-01-01-1...    44   3.2    1
(EK074966) 1092961024064 Global-Ocean-Sampling_GS-31-01-01-1...    44   3.2    1
(EK074427) 1092961020402 Global-Ocean-Sampling_GS-31-01-01-1...    44   3.2    1
(CZ815038) OC__Ba0191E08.f OC__Ba Oryza coarctata genomic cl...    44   3.2    1
(CZ531008) SRAA-aac70d09.g1 Strongyloides ratti whole genome...    44   3.2    1
(CC749855) ZMMBBb0130A24.f ZMMBBb Zea mays subsp. mays genom...    44   3.2    1
(BZ980433) PUFJV73TD ZM_0.6_1.0_KB Zea mays genomic clone ZM...    44   3.2    1
(ES349891) PPMGS85 P. papatasi adult female unfed/sugar fed ...    44   3.2    1
(EB322164) CNSN01-F-088844-501 Normalized CNS library (juven...    44   3.2    1
(BG225501) kp68f05.y1 TBN95TM-SSFH Strongyloides stercoralis...    44   3.2    1
(FG225564) Aats02834 Antheraea assama fifth instar larval te...    44   3.2    1
(AP008146) Lotus japonicus genomic DNA, chromosome 6, clone:...    42   6.3    2
(CN578243) re52a10.y1 Meloidogyne incognita female SMART pGE...    38   8.1    2
(AC222067) Bos taurus clone CH240-373F18, WORKING DRAFT SEQU...    34   9.1    4

>(AU038643) Dictyostelium discoideum slug cDNA, clone SSL290.
          Length = 334

 Score =  373 bits (188), Expect(2) = e-114
 Identities = 188/188 (100%)
 Strand = Plus / Plus


Query: 156 gctgaaatgagtaaggaaaatcaacaacttttacaagatttagaagaagaatttgacgaa 215
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 gctgaaatgagtaaggaaaatcaacaacttttacaagatttagaagaagaatttgacgaa 205


Query: 216 gatgaatttaaaccatatgttaatccaataacaaaagaaattggtggaccaaaaggccca 275
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gatgaatttaaaccatatgttaatccaataacaaaagaaattggtggaccaaaaggccca 265


Query: 276 gaaccaaccagatataatgattgggaaagaaatggaagggtatctgacttttaaaatcac 335
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gaaccaaccagatataatgattgggaaagaaatggaagggtatctgacttttaaaatcac 325


Query: 336 ccctcccc 343
           ||||||||
Sbjct: 326 ccctcccc 333

 Score = 73.8 bits (37), Expect(2) = e-114
 Identities = 37/37 (100%)
 Strand = Plus / Plus


Query: 11 ctaattagtaaattcaataaaattatttatttgaatg 47
          |||||||||||||||||||||||||||||||||||||
Sbjct: 1  ctaattagtaaattcaataaaattatttatttgaatg 37

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 92845959
Number of Hits to DB: 350,949,503
Number of extensions: 22967325
Number of successful extensions: 1963211
Number of sequences better than 10.0: 67
Length of query: 350
Length of database: 95,242,211,685
Length adjustment: 23
Effective length of query: 327
Effective length of database: 93,106,754,628
Effective search space: 30445908763356
Effective search space used: 30445908763356
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)
protein update 2009. 6.20
Homology vs Protein 
Query= Contig-U05758-1 (Contig-U05758-1Q) /CSM_Contig/Contig-U05758-1Q.Seq.d
         (350 letters)

Database: nrp_A
           3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

