Homology vs CSM-cDNA |
|
Homology vs DNA |
Query= Contig-U01204-1 (Contig-U01204-1Q) /CSM_Contig/Contig-U01204-1Q.Seq.d (928 letters)
Database: ddbj_A 102,105,510 sequences; 101,790,757,118 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value N
(AC117176) Dictyostelium discoideum chromosome 2 map 5018074... 632 0.0 6 (AU052404) Dictyostelium discoideum slug cDNA, clone SLD262. 993 0.0 2 (AU052406) Dictyostelium discoideum slug cDNA, clone SLD265. 819 0.0 2 (AU061117) Dictyostelium discoideum slug cDNA, clone SLD265. 297 e-150 3 (AC116963) Dictyostelium discoideum chromosome 2 map 4657875... 36 0.043 8 (BX548032) Zebrafish DNA sequence from clone CH211-145G9 in ... 42 0.048 6 (AL596026) Zebrafish DNA sequence from clone BUSM1-234G15 in... 40 0.100 5 (CR382399) Plasmodium falciparum chromosome 6, complete sequ... 36 0.13 9 (CU914794) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 50 0.15 1 (CT353523) Sus scrofa genomic clone CH242-465A7, genomic sur... 50 0.15 1 (CR759822) Zebrafish DNA sequence from clone DKEYP-122A9 in ... 42 0.17 6 (AL929357) Plasmodium falciparum strain 3D7, chromosome 9; s... 38 0.18 12 (BX649367) Zebrafish DNA sequence from clone CH211-133F22 in... 40 0.23 7 (EC993492) WIN1148.C21_I20 Muscat Hamburg pre-veraison berry... 36 0.44 2 (EC993050) WIN1147.C21_D22 Muscat Hamburg pre-veraison berry... 36 0.44 2 (BX324186) Zebrafish DNA sequence from clone DKEY-18B8 in li... 40 0.57 5 (BX677664) Zebrafish DNA sequence from clone DKEYP-122B11 in... 40 0.57 6 (X99256) Hylobates lar complete mitochondrial DNA sequence. 42 0.58 2 (CU076079) Zebrafish DNA sequence from clone CH73-66H23 in l... 48 0.61 1 (AC116957) Dictyostelium discoideum chromosome 2 map 1685067... 48 0.61 1 (CT030040) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 48 0.61 1 (FI075652) CHO_OF7352xf07r1.ab1 CHO_OF7 Nicotiana tabacum ge... 48 0.61 1 (DT718392) rscag0_006942 Zhikong scallop Chlamys farreri cha... 48 0.61 1 (CP000263) Buchnera aphidicola str. Cc (Cinara cedri), compl... 36 0.85 12 (AX345104) Sequence 175 from Patent WO0200928. 38 1.2 3 (AC225298) Monodelphis domestica clone VMRC18-940P17, WORKIN... 38 1.2 3 (AL035476) Plasmodium falciparum MAL4P3. 44 1.4 10 (AC115683) Dictyostelium discoideum chromosome 2 map complem... 32 1.5 6 (AC019835) Drosophila melanogaster, *** SEQUENCING IN PROGRE... 44 1.6 3 (DU950004) 215018 Tomato MboI BAC Library Solanum lycopersic... 36 1.6 2 (FH388405) CHO_OF4768xg10f1.ab1 CHO_OF4 Nicotiana tabacum ge... 40 1.9 2 (ET856832) CHO_OF147xk24f1.ab1 CHO_OF Nicotiana tabacum geno... 40 1.9 2 (BX005083) Zebrafish DNA sequence from clone CH211-220F13 in... 44 2.1 3 (AC146294) Danio rerio clone CH211-51I11, WORKING DRAFT SEQU... 34 2.1 6 (CU681852) Zebrafish DNA sequence from clone CH211-214P17 in... 46 2.4 1 (CU463790) Zebrafish DNA sequence from clone DKEY-262K9 in l... 46 2.4 1 (BX649451) Zebrafish DNA sequence from clone DKEY-206M7 in l... 46 2.4 1 (AJ851775) Gallus gallus mRNA for hypothetical protein, clon... 46 2.4 1 (BX813336) Mouse DNA sequence from clone RP23-207B5 on chrom... 46 2.4 1 (AL662858) Mouse DNA sequence from clone RP23-166O21 on chro... 46 2.4 1 (AC145559) Mus musculus BAC clone RP23-371A1 from 5, complet... 46 2.4 1 (AC142098) Mus musculus BAC clone RP24-458F14 from chromosom... 