Contig-U01204-1
Contig ID Contig-U01204-1
Contig update 2001. 8.29
Contig sequence
>Contig-U01204-1 (Contig-U01204-1Q) /CSM_Contig/Contig-U01204-1Q.Seq.d
CAAAAATCAAAAATGTCAGCTACATTTAATGATATTTCATTTAGACATTT
ATTTTTTTTAGCATCATTAGGAATATGTTTAGCAATAATAGTAGCAGTTA
TGATTGGATTCTTTTTATATGGATTTATTAAATATGTAAAGAGAGGATTA
TCAAAAAAAGATGGTGCTAGATATGGTGGATATTTAGCATGGGAAGTATT
TTGGGTGGGTACTCCATTATTTGTATTAATGGCATCAGCATTCAATCAAA
TTCATTGGGCATTGGCATGGGTATTAATGGTAATCATTTTACAATCTGGT
TTTATGAAT----------ACAACATTCTCATACGATTGGTAATGAAACC
ATTATCATCGTTATGGATAGTTGGGTAGTTGATCAAATTCCTGATCAAGT
GTCTTGGATGGAACAAGTATTATCAGATAATAATAATAAAACATTTAAAT
TTGCTCTATATCATATCGCCCTCTATCCATGCACTAAAATTTCAATGGAT
GTTGAAATCTCTTCTTTAGCAAAAGAATTTTGGGGTCCAGTTTTTGATAA
ATATAATTTAACTGTTGGTTATGAAAATCATTATCATTTATATAAACGTT
CAAAACAATTAGTTAATGGCTTGGAACATCCAAATGGTACATTATATATT
GGTGATGGATCATGGGGTGTTGAAACTACAATGAAATTAAGAGATTATGA
TTATTTAGAAGTTTATGGTCGTATTCAACATGTTATTCATTCAATGGTAA
ATTCTCACAATTCAACTGTTAATATCGAAACAATAAACATTGATAATGAG
ATTTTCGATTCTTGGGAAAGAAAATTAAAATAAAATAATCTCATTATATA
AATTATAAATATATATATATATAAAAATAAAAATAAAAATAAAAAATTAT
TGTAATCATTTTACAATAAAAATAATAA

Gap gap included
Contig length 918
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 1928287
End point 1927368
Strand (PLUS/MINUS) MINUS
Number of clones 2
Number of EST 3
Link to clone list U01204
List of clone(s)

est1=SLD265F,1,310
est2=SLD262Z,311,920
est3=SLD265Z,399,920
Translated Amino Acid sequence
QKSKMSATFNDISFRHLFFLASLGICLAIIVAVMIGFFLYGFIKYVKRGLSKKDGARYGG
YLAWEVFWVGTPLFVLMASAFNQIHWALAWVLMVIILQSGFMN---

---QHSHTIGNETIIIVMDSWVVDQIPDQVSWMEQVLSDNNNKTFKFALYHIALYPCTKI
SMDVEISSLAKEFWGPVFDKYNLTVGYENHYHLYKRSKQLVNGLEHPNGTLYIGDGSWGV
ETTMKLRDYDYLEVYGRIQHVIHSMVNSHNSTVNIETINIDNEIFDSWERKLK*nnlii*
iiniyiyknknknkkll*sfynknn


Translated Amino Acid sequence (All Frames)
Frame A:
QKSKMSATFNDISFRHLFFLASLGICLAIIVAVMIGFFLYGFIKYVKRGLSKKDGARYGG
YLAWEVFWVGTPLFVLMASAFNQIHWALAWVLMVIILQSGFMN---

---ttfsydw**nhyhryg*lgs*sns*ssvldgtsiir****ni*icsisyrplsmh*n
fngc*nlffskrilgssf**i*fncwl*kslsfi*tfktis*wlgtskwyiiyw*wimgc
*nyneikrl*lfrslwsystcysfngkfsqfnc*yrnnkh***dfrflgkkikik*shyi
nykyiyi*k*k*k*kiiviilq*k**

Frame B:
knqkcqlhlmifhldiyff*hh*eyv*q***ql*ldsfymdllnm*redyqkkmvldmvd
i*hgkyfgwvlhyly*whqhsikfighwhgy*w*sfynlvl*---

---QHSHTIGNETIIIVMDSWVVDQIPDQVSWMEQVLSDNNNKTFKFALYHIALYPCTKI
SMDVEISSLAKEFWGPVFDKYNLTVGYENHYHLYKRSKQLVNGLEHPNGTLYIGDGSWGV
ETTMKLRDYDYLEVYGRIQHVIHSMVNSHNSTVNIETINIDNEIFDSWERKLK*nnlii*
iiniyiyknknknkkll*sfynknn

Frame C:
kiknvsyi**yfi*tfiffsiirnmfsnnsssydwilfiwiy*ickeriikkrwc*iwwi
fsmgsilggysiicingisiqsnslgigmgingnhftiwfye---

---nilirlvmkplsslwivg*likflikclgwnkyyqiiiikhlnllyiispsihalkf
qwmlksll*qknfgvqflinii*llvmkiiiiyinvqnn*lmawniqmvhyilvmdhgvl
klq*n*eimii*kfmvvfnmlfiqw*iltiqlliskq*tlimrfsilgken*nkiislyk
l*iyiyikikikiknycnhftikii

own update 2004. 6. 7
Homology vs CSM-cDNA
Query= Contig-U01204-1 (Contig-U01204-1Q)
/CSM_Contig/Contig-U01204-1Q.Seq.d
(928 letters)

