| Contig-U05726-1 |
| Contig ID |
Contig-U05726-1 |
| Contig update |
2001. 8.30 |
| Contig sequence |
 |
| Gap |
no gap |
| Contig length |
370 |
| Chromosome number (1..6, M) |
2 |
| Chromosome length |
8467578 |
| Start point |
4125913 |
| End point |
4125543 |
| Strand (PLUS/MINUS) |
MINUS |
| Number of clones |
1 |
| Number of EST |
1 |
| Link to clone list |
U05726 |
| List of clone(s) |
|
| Translated Amino Acid sequence |
|
| Translated Amino Acid sequence (All Frames) |
|
| own update |
2004. 6.10 |
| Homology vs CSM-cDNA |
|
| dna update |
2009. 8. 3 |
| Homology vs DNA |
|
| protein update |
2009. 6.20 |
| Homology vs Protein |
Query= Contig-U05726-1 (Contig-U05726-1Q) /CSM_Contig/Contig-U05726-1Q.Seq.d
(370 letters)
Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ213955_1(DQ213955|pid:none) Taeniopygia guttata clone 0061P002... 60 2e-08
(Q9BZX2) RecName: Full=Uridine-cytidine kinase 2; Short... 60 2e-08
AB030700_1(AB030700|pid:none) Rattus norvegicus uk mRNA for urid... 60 2e-08
AB062451_1(AB062451|pid:none) Homo sapiens UCK2 mRNA for uridine... 60 2e-08
BC082833_1(BC082833|pid:none) Xenopus laevis hypothetical LOC494... 59 7e-08
EU952606_1(EU952606|pid:none) Zea mays clone 1284326 unknown mRNA. 57 2e-07
EU959693_1(EU959693|pid:none) Zea mays clone 219409 unknown mRNA. 57 2e-07
AC002304_5(AC002304|pid:none) Genomic sequence for Arabidopsis t... 57 3e-07
D78335_1(D78335|pid:none) Homo sapiens mRNA for 5'-terminal regi... 57 3e-07
AK228608_1(AK228608|pid:none) Arabidopsis thaliana mRNA for urac... 57 3e-07
AP003920_7(AP003920|pid:none) Oryza sativa Japonica Group genomi... 55 6e-07
AK102065_1(AK102065|pid:none) Oryza sativa Japonica Group cDNA c... 55 6e-07
AK175542_1(AK175542|pid:none) Arabidopsis thaliana mRNA for puta... 55 8e-07
BT057591_1(BT057591|pid:none) Salmo salar clone ssal-rgb2-575-35... 54 1e-06
(Q7ZV79) RecName: Full=Uridine-cytidine kinase 2-B; Sho... 54 1e-06
(Q7SYM0) RecName: Full=Uridine-cytidine kinase 2-A; Sho... 54 1e-06
AE014297_3662(AE014297|pid:none) Drosophila melanogaster chromos... 54 2e-06
AB011477_10(AB011477|pid:none) Arabidopsis thaliana genomic DNA,... 54 2e-06
CR457281_1(CR457281|pid:none) Homo sapiens full open reading fra... 53 4e-06
(Q66I71) RecName: Full=Uridine-cytidine kinase 1; Short... 53 4e-06
(Q4R4K2) RecName: Full=Uridine-cytidine kinase 1; Short... 53 4e-06
(Q9HA47) RecName: Full=Uridine-cytidine kinase 1; Short... 53 4e-06
AB170445_1(AB170445|pid:none) Macaca fascicularis brain cDNA clo... 53 4e-06
(Q0P5A4) RecName: Full=Uridine-cytidine kinase 1; Short... 53 4e-06
AM456869_1(AM456869|pid:none) Vitis vinifera contig VV78X229720.... 53 4e-06
L31783_1(L31783|pid:none) Mus musculus uridine kinase mRNA, part... 53 4e-06
AK295471_1(AK295471|pid:none) Homo sapiens cDNA FLJ52965 complet... 53 4e-06
(Q6GPD9) RecName: Full=Uridine-cytidine kinase 1-B; Sho... 53 4e-06
(Q6PA79) RecName: Full=Uridine-cytidine kinase 1-A; Sho... 53 4e-06
AL808027_9(AL808027|pid:none) Mouse DNA sequence from clone RP23... 53 4e-06
(P52623) RecName: Full=Uridine-cytidine kinase 1; Short... 53 4e-06
BT056431_1(BT056431|pid:none) Salmo salar clone ssal-evd-550-363... 53 4e-06
AK303688_1(AK303688|pid:none) Homo sapiens cDNA FLJ53265 complet... 50 2e-05
BC146741_1(BC146741|pid:none) Danio rerio similar to URKL1, mRNA... 50 2e-05
AY335675_1(AY335675|pid:none) Synthetic construct Homo sapiens u... 50 2e-05
AB024028_16(AB024028|pid:none) Arabidopsis thaliana genomic DNA,... 50 2e-05
(Q91YL3) RecName: Full=Uridine-cytidine kinase-like 1; ... 50 2e-05
AL831748_2(AL831748|pid:none) Zebrafish DNA sequence from clone ... 49 4e-05
BX649575_6(BX649575|pid:none) Zebrafish DNA sequence from clone ... 49 4e-05
AJ605558_1(AJ605558|pid:none) Homo sapiens mRNA for putative uri... 49 7e-05
BT059390_1(BT059390|pid:none) Salmo salar clone ssal-rgf-518-011... 48 1e-04
BT076419_1(BT076419|pid:none) Caligus rogercresseyi clone crog-e... 47 2e-04
AE013599_2604(AE013599|pid:none) Drosophila melanogaster chromos... 47 2e-04
AE013599_2605(AE013599|pid:none) Drosophila melanogaster chromos... 47 2e-04
(Q17413) RecName: Full=Probable uridine-cytidine kinase; ... 46 4e-04
