Homology vs DNA |
Query= Contig-U05658-1 (Contig-U05658-1Q) /CSM_Contig/Contig-U05658-1Q.Seq.d (241 letters)
Database: ddbj_B 105,743,758 sequences; 104,622,809,269 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(C91442) Dictyostelium discoideum slug cDNA, clone SSK256. 295 4e-76 1 (AC155977) Xenopus (Silurana) tropicalis clone CH216-60E17, ... 50 0.038 1 (EY363736) CAWZ8932.rev CAWZ Helobdella robusta Primary Late... 50 0.038 1 (EY350213) CAWZ17475.rev CAWZ Helobdella robusta Primary Lat... 50 0.038 1 (EU308509) Silene integripetala ribulose-1,5-bisphosphate ca... 48 0.15 1 (BX255965) Zebrafish DNA sequence from clone CH211-270C19. 36 0.34 2 (BX539343) Zebrafish DNA sequence from clone DKEY-58K6 in li... 46 0.60 1 (BX511264) Zebrafish DNA sequence from clone DKEY-31O6 in li... 46 0.60 1 (CU856334) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 46 0.60 1 (AZ684808) ENTKP71TR Entamoeba histolytica Sheared DNA Entam... 46 0.60 1 (AZ545823) ENTED88TF Entamoeba histolytica Sheared DNA Entam... 46 0.60 1 (AZ540780) ENTGH35TF Entamoeba histolytica Sheared DNA Entam... 46 0.60 1 (AZ536178) ENTBG54TF Entamoeba histolytica Sheared DNA Entam... 46 0.60 1 (ER391776) 1095328072536 Global-Ocean-Sampling_GS-34-01-01-1... 46 0.60 1 (AM641790) Entamoeba dispar GSS, clone dispar8e09.p1k. 46 0.60 1 (AM637496) Entamoeba dispar GSS, clone dispar45g12.p1k. 46 0.60 1 (DU887195) 394552 Tomato HindIII BAC Library Solanum lycoper... 46 0.60 1 (DH282750) Oryzias latipes Fosmid clone:GOLWFno622_k15, reve... 46 0.60 1 (AG359355) Mus musculus molossinus DNA, clone:MSMg01-159G16.... 46 0.60 1 (FG613042) stem_S093_E12.SEQ Opium poppy stem cDNA library P... 46 0.60 1 (EX556515) AIAE-aab15b01.b1 Ancylostoma_caninum_EST_Female_p... 46 0.60 1 (ES817030) UFL_295_40 Cotton fiber 0-10 day post anthesis Go... 46 0.60 1 (AL116688) Botrytis cinerea strain T4 cDNA library. 36 1.6 2 (CU928063) Zebrafish DNA sequence from clone CH73-97E20 in l... 44 2.4 1 (CR388147) Zebrafish DNA sequence from clone DKEYP-72E1 in l... 44 2.4 1 (BX928740) Zebrafish DNA sequence from clone CH211-245J22 in... 44 2.4 1 (AC159638) Mus musculus BAC clone RP24-78C16 from chromosome... 44 2.4 1 (AC123957) Mus musculus BAC clone RP23-302N2 from 12, comple... 44 2.4 1 (AC122289) Mus musculus BAC clone RP23-254F12 from 3, comple... 44 2.4 1 (AC161283) Pan troglodytes BAC clone CH251-354N8 from chromo... 44 2.4 1 (EU308516) Silene schafta ribulose-1,5-bisphosphate carboxyl... 44 2.4 1 (AM473743) Vitis vinifera contig VV78X152254.2, whole genome... 44 2.4 1 (AM461959) Vitis vinifera contig VV78X175541.7, whole genome... 44 2.4 1 (AM446671) Vitis vinifera contig VV78X225545.7, whole genome... 44 2.4 1 (AM432847) Vitis vinifera contig VV78X271334.9, whole genome... 44 2.4 1 (EU009285) Aspisoma sp. KSHX47o 16S ribosomal RNA gene, part... 44 2.4 1 (AL844509) Plasmodium falciparum 3D7 chromosome 13. 44 2.4 1 (AL445220) Human DNA sequence from clone RP11-317B3 on chrom... 44 2.4 1 (AC112621) Rattus norvegicus clone CH230-33L3, *** SEQUENCIN... 