Contig-U05714-1
Contig ID Contig-U05714-1
Contig update 2001. 8.30
Contig sequence
>Contig-U05714-1 (Contig-U05714-1Q) /CSM_Contig/Contig-U05714-1Q.Seq.d
GAAATTGTTCAAATGTTTTATTATCAACTGACACATTATTCATCTGTGAA
TTAAGTAAATCATACCATACTTTATCATCACCAAAAACCACCAATACAAC
AATGCTATCATTTATAAATAATTCACCAAATTCAACAGTTTCAAATGAAA
TAATTGAAATGATTTCAGGATATTTCCAAATTAAAATTTCAACAAAACCA
TCAACAACTGATGATGATAATAATAAAAATAATGATGATGGGGATAGTGA
AATTGATAGTGTTGGGAAATCTGCAGTAGATTCTTCAAAATCTAATAATA
ATAGTGGTGGTGGTGGTAATNGNGAATTATATTTATTAATAATATTACCA
ACTGTATTATTCATTATTGTAGCAGCATTAGTTGCAATTTTCATAAAGAC
AAGAGTATCCCAAAATAGTGGTTCAAAAGTAAACAAAAATAATAATAAAA
AGGATAGTATTAATGTACCATTCCAAATGTTGGATGAAATCACCACATAG
CAATTAGATAACCACCAAAATTGGATACCATTTAATGATTTAATTATTGG
TGGTACAACAAATATTTAAAATAATAATAATAATAATAATTATAATAACA
ATAATAATAAAAATAAATTTAATTATACACTTTAAAAAATTTTAAAAAAA
AAAAAAAAAAA

Gap no gap
Contig length 661
Chromosome number (1..6, M) 1
Chromosome length 4919822
Start point 1601681
End point 1601020
Strand (PLUS/MINUS) MINUS
Number of clones 1
Number of EST 1
Link to clone list U05714
List of clone(s)

est1=SSK807Z,1,662
Translated Amino Acid sequence
NCSNVLLSTDTLFICELSKSYHTLSSPKTTNTTMLSFINNSPNSTVSNEIIEMISGYFQI
KISTKPSTTDDDNNKNNDDGDSEIDSVGKSAVDSSKSNNNSGGGGNXELYLLIILPTVLF
IIVAALVAIFIKTRVSQNSGSKVNKNNNKKDSINVPFQMLDEITT*qldnhqnwipfndl
iiggttni*nnnnnnnynnnnnknkfnytl*kilkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
eivqmfyyqlthyssvn*vnhtilyhhqkppiqqcyhl*iihqiqqfqmk*lk*fqdisk
lkfqqnhqqlmmiiikimmmgivklivlgnlq*ilqnliiivvvvvxxnyiy**yyqlyy
sll*qh*lqfs*rqeypkivvqk*tkiiikrivlmyhskcwmksphsn*ittkigyhlmi
*llvvqqifkiiiiiiiiitiiikinliihfkkf*kkkkk


Frame B:
klfkcfiin*hiihl*ik*iipyfiitknhqynnaiiyk*ftkfnsfk*nn*ndfrifpn
*nfnktinn******k***wg**n**cweicsrffki****wwww*xxiifinnitncii
hycssiscnfhkdksipk*wfkskqk***kg*y*ctipnvg*nhhiair*ppkldti**f
nywwynkylk******l**q***k*i*lytlknfkkkkkk


Frame C:
NCSNVLLSTDTLFICELSKSYHTLSSPKTTNTTMLSFINNSPNSTVSNEIIEMISGYFQI
KISTKPSTTDDDNNKNNDDGDSEIDSVGKSAVDSSKSNNNSGGGGNXELYLLIILPTVLF
IIVAALVAIFIKTRVSQNSGSKVNKNNNKKDSINVPFQMLDEITT*qldnhqnwipfndl
iiggttni*nnnnnnnynnnnnknkfnytl*kilkkkkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U05714-1 (Contig-U05714-1Q)
/CSM_Contig/Contig-U05714-1Q.Seq.d
(661 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U05714-1 (Contig-U05714-1Q) /CSM_Contig/Conti... 1098 0.0
Contig-U11251-1 (Contig-U11251-1Q) /CSM_Contig/Conti... 50 3e-06
Contig-U13865-1 (Contig-U13865-1Q) /CSM_Contig/Conti... 48 1e-05
Contig-U12458-1 (Contig-U12458-1Q) /CSM_Contig/Conti... 48 1e-05
Contig-U12138-1 (Contig-U12138-1Q) /CSM_Contig/Conti... 48 1e-05
Contig-U13348-1 (Contig-U13348-1Q) /CSM_Contig/Conti... 44 2e-04
Contig-U06500-1 (Contig-U06500-1Q) /CSM_Contig/Conti... 44 2e-04
Contig-U13845-1 (Contig-U13845-1Q) /CSM_Contig/Conti... 42 7e-04
Contig-U12912-1 (Contig-U12912-1Q) /CSM_Contig/Conti... 42 7e-04
Contig-U12394-1 (Contig-U12394-1Q) /CSM_Contig/Conti... 42 7e-04

>Contig-U05714-1 (Contig-U05714-1Q) /CSM_Contig/Contig-U05714-1Q.Seq.d
Length = 661

Score = 1098 bits (554), Expect = 0.0
Identities = 560/560 (100%)
Strand = Plus / Plus


Query: 1 gaaattgttcaaatgttttattatcaactgacacattattcatctgtgaattaagtaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaattgttcaaatgttttattatcaactgacacattattcatctgtgaattaagtaaat 60


Query: 61 cataccatactttatcatcaccaaaaaccaccaatacaacaatgctatcatttataaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cataccatactttatcatcaccaaaaaccaccaatacaacaatgctatcatttataaata 120


Query: 121 attcaccaaattcaacagtttcaaatgaaataattgaaatgatttcaggatatttccaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attcaccaaattcaacagtttcaaatgaaataattgaaatgatttcaggatatttccaaa 180


Query: 181 ttaaaatttcaacaaaaccatcaacaactgatgatgataataataaaaataatgatgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttaaaatttcaacaaaaccatcaacaactgatgatgataataataaaaataatgatgatg 240


Query: 241 gggatagtgaaattgatagtgttgggaaatctgcagtagattcttcaaaatctaataata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggatagtgaaattgatagtgttgggaaatctgcagtagattcttcaaaatctaataata 300


Query: 301 atagtggtggtggtggtaatngngaattatatttattaataatattaccaactgtattat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atagtggtggtggtggtaatngngaattatatttattaataatattaccaactgtattat 360


Query: 361 tcattattgtagcagcattagttgcaattttcataaagacaagagtatcccaaaatagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcattattgtagcagcattagttgcaattttcataaagacaagagtatcccaaaatagtg 420


Query: 421 gttcaaaagtaaacaaaaataataataaaaaggatagtattaatgtaccattccaaatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gttcaaaagtaaacaaaaataataataaaaaggatagtattaatgtaccattccaaatgt 480


Query: 481 tggatgaaatcaccacatagcaattagataaccaccaaaattggataccatttaatgatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tggatgaaatcaccacatagcaattagataaccaccaaaattggataccatttaatgatt 540


Query: 541 taattattggtggtacaaca 560
||||||||||||||||||||
Sbjct: 541 taattattggtggtacaaca 560


Score = 40.1 bits (20), Expect = 0.003
Identities = 20/20 (100%)
Strand = Plus / Plus


Query: 624 tatacactttaaaaaatttt 643
||||||||||||||||||||
Sbjct: 624 tatacactttaaaaaatttt 643


Score = 32.2 bits (16), Expect = 0.72
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 217 ataataataaaaataa 232
||||||||||||||||
Sbjct: 601 ataataataaaaataa 616


>Contig-U11251-1 (Contig-U11251-1Q) /CSM_Contig/Contig-U11251-1Q.Seq.d
Length = 2643

Score = 50.1 bits (25), Expect = 3e-06
Identities = 25/25 (100%)
Strand = Plus / Plus