Database: CSM
8361 sequences; 7,895,291 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U01204-1 (Contig-U01204-1Q) /CSM_Contig/Conti... 1489 0.0
Contig-U12244-1 (Contig-U12244-1Q) /CSM_Contig/Conti... 38 0.023
Contig-U08275-1 (Contig-U08275-1Q) /CSM_Contig/Conti... 38 0.023
Contig-U13865-1 (Contig-U13865-1Q) /CSM_Contig/Conti... 36 0.091
Contig-U13134-1 (Contig-U13134-1Q) /CSM_Contig/Conti... 36 0.091
Contig-U13046-1 (Contig-U13046-1Q) /CSM_Contig/Conti... 36 0.091
Contig-U12231-1 (Contig-U12231-1Q) /CSM_Contig/Conti... 36 0.091
Contig-U12109-1 (Contig-U12109-1Q) /CSM_Contig/Conti... 36 0.091
Contig-U11014-1 (Contig-U11014-1Q) /CSM_Contig/Conti... 36 0.091
Contig-U06398-1 (Contig-U06398-1Q) /CSM_Contig/Conti... 36 0.091

>Contig-U01204-1 (Contig-U01204-1Q) /CSM_Contig/Contig-U01204-1Q.Seq.d
Length = 928

Score = 1489 bits (751), Expect = 0.0
Identities = 811/826 (98%)
Strand = Plus / Plus


Query: 1 caaaaatcaaaaatgtcagctacatttaatgatatttcatttagacatttannnnnnnna 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 caaaaatcaaaaatgtcagctacatttaatgatatttcatttagacatttatttttttta 60


Query: 61 gcatcattaggaatatgtttagcaataatagtagcagttatgattggattctttttatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcatcattaggaatatgtttagcaataatagtagcagttatgattggattctttttatat 120


Query: 121 ggatttattaaatatgtaaagagaggattatcnnnnnnngatggtgctagatatggtgga 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 121 ggatttattaaatatgtaaagagaggattatcaaaaaaagatggtgctagatatggtgga 180


Query: 181 tatttagcatgggaagtattttgggtgggtactccattatttgtattaatggcatcagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatttagcatgggaagtattttgggtgggtactccattatttgtattaatggcatcagca 240


Query: 241 ttcaatcaaattcattgggcattggcatgggtattaatggtaatcattttacaatctggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcaatcaaattcattgggcattggcatgggtattaatggtaatcattttacaatctggt 300


Query: 301 tttatgaatnnnnnnnnnnacaacattctcatacgattggtaatgaaaccattatcatcg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttatgaatnnnnnnnnnnacaacattctcatacgattggtaatgaaaccattatcatcg 360


Query: 361 ttatggatagttgggtagttgatcaaattcctgatcaagtgtcttggatggaacaagtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttatggatagttgggtagttgatcaaattcctgatcaagtgtcttggatggaacaagtat 420


Query: 421 tatcagataataataataaaacatttaaatttgctctatatcatatcgccctctatccat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatcagataataataataaaacatttaaatttgctctatatcatatcgccctctatccat 480


Query: 481 gcactaaaatttcaatggatgttgaaatctcttctttagcaaaagaattttggggtccag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcactaaaatttcaatggatgttgaaatctcttctttagcaaaagaattttggggtccag 540


Query: 541 tttttgataaatataatttaactgttggttatgaaaatcattatcatttatataaacgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttttgataaatataatttaactgttggttatgaaaatcattatcatttatataaacgtt 600


Query: 601 caaaacaattagttaatggcttggaacatccaaatggtacattatatattggtgatggat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 caaaacaattagttaatggcttggaacatccaaatggtacattatatattggtgatggat 660


Query: 661 catggggtgttgaaactacaatgaaattaagagattatgattatttagaagtttatggtc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 catggggtgttgaaactacaatgaaattaagagattatgattatttagaagtttatggtc 720


Query: 721 gtattcaacatgttattcattcaatggtaaattctcacaattcaactgttaatatcgaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtattcaacatgttattcattcaatggtaaattctcacaattcaactgttaatatcgaaa 780


Query: 781 caataaacattgataatgagattttcgattcttgggaaagaaaatt 826
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 caataaacattgataatgagattttcgattcttgggaaagaaaatt 826


Score = 63.9 bits (32), Expect = 4e-10
Identities = 32/32 (100%)
Strand = Plus / Plus


Query: 897 ttattgtaatcattttacaataaaaataataa 928
||||||||||||||||||||||||||||||||
Sbjct: 897 ttattgtaatcattttacaataaaaataataa 928


Score = 32.2 bits (16), Expect = 1.4
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 902 gtaatcattttacaat 917
||||||||||||||||
Sbjct: 280 gtaatcattttacaat 295


Score = 32.2 bits (16), Expect = 1.4
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 280 gtaatcattttacaat 295
||||||||||||||||
Sbjct: 902 gtaatcattttacaat 917


>Contig-U12244-1 (Contig-U12244-1Q) /CSM_Contig/Contig-U12244-1Q.Seq.d
Length = 1460

Score = 38.2 bits (19), Expect = 0.023
Identities = 22/23 (95%)
Strand = Plus / Plus


Query: 424 cagataataataataaaacattt 446
|||||||||||||||||| ||||
Sbjct: 155 cagataataataataaaatattt 177


>Contig-U08275-1 (Contig-U08275-1Q) /CSM_Contig/Contig-U08275-1Q.Seq.d
Length = 508

Score = 38.2 bits (19), Expect = 0.023
Identities = 19/19 (100%)
Strand = Plus / Plus


Query: 569 ttatgaaaatcattatcat 587
|||||||||||||||||||
Sbjct: 222 ttatgaaaatcattatcat 240


Database: CSM
Posted date: Jun 7, 2004 8:33 AM
Number of letters in database: 7,895,291
Number of sequences in database: 8361