44 2.4 1 (AC106479) Rattus norvegicus clone CH230-169D6, WORKING DRAF... 44 2.4 1 (FP236802) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 2.4 1 (CU104722) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 2.4 1 (BH158495) ENTTQ59TR Entamoeba histolytica Sheared DNA Entam... 44 2.4 1 (AZ541411) ENTFG43TR Entamoeba histolytica Sheared DNA Entam... 44 2.4 1 (AZ191331) SP_1019_A2_B08_T7A Strongylocentrotus purpuratus,... 44 2.4 1 (AM607813) Entamoeba invadens IP1 GSS, clone inv083c11.p1k. 44 2.4 1 (EJ754959) 1092963068986 Global-Ocean-Sampling_GS-30-02-01-1... 44 2.4 1 (EJ738342) 1092961215740 Global-Ocean-Sampling_GS-30-02-01-1... 44 2.4 1 (AL217998) Tetraodon nigroviridis genome survey sequence T7 ... 44 2.4 1 (CR107587) Reverse strand read from insert in 5'HPRT inserti... 44 2.4 1 (BZ390919) EINDC08TF EI_10_12_KB Entamoeba invadens genomic ... 44 2.4 1 (BX179847) Danio rerio genomic clone DKEY-179H8, genomic sur... 44 2.4 1 (DV421066) NADY651TF Aedes aegypti infected with Dengue viru... 44 2.4 1 (DV410521) NADZG01TR Aedes aegypti infected with Dengue viru... 44 2.4 1 (DV318390) NABNX80TF Aedes aegypti infected with Brugia Mala... 44 2.4 1 (DV295779) NABML55TF Aedes aegypti infected with Brugia Mala... 44 2.4 1 (DV286265) NAAI621TR Aedes aegypti - Fat Bodies Normalized (... 44 2.4 1 (DV286264) NAAI621TF Aedes aegypti - Fat Bodies Normalized (... 44 2.4 1 (CP001466) Borrelia spielmanii A14S plasmid A14S_lp36, compl... 44 2.4 1 (X95275) Plasmodium falciparum complete gene map of plastid-... 34 3.1 3 (EU000309) Aphrocallistes vastus mitochondrion, complete gen... 32 5.1 2 (FP236426) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 5.9 2 (ED624933) GM_WBa0022C23.r GM_WBa Glycine max genomic clone ... 34 6.0 2 (GD265449) USDA-FP_197203 Asian citrus psyllid testes (Hemip... 34 6.0 2 (AM472831) Vitis vinifera contig VV78X249372.11, whole genom... 40 6.1 2 (ED691289) GM_WBb0028L06.r GM_WBb Glycine max genomic clone ... 34 6.1 2 (DQ336395) Dictyostelium citrinum mitochondrion, complete ge... 38 6.2 2 (EJ751080) 1092963036622 Global-Ocean-Sampling_GS-30-02-01-1... 38 6.4 2 (AC235881) Glycine max strain Williams 82 clone GM_WBc0011H2... 38 6.5 5 (FM248993) Caenorhabditis elegans EST, clone C08_ce4.trans.... 30 6.7 3 (ER525594) 1093015634568 Global-Ocean-Sampling_GS-35-01-01-1... 40 6.9 2 (EJ750903) 1092963035470 Global-Ocean-Sampling_GS-30-02-01-1... 38 7.5 2 (V00701) Yeast mitochondrial HpaII-fragment 2. 34 8.2 2 (CU856221) Zebrafish DNA sequence from clone CH1073-83M3 in ... 42 9.3 1 (CU467945) Zebrafish DNA sequence from clone CH73-138E9 in l... 42 9.3 1 (CU467642) Zebrafish DNA sequence from clone CH73-4C22 in li... 42 9.3 1 (CT573338) Zebrafish DNA sequence from clone DKEY-3A9 in lin... 42 9.3 1 (CR925709) Zebrafish DNA sequence from clone DKEY-21O19 in l... 42 9.3 1 (BX640518) Zebrafish DNA sequence from clone DKEY-278M12 in ... 42 9.3 1 (BX276119) Zebrafish DNA sequence from clone CH211-200N10 in... 42 9.3 1 (BX072561) Zebrafish DNA sequence from clone CH211-157C18 in... 42 9.3 1 (BX004781) Zebrafish DNA sequence from clone CH211-149G8 in ... 