Contig-U05629-1
Contig ID Contig-U05629-1
Contig update 2001. 8.30
Contig sequence
>Contig-U05629-1 (Contig-U05629-1Q) /CSM_Contig/Contig-U05629-1Q.Seq.d
CACAAATTGATAAATTAGAGGATATACATTGTTTTGTTAGAGAGAGTAGA
ACTGGTACAGAGAAACCACCACCACCACAATTCATTTCATTTGGTGGTAA
ATCGTCATCTGATTATATTCAAAATAAAGCATCATATTCAGCTCCATTAA
CTTCAAGTGTTAGTAGTAATAGTTTAACGAGTAGTTATAATTCAGCGACA
ACAACACCAACACCAGCACCACGTTCAACTCCAATTAATTTATCTAAAAA
GAAACAAGCAAAAGCATTATATGATTATGTTGGTAGTGATGCTACTGAAT
TGGACTTTTTCGCCGGTGATATAATTACAATTTTAGACGAAGATGAATCT
GGTTGGTTTAGAGGTGAATTGGGTGATAGAATTGGTTTATATCCTTCAAA
TTATTGTGAACCAATTTAAAAAAATAAATAAATAATAGATTATTTTTTAA
AAATTTAAAAAAAAAAAAAAAAAAAAAA

Gap no gap
Contig length 478
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 4190714
End point 4191101
Strand (PLUS/MINUS) PLUS
Number of clones 1
Number of EST 1
Link to clone list U05629
List of clone(s)

est1=SSJ891E,1,479
Translated Amino Acid sequence
QIDKLEDIHCFVRESRTGTEKPPPPQFISFGGKSSSDYIQNKASYSAPLTSSVSSNSLTS
SYNSATTTPTPAPRSTPINLSKKKQAKALYDYVGSDATELDFFAGDIITILDEDESGWFR
GELGDRIGLYPSNYCEPI*knk*iidyflki*kkkkkk


Translated Amino Acid sequence (All Frames)
Frame A:
hklin*riyivllervelvqrnhhhhnsfhlvvnrhliifkikhhiqlh*lqvlvviv*r
vviiqrqqhqhqhhvqlqliylkrnkqkhymimlvvmllnwtfspvi*lqf*tkmnlvgl
evnwvielvyilqiivnqfkkink**iif*kfkkkkkkk


Frame B:
tn**irgytlfc*re*nwyretttttihfiww*ivi*lysk*siifssinfkc****fne
*l*fsdnntntsttfnsn*fi*ketsksii*lcw**cy*iglfrr*ynynfrrr*iwlv*
r*ig**nwfisfkll*tnlkk*innrlffknlkkkkkkk


Frame C:
QIDKLEDIHCFVRESRTGTEKPPPPQFISFGGKSSSDYIQNKASYSAPLTSSVSSNSLTS
SYNSATTTPTPAPRSTPINLSKKKQAKALYDYVGSDATELDFFAGDIITILDEDESGWFR
GELGDRIGLYPSNYCEPI*knk*iidyflki*kkkkkk


own update 2004. 6.10
Homology vs CSM-cDNA
Query= Contig-U05629-1 (Contig-U05629-1Q)
/CSM_Contig/Contig-U05629-1Q.Seq.d
(478 letters)

Database: CSM
6905 sequences; 5,674,871 total letters


Score E
Sequences producing significant alignments: (bits) Value

Contig-U05629-1 (Contig-U05629-1Q) /CSM_Contig/Conti... 862 0.0
Contig-U14784-1 (Contig-U14784-1Q) /CSM_Contig/Conti... 42 5e-04
Contig-U13393-1 (Contig-U13393-1Q) /CSM_Contig/Conti... 40 0.002
Contig-U12500-1 (Contig-U12500-1Q) /CSM_Contig/Conti... 40 0.002
Contig-U12210-1 (Contig-U12210-1Q) /CSM_Contig/Conti... 40 0.002
Contig-U12168-1 (Contig-U12168-1Q) /CSM_Contig/Conti... 40 0.002
Contig-U10957-1 (Contig-U10957-1Q) /CSM_Contig/Conti... 40 0.002
Contig-U14400-1 (Contig-U14400-1Q) /CSM_Contig/Conti... 38 0.008
Contig-U13875-1 (Contig-U13875-1Q) /CSM_Contig/Conti... 38 0.008
Contig-U13301-1 (Contig-U13301-1Q) /CSM_Contig/Conti... 38 0.008

>Contig-U05629-1 (Contig-U05629-1Q) /CSM_Contig/Contig-U05629-1Q.Seq.d
Length = 478

Score = 862 bits (435), Expect = 0.0
Identities = 449/456 (98%)
Strand = Plus / Plus


Query: 1 cacaaattgataaattagaggatatacattgttttgttagagagagtagaactggtacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacaaattgataaattagaggatatacattgttttgttagagagagtagaactggtacag 60


Query: 61 agaaaccaccaccaccacaattcatttcatttggtggtaaatcgtcatctgattatattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaaaccaccaccaccacaattcatttcatttggtggtaaatcgtcatctgattatattc 120


Query: 121 aaaataaagcatcatattcagctccattaacttcaagtgttagtagtaatagtttaacga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaataaagcatcatattcagctccattaacttcaagtgttagtagtaatagtttaacga 180


Query: 181 gtagttataattcagcgacaacaacaccaacaccagcaccacgttcaactccaattaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtagttataattcagcgacaacaacaccaacaccagcaccacgttcaactccaattaatt 240


Query: 241 tatctaaaaagaaacaagcaaaagcattatatgattatgttggtagtgatgctactgaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatctaaaaagaaacaagcaaaagcattatatgattatgttggtagtgatgctactgaat 300


Query: 301 tggactttttcgccggtgatataattacaattttagacgaagatgaatctggttggttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggactttttcgccggtgatataattacaattttagacgaagatgaatctggttggttta 360


Query: 361 gaggtgaattgggtgatagaattggtttatatccttcaaattattgtgaaccaatttnnn 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaggtgaattgggtgatagaattggtttatatccttcaaattattgtgaaccaatttaaa 420


Query: 421 nnnntaaataaataatagattattttttaaaaattt 456
||||||||||||||||||||||||||||||||
Sbjct: 421 aaaataaataaataatagattattttttaaaaattt 456


>Contig-U14784-1 (Contig-U14784-1Q) /CSM_Contig/Contig-U14784-1Q.Seq.d
Length = 522

Score = 42.1 bits (21), Expect = 5e-04
Identities = 21/21 (100%)
Strand = Plus / Plus


Query: 315 ggtgatataattacaatttta 335
|||||||||||||||||||||
Sbjct: 104 ggtgatataattacaatttta 124