46 2.4 1 (AC134563) Mus musculus BAC clone RP24-179M18 from chromosom... 46 2.4 1 (AC129080) Mus musculus BAC clone RP24-226L20 from chromosom... 46 2.4 1 (AC188304) Pongo abelii chromosome UNK clone CH276-1H12, com... 46 2.4 1 (AM475100) Vitis vinifera contig VV78X098271.4, whole genome... 46 2.4 1 (AM466445) Vitis vinifera contig VV78X085544.22, whole genom... 46 2.4 1 (AM458692) Vitis vinifera, whole genome shotgun sequence, co... 46 2.4 1 (AM447533) Vitis vinifera contig VV78X054009.2, whole genome... 46 2.4 1 (AM445922) Vitis vinifera contig VV78X252221.4, whole genome... 46 2.4 1 (EA427602) Sequence 77 from patent US 7332281. 46 2.4 1 (DL007621) NOVEL THERAPEUTIC TARGETS IN CANCER. 46 2.4 1 (AC091051) Homo sapiens chromosome 11, clone RP11-423H12, co... 46 2.4 1 (AC064865) Homo sapiens BAC clone RP11-436E1 from 2, complet... 46 2.4 1 (AC015771) Homo sapiens, clone RP11-2F20, complete sequence. 46 2.4 1 (AC149743) Bos taurus clone CH240-24G18, WORKING DRAFT SEQUE... 46 2.4 1 (AC149697) Bos taurus clone CH240-407D1, WORKING DRAFT SEQUE... 46 2.4 1 (AC134976) Homo sapiens chromosome 18 clone RP11-42J14 map 1... 46 2.4 1 (AC128145) Rattus norvegicus clone CH230-386I6, WORKING DRAF... 46 2.4 1 (CU928018) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 46 2.4 1 (BX842569) Mouse DNA sequence *** SEQUENCING CANCELLED *** f... 46 2.4 1 (AC189557) Brassica rapa subsp. pekinensis clone KBrH006P22,... 46 2.4 1 (AC023433) Homo sapiens clone RP11-114K22, WORKING DRAFT SEQ... 46 2.4 1 (AC015772) Homo sapiens chromosome 11 clone RP11-2F21 map 11... 46 2.4 1 (BH083185) RPCI-24-338H22.TV RPCI-24 Mus musculus genomic cl... 46 2.4 1 (ET807453) CHO_OF881xb09r1.ab1 CHO_OF Nicotiana tabacum geno... 46 2.4 1 (ET739198) CHO_OF237xd20r1.ab1 CHO_OF Nicotiana tabacum geno... 46 2.4 1 (AM564325) Paracentrotus lividus EST, clone MPMGp1173N05102Q... 46 2.4 1 (AJ727039) Gallus gallus EST, clone 30a20s4. 46 2.4 1 (AJ727031) Gallus gallus EST, clone 30a20r5. 46 2.4 1 (AJ394232) Gallus gallus EST clone 18i21r1. 46 2.4 1 (FK205294) XABT214211.b1 Gateway compatible cien cDNA librar... 46 2.4 1 (FK183593) XABT200695.g1 Gateway compatible cien cDNA librar... 46 2.4 1 (FK183592) XABT200695.b1 Gateway compatible cien cDNA librar... 46 2.4 1 (FK171082) XABT193042.b1 Gateway compatible cien cDNA librar... 46 2.4 1 (FK095387) XABT145607.g1 Gateway compatible cien cDNA librar... 46 2.4 1 (FK095386) XABT145607.b1 Gateway compatible cien cDNA librar... 46 2.4 1 (FK084883) XABT139178.b1 Gateway compatible cien cDNA librar... 46 2.4 1 (EX634048) 256593196 Pea aphid whole body normalized full le... 46 2.4 1 (AM437086) Vitis vinifera, whole genome shotgun sequence, co... 36 2.9 4 (EJ093242) 1095460221609 Global-Ocean-Sampling_GS-26-01-01-1... 34 3.0 3 (AM426331) Vitis vinifera contig VV78X156329.2, whole genome... 32 3.2 4 (EF383185) Statilia maculata isolate MN062 12S ribosomal RNA... 40 3.4 2 (BX649400) Zebrafish DNA sequence from clone CH211-282J22 in... 38 3.5 6 (BX248743) Zebrafish DNA sequence from clone CH211-202P11. 36 3.6 4 (FE167812) LV_LO_RA045J10f Litopenaeus vannamei lymphoid org... 32 3.9 3 (AC090351) Homo sapiens chromosome 18 clone RP11-715J4 map 1... 36 4.6 4 (CU074329) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 38 5.0 5 (AC069411) Homo sapiens 3 BAC RP11-609K13 (Roswell Park Canc... 36 5.3 7 (AC117432) Homo sapiens 3 BAC RP11-80F7 (Roswell Park Cancer... 