42 9.3 1 (AL929267) Zebrafish DNA sequence from clone CH211-2M15 in l... 42 9.3 1 (AL929216) Zebrafish DNA sequence from clone CH211-138G9 in ... 42 9.3 1 (AC149900) Xenopus (Silurana) tropicalis clone ISB-357K7, co... 42 9.3 1 (CT010567) Mouse DNA sequence from clone RP23-387D5 on chrom... 42 9.3 1 (AL731700) Mouse DNA sequence from clone RP23-239G1 on chrom... 42 9.3 1 (AC147641) Mus musculus BAC clone RP23-43L22 from 14, comple... 42 9.3 1 (AC132881) Mus musculus chromosome 14, clone RP24-246K16, co... 42 9.3 1 (AC127250) Mus musculus BAC clone RP24-482H23 from chromosom... 42 9.3 1 (AC112677) Mus musculus chromosome 3, clone RP23-176J23, com... 42 9.3 1 (FP017205) Medicago truncatula chromosome 5 clone mte1-4m19,... 42 9.3 1 (D82812) Populus kitakamiensis cyp73a gene for cinnamic acid... 42 9.3 1 (AM489361) Vitis vinifera contig VV78X102415.5, whole genome... 42 9.3 1 (AM483618) Vitis vinifera contig VV78X062662.6, whole genome... 42 9.3 1 (AM481260) Vitis vinifera contig VV78X161420.17, whole genom... 42 9.3 1 (AM478227) Vitis vinifera contig VV78X078878.5, whole genome... 42 9.3 1 (AM471157) Vitis vinifera contig VV78X211407.11, whole genom... 42 9.3 1 (AM471138) Vitis vinifera contig VV78X180937.14, whole genom... 42 9.3 1 (AM465612) Vitis vinifera, whole genome shotgun sequence, co... 42 9.3 1 (AM458438) Vitis vinifera contig VV78X022290.27, whole genom... 42 9.3 1 (AM458089) Vitis vinifera contig VV78X011311.6, whole genome... 42 9.3 1 (AM454416) Vitis vinifera contig VV78X047858.5, whole genome... 42 9.3 1 (AM449705) Vitis vinifera, whole genome shotgun sequence, co... 42 9.3 1 (AM442883) Vitis vinifera contig VV78X056828.8, whole genome... 42 9.3 1 (AM429944) Vitis vinifera contig VV78X156953.4, whole genome... 42 9.3 1 (AC182714) Populus trichocarpa clone Pop1-86K15, complete se... 42 9.3 1 (AC051629) Arabidopsis thaliana chromosome I BAC F6I1 genomi... 42 9.3 1 (AC007651) Arabidopsis thaliana chromosome I BAC F20D23 geno... 42 9.3 1 (BD430793) GENOME SEQUENCE AND POLYPEPTIDES OF PYROCOCCUS AB... 42 9.3 1 (AX347010) Sequence 2081 from Patent WO0200928. 42 9.3 1 (AX041918) Sequence 813 from Patent WO0065062. 42 9.3 1 (Z82064) Caenorhabditis elegans Cosmid W02B9. 42 9.3 1 (AC156313) Bos taurus clone CH240-48D15, WORKING DRAFT SEQUE... 42 9.3 1 (AC134544) Mus musculus chromosome UNK clone RP24-456G13, WO... 42 9.3 1 (AC128161) Rattus norvegicus clone CH230-58G18, *** SEQUENCI... 42 9.3 1 (AC118398) Rattus norvegicus clone CH230-117P20, *** SEQUENC... 42 9.3 1 (AC096068) Rattus norvegicus clone CH230-20F15, *** SEQUENCI... 42 9.3 1 (FP017204) Medicago truncatula chromosome 5 clone mth2-79h2,... 42 9.3 1 (CU695002) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.3 1 (CT961048) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.3 1 (CT573307) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.3 1 (CR940352) Theileria annulata genomic DNA chromosome 3. 42 9.3 1 (CR456630) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 42 9.3 1 (AC233160) Medicago truncatula clone mth2-28d24, WORKING DRA... 42 9.3 1 (AC204168) Xenopus (Silurana) tropicalis clone ISB1-98B5, WO... 42 9.3 1 (AC185814) Bos taurus clone RP42-191L5, WORKING DRAFT SEQUEN... 