FN392320_824(FN392320|pid:none) Pichia pastoris GS115 chromosome... 45 6e-04
(Q5KWV3) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 45 0.001
(A4IR72) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 45 0.001
T18629(T18629)hypothetical protein B0001.4 - Caenorhabditis eleg... 45 0.001
(Q5HNT9) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 45 0.001
CR954217_261(CR954217|pid:none) Ostreococcus tauri strain OTTH05... 44 0.001
CP000596_256(CP000596|pid:none) Ostreococcus lucimarinus CCE9901... 44 0.002
AY466381_1(AY466381|pid:none) Chlamydomonas reinhardtii uridine ... 44 0.002
AY812673_1(AY812673|pid:none) Schistosoma japonicum SJCHGC06086 ... 44 0.002
CP000382_1369(CP000382|pid:none) Clostridium novyi NT, complete ... 44 0.002
FN357501_1(FN357501|pid:none) Schistosoma mansoni genome sequenc... 44 0.002
CP000496_721(CP000496|pid:none) Pichia stipitis CBS 6054 chromos... 44 0.002
AM920437_918(AM920437|pid:none) Penicillium chrysogenum Wisconsi... 44 0.002
FN357478_12(FN357478|pid:none) Schistosoma mansoni genome sequen... 44 0.002
CP000875_819(CP000875|pid:none) Herpetosiphon aurantiacus ATCC 2... 43 0.003
CR382134_367(CR382134|pid:none) Debaryomyces hansenii strain CBS... 43 0.003
CP000885_2356(CP000885|pid:none) Clostridium phytofermentans ISD... 43 0.003
CP000407_1623(CP000407|pid:none) Streptococcus suis 05ZYH33, com... 43 0.004
(Q8E5Y5) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 43 0.004
FM992690_392(FM992690|pid:none) Candida dubliniensis CD36 chromo... 43 0.004
(A8AWT2) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 42 0.005
CP000387_916(CP000387|pid:none) Streptococcus sanguinis SK36, co... 42 0.005
(P27515) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 42 0.005
(Q03K46) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 42 0.007
AM946015_1191(AM946015|pid:none) Streptococcus uberis 0140J comp... 42 0.007
CP001615_2707(CP001615|pid:none) Exiguobacterium sp. AT1b, compl... 42 0.007
(Q8DTG1) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 42 0.009
AP008955_1908(AP008955|pid:none) Brevibacillus brevis NBRC 10059... 42 0.009
CP000817_3693(CP000817|pid:none) Lysinibacillus sphaericus C3-41... 42 0.009
(B4U220) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 42 0.009
CP000853_1625(CP000853|pid:none) Alkaliphilus oremlandii OhILAs,... 42 0.009
AE017347_223(AE017347|pid:none) Cryptococcus neoformans var. neo... 42 0.009
(Q0SS52) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 41 0.015
(A2RDZ9) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 41 0.015
AP008971_1450(AP008971|pid:none) Finegoldia magna ATCC 29328 DNA... 41 0.015
(Q8P0F8) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 41 0.015
FM954972_919(FM954972|pid:none) Vibrio splendidus LGP32 chromoso... 41 0.015
CP001022_2031(CP001022|pid:none) Exiguobacterium sibiricum 255-1... 41 0.015
(A7GT59) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 41 0.015
(A5ITD6) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 41 0.015
CP000003_1090(CP000003|pid:none) Streptococcus pyogenes MGAS1039... 41 0.015
CP000771_445(CP000771|pid:none) Fervidobacterium nodosum Rt17-B1... 40 0.025
CP000413_517(CP000413|pid:none) Lactobacillus gasseri ATCC 33323... 40 0.025
T21110(T21110) hypothetical protein F19B6.1b - Caenorhabditis el... 40 0.033
(A9VI01) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 40 0.033
(A8FFL8) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 40 0.033
(O32033) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 40 0.033
(A0RIZ3) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 40 0.033
(Q92BL6) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 40 0.033
(B7HQD8) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 40 0.033
(Q71ZH3) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 40 0.033
(A7Z727) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 40 0.033
(Q65GT3) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 40 0.033
(B7HE15) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 40 0.033
(Q8Y727) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 40 0.033