38 5.5 5 (CU467766) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 40 5.6 3 (FC602693) CAXS14249.rev CAXS Lottia gigantea from head, foo... 42 5.9 2 (EJ028420) 1095454032990 Global-Ocean-Sampling_GS-26-01-01-1... 40 6.1 2 (FC598159) CAXS11283.fwd CAXS Lottia gigantea from head, foo... 42 6.1 2 (FC598158) CAXS11283.rev CAXS Lottia gigantea from head, foo... 42 6.1 2 (AG446251) Mus musculus molossinus DNA, clone:MSMg01-329G12.... 34 6.1 2 (CU942355) Brassica napus GSS, clone JBnB122O22, end read, p... 30 6.3 3 (AC116979) Dictyostelium discoideum chromosome 2 map 6445720... 36 6.4 5 (DJ386697) Diagnosis of Diseases Associated with Metastasis. 32 6.6 5 (AX348857) Sequence 315 from Patent WO0202807. 32 6.6 5 (AX281493) Sequence 157 from Patent WO0177376. 32 6.6 5 (FC569769) CAWF8557.rev CAWF Lottia gigantea from mantle (H)... 42 6.7 2 (FC606332) CAXS2640.fwd CAXS Lottia gigantea from head, foot... 42 6.7 2 (EJ942593) 1093018895715 Global-Ocean-Sampling_GS-30-02-01-1... 40 6.8 2 (AC181787) Strongylocentrotus purpuratus clone R3-1030C18, W... 38 6.8 3 (FC608902) CAXS4170.rev CAXS Lottia gigantea from head, foot... 42 6.9 2 (DT612065) ACAG-aab12d10.g1 Hydra_EST_UCI-9 Hydra magnipapil... 30 6.9 3 (EX653700) 256822281 Pea aphid whole body normalized full le... 32 7.0 3 (BX215764) Danio rerio genomic clone DKEY-267G13, genomic su... 42 7.1 2 (BX147250) Danio rerio genomic clone DKEY-106O18, genomic su... 42 7.3 2 (FK858696) 000004952973B01 D. serrata mRNA from different de... 42 7.5 2 (CR847527) Zebrafish DNA sequence from clone DKEY-30O15 in l... 32 7.7 6 (CU013549) Zebrafish DNA sequence from clone DKEY-262J19 in ... 40 8.2 3 (FE151282) LV_LO_RA009M23f Litopenaeus vannamei lymphoid org... 32 8.3 3 (AR546849) Sequence 1980 from patent US 6747137. 40 8.5 2 (AC093101) Drosophila melanogaster, chromosome 2L, region 35... 44 8.6 4 (CU941750) Brassica napus GSS, clone JBnB122B15, end read, p... 30 8.7 3 (FE177803) LV_NC_RA17O08r Litopenaeus vannamei nerve cord cD... 32 9.2 3 (CR392032) Zebrafish DNA sequence from clone DKEYP-64A3 in l... 44 9.5 1 (CR391912) Zebrafish DNA sequence from clone CH211-254P10 in... 44 9.5 1 (CR388021) Zebrafish DNA sequence from clone CH211-189L17 in... 44 9.5 1 (BX571842) Zebrafish DNA sequence from clone CH211-191A24 in... 44 9.5 1 (BX511149) Zebrafish DNA sequence from clone DKEYP-14G8 in l... 44 9.5 1 (AL732577) Zebrafish DNA sequence from clone RP71-1M10 in li... 44 9.5 1 (CT009512) Mouse DNA sequence from clone RP23-94B13 on chrom... 44 9.5 1 (AC116591) Mus musculus BAC clone RP24-90K1 from chromosome ... 44 9.5 1 (EF036569) Amphidinium operculatum cytochrome oxidase subuni... 44 9.5 1 (CU896548) M.truncatula DNA sequence from clone MTH2-36A5 on... 44 9.5 1 (AM449677) Vitis vinifera contig VV78X150189.9, whole genome... 44 9.5 1 (AC208140) Populus trichocarpa clone JGIACSB13-H15, complete... 44 9.5 1 (GM674887) Sequence 10 from Patent WO2008081039. 44 9.5 1 (AB258797) Bos taurus NNT gene, INT276 locus sequence. 44 9.5 1 (AE014134) Drosophila melanogaster chromosome 2L, complete s... 44 9.5 1 (AB292107) Sypnoides hercules mitochondrial ND5 gene for NAD... 44 9.5 1 (AB292099) Catocala actaea mitochondrial ND5 gene for NADH d... 44 9.5 1 (AB292083) Catocala jonasii mitochondrial ND5 gene for NADH ... 