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 38,251
Number of Sequences: 8361
Number of extensions: 38251
Number of successful extensions: 12832
Number of sequences better than 10.0: 788
length of query: 928
length of database: 7,895,291
effective HSP length: 16
effective length of query: 912
effective length of database: 7,761,515
effective search space: 7078501680
effective search space used: 7078501680
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 4.24
Homology vs DNA
Query= Contig-U01204-1 (Contig-U01204-1Q) /CSM_Contig/Contig-U01204-1Q.Seq.d
(928 letters)

Database: ddbj_A
102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 632 0.0 6
(AU052404) Dictyostelium discoideum slug cDNA, clone SLD262. 993 0.0 2
(AU052406) Dictyostelium discoideum slug cDNA, clone SLD265. 819 0.0 2
(AU061117) Dictyostelium discoideum slug cDNA, clone SLD265. 297 e-150 3
(AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 36 0.043 8
(BX548032) Zebrafish DNA sequence from clone CH211-145G9 in ... 42 0.048 6
(AL596026) Zebrafish DNA sequence from clone BUSM1-234G15 in... 40 0.100 5
(CR382399) Plasmodium falciparum chromosome 6, complete sequ... 36 0.13 9
(CU914794) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.15 1
(CT353523) Sus scrofa genomic clone CH242-465A7, genomic sur... 50 0.15 1
(CR759822) Zebrafish DNA sequence from clone DKEYP-122A9 in ... 42 0.17 6
(AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s... 38 0.18 12
(BX649367) Zebrafish DNA sequence from clone CH211-133F22 in... 40 0.23 7
(EC993492) WIN1148.C21_I20 Muscat Hamburg pre-veraison berry... 36 0.44 2
(EC993050) WIN1147.C21_D22 Muscat Hamburg pre-veraison berry... 36 0.44 2
(BX324186) Zebrafish DNA sequence from clone DKEY-18B8 in li... 40 0.57 5
(BX677664) Zebrafish DNA sequence from clone DKEYP-122B11 in... 40 0.57 6
(X99256) Hylobates lar complete mitochondrial DNA sequence. 42 0.58 2
(CU076079) Zebrafish DNA sequence from clone CH73-66H23 in l... 48 0.61 1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 48 0.61 1
(CT030040) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.61 1
(FI075652) CHO_OF7352xf07r1.ab1 CHO_OF7 Nicotiana tabacum ge... 48 0.61 1
(DT718392) rscag0_006942 Zhikong scallop Chlamys farreri cha... 48 0.61 1
(CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 36 0.85 12
(AX345104) Sequence 175 from Patent WO0200928. 38 1.2 3
(AC225298) Monodelphis domestica clone VMRC18-940P17, WORKIN... 38 1.2 3
(AL035476) Plasmodium falciparum MAL4P3. 44 1.4 10
(AC115683) Dictyostelium discoideum chromosome 2 map complem... 32 1.5 6
(AC019835) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 44 1.6 3
(DU950004) 215018 Tomato MboI BAC Library Solanum lycopersic... 36 1.6 2
(FH388405) CHO_OF4768xg10f1.ab1 CHO_OF4 Nicotiana tabacum ge... 40 1.9 2
(ET856832) CHO_OF147xk24f1.ab1 CHO_OF Nicotiana tabacum geno... 40 1.9 2
(BX005083) Zebrafish DNA sequence from clone CH211-220F13 in... 44 2.1 3
(AC146294) Danio rerio clone CH211-51I11, WORKING DRAFT SEQU... 34 2.1 6
(CU681852) Zebrafish DNA sequence from clone CH211-214P17 in... 46 2.4 1
(CU463790) Zebrafish DNA sequence from clone DKEY-262K9 in l... 46 2.4 1
(BX649451) Zebrafish DNA sequence from clone DKEY-206M7 in l... 46 2.4 1
(AJ851775) Gallus gallus mRNA for hypothetical protein, clon... 46 2.4 1
(BX813336) Mouse DNA sequence from clone RP23-207B5 on chrom... 46 2.4 1
(AL662858) Mouse DNA sequence from clone RP23-166O21 on chro... 46 2.4 1
(AC145559) Mus musculus BAC clone RP23-371A1 from 5, complet... 46 2.4 1
(AC142098) Mus musculus BAC clone RP24-458F14 from chromosom... 46 2.4 1
(AC134563) Mus musculus BAC clone RP24-179M18 from chromosom... 46 2.4 1
(AC129080) Mus musculus BAC clone RP24-226L20 from chromosom... 46 2.4 1
(AC188304) Pongo abelii chromosome UNK clone CH276-1H12, com... 46 2.4 1
(AM475100) Vitis vinifera contig VV78X098271.4, whole genome... 46 2.4 1
(AM466445) Vitis vinifera contig VV78X085544.22, whole genom... 46 2.4 1
(AM458692) Vitis vinifera, whole genome shotgun sequence, co... 46 2.4 1
(AM447533) Vitis vinifera contig VV78X054009.2, whole genome... 46 2.4 1
(AM445922) Vitis vinifera contig VV78X252221.4, whole genome... 46 2.4 1
(EA427602) Sequence 77 from patent US 7332281. 46 2.4 1
(DL007621) NOVEL THERAPEUTIC TARGETS IN CANCER. 46 2.4 1
(AC091051) Homo sapiens chromosome 11, clone RP11-423H12, co... 46 2.4 1
(AC064865) Homo sapiens BAC clone RP11-436E1 from 2, complet... 46 2.4 1
(AC015771) Homo sapiens, clone RP11-2F20, complete sequence. 46 2.4 1
(AC149743) Bos taurus clone CH240-24G18, WORKING DRAFT SEQUE... 46 2.4 1
(AC149697) Bos taurus clone CH240-407D1, WORKING DRAFT SEQUE... 46 2.4 1