Query: 293 taataataatagtggtggtggtggt 317
|||||||||||||||||||||||||
Sbjct: 340 taataataatagtggtggtggtggt 364


Score = 44.1 bits (22), Expect = 2e-04
Identities = 22/22 (100%)
Strand = Plus / Plus


Query: 293 taataataatagtggtggtggt 314
||||||||||||||||||||||
Sbjct: 310 taataataatagtggtggtggt 331


Score = 36.2 bits (18), Expect = 0.046
Identities = 24/26 (92%)
Strand = Plus / Plus


Query: 293 taataataatagtggtggtggtggta 318
||||||||||| | ||||||||||||
Sbjct: 307 taataataataatagtggtggtggta 332


Score = 34.2 bits (17), Expect = 0.18
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 293 taataataatagtggtggtggtggt 317
|||||||| | ||||||||||||||
Sbjct: 343 taataatagtggtggtggtggtggt 367


Score = 34.2 bits (17), Expect = 0.18
Identities = 23/25 (92%)
Strand = Plus / Plus


Query: 293 taataataatagtggtggtggtggt 317
||||||||||| | |||||||||||
Sbjct: 337 taataataataatagtggtggtggt 361


>Contig-U13865-1 (Contig-U13865-1Q) /CSM_Contig/Contig-U13865-1Q.Seq.d
Length = 1961

Score = 48.1 bits (24), Expect = 1e-05
Identities = 24/24 (100%)
Strand = Plus / Minus


Query: 217 ataataataaaaataatgatgatg 240
||||||||||||||||||||||||
Sbjct: 1848 ataataataaaaataatgatgatg 1825


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 44,401
Number of Sequences: 6905
Number of extensions: 44401
Number of successful extensions: 6912
Number of sequences better than 10.0: 1096
length of query: 661
length of database: 5,674,871
effective HSP length: 16
effective length of query: 645
effective length of database: 5,564,391
effective search space: 3589032195
effective search space used: 3589032195
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 8. 2
Homology vs DNA
Query= Contig-U05714-1 (Contig-U05714-1Q) /CSM_Contig/Contig-U05714-1Q.Seq.d
(661 letters)