>Contig-U13393-1 (Contig-U13393-1Q) /CSM_Contig/Contig-U13393-1Q.Seq.d
Length = 657

Score = 40.1 bits (20), Expect = 0.002
Identities = 23/24 (95%)
Strand = Plus / Plus


Query: 198 acaacaacaccaacaccagcacca 221
|||||||||||||||||| |||||
Sbjct: 74 acaacaacaccaacaccaacacca 97


Score = 32.2 bits (16), Expect = 0.52
Identities = 22/24 (91%)
Strand = Plus / Plus


Query: 198 acaacaacaccaacaccagcacca 221
||||||||||||||| || |||||
Sbjct: 62 acaacaacaccaacaacaacacca 85


Score = 28.2 bits (14), Expect = 8.1
Identities = 14/14 (100%)
Strand = Plus / Plus


Query: 68 accaccaccacaat 81
||||||||||||||
Sbjct: 247 accaccaccacaat 260


Database: CSM
Posted date: Jun 9, 2004 7:35 PM
Number of letters in database: 5,674,871
Number of sequences in database: 6905

Lambda K H
1.37 0.711 1.31

Gapped
Lambda K H
1.37 0.711 1.31


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,487
Number of Sequences: 6905
Number of extensions: 14487
Number of successful extensions: 2308
Number of sequences better than 10.0: 698
length of query: 478
length of database: 5,674,871
effective HSP length: 16
effective length of query: 462
effective length of database: 5,564,391
effective search space: 2570748642
effective search space used: 2570748642
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 14 (28.2 bits)
dna update 2009. 8. 1
Homology vs DNA
Query= Contig-U05629-1 (Contig-U05629-1Q) /CSM_Contig/Contig-U05629-1Q.Seq.d
(478 letters)

Database: ddbj_B
105,743,758 sequences; 104,622,809,269 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value N