44 9.5 1 (AB291938) Catocala actaea mitochondrial ND5 gene for NADH d... 44 9.5 1 (AB291921) Catocala patala mitochondrial ND5 gene for NADH d... 44 9.5 1 (AB291920) Catocala patala mitochondrial ND5 gene for NADH d... 44 9.5 1 (Z84475) Human DNA sequence from clone RP1-162C6 on chromoso... 44 9.5 1 (AC019129) Homo sapiens BAC clone RP11-559M23 from 2, comple... 44 9.5 1 (AC159153) Otolemur garnettii clone CH256-458N20, WORKING DR... 44 9.5 1 (AC148894) Otolemur garnettii clone CH256-355A3, WORKING DRA... 44 9.5 1 (AC148843) Otolemur garnettii clone CH256-181M8, WORKING DRA... 44 9.5 1 (AC134163) Rattus norvegicus clone CH230-118E17, *** SEQUENC... 44 9.5 1 (AC130084) Rattus norvegicus clone CH230-35P7, WORKING DRAFT... 44 9.5 1 (AC127614) Rattus norvegicus clone CH230-25E2, WORKING DRAFT... 44 9.5 1 (FP102805) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 9.5 1 (CU862019) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 9.5 1 (CT027610) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 44 9.5 1 (AC234011) Gallus gallus clone CH261-116M12, WORKING DRAFT S... 44 9.5 1 (AC230022) Zea mays chromosome 8 clone CH201-259L12; ZMMBBc0... 44 9.5 1 (AC199576) Zea mays chromosome 8 clone CH201-133N18; ZMMBBc0... 44 9.5 1 (AC182139) Bos taurus clone CH240-331F14, WORKING DRAFT SEQU... 44 9.5 1 (AC178391) Strongylocentrotus purpuratus clone R3-3107P8, WO... 44 9.5 1 (AC172239) Bos taurus clone CH240-160K4, WORKING DRAFT SEQUE... 44 9.5 1 (AC172000) Bos taurus clone CH240-263P8, WORKING DRAFT SEQUE... 44 9.5 1 (AK042374) Mus musculus 3 days neonate thymus cDNA, RIKEN fu... 44 9.5 1 (BH469424) BOHAQ77TR BOHA Brassica oleracea genomic clone BO... 44 9.5 1 (FH298463) CHO_OF4235xb16r1.ab1 CHO_OF4 Nicotiana tabacum ge... 44 9.5 1 (ET761413) CHO_OF081xe24f1.ab1 CHO_OF Nicotiana tabacum geno... 44 9.5 1 (ER994964) ZMMBHn0002F23.f ZMMBHn Zea mays genomic clone ZMM... 44 9.5 1 (EK430594) 1095516148402 Global-Ocean-Sampling_GS-31-01-01-1... 44 9.5 1 (EJ881673) 1093018399114 Global-Ocean-Sampling_GS-30-02-01-1... 44 9.5 1 (EJ710760) 1092956073770 Global-Ocean-Sampling_GS-30-02-01-1... 44 9.5 1 (EJ709180) 1092956067110 Global-Ocean-Sampling_GS-30-02-01-1... 44 9.5 1 (EJ284360) 1095368009353 Global-Ocean-Sampling_GS-27-01-01-1... 44 9.5 1 (DX979583) SBA007_F15.f Sugar beet BAC library USH20 (Code S... 44 9.5 1 (DX481500) Cpl23158 Papaya Genomic DNA BAC Library Carica pa... 44 9.5 1 (DU866399) 83414 Tomato HindIII BAC Library Solanum lycopers... 44 9.5 1 (DU512010) 1098609951690 CHORI-243 Ovis aries genomic clone ... 44 9.5 1 (DU027159) 7872 Tomato HindIII BAC Library Solanum lycopersi... 44 9.5 1 (DH617765) Rattus norvegicus DNA, BAC clone: RNB1-149H12, 5'... 44 9.5 1 (CZ537552) SRAA-aad13h11.g1 Strongyloides ratti whole genome... 44 9.5 1 (CW227539) 104_667_11205860_116_37242_080 Sorghum methylatio... 44 9.5 1 (CT116615) Sus scrofa genomic clone PigE-131L10, genomic sur... 44 9.5 1 (CR968110) mth4-35B9RM1 BAC end, cultivar Jemalong A17 of Me... 44 9.5 1 (CG367865) OGWIH70TV ZM_0.7_1.5_KB Zea mays genomic clone ZM... 44 9.5 1 (CE682542) tigr-gss-dog-17000329540019 Dog Library Canis lup... 44 9.5 1 (FF329901) 280441797 Pea aphid whole body normalized full le... 44 9.5 1 (FF320787) 280408409 Pea aphid whole body normalized full le... 44 9.5 1 (EX901068) RS2CS65JQ RS2(RS) Raphanus sativus cDNA 3', mRNA ... 44 9.5 1 (EV250515) EST_cclu_evb_461498 ccluevb mixed_tissue Coregonu... 44 9.5 1 (CP001186) Bacillus cereus G9842, complete genome. 44 9.5 1 (BX323587) Zebrafish DNA sequence from clone CH211-100L3. 40 9.8 2 (FE108981) LV_HC_RA014C21f Litopenaeus vannamei hemocyte cDN... 32 9.9 3