Database: ddbj_B
105,743,758 sequences; 104,622,809,269 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(C94441) Dictyostelium discoideum slug cDNA, clone SSK807. 803 0.0 2
(L04286) Dictyostelium discoideum glycoprotein gp100 (P29F8;... 787 0.0 2
(FM992690) Candida dubliniensis CD36 chromosome 3, complete ... 50 2e-06 14
(AC117081) Dictyostelium discoideum chromosome 2 map 5862124... 52 1e-05 11
(AC117080) Dictyostelium discoideum chromosome 2 map complem... 50 2e-05 6
(AC116920) Dictyostelium discoideum chromosome 2 map 4415041... 36 1e-04 8
(EL505044) F01_1086_1.AB1 Blood stage Plasmodium falciparum ... 60 1e-04 1
(EL499405) PFLAB1-S_F3_-P5A_G06_14.AB1 Blood stage Plasmodiu... 60 1e-04 1
(AL844503) Plasmodium falciparum 3D7 chromosome 4. 48 2e-04 10
(AL844505) Plasmodium falciparum 3D7 chromosome 6. 54 3e-04 8
(AE014186) Plasmodium falciparum 3D7 chromosome 11, complete... 58 5e-04 1
(EG407283) SAAH-aac44d07.b1 Agen 0058 Schmidtea mediterranea... 54 0.001 2
(AC117072) Dictyostelium discoideum chromosome 2 map 3879572... 34 0.001 8
(BQ596494) PfESToab18e12.y1 Plasmodium falciparum 3D7 asexua... 46 0.001 2
(EG411161) SAAH-aaa77b08.b1 Agen 0058 Schmidtea mediterranea... 54 0.001 2
(EG417614) SAAH-aab63b11.b1 Agen 0058 Schmidtea mediterranea... 54 0.001 2
(EG417131) SAAH-aab57d05.b1 Agen 0058 Schmidtea mediterranea... 54 0.001 2
(EG411819) SAAH-aaa06d07.b1 Agen 0058 Schmidtea mediterranea... 54 0.001 2
(EG342717) SAAH-aab31a03.b1 Agen 0058 Schmidtea mediterranea... 54 0.001 2
(AC116984) Dictyostelium discoideum chromosome 2 map 2567470... 46 0.001 10
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 48 0.001 13
(AC116330) Dictyostelium discoideum chromosome 2 map 3191214... 40 0.001 10
(FC853333) CBHN7844.fwd CBHN Metridium senile tentacle Metri... 40 0.001 2
(AC180451) Strongylocentrotus purpuratus clone R3-3103B15, W... 44 0.001 2
(GR201856) CBPI5021.b1 CBPI Mimulus lewisii floral buds (L) ... 48 0.001 2
(CR974456) Zebrafish DNA sequence from clone CH73-253J10 in ... 40 0.001 2
(AC116305) Dictyostelium discoideum chromosome 2 map 1005175... 48 0.002 10
(CU104755) Zebrafish DNA sequence from clone CH73-95H12 in l... 56 0.002 1
(BX537259) Zebrafish DNA sequence from clone CH211-241P10 in... 56 0.002 1
(BX296532) Zebrafish DNA sequence from clone CH211-281C19 in... 56 0.002 1
(BX248115) Zebrafish DNA sequence from clone CH211-208K15 in... 56 0.002 1
(AC153838) Mus musculus 6 BAC RP23-82B24 (Roswell Park Cance... 56 0.002 1
(AC116120) Mus musculus chromosome 6, clone RP23-78P7, compl... 56 0.002 1
(BS000099) Pan troglodytes chromosome 22 clone:PTB-047E13, m... 56 0.002 1
(EF690551) Plasmodium falciparum DEAD-box helicase 10 gene, ... 56 0.002 1
(AL844506) Plasmodium falciparum 3D7 chromosome 7. 56 0.002 1
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173... 56 0.002 1
(AP001692) Homo sapiens genomic DNA, chromosome 21q, section... 56 0.002 1
(AP000231) Homo sapiens genomic DNA, chromosome 21q21.2, LL5... 56 0.002 1
(AP000146) Homo sapiens genomic DNA, chromosome 21q, clone:C... 56 0.002 1
(AC149954) Strongylocentrotus purpuratus clone R3-32B14, WOR... 56 0.002 1
(AC119581) Rattus norvegicus clone CH230-371D11, *** SEQUENC... 56 0.002 1
(AC095190) Rattus norvegicus clone CH230-9C10, *** SEQUENCIN... 56 0.002 1
(CU151894) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 56 0.002 1
(AC201351) Strongylocentrotus purpuratus clone R3-17A21, WOR... 56 0.002 1
(AC180559) Strongylocentrotus purpuratus clone R3-3016K20, W... 56 0.002 1
(AC180359) Strongylocentrotus purpuratus clone R3-3114F22, W... 56 0.002 1
(CZ764080) OC__Ba0118N05.r OC__Ba Oryza coarctata genomic cl... 56 0.002 1
(AG009324) Homo sapiens genomic DNA, 21q region, clone: T145XS. 56 0.002 1
(AG009287) Homo sapiens genomic DNA, 21q region, clone: T145XS. 56 0.002 1
(BU498609) PfESToab99d12.y1 Plasmodium falciparum 3D7 asexua... 56 0.002 1
(EY366317) CAXA10666.rev CAXA Helobdella robusta Subtracted ... 56 0.002 1
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 46 0.002 9
(AC114263) Dictyostelium discoideum chromosome 2 map 215673-... 34 0.002 8
(CT030141) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 0.003 4
(AC131079) Mus musculus chromosome 14, clone RP23-434L17, co... 42 0.003 4
(AC210382) Populus trichocarpa clone POP018-P22, complete se... 54 0.003 4
(AC101196) Mus musculus clone RP23-177G5, LOW-PASS SEQUENCE ... 50 0.003 3
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 44 0.003 11
(CU468733) Zebrafish DNA sequence from clone DKEY-116L11 in ... 42 0.004 4
(AC116982) Dictyostelium discoideum chromosome 2 map 3622643... 48 0.004 11
(BJ421605) Dictyostelium discoideum cDNA clone:ddv43a11, 5' ... 48 0.004 2
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 50 0.005 10
(FC850126) CBHN616.rev CBHN Metridium senile tentacle Metrid... 52 0.005 2
(BX640464) Zebrafish DNA sequence from clone DKEY-22M8 in li... 48 0.005 2
(BX936425) Zebrafish DNA sequence from clone CH211-39L24 in ... 42 0.005 2
(AC216417) Populus trichocarpa clone POP051-F19, complete se... 42 0.005 2
(CR762418) Zebrafish DNA sequence from clone RP71-15A9 in li... 48 0.005 2
(CR405685) Zebrafish DNA sequence from clone DKEY-164B12 in ... 40 0.005 5
(CU928153) Zebrafish DNA sequence from clone CH73-338A16. 38 0.005 2
(AC116551) Dictyostelium discoideum chromosome 2 map complem... 38 0.006 11
(FF287153) pgsP0017G06 Solea senegalensis Mix of cDNA librar... 40 0.006 2
(CU694454) Zebrafish DNA sequence from clone DKEYP-100F5 in ... 54 0.007 1
(CU651673) Zebrafish DNA sequence from clone CH1073-416M20 i... 54 0.007 1
(CU179663) Zebrafish DNA sequence from clone DKEY-197I9. 54 0.007 1
(CR762435) Zebrafish DNA sequence from clone CH211-238C15 in... 54 0.007 1
(BX936437) Zebrafish DNA sequence from clone DKEYP-96G2 in l... 54 0.007 1
(BX465849) Zebrafish DNA sequence from clone DKEY-263L8 in l... 54 0.007 1
(FM992694) Candida dubliniensis CD36 chromosome 7, complete ... 54 0.007 1
(AL844504) Plasmodium falciparum 3D7 chromosome 5. 54 0.007 1
(AE014188) Plasmodium falciparum 3D7 chromosome 12, complete... 54 0.007 1
(AE014187) Plasmodium falciparum 3D7 chromosome 14, complete... 54 0.007 1
(AE014185) Plasmodium falciparum 3D7 chromosome 10, complete... 54 0.007 1
(FP102071) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 54 0.007 1
(BX942830) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 54 0.007 1
(AC184316) Strongylocentrotus purpuratus clone R3-4005D7, WO... 54 0.007 1
(AC179587) Strongylocentrotus purpuratus clone R3-1029I3, WO... 54 0.007 1
(AC178056) Strongylocentrotus purpuratus clone R3-3056F09, W... 54 0.007 1
(AC005506) Plasmodium falciparum chromosome 12 clone PFYAC35... 54 0.007 1
(EG413809) SAAH-aab14f07.b1 Agen 0058 Schmidtea mediterranea... 54 0.007 1
(EG407735) SAAH-aac49g06.b1 Agen 0058 Schmidtea mediterranea... 54 0.007 1
(EB241083) PEG003-C-217540-501 Normalized Pedal-Pleural Gang... 54 0.007 1
(BB234323) Mus musculus 3 days neonate thymus cDNA, RIKEN fu... 54 0.007 1
(GD237605) G1045P3113RD3.T1 Aplysia californica Pooled Norma... 54 0.007 1
(GD218240) G1045P3110RH6.T1 Aplysia californica Pooled Norma... 54 0.007 1
(BX230930) Danio rerio genomic clone DKEY-274B22, genomic su... 40 0.007 2
(AC177708) Strongylocentrotus purpuratus clone R3-1011H16, W... 50 0.010 4
(U60086) Dictyostelium discoideum multidrug resistance trans... 34 0.011 5