(C90739) Dictyostelium discoideum slug cDNA, clone SSJ891. 817 0.0 1
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701... 809 0.0 1
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ... 809 0.0 1
(AM397386) Simian immunodeficiency virus - mac proviral part... 48 5e-04 2
(CV884688) UCRCS04_2_010A03_T7 Ruby Orange Developing Flower... 46 0.037 2
(CV884687) UCRCS04_2_010A03_T3 Ruby Orange Developing Flower... 46 0.087 2
(AC147868) Dasypus novemcinctus clone VMRC5-86H6, WORKING DR... 36 0.13 4
(FM203877) Triticum aestivum GSS, clone RD-19R_H12_A_096.ab1. 42 0.23 2
(AJ276243) Artificial sequence for partial wGRP1 gene. 36 0.27 2
(AM397379) Simian immunodeficiency virus - mac proviral part... 48 0.31 1
(CE411374) tigr-gss-dog-17000362272228 Dog Library Canis lup... 48 0.31 1
(BG155661) saa64a04.y1 Gm-c1060 Glycine soja cDNA clone GENO... 48 0.31 1
(FK023633) GLRAD85TR JCVI-SOY3 Glycine max cDNA 5', mRNA seq... 48 0.31 1
(FK023632) GLRAD85TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq... 48 0.31 1
(EV272592) GLMBL78TF JCVI-SOY2 Glycine max cDNA 5', mRNA seq... 48 0.31 1
(FE431613) CAOP4205.fwd CAOP Selaginella moellendorffii mixe... 42 0.46 2
(FE467758) CAOS25307.rev CAOS Selaginella moellendorffii mix... 42 0.54 2
(AP010815) Solanum lycopersicum DNA, chromosome 8, clone: C0... 38 0.83 3
(AC131708) Mus musculus BAC clone RP24-127P5 from chromosome... 42 0.97 4
(AZ563894) RPCI-23-221K15.TJ RPCI-23 Mus musculus genomic cl... 34 1.2 2
(AC115594) Dictyostelium discoideum chromosome 2 map 4071862... 34 1.2 4
(AC159130) Mus musculus BAC clone RP23-401J13 from chromosom... 42 1.2 4
(CT025657) Mouse DNA sequence from clone RP23-342N19 on chro... 46 1.2 1
(AC161227) Mus musculus chromosome 19 clone RP23-135M4 map 1... 46 1.2 1
(AC141713) Apis mellifera clone CH224-56H1, *** SEQUENCING I... 46 1.2 1
(AC141648) Rattus norvegicus clone CH230-298K9, WORKING DRAF... 46 1.2 1
(AC141369) Rattus norvegicus clone CH230-299D8, WORKING DRAF... 46 1.2 1
(AC046148) Mus musculus chromosome 14 clone RP23-265D21, ***... 46 1.2 1
(FH552091) CHO_OF4069xd09f1.ab1 CHO_OF4 Nicotiana tabacum ge... 46 1.2 1
(EY656863) CS00-C1-100-087-D08-CT.F Sweet orange leaf, green... 46 1.2 1
(ES569921) TPAF-aaa57d06.g1 T.spiralis_EST Trichinella spira... 46 1.2 1
(AP010931) Solanum lycopersicum DNA, chromosome 8, clone: C0... 38 1.7 3
(AC156393) Mus musculus 10 BAC RP24-315E6 (Roswell Park Canc... 42 2.6 3
(AL096782) Plasmodium falciparum DNA *** SEQUENCING IN PROGR... 44 2.7 2
(EA695772) Sequence 74651 from patent US 7365185. 36 2.7 2
(FT026095) Rattus norvegicus DNA, BAC clone: RNB2-037F24, 3'... 40 2.7 2
(AC117075) Dictyostelium discoideum chromosome 2 map 5201047... 38 2.7 6
(AL254753) Tetraodon nigroviridis genome survey sequence PUC... 40 3.0 2
(AW620434) sj05b04.y1 Gm-c1032 Glycine max cDNA clone GENOME... 30 3.1 3
(BG046523) saa55d03.y1 Gm-c1060 Glycine soja cDNA clone GENO... 30 3.1 3
(BG046578) saa56d03.y1 Gm-c1060 Glycine soja cDNA clone GENO... 30 3.2 3
(CU928841) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 3.2 3
(DR078679) RTFEPL1_6_E07.b1_A029 Roots plus added iron Pinus... 34 3.3 2
(DR079016) RTFEPL1_8_A03.g1_A029 Roots plus added iron Pinus... 34 3.3 2
(CO362986) RTK1_7_A06.b1_A029 Roots minus potassium Pinus ta... 34 3.3 2
(CV031978) RTNACL1_5_A02.b1_A029 Roots plus added NaCl Pinus... 34 3.3 2
(DR165209) RTPHOS1_3_H10.b1_A029 Roots minus phosphorous Pin... 34 3.3 2
(DR743976) RTCU1_19_A02.g1_A029 Roots plus added copper Pinu... 34 3.3 2
(DR081748) RTFEPL1_32_B07.b1_A029 Roots plus added iron Pinu... 34 3.3 2
(BF424153) su58a03.y1 Gm-c1069 Glycine max cDNA clone GENOME... 30 3.3 3
(DR079774) RTFEPL1_17_C08.g1_A029 Roots plus added iron Pinu... 34 3.3 2
(AW226062) ST76H08 Pine TriplEx shoot tip library Pinus taed... 34 3.3 2
(BF609877) NXSI_052_A12_F NXSI (Nsf Xylem Side wood Inclined... 34 3.4 2
(BG039276) NXSI_097_B11_F NXSI (Nsf Xylem Side wood Inclined... 34 3.4 2
(AC158639) Mus musculus 10 BAC RP24-73H17 (Roswell Park Canc... 42 3.6 3
(FK023046) GLRAA54TF JCVI-SOY3 Glycine max cDNA 5', mRNA seq... 30 3.8 3
(FG992798) GLLE436TF JCVI-SOY1 Glycine max cDNA 5', mRNA seq... 30 3.8 3
(CU469491) Zebrafish DNA sequence *** SEQUENCING IN PROGRESS... 38 4.3 6
(CE250058) tigr-gss-dog-17000335862386 Dog Library Canis lup... 34 4.7 2
(DQ121048) Hucho taimen clone ZA-43 microsatellite sequence. 44 4.9 1
(AL732631) Mouse DNA sequence from clone RP23-345P19 on chro... 44 4.9 1
(AC167229) Mus musculus BAC RP24-337D17 (Roswell Park Cance... 44 4.9 1
(AC164627) Mus musculus 10 BAC RP23-382A18 (Roswell Park Can... 44 4.9 1
(AC130216) Mus musculus BAC clone RP23-218G9 from 10, comple... 44 4.9 1
(U27588) Ajellomyces capsulatum immunoreactive clone GH17 mR... 44 4.9 1
(AL161554) Arabidopsis thaliana DNA chromosome 4, contig fra... 44 4.9 1
(AL021960) Arabidopsis thaliana DNA chromosome 4, BAC clone ... 44 4.9 1
(FB787885) Sequence 7158 from Patent WO2008034648. 44 4.9 1
(FB783016) Sequence 2289 from Patent WO2008034648. 44 4.9 1
(DL144111) RESEQUENCING PATHOGEN MICROARRAY. 44 4.9 1
(DL089965) Diagnosis of existing illnesses or that praedispo... 44 4.9 1
(DL089964) Diagnosis of existing illnesses or that praedispo... 44 4.9 1
(DL013330) Diagnosis of existing illnesses or that praedispo... 44 4.9 1
(DL013329) Diagnosis of existing illnesses or that praedispo... 44 4.9 1
(DI160561) RESEQUENCING PATHOGEN MICROARRAY. 44 4.9 1
(GM625794) Sequence 4316 from Patent EP1942197. 44 4.9 1
(GM625793) Sequence 4315 from Patent EP1942197. 44 4.9 1
(AR494141) Sequence 1 from patent US 6720152. 44 4.9 1
(AF131999) Plasmodium falciparum putative erythrocyte bindin... 44 4.9 1
(AC162666) Bos taurus clone CH240-120N16, WORKING DRAFT SEQU... 44 4.9 1
(AC123159) Rattus norvegicus clone CH230-90B21, *** SEQUENCI... 44 4.9 1
(AC123142) Rattus norvegicus clone CH230-144K23, *** SEQUENC... 44 4.9 1
(AC113774) Rattus norvegicus clone CH230-35N14, *** SEQUENCI... 44 4.9 1
(AC225818) Zea mays chromosome 6 clone CH201-158H1; ZMMBBc01... 44 4.9 1
(AC221377) Bos taurus clone CH240-405D7, WORKING DRAFT SEQUE... 44 4.9 1
(AC195968) Zea mays chromosome 6 clone ZMMBBb-134E10; ZMMBBb... 44 4.9 1