(AC134976) Homo sapiens chromosome 18 clone RP11-42J14 map 1... 46 2.4 1
(AC128145) Rattus norvegicus clone CH230-386I6, WORKING DRAF... 46 2.4 1
(CU928018) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 2.4 1
(BX842569) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 46 2.4 1
(AC189557) Brassica rapa subsp. pekinensis clone KBrH006P22,... 46 2.4 1
(AC023433) Homo sapiens clone RP11-114K22, WORKING DRAFT SEQ... 46 2.4 1
(AC015772) Homo sapiens chromosome 11 clone RP11-2F21 map 11... 46 2.4 1
(BH083185) RPCI-24-338H22.TV RPCI-24 Mus musculus genomic cl... 46 2.4 1
(ET807453) CHO_OF881xb09r1.ab1 CHO_OF Nicotiana tabacum geno... 46 2.4 1
(ET739198) CHO_OF237xd20r1.ab1 CHO_OF Nicotiana tabacum geno... 46 2.4 1
(AM564325) Paracentrotus lividus EST, clone MPMGp1173N05102Q... 46 2.4 1
(AJ727039) Gallus gallus EST, clone 30a20s4. 46 2.4 1
(AJ727031) Gallus gallus EST, clone 30a20r5. 46 2.4 1
(AJ394232) Gallus gallus EST clone 18i21r1. 46 2.4 1
(FK205294) XABT214211.b1 Gateway compatible cien cDNA librar... 46 2.4 1
(FK183593) XABT200695.g1 Gateway compatible cien cDNA librar... 46 2.4 1
(FK183592) XABT200695.b1 Gateway compatible cien cDNA librar... 46 2.4 1
(FK171082) XABT193042.b1 Gateway compatible cien cDNA librar... 46 2.4 1
(FK095387) XABT145607.g1 Gateway compatible cien cDNA librar... 46 2.4 1
(FK095386) XABT145607.b1 Gateway compatible cien cDNA librar... 46 2.4 1
(FK084883) XABT139178.b1 Gateway compatible cien cDNA librar... 46 2.4 1
(EX634048) 256593196 Pea aphid whole body normalized full le... 46 2.4 1
(AM437086) Vitis vinifera, whole genome shotgun sequence, co... 36 2.9 4
(EJ093242) 1095460221609 Global-Ocean-Sampling_GS-26-01-01-1... 34 3.0 3
(AM426331) Vitis vinifera contig VV78X156329.2, whole genome... 32 3.2 4
(EF383185) Statilia maculata isolate MN062 12S ribosomal RNA... 40 3.4 2
(BX649400) Zebrafish DNA sequence from clone CH211-282J22 in... 38 3.5 6
(BX248743) Zebrafish DNA sequence from clone CH211-202P11. 36 3.6 4
(FE167812) LV_LO_RA045J10f Litopenaeus vannamei lymphoid org... 32 3.9 3
(AC090351) Homo sapiens chromosome 18 clone RP11-715J4 map 1... 36 4.6 4
(CU074329) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 5.0 5
(AC069411) Homo sapiens 3 BAC RP11-609K13 (Roswell Park Canc... 36 5.3 7
(AC117432) Homo sapiens 3 BAC RP11-80F7 (Roswell Park Cancer... 38 5.5 5
(CU467766) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 5.6 3
(FC602693) CAXS14249.rev CAXS Lottia gigantea from head, foo... 42 5.9 2
(EJ028420) 1095454032990 Global-Ocean-Sampling_GS-26-01-01-1... 40 6.1 2
(FC598159) CAXS11283.fwd CAXS Lottia gigantea from head, foo... 42 6.1 2
(FC598158) CAXS11283.rev CAXS Lottia gigantea from head, foo... 42 6.1 2
(AG446251) Mus musculus molossinus DNA, clone:MSMg01-329G12.... 34 6.1 2
(CU942355) Brassica napus GSS, clone JBnB122O22, end read, p... 30 6.3 3
(AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 36 6.4 5
(DJ386697) Diagnosis of Diseases Associated with Metastasis. 32 6.6 5
(AX348857) Sequence 315 from Patent WO0202807. 32 6.6 5
(AX281493) Sequence 157 from Patent WO0177376. 32 6.6 5
(FC569769) CAWF8557.rev CAWF Lottia gigantea from mantle (H)... 42 6.7 2
(FC606332) CAXS2640.fwd CAXS Lottia gigantea from head, foot... 42 6.7 2
(EJ942593) 1093018895715 Global-Ocean-Sampling_GS-30-02-01-1... 40 6.8 2
(AC181787) Strongylocentrotus purpuratus clone R3-1030C18, W... 38 6.8 3
(FC608902) CAXS4170.rev CAXS Lottia gigantea from head, foot... 42 6.9 2
(DT612065) ACAG-aab12d10.g1 Hydra_EST_UCI-9 Hydra magnipapil... 30 6.9 3
(EX653700) 256822281 Pea aphid whole body normalized full le... 32 7.0 3
(BX215764) Danio rerio genomic clone DKEY-267G13, genomic su... 42 7.1 2
(BX147250) Danio rerio genomic clone DKEY-106O18, genomic su... 42 7.3 2
(FK858696) 000004952973B01 D. serrata mRNA from different de... 42 7.5 2
(CR847527) Zebrafish DNA sequence from clone DKEY-30O15 in l... 32 7.7 6
(CU013549) Zebrafish DNA sequence from clone DKEY-262J19 in ... 40 8.2 3
(FE151282) LV_LO_RA009M23f Litopenaeus vannamei lymphoid org... 32 8.3 3
(AR546849) Sequence 1980 from patent US 6747137. 40 8.5 2
(AC093101) Drosophila melanogaster, chromosome 2L, region 35... 44 8.6 4
(CU941750) Brassica napus GSS, clone JBnB122B15, end read, p... 30 8.7 3
(FE177803) LV_NC_RA17O08r Litopenaeus vannamei nerve cord cD... 32 9.2 3
(CR392032) Zebrafish DNA sequence from clone DKEYP-64A3 in l... 44 9.5 1
(CR391912) Zebrafish DNA sequence from clone CH211-254P10 in... 44 9.5 1
(CR388021) Zebrafish DNA sequence from clone CH211-189L17 in... 44 9.5 1
(BX571842) Zebrafish DNA sequence from clone CH211-191A24 in... 44 9.5 1