(AC212224) Zea mays chromosome 2 clone CH201-304O15; ZMMBBc0... 40 0.011 5
(DW404720) ES-N-S01-0122-W Penaeus monodon Eyestalk cDNA lib... 44 0.013 3
(AY159038) Dictyostelium discoideum LvsB (lvsB) gene, comple... 48 0.015 4
(CU683892) Zebrafish DNA sequence from clone ZFOS-335G10 in ... 46 0.015 4
(AA550644) 1833m3 gmbPfHB3.1, G. Roman Reddy Plasmodium falc... 42 0.016 2
(FP015785) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.016 5
(AC115682) Dictyostelium discoideum chromosome 2 map 4101105... 44 0.017 5
(AE001362) Plasmodium falciparum 3D7 chromosome 2, complete ... 52 0.018 10
(BX005453) Zebrafish DNA sequence from clone CH211-160E19 in... 40 0.018 2
(BX890570) Zebrafish DNA sequence from clone DKEYP-7F1 in li... 44 0.019 2
(AC174088) Strongylocentrotus purpuratus clone R3-17C5, WORK... 42 0.019 2
(AC178770) Strongylocentrotus purpuratus clone R3-3001O05, W... 42 0.019 2
(AL732499) Zebrafish DNA sequence from clone RP71-1C3 in lin... 40 0.019 2
(CU693374) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.019 2
(BX649391) Zebrafish DNA sequence from clone DKEY-1K23 in li... 48 0.019 2
(AC176789) Strongylocentrotus purpuratus clone R3-3106J1, WO... 42 0.019 2
(CR936399) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.019 2
(AC184405) Strongylocentrotus purpuratus clone R3-3106A16, W... 36 0.019 2
(CR847984) Zebrafish DNA sequence from clone DKEY-61O18 in l... 46 0.019 2
(AC176415) Strongylocentrotus purpuratus clone R3-12I22, WOR... 42 0.020 2
(AC153745) Ornithorhynchus anatinus clone OA_Bb-450E7, WORKI... 42 0.021 4
(FE153059) LV_LO_RA012B07f Litopenaeus vannamei lymphoid org... 36 0.022 3
(AF079445) Dictyostelium discoideum TipC (tipC) gene, comple... 40 0.022 3
(BX987959) Reverse strand read from insert in 5'HPRT inserti... 42 0.023 2
(AI779338) EST260217 tomato susceptible, Cornell Solanum lyc... 42 0.023 2
(AI779339) EST260218 tomato susceptible, Cornell Solanum lyc... 42 0.023 2
(AI772130) EST253230 tomato resistant, Cornell Solanum lycop... 42 0.024 2
(AU262283) Dictyostelium discoideum vegetative cDNA clone:VS... 42 0.024 2
(BI670763) PfESToaa04a02.y1 Plasmodium falciparum 3D7 asexua... 38 0.024 2
(AY160103) Dictyostelium discoideum nucleotide exchange fact... 50 0.025 2
(AC116919) Dictyostelium discoideum chromosome 2 map complem... 40 0.027 6
(AC115459) Rattus norvegicus clone CH230-55M11, *** SEQUENCI... 42 0.027 2
(AC115604) Dictyostelium discoideum chromosome 2 map 4354771... 48 0.028 7
(CR854915) Zebrafish DNA sequence from clone DKEY-4G13 in li... 52 0.028 1
(BX511077) Zebrafish DNA sequence from clone CH211-241J12 in... 52 0.028 1
(AP006498) Cyanidioschyzon merolae DNA, chromosome 16, compl... 52 0.028 1
(AM459458) Vitis vinifera contig VV78X262612.12, whole genom... 52 0.028 1
(AM454311) Vitis vinifera contig VV78X046057.9, whole genome... 52 0.028 1
(M73770) P.falciparum RNA polymerase III largest subunit gen... 52 0.028 1
(FM162566) Trypanosoma brucei Lister 427 surface glycoprotei... 52 0.028 1
(AL844509) Plasmodium falciparum 3D7 chromosome 13. 52 0.028 1
(AC117076) Dictyostelium discoideum chromosome 2 map 3323568... 52 0.028 1
(AC092806) Homo sapiens chromosome 1 clone RP11-156F12, comp... 52 0.028 1
(AC092782) Homo sapiens chromosome 1 clone RP11-411G13, comp... 52 0.028 1
(AC147940) Ornithorhynchus anatinus clone OA_Bb-420K11, WORK... 52 0.028 1
(AC147757) Ornithorhynchus anatinus clone OA_Bb-130O17, WORK... 52 0.028 1
(AC124167) Tetraodon nigroviridis clone GSTNB-42J2, WORKING ... 52 0.028 1
(FP102860) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.028 1
(FP102167) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 52 0.028 1
(AL049185) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 52 0.028 1
(AC184457) Strongylocentrotus purpuratus clone R3-25A8, WORK... 52 0.028 1
(AC181167) Strongylocentrotus purpuratus clone R3-15N15, WOR... 52 0.028 1
(AC181148) Strongylocentrotus purpuratus clone R3-3037N05, W... 52 0.028 1
(AC181139) Strongylocentrotus purpuratus clone R3-3037H03, W... 52 0.028 1
(AC179364) Strongylocentrotus purpuratus clone R3-1102B4, WO... 52 0.028 1
(AC177398) Strongylocentrotus purpuratus clone R3-1031H15, W... 52 0.028 1
(AC176233) Strongylocentrotus purpuratus clone R3-3005E14, W... 52 0.028 1
(BH180237) 016_B_07-21 SmBAC1 Schistosoma mansoni genomic cl... 52 0.028 1
(AL617189) T7 end of clone 016CA04 of library SmBAC1 from st... 52 0.028 1
(AL204919) Tetraodon nigroviridis genome survey sequence PUC... 52 0.028 1
(EL505121) F04_1951_302.AB1 Blood stage Plasmodium falciparu... 52 0.028 1
(EL501074) 056_PFLAB1-S-PLATE6B.AB1 Blood stage Plasmodium f... 52 0.028 1
(EL497000) H05_PFBAMHI-M-T7-PLATE11A.AB1 Blood stage Plasmod... 52 0.028 1
(DY894518) CeleSEQ14105 Cunninghamella elegans pBluescript (... 52 0.028 1
(EY331432) CAWY417.rev CAWY Helobdella robusta Subtracted Ea... 52 0.028 1
(FE124053) LV_HC_RA077J12f Litopenaeus vannamei hemocyte cDN... 48 0.030 2
(AC176512) Strongylocentrotus purpuratus clone R3-3072P9, WO... 36 0.032 6
(AC115605) Dictyostelium discoideum chromosome 2 map 5817431... 34 0.034 4
(BJ390525) Dictyostelium discoideum cDNA clone:dds22a24, 5' ... 42 0.038 2
(AC115684) Dictyostelium discoideum chromosome 2 map 3108975... 38 0.040 7
(CR342084) mte1-74N17RM1 BAC end, cultivar Jemalong A17 of M... 48 0.053 2
(AC178121) Strongylocentrotus purpuratus clone R3-3074K07, W... 44 0.053 3
(BX204903) Danio rerio genomic clone DKEY-216C2, genomic sur... 44 0.056 2
(DQ149676) Halterapis minuta cytochrome oxidase subunit I (C... 42 0.059 3
(CU499351) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.059 5
(AL844508) Plasmodium falciparum 3D7 chromosome 9. 46 0.061 2
(EY390039) CAXA852.rev CAXA Helobdella robusta Subtracted La... 48 0.063 2
(GR199967) CBPI3802.b1 CBPI Mimulus lewisii floral buds (L) ... 48 0.063 2
(CP001357) Brachyspira hyodysenteriae WA1, complete genome. 34 0.067 13
(AC009716) Homo sapiens chromosome 18, clone RP11-504I13, co... 36 0.068 2
(AC181550) Strongylocentrotus purpuratus clone R3-7F22, WORK... 44 0.068 2
(AC006281) Plasmodium falciparum chromosome 12 clone PFYACB8... 46 0.068 2
(AC181930) Strongylocentrotus purpuratus clone R3-1009J01, W... 36 0.068 2
(CU856075) H.melpomene DNA sequence from clone AEHM-6B18. 46 0.068 3
(AP001445) Homo sapiens genomic DNA, chromosome 18q23 clone:... 36 0.068 2
(CR376776) Zebrafish DNA sequence from clone CH211-13I23. 36 0.069 2
(AC177792) Strongylocentrotus purpuratus clone R3-1002C21, W... 36 0.069 2
(CU929196) Zebrafish DNA sequence from clone CH73-55I23 in l... 48 0.070 2
(BX001026) Zebrafish DNA sequence from clone CH211-13B16 in ... 36 0.071 2
(CR392011) Zebrafish DNA sequence from clone DKEY-272L17 in ... 36 0.071 2
(CU571063) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 48 0.071 2
(EL416144) CHCL4764.b1_H15.ab1 CHC(LMS) Texas blueweed Helia... 38 0.072 2
(FP245464) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.073 2
(CU914144) Zebrafish DNA sequence from clone ZFOS-1056B4 in ... 40 0.073 2
(FI261462) CccaBb040-C12JF CccABb Cajanus cajan genomic clon... 42 0.075 2
(AC116924) Dictyostelium discoideum chromosome 2 map 6357117... 40 0.075 6
(AC183859) Ornithorhynchus anatinus clone OA_Bb-110P22, WORK... 40 0.076 3
(DU083638) 279924 Tomato HindIII BAC Library Solanum lycoper... 48 0.077 2
(EY336672) CAWY784.rev CAWY Helobdella robusta Subtracted Ea... 34 0.077 3