(AC172429) Bos taurus clone CH240-524I12, WORKING DRAFT SEQU... 44 4.9 1
(BH435042) BOGPE03TF BOGP Brassica oleracea genomic clone BO... 44 4.9 1
(AZ314899) 1M0031I23R Mouse 10kb plasmid UUGC1M library Mus ... 44 4.9 1
(EK418906) 1095515487472 Global-Ocean-Sampling_GS-31-01-01-1... 44 4.9 1
(EJ806082) 1093017459944 Global-Ocean-Sampling_GS-30-02-01-1... 44 4.9 1
(EJ566663) 1092959719412 Global-Ocean-Sampling_GS-29-01-01-1... 44 4.9 1
(EJ524867) 1092955176463 Global-Ocean-Sampling_GS-29-01-01-1... 44 4.9 1
(CC482779) CH240_311E22.T7 CHORI-240 Bos taurus genomic clon... 44 4.9 1
(BZ667267) PUBCH19TD ZM_0.6_1.0_KB Zea mays genomic clone ZM... 44 4.9 1
(BZ282741) CH230-384D21.TJ CHORI-230 Segment 2 Rattus norveg... 44 4.9 1
(EE566803) BNZB_UP_139_A03_27SEP2005_031 Brassica napus BNZB... 44 4.9 1
(DN481297) tef4_g21.z1.abd tef (Kaye Murri) flower Eragrosti... 44 4.9 1
(CV622834) zcm50g11.y1 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV622115) zcn29b02.y2 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV620629) zcn20c12.y2 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV620367) zcm51c06.y3 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV605340) zcm93d01.x1 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV604735) zcn24e01.y2 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV604046) zcn19c12.y2 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV601328) zcm94g07.y1 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV600868) zcm29e08.y2 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV600813) zcn14b05.y2 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV600424) zcn35e08.y2 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV597218) zcn32c04.y2 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV596394) zcm33d03.y2 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV594786) zcm28d04.y1 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV594778) zcn12f08.y2 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV594009) zcn32h09.y2 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV592258) zcn11f08.y2 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV589793) zcm33g09.y2 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV587270) zcn01h10.y2 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV586286) zcn18a09.y2 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV584745) zcn34e11.y2 F_HC7CDNA Ajellomyces capsulatus cDNA... 44 4.9 1
(CV504867) 71440.1 Mixed Floral Solanum tuberosum cDNA clone... 44 4.9 1
(CD477271) eca01-53ms4-c07 Eca01 Eschscholzia californica cD... 44 4.9 1
(BU023309) QHF10H17.yg.ab1 QH_EFGHJ sunflower RHA280 Heliant... 44 4.9 1
(BQ972814) QHI10O05.yg.ab1 QH_ABCDI sunflower RHA801 Heliant... 44 4.9 1
(BP289221) Homo sapiens cDNA clone: LNF01603, Sugano cDNA li... 44 4.9 1
(GO297765) CAZC578.rev CAZC Teleopsis dalmanni Mid-pupal eye... 44 4.9 1
(FE360840) CBNN18914.fwd CBNN_Daphnia_pulex_Chosen_One_Libra... 44 4.9 1
(FE360839) CBNN18914.rev CBNN_Daphnia_pulex_Chosen_One_Libra... 44 4.9 1
(FE310463) CANU2527.fwd CANU_Daphnia_pulex_Log50_Library_7 D... 44 4.9 1
(FE310462) CANU2527.rev CANU_Daphnia_pulex_Log50_Library_7 D... 44 4.9 1
(FE284891) CANH2738.fwd CANH_Daphnia_pulex_Log50_Library_21 ... 44 4.9 1
(FE284890) CANH2738.rev CANH_Daphnia_pulex_Log50_Library_21 ... 44 4.9 1
(FE277979) CANB1576.fwd CANB_Daphnia_pulex_Log50_Library_13 ... 44 4.9 1
(FE277978) CANB1576.rev CANB_Daphnia_pulex_Log50_Library_13 ... 44 4.9 1
(CP000139) Bacteroides vulgatus ATCC 8482, complete genome. 44 4.9 1
(CU656003) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f... 42 5.0 2
(EF117807) Setaria italica clone GB-SIM-105 microsatellite s... 40 5.2 2
(BQ140069) NF028E07PH1F1054 Phoma-infected Medicago truncatu... 40 5.5 2
(BJ420384) Dictyostelium discoideum cDNA clone:ddv39j02, 5' ... 34 5.7 2
(FN365938) Schistosoma mansoni genome sequence supercontig S... 34 5.8 2
(AC095588) Rattus norvegicus clone CH230-8I16, WORKING DRAFT... 42 6.1 2
(FG718159) G1144P36RJ1.T0 Anolis carolinensis pooled normali... 40 6.1 2
(FG075686) UI-FF-IF0-abm-a-22-0-UI.r1 Ceratitis capitata emb... 38 6.2 2
(DH708923) Rattus norvegicus DNA, BAC clone: RNB1-271O19, 5'... 34 6.4 2
(GH115026) G993P146FL10.T0 Neurospora crassa cDNA - 1 hour G... 34 6.4 2
(FG990203) GLLD221TF JCVI-SOY1 Glycine max cDNA 5', mRNA seq... 30 6.6 3
(GH096457) G993P121FC19.T0 Neurospora crassa cDNA - 1 hour G... 34 6.8 2
(GH048428) G906P11RB19.T0 Neurospora crassa cDNA - 7 hours V... 34 6.8 2
(EY844892) CA26-C1-002-042-H07-CT.F Sour orange leaf, field ... 34 6.9 2
(EX368257) GQ03213.SP6_I22 GQ032 - Shoot tip (Normalized lib... 34 6.9 2
(EX367891) GQ03213.B7_I22 GQ032 - Shoot tip (Normalized libr... 34 6.9 2
(EX366795) GQ03211.SP6_I22 GQ032 - Shoot tip (Normalized lib... 34 6.9 2
(EX366426) GQ03211.B7_I22 GQ032 - Shoot tip (Normalized libr... 34 6.9 2
(FG706576) G1144P346RK24.T0 Anolis carolinensis pooled norma... 40 7.0 2
(FG664099) G1142P313RH4.T0 Anolis carolinensis pooled normal... 40 7.0 2
(AC095444) Rattus norvegicus clone CH230-7F19, *** SEQUENCIN... 34 7.1 6
(FG656791) G1142P314RN13.T0 Anolis carolinensis pooled norma... 40 7.2 2
(EX366489) GQ03211.B7_L16 GQ032 - Shoot tip (Normalized libr... 34 7.2 2
(EX366858) GQ03211.SP6_L16 GQ032 - Shoot tip (Normalized lib... 34 7.3 2
(FG747971) G1146P341RK9.T0 Anolis carolinensis pooled normal... 40 7.5 2
(AP008244) Lotus japonicus genomic DNA, chromosome 4, clone:... 38 7.7 5
(FN363910) Schistosoma mansoni genome sequence supercontig S... 34 7.9 2
(AM453688) Vitis vinifera contig VV78X064864.4, whole genome... 42 8.2 2
(DU960411) 231458 Tomato MboI BAC Library Solanum lycopersic... 40 8.5 2
(CQ338739) Sequence 12833 from Patent WO0157275. 36 8.6 2
(CQ301521) Sequence 12626 from Patent WO0186003. 36 8.6 2
(CQ264425) Sequence 12686 from Patent WO0157277. 36 8.6 2
(CQ226283) Sequence 13122 from Patent WO0157273. 36 8.6 2
(CQ202940) Sequence 5217 from Patent WO0157271. 36 8.6 2
(CQ178596) Sequence 9992 from Patent WO0157274. 36 8.6 2
(CQ143105) Sequence 13127 from Patent WO0157276. 36 8.6 2
(CQ104386) Sequence 13245 from Patent WO0157272. 36 8.6 2
(CQ073502) Sequence 9302 from Patent WO0157278. 36 8.6 2
(CQ054267) Sequence 5087 from Patent WO0157270. 36 8.6 2