42 9.3 1 (AC180836) Strongylocentrotus purpuratus clone R3-3069K9, WO... 42 9.3 1 (AC178255) Strongylocentrotus purpuratus clone R3-3086O12, W... 42 9.3 1 (AC169307) Bos taurus clone CH240-258M1, WORKING DRAFT SEQUE... 42 9.3 1 (AC167883) Bos taurus clone CH240-193I2, WORKING DRAFT SEQUE... 42 9.3 1 (FH899353) CHO_ONF064xf20f1.ab1 CHO_ONF Nicotiana tabacum ge... 42 9.3 1 (FH327046) CHO_OF4561xd21f1.ab1 CHO_OF4 Nicotiana tabacum ge... 42 9.3 1 (ER505764) 1093015421280 Global-Ocean-Sampling_GS-35-01-01-1... 42 9.3 1 (EJ788185) 1093017363228 Global-Ocean-Sampling_GS-30-02-01-1... 42 9.3 1 (AM616862) Entamoeba invadens IP1 GSS, clone inv085h08.q1k. 42 9.3 1 (AM611388) Entamoeba invadens IP1 GSS, clone inv006d08.q1k. 42 9.3 1 (AM608595) Entamoeba invadens IP1 GSS, clone inv090e08.p1k. 42 9.3 1 (AM608240) Entamoeba invadens IP1 GSS, clone inv087b08.q1k. 42 9.3 1 (EJ279827) 1095366046187 Global-Ocean-Sampling_GS-27-01-01-1... 42 9.3 1 (EI178154) MUGQ_CH252P183K08Sp6_CN260_022 CHORI-252 Vervet M... 42 9.3 1 (ED681363) GM_WBb0014I16.f GM_WBb Glycine max genomic clone ... 42 9.3 1 (ED629794) GM_WBa0029N19.r GM_WBa Glycine max genomic clone ... 42 9.3 1 (ED629749) GM_WBa0029M19.r GM_WBa Glycine max genomic clone ... 42 9.3 1 (ED629620) GM_WBa0029J18.r GM_WBa Glycine max genomic clone ... 42 9.3 1 (DX547324) GH_MBb0052P10f GH_MBb Gossypium hirsutum genomic ... 42 9.3 1 (DX431506) BE1030_B01_F IASMA L1 HindIII BAC library Vitis v... 42 9.3 1 (DH802542) Rattus norvegicus DNA, BAC clone: RNB1-398J11, 3'... 42 9.3 1 (DE446202) Bombyx mori genomic DNA, Fosmid clone:GBMFno36_o1... 42 9.3 1 (DE395622) Bombyx mori genomic DNA, BAC clone:17D5D. 42 9.3 1 (DE348843) Bombyx mori genomic DNA, BAC clone:BET_058_P22. 42 9.3 1 (CZ896263) gx84g06.x1.b.screen Pine methylation unfiltered l... 42 9.3 1 (CW947828) TcB31.1_H09_SP6 Tribolium BAC library Tribolium c... 42 9.3 1 (CU751968) A BAC library has been constructed from PN40024 g... 42 9.3 1 (CR238147) Reverse strand read from insert in 5'HPRT inserti... 42 9.3 1 (CR237822) Reverse strand read from insert in 5'HPRT inserti... 42 9.3 1 (CR155754) Reverse strand read from insert in 5'HPRT inserti... 42 9.3 1 (CR127946) Reverse strand read from insert in 5'HPRT inserti... 42 9.3 1 (CR066052) Reverse strand read from insert in 5'HPRT inserti... 42 9.3 1 (CL095020) ISB1-25O22_T7.1 ISB1 Xenopus (Silurana) tropicali... 42 9.3 1 (CG967510) MBEGH71TR mth2 Medicago truncatula genomic clone ... 42 9.3 1 (CG812941) SOYEV90TV LargeInsertSoybeanGenLib Glycine max ge... 42 9.3 1 (CE429406) tigr-gss-dog-17000362924987 Dog Library Canis lup... 42 9.3 1 (CE405431) tigr-gss-dog-17000335358063 Dog Library Canis lup... 42 9.3 1 (CC538341) CH240_418E17.TARBAC13P2 CHORI-240 Bos taurus geno... 42 9.3 1 (BZ400653) EINCQ06TF EI_10_12_KB Entamoeba invadens genomic ... 