>(AC117176) Dictyostelium discoideum chromosome 2 map 5018074-5200947 strain AX4, complete sequence. Length = 182871
Score = 632 bits (319), Expect(6) = 0.0 Identities = 319/319 (100%) Strand = Plus / Minus
Query: 320 acaacattctcatacgattggtaatgaaaccattatcatcgttatggatagttgggtagt 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78338 acaacattctcatacgattggtaatgaaaccattatcatcgttatggatagttgggtagt 78279
Query: 380 tgatcaaattcctgatcaagtgtcttggatggaacaagtattatcagataataataataa 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78278 tgatcaaattcctgatcaagtgtcttggatggaacaagtattatcagataataataataa 78219
Query: 440 aacatttaaatttgctctatatcatatcgccctctatccatgcactaaaatttcaatgga 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78218 aacatttaaatttgctctatatcatatcgccctctatccatgcactaaaatttcaatgga 78159
Query: 500 tgttgaaatctcttctttagcaaaagaattttggggtccagtttttgataaatataattt 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78158 tgttgaaatctcttctttagcaaaagaattttggggtccagtttttgataaatataattt 78099
Query: 560 aactgttggttatgaaaatcattatcatttatataaacgttcaaaacaattagttaatgg 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78098 aactgttggttatgaaaatcattatcatttatataaacgttcaaaacaattagttaatgg 78039
Query: 620 cttggaacatccaaatggt 638 ||||||||||||||||||| Sbjct: 78038 cttggaacatccaaatggt 78020
Score = 361 bits (182), Expect(6) = 0.0 Identities = 182/182 (100%) Strand = Plus / Minus
Query: 639 acattatatattggtgatggatcatggggtgttgaaactacaatgaaattaagagattat 698 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77928 acattatatattggtgatggatcatggggtgttgaaactacaatgaaattaagagattat 77869
Query: 699 gattatttagaagtttatggtcgtattcaacatgttattcattcaatggtaaattctcac 758 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77868 gattatttagaagtttatggtcgtattcaacatgttattcattcaatggtaaattctcac 77809
Query: 759 aattcaactgttaatatcgaaacaataaacattgataatgagattttcgattcttgggaa 818 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77808 aattcaactgttaatatcgaaacaataaacattgataatgagattttcgattcttgggaa 77749
Query: 819 ag 820 || Sbjct: 77748 ag 77747
Score = 297 bits (150), Expect(6) = 0.0 Identities = 150/150 (100%) Strand = Plus / Minus
Query: 160 gatggtgctagatatggtggatatttagcatgggaagtattttgggtgggtactccatta 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79562 gatggtgctagatatggtggatatttagcatgggaagtattttgggtgggtactccatta 79503
Query: 220 tttgtattaatggcatcagcattcaatcaaattcattgggcattggcatgggtattaatg 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79502 tttgtattaatggcatcagcattcaatcaaattcattgggcattggcatgggtattaatg 79443
Query: 280 gtaatcattttacaatctggttttatgaat 309 |||||||||||||||||||||||||||||| Sbjct: 79442 gtaatcattttacaatctggttttatgaat 79413
Score = 184 bits (93), Expect(6) = 0.0 Identities = 93/93 (100%) Strand = Plus / Minus
Query: 60 agcatcattaggaatatgtttagcaataatagtagcagttatgattggattctttttata 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79662 agcatcattaggaatatgtttagcaataatagtagcagttatgattggattctttttata 79603