>(C90739) Dictyostelium discoideum slug cDNA, clone SSJ891.
Length = 479

Score = 817 bits (412), Expect = 0.0
Identities = 412/412 (100%)
Strand = Plus / Plus


Query: 1 cacaaattgataaattagaggatatacattgttttgttagagagagtagaactggtacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacaaattgataaattagaggatatacattgttttgttagagagagtagaactggtacag 60


Query: 61 agaaaccaccaccaccacaattcatttcatttggtggtaaatcgtcatctgattatattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaaaccaccaccaccacaattcatttcatttggtggtaaatcgtcatctgattatattc 120


Query: 121 aaaataaagcatcatattcagctccattaacttcaagtgttagtagtaatagtttaacga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaaataaagcatcatattcagctccattaacttcaagtgttagtagtaatagtttaacga 180


Query: 181 gtagttataattcagcgacaacaacaccaacaccagcaccacgttcaactccaattaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtagttataattcagcgacaacaacaccaacaccagcaccacgttcaactccaattaatt 240


Query: 241 tatctaaaaagaaacaagcaaaagcattatatgattatgttggtagtgatgctactgaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatctaaaaagaaacaagcaaaagcattatatgattatgttggtagtgatgctactgaat 300


Query: 301 tggactttttcgccggtgatataattacaattttagacgaagatgaatctggttggttta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggactttttcgccggtgatataattacaattttagacgaagatgaatctggttggttta 360


Query: 361 gaggtgaattgggtgatagaattggtttatatccttcaaattattgtgaacc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaggtgaattgggtgatagaattggtttatatccttcaaattattgtgaacc 412

Lambda K H
1.37 0.711 1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 105743758
Number of Hits to DB: 547,521,648
Number of extensions: 34975363
Number of successful extensions: 3940656
Number of sequences better than 10.0: 174
Length of query: 478
Length of database: 104,622,809,269
Length adjustment: 23
Effective length of query: 455
Effective length of database: 102,190,702,835
Effective search space: 46496769789925
Effective search space used: 46496769789925
X1: 11 (21.8 bits)
S2: 21 (42.1 bits)

protein update 2009. 8. 2
Homology vs Protein
Query= Contig-U05629-1 (Contig-U05629-1Q) /CSM_Contig/Contig-U05629-1Q.Seq.d
(478 letters)