(BX511149) Zebrafish DNA sequence from clone DKEYP-14G8 in l... 44 9.5 1
(AL732577) Zebrafish DNA sequence from clone RP71-1M10 in li... 44 9.5 1
(CT009512) Mouse DNA sequence from clone RP23-94B13 on chrom... 44 9.5 1
(AC116591) Mus musculus BAC clone RP24-90K1 from chromosome ... 44 9.5 1
(EF036569) Amphidinium operculatum cytochrome oxidase subuni... 44 9.5 1
(CU896548) M.truncatula DNA sequence from clone MTH2-36A5 on... 44 9.5 1
(AM449677) Vitis vinifera contig VV78X150189.9, whole genome... 44 9.5 1
(AC208140) Populus trichocarpa clone JGIACSB13-H15, complete... 44 9.5 1
(GM674887) Sequence 10 from Patent WO2008081039. 44 9.5 1
(AB258797) Bos taurus NNT gene, INT276 locus sequence. 44 9.5 1
(AE014134) Drosophila melanogaster chromosome 2L, complete s... 44 9.5 1
(AB292107) Sypnoides hercules mitochondrial ND5 gene for NAD... 44 9.5 1
(AB292099) Catocala actaea mitochondrial ND5 gene for NADH d... 44 9.5 1
(AB292083) Catocala jonasii mitochondrial ND5 gene for NADH ... 44 9.5 1
(AB291938) Catocala actaea mitochondrial ND5 gene for NADH d... 44 9.5 1
(AB291921) Catocala patala mitochondrial ND5 gene for NADH d... 44 9.5 1
(AB291920) Catocala patala mitochondrial ND5 gene for NADH d... 44 9.5 1
(Z84475) Human DNA sequence from clone RP1-162C6 on chromoso... 44 9.5 1
(AC019129) Homo sapiens BAC clone RP11-559M23 from 2, comple... 44 9.5 1
(AC159153) Otolemur garnettii clone CH256-458N20, WORKING DR... 44 9.5 1
(AC148894) Otolemur garnettii clone CH256-355A3, WORKING DRA... 44 9.5 1
(AC148843) Otolemur garnettii clone CH256-181M8, WORKING DRA... 44 9.5 1
(AC134163) Rattus norvegicus clone CH230-118E17, *** SEQUENC... 44 9.5 1
(AC130084) Rattus norvegicus clone CH230-35P7, WORKING DRAFT... 44 9.5 1
(AC127614) Rattus norvegicus clone CH230-25E2, WORKING DRAFT... 44 9.5 1
(FP102805) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 9.5 1
(CU862019) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 9.5 1
(CT027610) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 9.5 1
(AC234011) Gallus gallus clone CH261-116M12, WORKING DRAFT S... 44 9.5 1
(AC230022) Zea mays chromosome 8 clone CH201-259L12; ZMMBBc0... 44 9.5 1
(AC199576) Zea mays chromosome 8 clone CH201-133N18; ZMMBBc0... 44 9.5 1
(AC182139) Bos taurus clone CH240-331F14, WORKING DRAFT SEQU... 44 9.5 1
(AC178391) Strongylocentrotus purpuratus clone R3-3107P8, WO... 44 9.5 1
(AC172239) Bos taurus clone CH240-160K4, WORKING DRAFT SEQUE... 44 9.5 1
(AC172000) Bos taurus clone CH240-263P8, WORKING DRAFT SEQUE... 44 9.5 1
(AK042374) Mus musculus 3 days neonate thymus cDNA, RIKEN fu... 44 9.5 1
(BH469424) BOHAQ77TR BOHA Brassica oleracea genomic clone BO... 44 9.5 1
(FH298463) CHO_OF4235xb16r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 9.5 1
(ET761413) CHO_OF081xe24f1.ab1 CHO_OF Nicotiana tabacum geno... 44 9.5 1
(ER994964) ZMMBHn0002F23.f ZMMBHn Zea mays genomic clone ZMM... 44 9.5 1
(EK430594) 1095516148402 Global-Ocean-Sampling_GS-31-01-01-1... 44 9.5 1
(EJ881673) 1093018399114 Global-Ocean-Sampling_GS-30-02-01-1... 44 9.5 1
(EJ710760) 1092956073770 Global-Ocean-Sampling_GS-30-02-01-1... 44 9.5 1
(EJ709180) 1092956067110 Global-Ocean-Sampling_GS-30-02-01-1... 44 9.5 1
(EJ284360) 1095368009353 Global-Ocean-Sampling_GS-27-01-01-1... 44 9.5 1
(DX979583) SBA007_F15.f Sugar beet BAC library USH20 (Code S... 44 9.5 1
(DX481500) Cpl23158 Papaya Genomic DNA BAC Library Carica pa... 44 9.5 1
(DU866399) 83414 Tomato HindIII BAC Library Solanum lycopers... 44 9.5 1
(DU512010) 1098609951690 CHORI-243 Ovis aries genomic clone ... 44 9.5 1
(DU027159) 7872 Tomato HindIII BAC Library Solanum lycopersi... 44 9.5 1
(DH617765) Rattus norvegicus DNA, BAC clone: RNB1-149H12, 5'... 44 9.5 1
(CZ537552) SRAA-aad13h11.g1 Strongyloides ratti whole genome... 44 9.5 1
(CW227539) 104_667_11205860_116_37242_080 Sorghum methylatio... 44 9.5 1
(CT116615) Sus scrofa genomic clone PigE-131L10, genomic sur... 44 9.5 1
(CR968110) mth4-35B9RM1 BAC end, cultivar Jemalong A17 of Me... 44 9.5 1
(CG367865) OGWIH70TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 44 9.5 1
(CE682542) tigr-gss-dog-17000329540019 Dog Library Canis lup... 44 9.5 1
(FF329901) 280441797 Pea aphid whole body normalized full le... 44 9.5 1
(FF320787) 280408409 Pea aphid whole body normalized full le... 44 9.5 1
(EX901068) RS2CS65JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ... 44 9.5 1
(EV250515) EST_cclu_evb_461498 ccluevb mixed_tissue Coregonu... 44 9.5 1
(CP001186) Bacillus cereus G9842, complete genome. 44 9.5 1
(BX323587) Zebrafish DNA sequence from clone CH211-100L3. 40 9.8 2
(FE108981) LV_HC_RA014C21f Litopenaeus vannamei hemocyte cDN... 32 9.9 3