42 9.3 1 (BX221296) Danio rerio genomic clone DKEY-242K6, genomic sur... 42 9.3 1 (BX171626) Danio rerio genomic clone DKEY-174M17, genomic su... 42 9.3 1 (BX159887) Danio rerio genomic clone DKEY-121H8, genomic sur... 42 9.3 1 (BX156657) Danio rerio genomic clone DKEY-152J3, genomic sur... 42 9.3 1 (BX155970) Danio rerio genomic clone DKEY-123P14, genomic su... 42 9.3 1 (BH922573) odh83h03.g1 B.oleracea002 Brassica oleracea genom... 42 9.3 1 (AG121007) Pan troglodytes DNA, clone: PTB-129O20.F. 42 9.3 1 (DN585626) 92296119 Sea Urchin primary mesenchyme cell cDNA ... 42 9.3 1 (AU073359) Dictyostelium discoideum slug cDNA, clone SSG774. 42 9.3 1 (CO868922) Ep_CT_04B04_SKPL Eurydice pulchra CT library Eury... 42 9.3 1 (CK521831) rswea0_006816.y1 swe Bombyx mori cDNA, mRNA seque... 42 9.3 1 (CK423792) AUF_IpSpn_69_g06 Spleen cDNA library Ictalurus pu... 42 9.3 1 (CJ457233) Macaca fascicularis mRNA, clone: QflA-23108, 5' e... 42 9.3 1 (BX696203) Xenopus tropicalis EST, clone TNeu086d10 3'. 42 9.3 1 (BW997976) Bombyx mori mRNA, clone:ES2878, expressed in fert... 42 9.3 1 (BQ545139) EST628766 TpMugugaSh01 Theileria parva cDNA clone... 42 9.3 1 (BP179517) Bombyx mori cDNA, clone: ovS303F11f, 5' end seque... 42 9.3 1 (BP118372) Bombyx mori cDNA, clone:ce--1804, 5' end sequence. 42 9.3 1 (BM649537) 17000687369041 A.Gam.ad.cDNA1 Anopheles gambiae c... 42 9.3 1 (BG439997) GA__Ea0005I13f Gossypium arboreum 7-10 dpa fiber ... 42 9.3 1 (BB991245) Bombyx mori cDNA, clone:E_ET_MSV3_10D04_R_0, 3' e... 42 9.3 1 (BB985929) Bombyx mori cDNA, clone:E_ET_MSV3_11F01_F_0, 5' e... 42 9.3 1 (FF335008) 280458407 Pea aphid whole body normalized full le... 42 9.3 1 (FF304307) 279359743 Pea aphid whole body normalized full le... 42 9.3 1 (CP000721) Clostridium beijerinckii NCIMB 8052, complete gen... 42 9.3 1 (AJ248284) Pyrococcus abyssi complete genome; segment 2/6. 42 9.3 1 (AF211124) Carsonella ruddii country USA tryptophanyl-tRNA s... 42 9.3 1 (V00705) Yeast mitochondrial var1 gene (allele 40.0) a ribos... 34 9.5 2 (X75545) P.falciparum gene for tRNA I,A,N,L,R,V,R,M,T. 34 9.6 2
>(C91442) Dictyostelium discoideum slug cDNA, clone SSK256. Length = 242
Score = 295 bits (149), Expect = 4e-76 Identities = 149/149 (100%) Strand = Plus / Plus
Query: 93 ggtgataaatcgaaaagtagtcaagatagtgaagctattgataactctcaagaatataga 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93 ggtgataaatcgaaaagtagtcaagatagtgaagctattgataactctcaagaatataga 152
Query: 153 aattatatggctgcaactgaaggtctattccagaccgaaatatcaaaagaggatttcatc 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 aattatatggctgcaactgaaggtctattccagaccgaaatatcaaaagaggatttcatc 212
Query: 213 aaattataataaaattattataataagaa 241 ||||||||||||||||||||||||||||| Sbjct: 213 aaattataataaaattattataataagaa 241
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 105743758 Number of Hits to DB: 203,321,308 Number of extensions: 13314927 Number of successful extensions: 4017433 Number of sequences better than 10.0: 197 Length of query: 241 Length of database: 104,622,809,269 Length adjustment: 23 Effective length of query: 218 Effective length of database: 102,190,702,835 Effective search space: 22277573218030 Effective search space used: 22277573218030 X1: 11 (21.8 bits) S2: 21 (42.1 bits)
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