Database: nrp_A
3,268,448 sequences; 1,061,185,681 total letters

Searching..................................................done

Score E
Sequences producing significant alignments: (bits) Value

AC117070_15(AC117070|pid:none) Dictyostelium discoideum chromoso... 207 7e-53
FN357366_48(FN357366|pid:none) Schistosoma mansoni genome sequen... 64 2e-09
S31926(S31926) myosin IB heavy chain, brush border - chicken &X... 62 5e-09
BC079736_1(BC079736|pid:none) Xenopus laevis MGC84055 protein, m... 62 6e-09
(Q91X43) RecName: Full=SH3 domain-containing protein 19; AltName... 61 1e-08
BC031117_1(BC031117|pid:none) Mus musculus SH3 domain protein D1... 61 1e-08
(Q9JLQ0) RecName: Full=CD2-associated protein; AltName: Full=Mes... 61 1e-08
AY893005_1(AY893005|pid:none) Synthetic construct Homo sapiens c... 60 2e-08
AX405667_1(AX405667|pid:none) Sequence 82 from Patent WO0222660. 60 2e-08
X98411_1(X98411|pid:none) Homo sapiens partial mRNA for myosin-IF. 60 2e-08
BC028071_1(BC028071|pid:none) Homo sapiens myosin IF, mRNA (cDNA... 60 2e-08
AF528163_2(AF528163|pid:none) Mus musculus strain 129/Sv chromos... 60 2e-08
AK021181_1(AK021181|pid:none) Mus musculus ES cells cDNA, RIKEN ... 60 2e-08
(O13154) RecName: Full=Protein kinase C and casein kinase substr... 60 2e-08
(P70248) RecName: Full=Myosin-If; &A59300(A59300) &X97650_1(X97... 60 2e-08
BC046502_1(BC046502|pid:none) Mus musculus myosin IF, mRNA (cDNA... 60 2e-08
AB290178_1(AB290178|pid:none) Homo sapiens mRNA for MYO1F varian... 60 2e-08
AB210037_1(AB210037|pid:none) Homo sapiens mRNA for MYO1F varian... 60 2e-08
AF077003_1(AF077003|pid:none) Mus musculus SH3 domain-containing... 60 2e-08
(Q9BY11) RecName: Full=Protein kinase C and casein kinase substr... 60 3e-08
BX255972_4(BX255972|pid:none) Human DNA sequence from clone RP11... 60 3e-08
BC102654_1(BC102654|pid:none) Bos taurus CD2-associated protein,... 59 4e-08
BC167419_1(BC167419|pid:none) Xenopus tropicalis protein kinase ... 59 4e-08
BC074116_1(BC074116|pid:none) Xenopus laevis MGC81789 protein, m... 59 5e-08
(Q9DDA9) RecName: Full=Protein kinase C and casein kinase substr... 59 5e-08
BC077276_1(BC077276|pid:none) Xenopus laevis hypothetical protei... 59 5e-08
BC128665_1(BC128665|pid:none) Xenopus laevis cDNA clone MGC:1542... 59 7e-08
EU021219_1(EU021219|pid:none) Lampetra fluviatilis PACSIN 1 mRNA... 59 7e-08
(Q99JB8) RecName: Full=Protein kinase C and casein kinase II sub... 59 7e-08
AF139493_1(AF139493|pid:none) Rattus norvegicus syndapin IIab mR... 59 7e-08
(Q9WVE8) RecName: Full=Protein kinase C and casein kinase substr... 59 7e-08
(Q9UKS6) RecName: Full=Protein kinase C and casein kinase substr... 59 7e-08
BC093196_1(BC093196|pid:none) Danio rerio zgc:112091, mRNA (cDNA... 59 7e-08
AY858802_1(AY858802|pid:none) Rattus norvegicus syndapin III (Sd... 59 7e-08
AK158686_1(AK158686|pid:none) Mus musculus visual cortex cDNA, R... 59 7e-08
BT072142_1(BT072142|pid:none) Salmo salar clone ssal-rgf-513-255... 59 7e-08
BC085213_1(BC085213|pid:none) Xenopus laevis hypothetical LOC495... 59 7e-08
(Q9Z0W5) RecName: Full=Protein kinase C and casein kinase substr... 59 7e-08
AK083414_1(AK083414|pid:none) Mus musculus 9 days embryo whole b... 59 7e-08
AF139494_1(AF139494|pid:none) Rattus norvegicus syndapin IIba mR... 59 7e-08
FN392321_1185(FN392321|pid:none) Pichia pastoris GS115 chromosom... 58 9e-08
AL022476_4(AL022476|pid:none) Human DNA sequence from clone RP3-... 58 9e-08
(Q9UNF0) RecName: Full=Protein kinase C and casein kinase substr... 58 9e-08
DQ896161_1(DQ896161|pid:none) Synthetic construct Homo sapiens c... 58 9e-08
U97407_8(U97407|pid:none) Caenorhabditis elegans cosmid C34G6, c... 58 1e-07
BC051391_1(BC051391|pid:none) Mus musculus myosin IE, mRNA (cDNA... 58 1e-07
BC153241_1(BC153241|pid:none) Bos taurus protein kinase C and ca... 58 1e-07
G87789(G87789)protein C34G6.7 [imported] - Caenorhabditis elegans 58 1e-07
(Q12965) RecName: Full=Myosin-Ie; AltName: Full=Myosin-Ic; &AB2... 58 1e-07
DQ213312_1(DQ213312|pid:none) Taeniopygia guttata clone 0061P002... 58 1e-07
(A7MBI0) RecName: Full=Protein kinase C and casein kinase substr... 58 1e-07
AY205155_1(AY205155|pid:none) Rattus norvegicus CD2AP/CMS mRNA, ... 57 2e-07
BT045856_1(BT045856|pid:none) Salmo salar clone ssal-rgf-534-332... 57 2e-07
AB168387_1(AB168387|pid:none) Macaca fascicularis testis cDNA cl... 57 2e-07
BC085613_1(BC085613|pid:none) Homo sapiens SH3 domain containing... 57 2e-07
AK092528_1(AK092528|pid:none) Homo sapiens cDNA FLJ35209 fis, cl... 57 2e-07
AJ720324_1(AJ720324|pid:none) Gallus gallus mRNA for hypothetica... 57 2e-07
AL133047_1(AL133047|pid:none) Homo sapiens mRNA; cDNA DKFZp434D0... 57 2e-07
BX647422_1(BX647422|pid:none) Homo sapiens mRNA; cDNA DKFZp686I0... 57 2e-07
AK294476_1(AK294476|pid:none) Homo sapiens cDNA FLJ61692 complet... 57 2e-07
AK291025_1(AK291025|pid:none) Homo sapiens cDNA FLJ76174 complet... 57 2e-07
BC166180_1(BC166180|pid:none) Xenopus tropicalis hypothetical pr... 57 2e-07
BC108893_1(BC108893|pid:none) Homo sapiens SH3 domain containing... 57 2e-07
BC108890_1(BC108890|pid:none) Homo sapiens SH3 domain containing... 57 2e-07
CR855718_1(CR855718|pid:none) Xenopus tropicalis finished cDNA, ... 57 2e-07
AK314405_1(AK314405|pid:none) Homo sapiens cDNA, FLJ95184, highl... 57 3e-07
AK303083_1(AK303083|pid:none) Homo sapiens cDNA FLJ57683 complet... 57 3e-07
BC030586_1(BC030586|pid:none) Homo sapiens signal transducing ad... 57 3e-07
BC086846_1(BC086846|pid:none) Danio rerio CD2-associated protein... 56 4e-07
BX511269_1(BX511269|pid:none) Zebrafish DNA sequence from clone ... 56 4e-07
(P70297) RecName: Full=Signal transducing adapter molecule 1; ... 56 5e-07
CR859070_1(CR859070|pid:none) Pongo abelii mRNA; cDNA DKFZp469E0... 56 5e-07
(O43125) RecName: Full=Protein csh3; &AB011825_1(AB011825|pid:n... 55 6e-07
CU633900_651(CU633900|pid:none) Podospora anserina genomic DNA c... 55 6e-07
BC158212_1(BC158212|pid:none) Xenopus laevis hypothetical protei... 55 6e-07
(Q07839) RecName: Full=Antigen EG13; &B48580(B48580) &M95051_1(... 55 8e-07
(Q07840) RecName: Full=Antigen EM13; &A48580(A48580) &M84807_1(... 55 8e-07