Query: 120 tggatttattaaatatgtaaagagaggattatc 152 ||||||||||||||||||||||||||||||||| Sbjct: 79602 tggatttattaaatatgtaaagagaggattatc 79570
Score = 101 bits (51), Expect(6) = 0.0 Identities = 51/51 (100%) Strand = Plus / Minus
Query: 1 caaaaatcaaaaatgtcagctacatttaatgatatttcatttagacattta 51 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79721 caaaaatcaaaaatgtcagctacatttaatgatatttcatttagacattta 79671
Score = 61.9 bits (31), Expect(6) = 0.0 Identities = 31/31 (100%) Strand = Plus / Minus
Query: 898 tattgtaatcattttacaataaaaataataa 928 ||||||||||||||||||||||||||||||| Sbjct: 77669 tattgtaatcattttacaataaaaataataa 77639
Score = 32.2 bits (16), Expect(7) = 1.2 Identities = 16/16 (100%) Strand = Plus / Plus
Query: 79 ttagcaataatagtag 94 |||||||||||||||| Sbjct: 101337 ttagcaataatagtag 101352
Score = 32.2 bits (16), Expect(7) = 1.2 Identities = 19/20 (95%) Strand = Plus / Plus
Query: 419 attatcagataataataata 438 ||||||| |||||||||||| Sbjct: 130388 attatcatataataataata 130407
Score = 30.2 bits (15), Expect(7) = 1.2 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 134 atgtaaagagaggat 148 ||||||||||||||| Sbjct: 119888 atgtaaagagaggat 119902
Score = 30.2 bits (15), Expect(7) = 1.2 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 547 ataaatataatttaa 561 ||||||||||||||| Sbjct: 133590 ataaatataatttaa 133604
Score = 30.2 bits (15), Expect(7) = 1.2 Identities = 15/15 (100%) Strand = Plus / Plus
Query: 914 caataaaaataataa 928 ||||||||||||||| Sbjct: 179574 caataaaaataataa 179588
Score = 28.2 bits (14), Expect(7) = 1.2 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 2 aaaaatcaaaaatg 15 |||||||||||||| Sbjct: 9330 aaaaatcaaaaatg 9343
Score = 28.2 bits (14), Expect(7) = 1.2 Identities = 14/14 (100%) Strand = Plus / Plus
Query: 631 caaatggtacatta 644 |||||||||||||| Sbjct: 154873 caaatggtacatta 154886
Score = 34.2 bits (17), Expect(5) = 9.6 Identities = 20/21 (95%) Strand = Plus / Minus
Query: 541 tttttgataaatataatttaa 561 |||||||||||||||| |||| Sbjct: 146664 tttttgataaatataaattaa 146644
Score = 32.2 bits (16), Expect(5) = 9.6 Identities = 16/16 (100%) Strand = Plus / Minus
Query: 902 gtaatcattttacaat 917 |||||||||||||||| Sbjct: 79442 gtaatcattttacaat 79427
Score = 32.2 bits (16), Expect(5) = 9.6 Identities = 16/16 (100%) Strand = Plus / Minus
Query: 648 attggtgatggatcat 663 |||||||||||||||| Sbjct: 144129 attggtgatggatcat 144114
Score = 30.2 bits (15), Expect(5) = 9.6 Identities = 18/19 (94%) Strand = Plus / Minus
Query: 427 ataataataataaaacatt 445 ||||||||||||| ||||| Sbjct: 161519 ataataataataatacatt 161501
Score = 28.2 bits (14), Expect(5) = 9.6 Identities = 14/14 (100%) Strand = Plus / Minus
Query: 915 aataaaaataataa 928 |||||||||||||| Sbjct: 15581 aataaaaataataa 15568
Lambda K H 1.37 0.711 1.31
Matrix: blastn matrix:1 -3 Number of Sequences: 102105510 Number of Hits to DB: 1,094,584,214 Number of extensions: 74969121 Number of successful extensions: 8972648 Number of sequences better than 10.0: 188 Length of query: 928 Length of database: 101,790,757,118 Length adjustment: 24 Effective length of query: 904 Effective length of database: 99,340,224,878 Effective search space: 89803563289712 Effective search space used: 89803563289712 X1: 11 (21.8 bits) S2: 22 (44.1 bits)
|
Homology vs Protein |
|