>(AC117176) Dictyostelium discoideum chromosome 2 map 5018074-5200947
strain AX4, complete sequence.
Length = 182871

Score = 632 bits (319), Expect(6) = 0.0
Identities = 319/319 (100%)
Strand = Plus / Minus


Query: 320 acaacattctcatacgattggtaatgaaaccattatcatcgttatggatagttgggtagt 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78338 acaacattctcatacgattggtaatgaaaccattatcatcgttatggatagttgggtagt 78279


Query: 380 tgatcaaattcctgatcaagtgtcttggatggaacaagtattatcagataataataataa 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78278 tgatcaaattcctgatcaagtgtcttggatggaacaagtattatcagataataataataa 78219


Query: 440 aacatttaaatttgctctatatcatatcgccctctatccatgcactaaaatttcaatgga 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78218 aacatttaaatttgctctatatcatatcgccctctatccatgcactaaaatttcaatgga 78159


Query: 500 tgttgaaatctcttctttagcaaaagaattttggggtccagtttttgataaatataattt 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78158 tgttgaaatctcttctttagcaaaagaattttggggtccagtttttgataaatataattt 78099


Query: 560 aactgttggttatgaaaatcattatcatttatataaacgttcaaaacaattagttaatgg 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78098 aactgttggttatgaaaatcattatcatttatataaacgttcaaaacaattagttaatgg 78039


Query: 620 cttggaacatccaaatggt 638
|||||||||||||||||||
Sbjct: 78038 cttggaacatccaaatggt 78020

Score = 361 bits (182), Expect(6) = 0.0
Identities = 182/182 (100%)
Strand = Plus / Minus


Query: 639 acattatatattggtgatggatcatggggtgttgaaactacaatgaaattaagagattat 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77928 acattatatattggtgatggatcatggggtgttgaaactacaatgaaattaagagattat 77869


Query: 699 gattatttagaagtttatggtcgtattcaacatgttattcattcaatggtaaattctcac 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77868 gattatttagaagtttatggtcgtattcaacatgttattcattcaatggtaaattctcac 77809


Query: 759 aattcaactgttaatatcgaaacaataaacattgataatgagattttcgattcttgggaa 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77808 aattcaactgttaatatcgaaacaataaacattgataatgagattttcgattcttgggaa 77749


Query: 819 ag 820
||
Sbjct: 77748 ag 77747

Score = 297 bits (150), Expect(6) = 0.0
Identities = 150/150 (100%)
Strand = Plus / Minus


Query: 160 gatggtgctagatatggtggatatttagcatgggaagtattttgggtgggtactccatta 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79562 gatggtgctagatatggtggatatttagcatgggaagtattttgggtgggtactccatta 79503


Query: 220 tttgtattaatggcatcagcattcaatcaaattcattgggcattggcatgggtattaatg 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79502 tttgtattaatggcatcagcattcaatcaaattcattgggcattggcatgggtattaatg 79443


Query: 280 gtaatcattttacaatctggttttatgaat 309
||||||||||||||||||||||||||||||
Sbjct: 79442 gtaatcattttacaatctggttttatgaat 79413

Score = 184 bits (93), Expect(6) = 0.0
Identities = 93/93 (100%)
Strand = Plus / Minus


Query: 60 agcatcattaggaatatgtttagcaataatagtagcagttatgattggattctttttata 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79662 agcatcattaggaatatgtttagcaataatagtagcagttatgattggattctttttata 79603


Query: 120 tggatttattaaatatgtaaagagaggattatc 152
|||||||||||||||||||||||||||||||||
Sbjct: 79602 tggatttattaaatatgtaaagagaggattatc 79570

Score = 101 bits (51), Expect(6) = 0.0
Identities = 51/51 (100%)
Strand = Plus / Minus


Query: 1 caaaaatcaaaaatgtcagctacatttaatgatatttcatttagacattta 51
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79721 caaaaatcaaaaatgtcagctacatttaatgatatttcatttagacattta 79671

Score = 61.9 bits (31), Expect(6) = 0.0
Identities = 31/31 (100%)
Strand = Plus / Minus