TVMSVV(A61187;A39576;S36941;S23669)transforming protein vav - mo... 55 1e-06
BC020487_1(BC020487|pid:none) Mus musculus vav 1 oncogene, mRNA ... 55 1e-06
AK088586_1(AK088586|pid:none) Mus musculus 2 days neonate thymus... 55 1e-06
AY119287_1(AY119287|pid:none) Drosophila melanogaster SD28142 fu... 55 1e-06
AK154183_1(AK154183|pid:none) Mus musculus NOD-derived CD11c +ve... 55 1e-06
BC168933_1(BC168933|pid:none) Rattus norvegicus signal transduci... 55 1e-06
BC091160_1(BC091160|pid:none) Rattus norvegicus vav 1 guanine nu... 55 1e-06
AK132886_1(AK132886|pid:none) Mus musculus adult male testis cDN... 55 1e-06
AK151373_1(AK151373|pid:none) Mus musculus bone marrow macrophag... 55 1e-06
CR759951_10(CR759951|pid:none) Zebrafish DNA sequence from clone... 54 1e-06
A47106(A47106;B47106)myosin heavy chain ID - slime mold (Dictyos... 54 1e-06
CU928174_47(CU928174|pid:none) Zygosaccharomyces rouxii strain C... 54 1e-06
(Q08DN7) RecName: Full=Proto-oncogene vav; &BC123646_1(BC123646... 54 1e-06
AK303280_1(AK303280|pid:none) Homo sapiens cDNA FLJ52037 complet... 54 2e-06
AK303470_1(AK303470|pid:none) Homo sapiens cDNA FLJ52039 complet... 54 2e-06
BT081515_1(BT081515|pid:none) Rana catesbeiana clone rcat-evr-51... 54 2e-06
BC124012_1(BC124012|pid:none) Xenopus tropicalis hypothetical pr... 54 2e-06
AY891115_1(AY891115|pid:none) Synthetic construct Homo sapiens c... 54 2e-06
(O75791) RecName: Full=GRB2-related adapter protein 2; AltName: ... 54 2e-06
AC116330_30(AC116330|pid:none) Dictyostelium discoideum chromoso... 54 2e-06
AK303332_1(AK303332|pid:none) Homo sapiens cDNA FLJ50399 complet... 54 2e-06
(Q557J6) RecName: Full=Drebrin-like protein; AltName: Full=Actin... 54 2e-06
AK303512_1(AK303512|pid:none) Homo sapiens cDNA FLJ50433 complet... 54 2e-06
CR541849_1(CR541849|pid:none) Homo sapiens full open reading fra... 54 2e-06
AY893977_1(AY893977|pid:none) Synthetic construct Homo sapiens c... 54 2e-06
EF134956_1(EF134956|pid:none) Lampetra fluviatilis intersectin m... 54 2e-06
BC045442_1(BC045442|pid:none) Danio rerio signal transducing ada... 54 2e-06
BC046842_1(BC046842|pid:none) Xenopus laevis myosin I e, mRNA (c... 54 2e-06
BC170413_1(BC170413|pid:none) Xenopus laevis intersectin, mRNA (... 54 2e-06
(O42287) RecName: Full=Intersectin-1; &AF032118_1(AF032118|pid:... 54 2e-06
(P19706) RecName: Full=Myosin heavy chain IB; AltName: Full=Myos... 54 2e-06
MWAXIB(JQ0095;B34448)myosin heavy chain IB - Acanthamoeba castel... 54 2e-06
BC110717_1(BC110717|pid:none) Xenopus laevis myosin I e, mRNA (c... 54 2e-06
BC013361_1(BC013361|pid:none) Homo sapiens vav 1 guanine nucleot... 53 3e-06
AK313307_1(AK313307|pid:none) Homo sapiens cDNA, FLJ93820, highl... 53 3e-06
TVHUVV(B39576;S05382)transforming protein vav - human (fragments) 53 3e-06
AK151367_1(AK151367|pid:none) Mus musculus bone marrow macrophag... 53 3e-06
(P15498) RecName: Full=Proto-oncogene vav; &AF030227_1(AF030227... 53 3e-06
BC084472_1(BC084472|pid:none) Xenopus tropicalis myosin IF, mRNA... 53 3e-06
AK301128_1(AK301128|pid:none) Homo sapiens cDNA FLJ53479 complet... 53 3e-06
(Q5KFQ8) RecName: Full=Class E vacuolar protein-sorting machiner... 53 3e-06
X16316_1(X16316|pid:none) Human mRNA for vav oncogene. 53 3e-06
BX548038_1(BX548038|pid:none) Zebrafish DNA sequence from clone ... 53 4e-06
U52515_1(U52515|pid:none) Caenorhabditis elegans class I unconve... 53 4e-06
BC125934_1(BC125934|pid:none) Danio rerio si:dkey-9a20.6, mRNA (... 53 4e-06
(Q6C2N2) RecName: Full=Class E vacuolar protein-sorting machiner... 53 4e-06
(A4RF61) RecName: Full=Class E vacuolar protein-sorting machiner... 53 4e-06
(A6QLK6) RecName: Full=GRB2-related adapter protein; &BC147998_... 53 4e-06
(Q6FN49) RecName: Full=Class E vacuolar protein-sorting machiner... 53 4e-06
BC085566_1(BC085566|pid:none) Danio rerio signal transducing ada... 53 4e-06
AE014134_3331(AE014134|pid:none) Drosophila melanogaster chromos... 52 5e-06
BT082080_1(BT082080|pid:none) Drosophila melanogaster GH28580 fu... 52 5e-06
AF053957_1(AF053957|pid:none) Drosophila melanogaster dynamin as... 52 5e-06
BT024977_1(BT024977|pid:none) Drosophila melanogaster IP14822 fu... 52 5e-06
AC116984_47(AC116984|pid:none) Dictyostelium discoideum chromoso... 52 5e-06
AJ224676_1(AJ224676|pid:none) Drosophila melanogaster mRNA for r... 52 5e-06
AF236119_1(AF236119|pid:none) Homo sapiens cell-line H93D8 T cel... 52 5e-06
AE014134_3450(AE014134|pid:none) Drosophila melanogaster chromos... 52 5e-06
AP007162_207(AP007162|pid:none) Aspergillus oryzae RIB40 genomic... 52 5e-06
AB384587_1(AB384587|pid:none) Synthetic construct DNA, clone: pF... 52 7e-06
AF248540_1(AF248540|pid:none) Homo sapiens intersectin 2 (SH3D1B... 52 7e-06
BC146779_1(BC146779|pid:none) Homo sapiens intersectin 2, mRNA (... 52 7e-06
(Q99469) RecName: Full=SH3 and cysteine-rich domain-containing p... 52 7e-06
AK122480_1(AK122480|pid:none) Mus musculus premature mRNA for mK... 52 7e-06
U61167_1(U61167|pid:none) Human SH3 domain-containing protein SH... 52 7e-06
AK160794_1(AK160794|pid:none) Mus musculus 14, 17 days embryo he... 52 7e-06
AF182199_1(AF182199|pid:none) Homo sapiens intersectin 2 short i... 52 7e-06
AF169621_1(AF169621|pid:none) Mus musculus Ese1 protein mRNA, pa... 52 7e-06
BC156473_1(BC156473|pid:none) Synthetic construct Mus musculus c... 52 7e-06
AF132478_1(AF132478|pid:none) Mus musculus Ese1 protein mRNA, co... 52 7e-06
AK082606_1(AK082606|pid:none) Mus musculus 0 day neonate cerebel... 52 7e-06
CU633895_130(CU633895|pid:none) Podospora anserina genomic DNA c... 52 7e-06
(Q9NZM3) RecName: Full=Intersectin-2; AltName: Full=SH3 domain-c... 52 7e-06
(Q9Z0R4) RecName: Full=Intersectin-1; AltName: Full=EH and SH3 d... 52 7e-06
AB033082_1(AB033082|pid:none) Homo sapiens mRNA for KIAA1256 pro... 52 7e-06
AF001630_1(AF001630|pid:none) Homo sapiens SH3P18-like WASP asso... 52 7e-06
(Q9Z0R6) RecName: Full=Intersectin-2; AltName: Full=SH3 domain-c... 52 7e-06
AK299160_1(AK299160|pid:none) Homo sapiens cDNA FLJ60332 complet... 52 7e-06
BC138262_1(BC138262|pid:none) Mus musculus intersectin 2, mRNA (... 52 7e-06