(AC116960) Dictyostelium discoideum chromosome 2 map complem... 36 0.078 12
(AC117073) Dictyostelium discoideum chromosome 2 map 6045872... 36 0.084 5
(FE115853) LV_HC_RA063D09r Litopenaeus vannamei hemocyte cDN... 38 0.087 2
(FE115854) LV_HC_RA063H09f Litopenaeus vannamei hemocyte cDN... 38 0.087 2
(FE056519) LV_ES_RA24P22r Litopenaeus vannamei eyestalk cDNA... 38 0.087 2
(BP904343) Solanum lycopersicum cDNA, clone: LB11BC12, 5' en... 40 0.089 2
(FM992689) Candida dubliniensis CD36 chromosome 2, complete ... 44 0.092 15
(AC176172) Strongylocentrotus purpuratus clone R3-3066I12, W... 42 0.093 5
(CT573230) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 0.10 7
(AL844502) Plasmodium falciparum 3D7 chromosome 3. 50 0.11 10
(CE588527) tigr-gss-dog-17000366366531 Dog Library Canis lup... 42 0.11 2
(AL049183) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 36 0.11 8
(CU928014) Zebrafish DNA sequence from clone CH73-67K9 in li... 50 0.11 1
(CU468924) Zebrafish DNA sequence from clone DKEY-201I24 in ... 50 0.11 1
(CR788305) Zebrafish DNA sequence from clone DKEYP-59G5 in l... 50 0.11 1
(CR450730) Zebrafish DNA sequence from clone DKEY-43P5 in li... 50 0.11 1
(CR388125) Zebrafish DNA sequence from clone DKEY-102G19 in ... 50 0.11 1
(BX927241) Zebrafish DNA sequence from clone DKEY-184P18 in ... 50 0.11 1
(BX901917) Zebrafish DNA sequence from clone DKEY-32E10 in l... 50 0.11 1
(BX663528) Zebrafish DNA sequence from clone DKEYP-47F9 in l... 50 0.11 1
(BX571724) Zebrafish DNA sequence from clone CH211-165B19 in... 50 0.11 1
(BX511192) Zebrafish DNA sequence from clone DKEYP-89C11 in ... 50 0.11 1
(BX470068) Zebrafish DNA sequence from clone CH211-219C8 in ... 50 0.11 1
(BX323060) Zebrafish DNA sequence from clone DKEY-27K4 in li... 50 0.11 1
(BC124652) Danio rerio si:dkey-184p18.2, mRNA (cDNA clone MG... 50 0.11 1
(AL954694) Zebrafish DNA sequence from clone CH211-219F7 in ... 50 0.11 1
(BV371871) S231P666RA6.T0 BedlingtonTerrier Canis familiaris... 50 0.11 1
(AC115040) Mus musculus chromosome 7, clone RP24-281E19, com... 50 0.11 1
(AC111086) Mus musculus chromosome 7, clone RP23-152P5, comp... 50 0.11 1
(AC107703) Mus musculus, clone RP23-472H1, complete sequence. 50 0.11 1
(AB048900) Macaca fascicularis brain cDNA, clone:QnpA-17416. 50 0.11 1
(AY023386) Oryza sativa microsatellite MRG5711 containing (T... 50 0.11 1
(AP008207) Oryza sativa (japonica cultivar-group) genomic DN... 50 0.11 1
(AP003854) Oryza sativa Japonica Group genomic DNA, chromoso... 50 0.11 1
(AC210652) Populus trichocarpa clone POP053-J11, complete se... 50 0.11 1
(EA681118) Sequence 59997 from patent US 7365185. 50 0.11 1
(DI028761) Oligonucleotides for inhibiting the expression of... 50 0.11 1
(DD224279) A method of diagnosing Type II Diabetes. 50 0.11 1
(CQ523516) Sequence 55383 from Patent WO0160860. 50 0.11 1
(AX080248) Sequence 21 from Patent WO0107602. 50 0.11 1
(AR242614) Sequence 21 from patent US 6472521. 50 0.11 1
(FM162572) Trypanosoma brucei Lister 427 surface glycoprotei... 50 0.11 1
(AY232269) Dictyostelium discoideum putative protein Roco7 (... 50 0.11 1
(AL844507) Plasmodium falciparum 3D7 chromosome 8. 50 0.11 1
(AF362369) Dictyostelium discoideum histidine kinase DhkG (d... 50 0.11 1
(AF092946) Metapenaeus ensis nuclear hormone receptor E75 (E... 50 0.11 1
(AL451044) Human DNA sequence from clone RP11-293K19 on chro... 50 0.11 1
(AL354834) Human DNA sequence from clone RP11-109J9 on chrom... 50 0.11 1
(AC011402) Homo sapiens chromosome 5 clone CTB-38B5, complet... 50 0.11 1
(AC011370) Homo sapiens chromosome 5 clone CTB-107A22, compl... 50 0.11 1
(AC157976) Strongylocentrotus purpuratus clone R3-4002B10, W... 50 0.11 1
(AC156352) Ornithorhynchus anatinus clone OA_Bb-306O1, WORKI... 50 0.11 1
(AC128550) Rattus norvegicus clone CH230-137O6, *** SEQUENCI... 50 0.11 1
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 50 0.11 1
(AC120198) Danio rerio strain Tue clone CH211-125B19, WORKIN... 50 0.11 1
(AC119638) Rattus norvegicus clone CH230-247O17, WORKING DRA... 50 0.11 1
(AC114937) Homo sapiens chromosome 5 clone CTD-2186C8, WORKI... 50 0.11 1
(AC111428) Rattus norvegicus clone CH230-246F11, WORKING DRA... 50 0.11 1
(AC095411) Rattus norvegicus clone CH230-6P9, *** SEQUENCING... 50 0.11 1
(AC094595) Rattus norvegicus clone CH230-4B19, WORKING DRAFT... 50 0.11 1
(FP102697) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.11 1
(FP102309) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.11 1
(FP102073) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.11 1
(FP074868) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.11 1
(CU929521) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.11 1
(CU929512) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.11 1
(CU929496) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.11 1
(CU694533) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.11 1
(CU571389) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.11 1
(CU464065) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.11 1
(CU062512) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.11 1
(CT027797) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.11 1
(CT009686) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.11 1
(BX510958) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 50 0.11 1
(AL391257) Human DNA sequence *** SEQUENCING CANCELLED *** f... 50 0.11 1
(AC185162) Ornithorhynchus anatinus clone OA_Bb-243C4, WORKI... 50 0.11 1
(AC184439) Strongylocentrotus purpuratus clone R3-3094H17, W... 50 0.11 1
(AC180502) Strongylocentrotus purpuratus clone R3-3099J16, W... 50 0.11 1
(AC178978) Strongylocentrotus purpuratus clone R3-3122C5, WO... 50 0.11 1
(AC177599) Strongylocentrotus purpuratus clone R3-1023O6, WO... 50 0.11 1
(AC176991) Strongylocentrotus purpuratus clone R3-36P4, WORK... 50 0.11 1
(AC176823) Strongylocentrotus purpuratus clone R3-3111H09, W... 50 0.11 1
(AC176726) Strongylocentrotus purpuratus clone R3-3096J18, W... 50 0.11 1
(AC168546) Strongylocentrotus purpuratus clone R3-3091K20, W... 50 0.11 1
(AC168417) Strongylocentrotus purpuratus clone R3-4002B10, W... 50 0.11 1
(AC005140) Plasmodium falciparum chromosome 12 clone PFYACB8... 50 0.11 1
(AZ521036) RPCI-11-172N17.TV RPCI-11 Homo sapiens genomic cl... 50 0.11 1
(AQ525587) HS_5227_B2_F10_T7A RPCI-11 Human Male BAC Library... 50 0.11 1
(AL981781) Danio rerio genomic clone DKEY-38N5, genomic surv... 50 0.11 1
(DE851033) Macropus eugenii DNA, BAC clone: MEB1-014D09_F, 5... 50 0.11 1
(CC437344) PUHMY31TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 50 0.11 1
(BX242650) Danio rerio genomic clone DKEY-246B7, genomic sur... 50 0.11 1
(EB862119) 6724580 ZF03 Danio rerio cDNA clone 2587154, mRNA... 50 0.11 1
(DR923544) EST1115083 Aquilegia cDNA library Aquilegia formo... 50 0.11 1
(CX580046) TTE00032661 Amplicon Express - Conjugative Form T... 50 0.11 1
(CT645769) Danio rerio EST, clone ZF_mu_125a18 5'. 50 0.11 1
(CT645768) Danio rerio EST, clone ZF_mu_125a18 5'. 50 0.11 1
(CN807521) HDAH05E03.F Leech Haementeria depressa library HD... 50 0.11 1
(BU497188) PfESToab56a10.y1 Plasmodium falciparum 3D7 asexua... 50 0.11 1
(BJ391778) Dictyostelium discoideum cDNA clone:dds25m03, 5' ... 50 0.11 1
(GE887190) 1112934356551 BABEVCEREB-C-01-1-7KB Papio anubis ... 50 0.11 1
(GE873211) 1112870145075 BABEVCEREB-C-01-1-7KB Papio anubis ... 50 0.11 1
(FF575078) TTEF918THB Tetrahymena thermophila conjugation cD... 50 0.11 1