(Q54Y25) RecName: Full=UPF0369 protein;                                91   3e-31
EF145534_1(EF145534|pid:none) Populus trichocarpa clone WS01125_...    61   1e-08
(Q8BTE0) RecName: Full=UPF0369 protein C6orf57 homolog; Flags: P...    60   2e-08
AM488161_1(AM488161|pid:none) Vitis vinifera contig VV78X054704....    60   2e-08
AK015824_1(AK015824|pid:none) Mus musculus adult male testis cDN...    60   2e-08
AK003789_1(AK003789|pid:none) Mus musculus 18-day embryo whole b...    60   2e-08
(Q5VUM1) RecName: Full=UPF0369 protein C6orf57; Flags: Precursor...    59   4e-08
AF531928_1(AF531928|pid:none) Drosophila yakuba CG7224 mRNA, par...    59   4e-08
AE014134_1437(AE014134|pid:none) Drosophila melanogaster chromos...    59   4e-08
BC082498_1(BC082498|pid:none) Xenopus tropicalis MGC89089 protei...    59   5e-08
AK121504_1(AK121504|pid:none) Oryza sativa Japonica Group cDNA c...    59   5e-08
CP000453_1321(CP000453|pid:none) Alkalilimnicola ehrlichii MLHE-...    58   9e-08
CP000230_3567(CP000230|pid:none) Rhodospirillum rubrum ATCC 1117...    57   2e-07
AF003141_9(AF003141|pid:none) Caenorhabditis elegans cosmid W02D...    57   2e-07
BX950184_3(BX950184|pid:none) Zebrafish DNA sequence from clone ...    57   2e-07
AL929231_2(AL929231|pid:none) Zebrafish DNA sequence from clone ...    57   2e-07
EU957351_1(EU957351|pid:none) Zea mays clone 1589511 hypothetica...    57   3e-07
AY086451_1(AY086451|pid:none) Arabidopsis thaliana clone 2518 mR...    56   4e-07
EF085697_1(EF085697|pid:none) Picea sitchensis clone WS02921_N24...    55   8e-07
AM920689_2070(AM920689|pid:none) Xanthomonas campestris pv. camp...    53   3e-06
AE008923_2039(AE008923|pid:none) Xanthomonas axonopodis pv. citr...    53   3e-06
CP000050_1949(CP000050|pid:none) Xanthomonas campestris pv. camp...    53   3e-06
CU234118_324(CU234118|pid:none) Bradyrhizobium sp. ORS278,comple...    51   1e-05
FN357451_12(FN357451|pid:none) Schistosoma mansoni genome sequen...    50   2e-05
CR954201_526(CR954201|pid:none) Ostreococcus tauri strain OTTH05...    50   2e-05
CP000494_313(CP000494|pid:none) Bradyrhizobium sp. BTAi1, comple...    50   3e-05
CP000613_2294(CP000613|pid:none) Rhodospirillum centenum SW, com...    49   4e-05
CP001576_19(CP001576|pid:none) Micromonas sp. RCC299 chromosome ...    49   4e-05
CU459003_182(CU459003|pid:none) Magnetospirillum gryphiswaldense...    49   7e-05
CP001196_329(CP001196|pid:none) Oligotropha carboxidovorans OM5 ...    49   7e-05
CP000115_155(CP000115|pid:none) Nitrobacter winogradskyi Nb-255,...    47   2e-04
CP000847_226(CP000847|pid:none) Rickettsia akari str. Hartford, ...    47   2e-04
CP001016_2034(CP001016|pid:none) Beijerinckia indica subsp. indi...    47   3e-04
CP001227_815(CP001227|pid:none) Rickettsia peacockii str. Rustic...    46   3e-04
(Q92J60) RecName: Full=UPF0369 protein RC0209;  &A97726(A97726) ...    46   3e-04
(Q4UKG8) RecName: Full=UPF0369 protein RF_1112;  &CP000053_1112(...    46   3e-04
CP000087_1140(CP000087|pid:none) Rickettsia bellii RML369-C, com...    46   3e-04
CP000463_29(CP000463|pid:none) Rhodopseudomonas palustris BisA53...    46   3e-04
CP000848_223(CP000848|pid:none) Rickettsia rickettsii str. 'Shei...    46   3e-04
CP001612_179(CP001612|pid:none) Rickettsia africae ESF-5, comple...    46   3e-04
CP000766_236(CP000766|pid:none) Rickettsia rickettsii str. Iowa,...    46   3e-04
CP000683_162(CP000683|pid:none) Rickettsia massiliae MTU5, compl...    45   6e-04
CP000250_87(CP000250|pid:none) Rhodopseudomonas palustris HaA2, ...    45   8e-04
CP000283_714(CP000283|pid:none) Rhodopseudomonas palustris BisB5...    45   8e-04
(Q9ZDZ6) RecName: Full=UPF0369 protein RP167;  &AJ235270_161(AJ2...    45   0.001
CP000031_3300(CP000031|pid:none) Ruegeria pomeroyi DSS-3, comple...    43   0.003
CP000449_2907(CP000449|pid:none) Maricaulis maris MCS10, complet...    43   0.004
CP001150_2501(CP001150|pid:none) Rhodobacter sphaeroides KD131 c...    41   0.011
CP001280_1405(CP001280|pid:none) Methylocella silvestris BL2, co...    41   0.011
CP000158_3305(CP000158|pid:none) Hyphomonas neptunium ATCC 15444...    41   0.011
CP000143_2721(CP000143|pid:none) Rhodobacter sphaeroides 2.4.1 c...    41   0.011
CP000362_609(CP000362|pid:none) Roseobacter denitrificans OCh 11...    41   0.011
CP000264_4039(CP000264|pid:none) Jannaschia sp. CCS1, complete g...    40   0.019
CP000830_3018(CP000830|pid:none) Dinoroseobacter shibae DFL 12, ...    40   0.033
(P38345) RecName: Full=Protein FMP21, mitochondrial; AltName: Fu...    39   0.043
AE016818_178(AE016818|pid:none) Ashbya gossypii (= Eremothecium ...    39   0.043
CU633453_115(CU633453|pid:none) Podospora anserina genomic DNA c...    39   0.043
CP000390_3382(CP000390|pid:none) Mesorhizobium sp. BNC1, complet...    39   0.056
CP000927_4759(CP000927|pid:none) Caulobacter sp. K31, complete g...    39   0.056
CP001111_1534(CP001111|pid:none) Stenotrophomonas maltophilia R5...    39   0.073
BA000012_3154(BA000012|pid:none) Mesorhizobium loti MAFF303099 D...    39   0.073
CR380955_400(CR380955|pid:none) Candida glabrata strain CBS138 c...    39   0.073
CR382126_69(CR382126|pid:none) Kluyveromyces lactis strain NRRL ...    38   0.095
AE009442_321(AE009442|pid:none) Xylella fastidiosa Temecula1, co...    38   0.12
CP000941_337(CP000941|pid:none) Xylella fastidiosa M12, complete...    38   0.12
AE005673_102(AE005673|pid:none) Caulobacter crescentus CB15, com...    38   0.12
CP000628_3730(CP000628|pid:none) Agrobacterium radiobacter K84 c...    38   0.12
CP000774_1325(CP000774|pid:none) Parvibaculum lavamentivorans DS...    37   0.21
AM889285_3446(AM889285|pid:none) Gluconacetobacter diazotrophicu...    36   0.36
CP000758_1079(CP000758|pid:none) Ochrobactrum anthropi ATCC 4918...    36   0.36
CU928180_449(CU928180|pid:none) Kluyveromyces thermotolerans str...    36   0.47
AM270008_6(AM270008|pid:none) Aspergillus niger contig An02c0130...    36   0.47
AM920435_1480(AM920435|pid:none) Penicillium chrysogenum Wiscons...    35   0.62
AP007159_352(AP007159|pid:none) Aspergillus oryzae RIB40 genomic...    35   0.62
CR382127_73(CR382127|pid:none) Yarrowia lipolytica strain CLIB12...    35   0.80
AM260525_2023(AM260525|pid:none) Bartonella tribocorum CIP 10547...    34   1.4
BX897699_1545(BX897699|pid:none) Bartonella henselae strain Hous...    34   1.4
CP000524_69(CP000524|pid:none) Bartonella bacilliformis KC583, c...    34   1.4
CP001349_5013(CP001349|pid:none) Methylobacterium nodulans ORS 2...    34   1.8
CP000943_2786(CP000943|pid:none) Methylobacterium sp. 4-46, comp...    34   1.8
AL591688_3345(AL591688|pid:none) Sinorhizobium meliloti 1021 com...    33   2.3
CP000157_2260(CP000157|pid:none) Erythrobacter litoralis HTCC259...    33   2.3
CP001191_3878(CP001191|pid:none) Rhizobium leguminosarum bv. tri...    33   3.1
FM992689_239(FM992689|pid:none) Candida dubliniensis CD36 chromo...    33   3.1
AC099045_9(AC099045|pid:none) Trypanosoma brucei chromosome 8 cl...    32   5.2