Query: 898 tattgtaatcattttacaataaaaataataa 928
|||||||||||||||||||||||||||||||
Sbjct: 77669 tattgtaatcattttacaataaaaataataa 77639

Score = 32.2 bits (16), Expect(7) = 1.2
Identities = 16/16 (100%)
Strand = Plus / Plus


Query: 79 ttagcaataatagtag 94
||||||||||||||||
Sbjct: 101337 ttagcaataatagtag 101352

Score = 32.2 bits (16), Expect(7) = 1.2
Identities = 19/20 (95%)
Strand = Plus / Plus


Query: 419 attatcagataataataata 438
||||||| ||||||||||||
Sbjct: 130388 attatcatataataataata 130407

Score = 30.2 bits (15), Expect(7) = 1.2
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 134 atgtaaagagaggat 148
|||||||||||||||
Sbjct: 119888 atgtaaagagaggat 119902

Score = 30.2 bits (15), Expect(7) = 1.2
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 547 ataaatataatttaa 561
|||||||||||||||
Sbjct: 133590 ataaatataatttaa 133604

Score = 30.2 bits (15), Expect(7) = 1.2
Identities = 15/15 (100%)
Strand = Plus / Plus


Query: 914 caataaaaataataa 928
|||||||||||||||
Sbjct: 179574 caataaaaataataa 179588

Score = 28.2 bits (14), Expect(7) = 1.2
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 2 aaaaatcaaaaatg 15
||||||||||||||
Sbjct: 9330 aaaaatcaaaaatg 9343

Score = 28.2 bits (14), Expect(7) = 1.2
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 631 caaatggtacatta 644
||||||||||||||
Sbjct: 154873 caaatggtacatta 154886

Score = 34.2 bits (17), Expect(5) = 9.6
Identities = 20/21 (95%)
Strand = Plus / Minus


Query: 541 tttttgataaatataatttaa 561
|||||||||||||||| ||||
Sbjct: 146664 tttttgataaatataaattaa 146644

Score = 32.2 bits (16), Expect(5) = 9.6
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 902 gtaatcattttacaat 917
||||||||||||||||
Sbjct: 79442 gtaatcattttacaat 79427

Score = 32.2 bits (16), Expect(5) = 9.6
Identities = 16/16 (100%)
Strand = Plus / Minus


Query: 648 attggtgatggatcat 663
||||||||||||||||
Sbjct: 144129 attggtgatggatcat 144114

Score = 30.2 bits (15), Expect(5) = 9.6
Identities = 18/19 (94%)
Strand = Plus / Minus


Query: 427 ataataataataaaacatt 445
||||||||||||| |||||
Sbjct: 161519 ataataataataatacatt 161501

Score = 28.2 bits (14), Expect(5) = 9.6
Identities = 14/14 (100%)
Strand = Plus / Minus


Query: 915 aataaaaataataa 928
||||||||||||||
Sbjct: 15581 aataaaaataataa 15568

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 1,094,584,214
Number of extensions: 74969121
Number of successful extensions: 8972648
Number of sequences better than 10.0: 188
Length of query: 928
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 904
Effective length of database: 99,340,224,878
Effective search space: 89803563289712
Effective search space used: 89803563289712
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)

protein update 2009. 7.14
Homology vs Protein
Query= Contig-U01204-1 (Contig-U01204-1Q) /CSM_Contig/Contig-U01204-1Q.Seq.d
(928 letters)

Database: nrp_B
3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC117176_40(AC117176|pid:none) Dictyostelium discoideum chromoso... 353 5e-96
AE001437_200(AE001437|pid:none) Clostridium acetobutylicum ATCC ... 50 1e-04
BX294155_95(BX294155|pid:none) Rhodopirellula baltica SH 1 compl... 49 2e-04
CP000155_3485(CP000155|pid:none) Hahella chejuensis KCTC 2396, c... 48 4e-04
CP001087_1328(CP001087|pid:none) Desulfobacterium autotrophicum ... 48 5e-04
CP000721_3666(CP000721|pid:none) Clostridium beijerinckii NCIMB ... 42 0.023
AP009049_1578(AP009049|pid:none) Clostridium kluyveri NBRC 12016... 42 0.039
AF448725_1(AF448725|pid:none) Arabidopsis thaliana putative purp... 40 0.11
(Q9LJU7) RecName: Full=Purple acid phosphatase 18; EC=3... 40 0.11
CP000769_3797(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 40 0.11
CP000448_1928(CP000448|pid:none) Syntrophomonas wolfei subsp. wo... 39 0.25
CP000961_4572(CP000961|pid:none) Shewanella woodyi ATCC 51908, c... 39 0.33
CP001145_168(CP001145|pid:none) Coprothermobacter proteolyticus ... 38 0.43
AY878355_1(AY878355|pid:none) Medicago truncatula phytase mRNA, ... 38 0.43
CP000232_1133(CP000232|pid:none) Moorella thermoacetica ATCC 390... 38 0.43
CP000023_581(CP000023|pid:none) Streptococcus thermophilus LMG 1... 38 0.43
CR382133_29(CR382133|pid:none) Debaryomyces hansenii strain CBS7... 38 0.56
CP000473_3516(CP000473|pid:none) Solibacter usitatus Ellin6076, ... 38 0.56
AF030694_13(AF030694|pid:none) Plasmodium falciparum strain Dd2 ... 37 0.73
CT573213_3871(CT573213|pid:none) Frankia alni str. ACN14A chromo... 37 0.73
CP000559_1019(CP000559|pid:none) Methanocorpusculum labreanum Z,... 37 0.95
BA000028_802(BA000028|pid:none) Oceanobacillus iheyensis HTE831 ... 37 1.2
CP000916_913(CP000916|pid:none) Thermotoga neapolitana DSM 4359,... 36 1.6
CR382128_828(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 36 1.6
CP000769_3342(CP000769|pid:none) Anaeromyxobacter sp. Fw109-5, c... 35 2.8
(Q6R4Q5) RecName: Full=Sodium/glucose cotransporter 5; AltName: ... 35 2.8
CP000095_482(CP000095|pid:none) Prochlorococcus marinus str. NAT... 35 2.8
AP006618_4839(AP006618|pid:none) Nocardia farcinica IFM 10152 DN... 35 3.6
FJ973998_1(FJ973998|pid:none) Triticum aestivum purple acid phos... 35 4.7
AY598342_1(AY598342|pid:none) Solanum tuberosum purple acid phos... 34 6.2
CT978603_672(CT978603|pid:none) Synechococcus sp. RCC307 genomic... 34 6.2
AM443153_1(AM443153|pid:none) Vitis vinifera contig VV78X232680.... 34 8.0
BT033538_1(BT033538|pid:none) Zea mays full-length cDNA clone ZM... 34 8.0
FJ974008_1(FJ974008|pid:none) Zea mays chloroplast purple acid p... 34 8.0
FJ974004_1(FJ974004|pid:none) Hordeum vulgare purple acid phosph... 34 8.0
FM991878_1(FM991878|pid:none) Toona witches'-broom phytoplasma s... 34 8.0
CP000609_237(CP000609|pid:none) Methanococcus maripaludis C5, co... 34 8.0
BT084018_1(BT084018|pid:none) Zea mays full-length cDNA clone ZM... 34 8.0
CS490854_1(CS490854|pid:none) Sequence 6 from Patent WO2007006952. 34 8.0
BT061295_1(BT061295|pid:none) Zea mays full-length cDNA clone ZM... 34 8.0
CP000916_66(CP000916|pid:none) Thermotoga neapolitana DSM 4359, ... 34 8.1
(Q9FXH5) RecName: Full=Probable purine permease 14; Sho... 34 8.1