(EL507040) C03_PF-SAU3A-T7-M-P3.AB1 Blood stage Plasmodium f... 46 0.11 2
(AC156349) Ornithorhynchus anatinus clone OA_Bb-105B11, WORK... 40 0.12 3
(DX397203) GE__Sa0092E01.b1 Gossypium exiguum WGS library Go... 42 0.12 2
(AC034154) Homo sapiens BAC clone RP11-242D9 from 4, complet... 48 0.12 4
(AC127288) Mus musculus BAC clone RP23-358J11 from 8, comple... 48 0.12 4
(AC181899) Strongylocentrotus purpuratus clone R3-1015I01, W... 38 0.13 4
(AC180787) Strongylocentrotus purpuratus clone R3-3072A21, W... 40 0.13 5
(AC103932) Mus musculus clone RP23-235P5, WORKING DRAFT SEQU... 42 0.13 4
(AC176335) Strongylocentrotus purpuratus clone R3-3053M1, WO... 44 0.14 5
(BX465184) Zebrafish DNA sequence from clone DKEY-20N10 in l... 42 0.15 6
(CU179658) Zebrafish DNA sequence from clone CH211-251I10. 48 0.15 5
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423... 38 0.15 8
(BX908795) Zebrafish DNA sequence from clone DKEY-92J12 in l... 48 0.16 6
(U66913) Dictyostelium discoideum ORF DG1040 gene, partial cds. 36 0.17 3
(BX957324) Zebrafish DNA sequence from clone DKEY-280F7 in l... 42 0.17 5
(CU984576) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.17 2
(DY542504) HPO-N-S01-0394-LF Hematopoietic cDNA library Pena... 46 0.18 2
(AC200002) Ornithorhynchus anatinus clone OA_Bb-203A16, WORK... 40 0.18 3
(CR847992) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 42 0.18 5
(DY888896) CeleSEQ6301 Cunninghamella elegans pBluescript (E... 42 0.18 2
(AC115129) Rattus norvegicus clone CH230-50F24, WORKING DRAF... 40 0.18 4
(FP326740) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.19 2
(BX465191) Zebrafish DNA sequence from clone DKEY-9G4 in lin... 38 0.19 7
(BX248416) Zebrafish DNA sequence from clone DKEY-75L1 in li... 42 0.19 4
(CU856115) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 44 0.19 2
(DW266274) UI-S-GN1-abv-f-04-0-UI.s1 UI-S-GN1 Euprymna scolo... 42 0.20 2
(AC144823) Danio rerio clone CH211-150P19, complete sequence. 42 0.20 4
(AC073740) Mus musculus clone RP23-274I22, WORKING DRAFT SEQ... 42 0.20 2
(CR848711) Zebrafish DNA sequence from clone CH211-226K23 in... 48 0.20 2
(AC126256) Mus musculus BAC clone RP24-235B15 from chromosom... 42 0.20 2
(AC149868) Mus musculus BAC clone RP23-226I6 from 7, complet... 42 0.21 2
(EF190092) Macrogalea sp. Malawi cytochrome oxidase subunit ... 42 0.21 3
(AC115599) Dictyostelium discoideum chromosome 2 map 4229098... 36 0.22 8
(CN697522) E0395E06-5 NIA Mouse E10.5 whole embryo cDNA libr... 34 0.22 3
(AC155101) Medicago truncatula clone mth2-139j13, complete s... 44 0.22 5
(AC181526) Strongylocentrotus purpuratus clone R3-1110B11, W... 42 0.22 4
(CT376355) Sus scrofa genomic clone CH242-437F21, genomic su... 42 0.22 2
(AC173358) Strongylocentrotus purpuratus clone R3-1116I4, WO... 40 0.22 7
(AC023792) Homo sapiens 3 BAC CTC-503A18 (Roswell Park Cance... 38 0.23 4
(AC209033) Populus trichocarpa clone POP003-A05, complete se... 44 0.23 3
(EH009635) USDA-FP_182813 Lysiphlebus testaceipes adult whol... 46 0.24 2
(AC005505) Plasmodium falciparum chromosome 12 clone PFYAC18... 36 0.24 8
(AC235736) Glycine max strain Williams 82 clone GM_WBa0023O0... 40 0.24 4
(BX530068) Zebrafish DNA sequence from clone CH211-1N9 in li... 44 0.25 5
(CT009666) Zebrafish DNA sequence *** SEQUENCING CANCELLED *... 34 0.25 2
(FE149510) LV_LO_RA005P16f Litopenaeus vannamei lymphoid org... 46 0.25 2
(BX649501) Zebrafish DNA sequence from clone DKEY-123F20 in ... 34 0.25 2
(CU694876) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 0.25 2
(CU019665) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.25 2
(AC201477) Strongylocentrotus purpuratus clone R3-3054L22, W... 34 0.25 2
(AC176040) Strongylocentrotus purpuratus clone R3-18J23, WOR... 36 0.25 2
(CU468915) Zebrafish DNA sequence from clone CH211-202L22 in... 36 0.25 2
(AC179987) Strongylocentrotus purpuratus clone R3-17G12, WOR... 38 0.25 2
(AC180855) Strongylocentrotus purpuratus clone R3-3069C1, WO... 34 0.26 2
(AC179488) Strongylocentrotus purpuratus clone R3-1035L11, W... 36 0.26 2
(AC177750) Strongylocentrotus purpuratus clone R3-1008A8, WO... 36 0.26 2
(X95973) S.douglasii mitochondrial OXI1 & RF1 genes. 34 0.26 3
(EY346515) CAWZ15106.fwd CAWZ Helobdella robusta Primary Lat... 40 0.27 2
(AJ581661) Dictyostelium discoideum partial dstB gene for Dd... 48 0.27 2
(AF356600) Dictyostelium discoideum filament-interacting pro... 46 0.28 3
(AM466929) Vitis vinifera contig VV78X087389.2, whole genome... 46 0.29 2
(M15085) T.brucei expressed copy of the ILTat 1.3 variable s... 44 0.29 3
(AP006852) Candida albicans genomic DNA, chromosome 7, compl... 36 0.30 14
(AF482397) Dictyostelium discoideum ABC transporter AbcG20 (... 38 0.30 2
(AC115592) Dictyostelium discoideum chromosome 2 map 1-12595... 48 0.30 6
(EK396618) 1095469523912 Global-Ocean-Sampling_GS-31-01-01-1... 42 0.30 2
(AQ934958) CpG2341A CpIOWAgDNA1 Cryptosporidium parvum genom... 32 0.31 3
(AC141748) Apis mellifera clone CH224-59E22, WORKING DRAFT S... 42 0.31 4
(AZ157936) SP_0059_A1_F01_SP6E Strongylocentrotus purpuratus... 36 0.32 2
(EL494542) D02_PFBAMHI-M-T3-PLATE18A.AB1 Blood stage Plasmod... 38 0.33 2
(AC173361) Strongylocentrotus purpuratus clone R3-1113J20, W... 38 0.33 3
(EY330070) CAWY3195.rev CAWY Helobdella robusta Subtracted E... 34 0.33 2
(BU497758) PfESToab87h07.y1 Plasmodium falciparum 3D7 asexua... 38 0.33 2
(FM916102) Brachionus plicatilis EST 5' end, clone sb102P002... 34 0.33 2
(FN357773) Schistosoma mansoni genome sequence supercontig S... 38 0.33 6
(AZ692076) ENTMH69TR Entamoeba histolytica Sheared DNA Entam... 32 0.33 3
(AF045453) Dictyostelium discoideum protein kinase YakA (yak... 38 0.34 2
(EB979721) 15488703 ZF40 Danio rerio cDNA clone 4218122, mRN... 40 0.34 2
(AC120406) Mus musculus chromosome 12, clone RP24-418L10, co... 48 0.34 4
(EB906793) 9344199 ZF30 Danio rerio cDNA clone 3320616, mRNA... 36 0.35 2
(FP016208) Zebrafish DNA sequence from clone CH73-335M24 in ... 48 0.36 3
(CU694269) Zebrafish DNA sequence from clone CH73-169F6 in l... 40 0.36 5
(AC197318) Ornithorhynchus anatinus clone OA_Bb-223I12, WORK... 42 0.37 4
(EH012222) USDA-FP_185144 Lysiphlebus testaceipes adult whol... 32 0.39 3
(DH205132) Oryzias latipes Fosmid clone:GOLWFno525_n13, forw... 40 0.40 2
(AC140154) Ornithorhynchus anatinus clone OA_Bb-169I9, WORKI... 36 0.41 4
(AC152002) Ornithorhynchus anatinus chromosome UNK clone OAB... 38 0.41 4
(FP102462) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.41 6
(BX323065) Zebrafish DNA sequence from clone DKEYP-68F6 in l... 42 0.41 4
(AC180376) Strongylocentrotus purpuratus clone R3-3113A18, W... 48 0.42 3
(AC212803) Populus trichocarpa clone POP029-P20, complete se... 44 0.42 4
(CL648339) CH213-172L02.SP6 CH213 Gasterosteus aculeatus gen... 46 0.43 2
(CU062484) Zebrafish DNA sequence from clone CH73-329L6 in l... 42 0.43 5
(AC135253) Homo sapiens 3 BAC RP11-324L7 (Roswell Park Cance... 38 0.44 5
(CZ982560) 198663 Tomato MboI BAC Library Solanum lycopersic... 40 0.44 3
(CU929219) Zebrafish DNA sequence from clone CH1073-513E17 i... 48 0.44 1
(CU627989) Zebrafish DNA sequence from clone CH1073-189B15 i... 48 0.44 1
(CU571164) Zebrafish DNA sequence from clone CH73-230E15 in ... 48 0.44 1
(CU302309) Zebrafish DNA sequence from clone DKEY-80C17 in l... 48 0.44 1
(CU062487) Zebrafish DNA sequence from clone DKEY-254E3 in l... 48 0.44 1