(Q896E3) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 40 0.033
CU928176_384(CU928176|pid:none) Zygosaccharomyces rouxii strain ... 40 0.033
(Q4L6V8) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 40 0.033
(A8YU29) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 39 0.043
(B7GIU0) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 39 0.043
CP000033_548(CP000033|pid:none) Lactobacillus acidophilus NCFM, ... 39 0.043
AP009484_1252(AP009484|pid:none) Macrococcus caseolyticus JCSC54... 39 0.056
CP001185_1479(CP001185|pid:none) Thermosipho africanus TCF52B, c... 39 0.056
CP000724_2383(CP000724|pid:none) Alkaliphilus metalliredigens QY... 39 0.056
CP000416_963(CP000416|pid:none) Lactobacillus brevis ATCC 367, c... 39 0.056
(Q49Y49) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 39 0.073
AX887171_1(AX887171|pid:none) Sequence 3034 from Patent EP1033401. 39 0.073
AE003852_1019(AE003852|pid:none) Vibrio cholerae O1 biovar eltor... 39 0.073
BA000037_1261(BA000037|pid:none) Vibrio vulnificus YJ016 DNA, ch... 39 0.073
(Q9KT67) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 39 0.073
AF298155_1(AF298155|pid:none) Cryptosporidium parvum uridine kin... 39 0.073
(Q7MM12) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 39 0.073
(Q87N09) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 39 0.073
CR378666_228(CR378666|pid:none) Photobacterium profundum SS9; se... 39 0.073
(A7MVE7) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 39 0.073
(Q7VL27) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 39 0.073
(Q9HQC9) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 38 0.096
(Q81LK8) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 38 0.096
(Q88WR0) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 38 0.096
CP001581_2687(CP001581|pid:none) Clostridium botulinum A2 str. K... 38 0.096
(Q8EPT5) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 38 0.096
AE016817_688(AE016817|pid:none) Ashbya gossypii (= Eremothecium ... 38 0.096
CP000412_402(CP000412|pid:none) Lactobacillus delbrueckii subsp.... 38 0.12
(A5VKU8) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 37 0.16
DQ489736_460(DQ489736|pid:none) Leuconostoc citreum KM20, comple... 37 0.16
(A9WCC8) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 37 0.16
AE015924_1524(AE015924|pid:none) Porphyromonas gingivalis W83, c... 37 0.21
CP000411_936(CP000411|pid:none) Oenococcus oeni PSU-1, complete ... 37 0.21
(B1KXA7) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 37 0.28
(Q5SKR5) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 37 0.28
CP001083_2672(CP001083|pid:none) Clostridium botulinum Ba4 str. ... 37 0.28
CU928165_244(CU928165|pid:none) Kluyveromyces thermotolerans str... 36 0.36
CP000716_1330(CP000716|pid:none) Thermosipho melanesiensis BI429... 36 0.36
(Q2NUC7) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 36 0.47
A64973(A64973;I55002;S32738) uridine kinase (EC 2.7.1.48) - Esch... 36 0.47
(A1JTX4) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 36 0.47
(B4SXV3) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 36 0.47
(Q6D7B4) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 36 0.47
(A8GC40) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 36 0.47
AP008937_1287(AP008937|pid:none) Lactobacillus fermentum IFO 395... 36 0.47
(P0A8F4) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 36 0.47
(A9N7M0) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 36 0.47
(B7LV30) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 36 0.47
(A7MHG8) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 36 0.47
AE014075_2524(AE014075|pid:none) Escherichia coli CFT073, comple... 36 0.47
CP000159_512(CP000159|pid:none) Salinibacter ruber DSM 13855, co... 36 0.47
CP000036_825(CP000036|pid:none) Shigella boydii Sb227, complete ... 36 0.47
(B5RBW3) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 36 0.47
AE009952_2603(AE009952|pid:none) Yersinia pestis KIM, complete g... 36 0.47
AB198423_2(AB198423|pid:none) Klebsiella pneumoniae DNA, cps loc... 36 0.47
(B8CPI6) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 35 0.62
(A0KW26) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 35 0.62