>AC117176_40(AC117176|pid:none) Dictyostelium discoideum chromosome
2 map 5018074-5200947 strain AX4, complete sequence.
Length = 588

Score = 353 bits (906), Expect = 5e-96
Identities = 167/167 (100%), Positives = 167/167 (100%)
Frame = +3

Query: 321 QHSHTIGNETIIIVMDSWVVDQIPDQVSWMEQVLSDNNNKTFKFALYHIALYPCTKISMD 500
QHSHTIGNETIIIVMDSWVVDQIPDQVSWMEQVLSDNNNKTFKFALYHIALYPCTKISMD
Sbjct: 419 QHSHTIGNETIIIVMDSWVVDQIPDQVSWMEQVLSDNNNKTFKFALYHIALYPCTKISMD 478

Query: 501 VEISSLAKEFWGPVFDKYNLTVGYENHYHLYKRSKQLVNGLEHPNGTLYIGDGSWGVETT 680
VEISSLAKEFWGPVFDKYNLTVGYENHYHLYKRSKQLVNGLEHPNGTLYIGDGSWGVETT
Sbjct: 479 VEISSLAKEFWGPVFDKYNLTVGYENHYHLYKRSKQLVNGLEHPNGTLYIGDGSWGVETT 538

Query: 681 MKLRDYDYLEVYGRIQHVIHSMVNSHNSTVNIETINIDNEIFDSWER 821
MKLRDYDYLEVYGRIQHVIHSMVNSHNSTVNIETINIDNEIFDSWER
Sbjct: 539 MKLRDYDYLEVYGRIQHVIHSMVNSHNSTVNIETINIDNEIFDSWER 585

Score = 204 bits (519), Expect = 3e-51
Identities = 99/99 (100%), Positives = 99/99 (100%)
Frame = +1

Query: 13 MSATFNDISFRHLFFLASLGICLAIIVAVMIGFFLYGFIKYVKRGLSKKDGARYGGYLAW 192
MSATFNDISFRHLFFLASLGICLAIIVAVMIGFFLYGFIKYVKRGLSKKDGARYGGYLAW
Sbjct: 1 MSATFNDISFRHLFFLASLGICLAIIVAVMIGFFLYGFIKYVKRGLSKKDGARYGGYLAW 60

Query: 193 EVFWVGTPLFVLMASAFNQIHWALAWVLMVIILQSGFMN 309
EVFWVGTPLFVLMASAFNQIHWALAWVLMVIILQSGFMN
Sbjct: 61 EVFWVGTPLFVLMASAFNQIHWALAWVLMVIILQSGFMN 99

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 1,429,367,728
Number of extensions: 28930751
Number of successful extensions: 75048
Number of sequences better than 10.0: 42
Number of HSP's gapped: 74998
Number of HSP's successfully gapped: 43
Length of query: 309
Length of database: 1,051,180,864
Length adjustment: 128
Effective length of query: 181
Effective length of database: 636,901,312
Effective search space: 115279137472
Effective search space used: 115279137472
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)

PSORT

psg: 0.78 gvh: 0.73 alm: 0.14 top: 0.70 tms: 0.20 mit: 0.22 mip: 0.09
nuc: 0.00 erl: 0.00 erm: 0.20 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 1.00 m_ : 0.00

32.0 %: endoplasmic reticulum
20.0 %: plasma membrane
12.0 %: nuclear
12.0 %: vacuolar
12.0 %: mitochondrial
4.0 %: cytoskeletal
4.0 %: Golgi
4.0 %: cytoplasmic

>> prediction for Contig-U01204-1 is end

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 2
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0