(CT971502) Zebrafish DNA sequence from clone CH73-34C15 in l... 48 0.44 1
(CT955964) Zebrafish DNA sequence from clone CH1073-265L12 i... 48 0.44 1
(CT737136) Zebrafish DNA sequence from clone DKEYP-12B1 in l... 48 0.44 1
(CT573208) Zebrafish DNA sequence from clone CH73-52H17 in l... 48 0.44 1
(CR936261) Zebrafish DNA sequence from clone DKEY-207A6 in l... 48 0.44 1
(CR384103) Zebrafish DNA sequence from clone DKEY-215K6 in l... 48 0.44 1
(CR356225) Zebrafish DNA sequence from clone DKEY-210E9 in l... 48 0.44 1
(CR352322) Zebrafish DNA sequence from clone DKEY-261A18 in ... 48 0.44 1
(CR339062) Zebrafish DNA sequence from clone CH211-285J22 in... 48 0.44 1
(BX927076) Zebrafish DNA sequence from clone CH211-241L24 in... 48 0.44 1
(BX908393) Zebrafish DNA sequence from clone CH211-180H19 in... 48 0.44 1
(BX784022) Zebrafish DNA sequence from clone CH211-152C8 in ... 48 0.44 1
(BX537168) Zebrafish DNA sequence from clone DKEY-105O6 in l... 48 0.44 1
(BX537141) Zebrafish DNA sequence from clone DKEY-9E8 in lin... 48 0.44 1
(BX511298) Zebrafish DNA sequence from clone DKEY-210E13 in ... 48 0.44 1
(BX510939) Zebrafish DNA sequence from clone CH211-78C9 in l... 48 0.44 1
(BX470227) Zebrafish DNA sequence from clone CH211-12D10 in ... 48 0.44 1
(BX470131) Zebrafish DNA sequence from clone CH211-175M2 in ... 48 0.44 1
(BX321904) Zebrafish DNA sequence from clone DKEY-279K15 in ... 48 0.44 1
(BX248091) Zebrafish DNA sequence from clone DKEY-257I9. 48 0.44 1
(BX005398) Zebrafish DNA sequence from clone CH211-207O17 in... 48 0.44 1
(BX004778) Zebrafish DNA sequence from clone DKEY-87L3 in li... 48 0.44 1
(AB075928) Danio rerio CNR family (zCNRv1, zCNRv2, zCNRv3, z... 48 0.44 1
(G38811) TA1 Plasmodium falciparum haploid Plasmodium falcip... 48 0.44 1
(DQ689406) Mus musculus piRNA piR-104728, complete sequence. 48 0.44 1
(CT025624) Mouse DNA sequence from clone RP24-212N20 on chro... 48 0.44 1
(AL806535) Mouse DNA sequence from clone RP23-456J6 on chrom... 48 0.44 1
(AC161342) Mus musculus chromosome 1, clone RP23-313K17, com... 48 0.44 1
(AC161254) Mus musculus BAC clone RP24-124O5 from chromosome... 48 0.44 1
(AC147634) Mus musculus BAC clone RP23-305G22 from 10, compl... 48 0.44 1
(AC147513) Mus musculus chromosome 1, clone RP23-105K16, com... 48 0.44 1
(AC139335) Mus musculus BAC clone RP23-376N11 from chromosom... 48 0.44 1
(AC129777) Mus musculus BAC clone RP23-281H23 from 8, comple... 48 0.44 1
(AC129024) Mus musculus BAC clone RP23-436D14 from chromosom... 48 0.44 1
(AC125184) Mus musculus BAC clone RP23-299L9 from chromosome... 48 0.44 1
(AC124715) Mus musculus BAC clone RP24-130P22 from chromosom... 48 0.44 1
(CR954193) Medicago truncatula chromosome 5 clone mth2-27a1,... 48 0.44 1
(CR382122) Kluyveromyces lactis strain NRRL Y-1140 chromosom... 48 0.44 1
(AP010576) Lotus japonicus genomic DNA, chromosome 1, clone:... 48 0.44 1
(AP009414) Solanum lycopersicum genomic DNA, chromosome 8, c... 48 0.44 1
(AM448889) Vitis vinifera contig VV78X052342.9, whole genome... 48 0.44 1
(AM447939) Vitis vinifera contig VV78X012538.12, whole genom... 48 0.44 1
(AM442656) Vitis vinifera contig VV78X217168.5, whole genome... 48 0.44 1
(AM432915) Vitis vinifera contig VV78X026469.1, whole genome... 48 0.44 1
(AM427079) Vitis vinifera contig VV78X211230.5, whole genome... 48 0.44 1
(AC215630) Populus trichocarpa clone POP049-I09, complete se... 48 0.44 1
(AC165053) Phakopsora pachyrhizi clone JGIAFNA-1305N22, comp... 48 0.44 1
(CQ870192) Sequence 613 from Patent WO2004074320. 48 0.44 1
(FM162579) Trypanosoma brucei Lister 427 surface glycoprotei... 48 0.44 1
(FM162573) Trypanosoma brucei Lister 427 surface glycoprotei... 48 0.44 1
(AY132791) Fenneropenaeus chinensis clone RS0859 microsatell... 48 0.44 1
(AF222717) Plasmodium falciparum clone 3D7 myosin PfM-C gene... 48 0.44 1
(AF170073) Plasmodium falciparum sexual stage-specific prote... 48 0.44 1
(AF153878) Plasmodium falciparum isolate CS167, microsatelli... 48 0.44 1
(AF153877) Plasmodium falciparum isolate CS47, microsatellit... 48 0.44 1
(AF153876) Plasmodium falciparum isolate CS38, microsatellit... 48 0.44 1
(AF153875) Plasmodium falciparum isolate CS79, microsatellit... 48 0.44 1
(AF153874) Plasmodium falciparum isolate CS197, microsatelli... 48 0.44 1
(AF010507) Plasmodium falciparum microsatellite TA1 sequence. 48 0.44 1
(AC171131) Helobdella robusta clone CH306-1A2, complete sequ... 48 0.44 1
(AC171127) Helobdella robusta clone CH306-1A1, complete sequ... 48 0.44 1
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 48 0.44 1
(AC115584) Dictyostelium discoideum chromosome 2 map complem... 48 0.44 1
(AL606923) Human DNA sequence from clone RP11-361F19 on chro... 48 0.44 1
(AL590290) Human DNA sequence from clone RP11-228O6 on chrom... 48 0.44 1
(AC092927) Homo sapiens 3 BAC RP11-791I24 (Roswell Park Canc... 48 0.44 1
(AC160716) Bos taurus clone CH240-84D3, WORKING DRAFT SEQUEN... 48 0.44 1
(AC157974) Strongylocentrotus purpuratus clone R3-4002C12, W... 48 0.44 1
(AC157973) Strongylocentrotus purpuratus clone R3-4002B23, W... 48 0.44 1
(AC157958) Strongylocentrotus purpuratus clone R3-4002H9, WO... 48 0.44 1
(AC147393) Ornithorhynchus anatinus clone OA_Bb-332C15, WORK... 48 0.44 1
(AC146846) Ornithorhynchus anatinus clone OA_Bb-393H9, WORKI... 48 0.44 1
(AC144999) Pan troglodytes clone CH251-535N14, WORKING DRAFT... 48 0.44 1
(AC137297) Rattus norvegicus clone CH230-unknown, *** SEQUEN... 48 0.44 1
(AC136667) Rattus norvegicus clone CH230-431G5, WORKING DRAF... 48 0.44 1
(AC131350) Rattus norvegicus clone CH230-17E9, WORKING DRAFT... 48 0.44 1
(AC130863) Rattus norvegicus clone CH230-46H7, WORKING DRAFT... 48 0.44 1
(AC129699) Rattus norvegicus clone CH230-11I22, *** SEQUENCI... 48 0.44 1
(AC128509) Rattus norvegicus clone CH230-34N17, *** SEQUENCI... 48 0.44 1
(AC128295) Rattus norvegicus clone CH230-170A10, WORKING DRA... 48 0.44 1
(AC127451) Rattus norvegicus clone CH230-61E14, WORKING DRAF... 48 0.44 1
(AC126747) Rattus norvegicus clone CH230-7O17, WORKING DRAFT... 48 0.44 1
(AC120561) Rattus norvegicus clone CH230-142O20, WORKING DRA... 48 0.44 1
(AC120204) Pan troglodytes clone RP43-85H24, WORKING DRAFT S... 48 0.44 1
(AC119251) Mus musculus clone RP24-277B22, WORKING DRAFT SEQ... 48 0.44 1
(AC115495) Rattus norvegicus clone CH230-130J18, *** SEQUENC... 48 0.44 1
(AC115275) Rattus norvegicus clone CH230-23H3, *** SEQUENCIN... 48 0.44 1
(AC109194) Mus musculus clone RP24-216O7, WORKING DRAFT SEQU... 48 0.44 1
(AC108624) Rattus norvegicus clone CH230-36F2, *** SEQUENCIN... 48 0.44 1
(AC106939) Rattus norvegicus clone CH230-272N13, WORKING DRA... 48 0.44 1
(AC105539) Rattus norvegicus clone CH230-232H20, *** SEQUENC... 48 0.44 1
(AC099306) Rattus norvegicus clone CH230-199B5, *** SEQUENCI... 48 0.44 1
(FP236857) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.44 1
(FP236450) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.44 1
(FP103056) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.44 1
(CU855485) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 48 0.44 1
(CU682767) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.44 1
(AC079477) Mus musculus clone RP23-143D14, WORKING DRAFT SEQ... 48 0.44 1
(AC068316) Homo sapiens chromosome 3 clone RP11-304C15 map 3... 48 0.44 1
(AC040902) Homo sapiens chromosome 3 clone RP11-791I24 map 3... 48 0.44 1