>(Q54Y25) RecName: Full=UPF0369 protein;
          Length = 108

 Score = 90.5 bits (223), Expect(2) = 3e-31
 Identities = 43/59 (72%), Positives = 43/59 (72%)
 Frame = +3

Query: 150 KKAEMSKENXXXXXXXXXXXXXXXXKPYVNPITKEIGGPKGPEPTRYNDWERNGRVSDF 326
           KKAEMSKEN                KPYVNPITKEIGGPKGPEPTRYNDWERNGRVSDF
Sbjct: 50  KKAEMSKENQQLLQDLEEEFDEDEFKPYVNPITKEIGGPKGPEPTRYNDWERNGRVSDF 108

 Score = 66.6 bits (161), Expect(2) = 3e-31
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = +2

Query: 2  MNNLISKFNKIIYLNATKQTNKINCSFYSTT 94
          MNNLISKFNKIIYLNATKQTNKINCSFYSTT
Sbjct: 1  MNNLISKFNKIIYLNATKQTNKINCSFYSTT 31

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 422,448,113
Number of extensions: 7280130
Number of successful extensions: 18883
Number of sequences better than 10.0: 85
Number of HSP's gapped: 18870
Number of HSP's successfully gapped: 86
Length of query: 116
Length of database: 1,040,966,779
Length adjustment: 83
Effective length of query: 33
Effective length of database: 775,011,124
Effective search space: 25575367092
Effective search space used: 25575367092
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 28 (15.4 bits)
PSORT 

 psg: 1.01  gvh: 0.37  alm: 0.13  top: 0.47  tms: 0.07  mit: 0.27  mip: 0.00
 nuc: 0.00  erl: 0.00  erm: 0.00  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 1.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 1.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 0.00 

	 28.0 %: endoplasmic reticulum
	 20.0 %: nuclear
	 20.0 %: cytoplasmic
	 16.0 %: mitochondrial
	  8.0 %: plasma membrane
	  4.0 %: Golgi
	  4.0 %: vesicles of secretory system

>> prediction for Contig-U05758-1 is end
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0