(A5UFT8) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 35 0.62
(Q081H5) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 35 0.62
CP000821_2645(CP000821|pid:none) Shewanella sediminis HAW-EB3, c... 35 0.62
CP000746_859(CP000746|pid:none) Actinobacillus succinogenes 130Z... 35 0.62
(Q12MJ0) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 35 0.62
(A1RIY2) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 35 0.62
(A1S796) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 35 0.62
(B0TJ03) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 35 0.62
(A1SUY9) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 35 0.62
(A6WP54) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 35 0.62
CP000961_1962(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 35 0.62
(B0UT65) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 35 0.81
CP000687_794(CP000687|pid:none) Actinobacillus pleuropneumoniae ... 35 0.81
AE016828_759(AE016828|pid:none) Coxiella burnetii RSA 493, compl... 35 0.81
CP001078_922(CP001078|pid:none) Clostridium botulinum E3 str. Al... 35 0.81
CP000155_96(CP000155|pid:none) Hahella chejuensis KCTC 2396, com... 35 0.81
AP006841_3191(AP006841|pid:none) Bacteroides fragilis YCH46 DNA,... 35 0.81
CP001056_990(CP001056|pid:none) Clostridium botulinum B str. Ekl... 35 0.81
(Q65S71) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 35 1.1
FP236842_1381(FP236842|pid:none) Erwinia pyrifoliae strain Ep1/9... 35 1.1
CP000359_200(CP000359|pid:none) Deinococcus geothermalis DSM 113... 35 1.1
CP001365_1538(CP001365|pid:none) Halorubrum lacusprofundi ATCC 4... 35 1.1
(Q9CM85) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 34 1.4
(A8H3V4) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 34 1.8
(Q9RXZ5) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 33 3.1
CP000412_403(CP000412|pid:none) Lactobacillus delbrueckii subsp.... 33 3.1
CP000675_1943(CP000675|pid:none) Legionella pneumophila str. Cor... 33 3.1
AE017354_1824(AE017354|pid:none) Legionella pneumophila subsp. p... 33 3.1
AE017340_1530(AE017340|pid:none) Idiomarina loihiensis L2TR, com... 33 3.1
CR954253_501(CR954253|pid:none) Lactobacillus delbrueckii subsp.... 33 3.1
(O74427) RecName: Full=Uridine kinase; EC=2.7.1.48; Alt... 33 3.1
CP000915_1100(CP000915|pid:none) Francisella tularensis subsp. m... 33 4.0
AJ749949_702(AJ749949|pid:none) Francisella tularensis subsp. tu... 33 4.0
CP001098_1284(CP001098|pid:none) Halothermothrix orenii H 168, c... 33 4.0
AY967251_1(AY967251|pid:none) Synthetic construct isolate FTT070... 33 4.0
CP000937_222(CP000937|pid:none) Francisella philomiragia subsp. ... 33 4.0
EU730893_4(EU730893|pid:none) Helicoverpa armigera multiple nucl... 32 5.2
AM398681_1087(AM398681|pid:none) Flavobacterium psychrophilum JI... 32 5.2
FM992688_527(FM992688|pid:none) Candida dubliniensis CD36 chromo... 32 8.9
>DQ213955_1(DQ213955|pid:none) Taeniopygia guttata clone
0061P0025C08 putative uridine-cytidine kinase 2 variant
2 mRNA, complete cds.
Length = 261
Score = 60.5 bits (145), Expect = 2e-08
Identities = 32/46 (69%), Positives = 36/46 (78%)
Frame = +1
Query: 1 LPTKKHADVIIPRGADNVVAIDLIVQHISSKLSEKESFRKSQGQLN 138
LPTKK+ADVIIPRGADN VAI+LIVQHI L+ S R+S G LN
Sbjct: 198 LPTKKYADVIIPRGADNEVAINLIVQHIQDILNGGLSKRQSNGYLN 243
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 250,414,293
Number of extensions: 2709682
Number of successful extensions: 18950
Number of sequences better than 10.0: 196
Number of HSP's gapped: 18945
Number of HSP's successfully gapped: 196
Length of query: 123
Length of database: 1,040,966,779
Length adjustment: 89
Effective length of query: 34
Effective length of database: 755,785,414
Effective search space: 25696704076
Effective search space used: 25696704076
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 29 (15.8 bits)
|
| PSORT |
|
| VS (DIR, S) |
0 |
| VH (FL, L) |
0 |
| VF (FL, S) |
0 |
| AH (FL, L) |
0 |
| AF (FL, S) |
0 |
| SL (DIR, L) |
0 |
| SS (DIR, S) |
1 |
| SH (FL, L) |
0 |
| SF (FL, S) |
0 |
| CH (FL, L) |
0 |
| CF (FL, S) |
0 |
| FCL (DIR, L) |
0 |
| FC (DIR, S) |
0 |
| FC-IC (SUB) |
0 |