>(C94441) Dictyostelium discoideum slug cDNA, clone SSK807.
Length = 662

Score = 803 bits (405), Expect(2) = 0.0
Identities = 411/411 (100%)
Strand = Plus / Plus


Query: 1 gaaattgttcaaatgttttattatcaactgacacattattcatctgtgaattaagtaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaaattgttcaaatgttttattatcaactgacacattattcatctgtgaattaagtaaat 60


Query: 61 cataccatactttatcatcaccaaaaaccaccaatacaacaatgctatcatttataaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cataccatactttatcatcaccaaaaaccaccaatacaacaatgctatcatttataaata 120


Query: 121 attcaccaaattcaacagtttcaaatgaaataattgaaatgatttcaggatatttccaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attcaccaaattcaacagtttcaaatgaaataattgaaatgatttcaggatatttccaaa 180


Query: 181 ttaaaatttcaacaaaaccatcaacaactgatgatgataataataaaaataatgatgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttaaaatttcaacaaaaccatcaacaactgatgatgataataataaaaataatgatgatg 240


Query: 241 gggatagtgaaattgatagtgttgggaaatctgcagtagattcttcaaaatctaataata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggatagtgaaattgatagtgttgggaaatctgcagtagattcttcaaaatctaataata 300


Query: 301 atagtggtggtggtggtaatngngaattatatttattaataatattaccaactgtattat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atagtggtggtggtggtaatngngaattatatttattaataatattaccaactgtattat 360


Query: 361 tcattattgtagcagcattagttgcaattttcataaagacaagagtatccc 411
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcattattgtagcagcattagttgcaattttcataaagacaagagtatccc 411

Score = 214 bits (108), Expect(2) = 0.0
Identities = 108/108 (100%)
Strand = Plus / Plus


Query: 452 ggatagtattaatgtaccattccaaatgttggatgaaatcaccacatagcaattagataa 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ggatagtattaatgtaccattccaaatgttggatgaaatcaccacatagcaattagataa 511


Query: 512 ccaccaaaattggataccatttaatgatttaattattggtggtacaac 559
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ccaccaaaattggataccatttaatgatttaattattggtggtacaac 559

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 815,658,483
Number of extensions: 62581209
Number of successful extensions: 6668828
Number of sequences better than 10.0: 2703
Length of query: 661
Length of database: 104,622,809,269
Length adjustment: 24
Effective length of query: 637
Effective length of database: 102,084,959,077
Effective search space: 65028118932049
Effective search space used: 65028118932049
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 6.20
Homology vs Protein
Query= Contig-U05714-1 (Contig-U05714-1Q) /CSM_Contig/Contig-U05714-1Q.Seq.d
(661 letters)

Database: nrp_A
3,204,285 sequences; 1,040,966,779 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

(Q06885) RecName: Full=Glycoprotein gp100; AltName: Full=P29F8; ... 180 4e-44

>(Q06885) RecName: Full=Glycoprotein gp100; AltName: Full=P29F8;
Flags: Precursor; &L04286_1(L04286|pid:none)
Length = 544

Score = 180 bits (456), Expect = 4e-44
Identities = 103/165 (62%), Positives = 104/165 (63%)
Frame = +3

Query: 3 NCSNVLLSTDTLFICELSKSYHTLSSPKTTNTTMLSFINNSPNSTVSNEIIEMISGYFQI 182
NCSNVLLSTDTLFICELSKSYHTLSSPKTTNTTMLSFINNSPNSTVSNEIIEMISGYFQI
Sbjct: 380 NCSNVLLSTDTLFICELSKSYHTLSSPKTTNTTMLSFINNSPNSTVSNEIIEMISGYFQI 439

Query: 183 KISTKPSTTXXXXXXXXXXXXSEIDSVGKSAVDXXXXXXXXXXXXXXELYLLIILPTXXX 362
KISTKPSTT SEIDSVGKSAVD +LYLLIILPT
Sbjct: 440 KISTKPSTTDDDNNKNNDDGDSEIDSVGKSAVDSSKSNNNSGGGGNKKLYLLIILPTVLF 499

Query: 363 XXXXXXXXXXXKTRXXXXXXXXXXXXXXXXXXXXXPFQMLDEITT 497
KTR PFQMLDEITT
Sbjct: 500 IIVAALVAIFIKTRVSQNSGSKVNKNNNKKDSINVPFQMLDEITT 544

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3204285
Number of Hits to DB: 612,399,698
Number of extensions: 7780806
Number of successful extensions: 20284
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20270
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 1,040,966,779
Length adjustment: 124
Effective length of query: 96
Effective length of database: 643,635,439
Effective search space: 61789002144
Effective search space used: 61789002144
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 31 (16.5 bits)

PSORT

psg: 0.75 gvh: 0.43 alm: 0.11 top: 0.80 tms: 0.07 mit: 0.23 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 1.00 tyr: 0.00 leu: 0.09 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 1.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 0.00

48.0 %: nuclear
28.0 %: cytoplasmic
12.0 %: mitochondrial
8.0 %: Golgi
4.0 %: vesicles of secretory system

>> prediction for Contig-U05714-1 is nuc

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0