(P38753) RecName: Full=Class E vacuolar protein-sorting machiner... 52 9e-06
(O75886) RecName: Full=Signal transducing adapter molecule 2; ... 52 9e-06
BX005416_2(BX005416|pid:none) Zebrafish DNA sequence from clone ... 52 9e-06
AF114488_1(AF114488|pid:none) Homo sapiens intersectin short iso... 52 9e-06
AF042274_1(AF042274|pid:none) Homo sapiens signal transducing ad... 52 9e-06
AF064243_1(AF064243|pid:none) Homo sapiens intersectin short for... 52 9e-06
EU120734_1(EU120734|pid:none) Homo sapiens intersectin 1 long fo... 52 9e-06
AF132672_1(AF132672|pid:none) Rattus norvegicus EH-domain/SH3-do... 52 9e-06
EU120735_1(EU120735|pid:none) Homo sapiens intersectin 1 short f... 52 9e-06
AF180522_1(AF180522|pid:none) Homo sapiens intersectin short for... 52 9e-06
AE014297_4852(AE014297|pid:none) Drosophila melanogaster chromos... 52 9e-06
U61166_1(U61166|pid:none) Human SH3 domain-containing protein SH... 52 9e-06
AL606751_2(AL606751|pid:none) Zebrafish DNA sequence from clone ... 52 9e-06
FJ629586_1(FJ629586|pid:none) Synthetic construct Drosophila mel... 52 9e-06
BC160597_1(BC160597|pid:none) Xenopus tropicalis hypothetical pr... 52 9e-06
BT009935_1(BT009935|pid:none) Drosophila melanogaster SD08724 fu... 52 9e-06
EU120733_1(EU120733|pid:none) Homo sapiens intersectin 1 long fo... 52 9e-06
AF064244_1(AF064244|pid:none) Homo sapiens intersectin long form... 52 9e-06
(Q15811) RecName: Full=Intersectin-1; AltName: Full=SH3 domain-c... 52 9e-06
BC043767_1(BC043767|pid:none) Xenopus laevis signal transducing ... 52 9e-06
EU140800_1(EU140800|pid:none) Homo sapiens intersectin 1 short f... 52 9e-06
(Q9WVE9) RecName: Full=Intersectin-1; AltName: Full=EH domain an... 52 9e-06
DQ679754_1(DQ679754|pid:none) Homo sapiens intersectin 1 short f... 52 9e-06
FN392320_986(FN392320|pid:none) Pichia pastoris GS115 chromosome... 52 9e-06
BC076759_1(BC076759|pid:none) Xenopus laevis hypothetical protei... 52 9e-06
BX005416_1(BX005416|pid:none) Zebrafish DNA sequence from clone ... 52 9e-06
(A0JNJ1) RecName: Full=SH3 and cysteine-rich domain-containing p... 51 1e-05
D89164_1(D89164|pid:none) Schizosaccharomyces pombe mRNA, partia... 51 1e-05
(O88811) RecName: Full=Signal transducing adapter molecule 2; ... 51 1e-05
(Q9P7E8) RecName: Full=Protein app1; &AL162631_2(AL162631|pid:n... 51 1e-05
AY222991_1(AY222991|pid:none) Schistosoma japonicum clone ZZD105... 51 1e-05
CU928169_407(CU928169|pid:none) Kluyveromyces thermotolerans str... 51 1e-05
BC105895_1(BC105895|pid:none) Rattus norvegicus GRB2-related ada... 51 1e-05
FN314829_1(FN314829|pid:none) Schistosoma japonicum isolate Anhu... 51 1e-05
AE017356_184(AE017356|pid:none) Cryptococcus neoformans var. neo... 51 1e-05
FN357377_11(FN357377|pid:none) Schistosoma mansoni genome sequen... 51 1e-05
AF051353_1(AF051353|pid:none) Acanthamoeba castellanii myosin IC... 51 1e-05
BT046041_1(BT046041|pid:none) Salmo salar clone ssal-rgf-540-039... 51 1e-05
BC112604_1(BC112604|pid:none) Bos taurus signal transducing adap... 51 1e-05
(P10569) RecName: Full=Myosin IC heavy chain; &J02974_1(J02974|... 51 1e-05
AM167903_1(AM167903|pid:none) Suberites domuncula mRNA for osteo... 51 1e-05
(P49710) RecName: Full=Hematopoietic lineage cell-specific prote... 51 1e-05
CR626882_3(CR626882|pid:none) Zebrafish DNA sequence from clone ... 51 1e-05
AF064260_1(AF064260|pid:none) Strongylocentrotus purpuratus SRC8... 50 2e-05
BC095818_1(BC095818|pid:none) Danio rerio zgc:112450, mRNA (cDNA... 50 2e-05
(Q1E878) RecName: Full=Class E vacuolar protein-sorting machiner... 50 2e-05
AE016816_470(AE016816|pid:none) Ashbya gossypii (= Eremothecium ... 50 2e-05
A33284(A33284) myosin heavy chain IB - slime mold (Dictyostelium... 50 3e-05
AK298696_1(AK298696|pid:none) Homo sapiens cDNA FLJ59379 complet... 50 3e-05
BC079081_1(BC079081|pid:none) Rattus norvegicus hematopoietic ce... 50 3e-05
AM270227_6(AM270227|pid:none) Aspergillus niger contig An11c0100... 50 3e-05
AY149915_1(AY149915|pid:none) Ustilago maydis guanyl nucleotide ... 50 3e-05
(Q9CX99) RecName: Full=GRB2-related adapter protein; &AK018457_... 50 3e-05
BC074079_1(BC074079|pid:none) Danio rerio zgc:91835, mRNA (cDNA ... 50 3e-05
(Q5A895) RecName: Full=Class E vacuolar protein-sorting machiner... 50 3e-05
(Q6CVA8) RecName: Full=Class E vacuolar protein-sorting machiner... 50 3e-05
BC096782_1(BC096782|pid:none) Danio rerio zgc:109892, mRNA (cDNA... 50 3e-05
FM992695_111(FM992695|pid:none) Candida dubliniensis CD36 chromo... 50 3e-05
AB463258_1(AB463258|pid:none) Synthetic construct DNA, clone: pF... 50 3e-05
BC096761_1(BC096761|pid:none) Mus musculus proline-serine-threon... 50 3e-05
CR936378_2(CR936378|pid:none) Zebrafish DNA sequence from clone ... 50 3e-05
AK056628_1(AK056628|pid:none) Homo sapiens cDNA FLJ32066 fis, cl... 50 3e-05
CR380955_381(CR380955|pid:none) Candida glabrata strain CBS138 c... 50 3e-05
AJ308233_4(AJ308233|pid:none) Tetraodon nigroviridis aw502783-li... 50 3e-05
AM494964_199(AM494964|pid:none) Leishmania braziliensis chromoso... 50 3e-05
(Q7S6J4) RecName: Full=Class E vacuolar protein-sorting machiner... 50 3e-05
BC103355_1(BC103355|pid:none) Bos taurus hematopoietic cell-spec... 49 4e-05
CU928179_27(CU928179|pid:none) Zygosaccharomyces rouxii strain C... 49 4e-05
(Q13588) RecName: Full=GRB2-related adapter protein; &AY888503_... 49 4e-05
BC073454_1(BC073454|pid:none) Xenopus laevis MGC80961 protein, m... 49 4e-05
AL392107_2(AL392107|pid:none) Human DNA sequence from clone RP11... 49 4e-05
(Q75DS3) RecName: Full=Class E vacuolar protein-sorting machiner... 49 4e-05
BX784028_3(BX784028|pid:none) Zebrafish DNA sequence from clone ... 49 4e-05
AY891149_1(AY891149|pid:none) Synthetic construct Homo sapiens c... 49 4e-05
BC158859_1(BC158859|pid:none) Rattus norvegicus proline-serine-t... 49 4e-05
AM393221_1(AM393221|pid:none) Synthetic construct Homo sapiens c... 49 6e-05
AM393501_1(AM393501|pid:none) Synthetic construct Homo sapiens c... 49 6e-05
EU832635_1(EU832635|pid:none) Synthetic construct Homo sapiens c... 49 6e-05
AY892324_1(AY892324|pid:none) Synthetic construct Homo sapiens c... 49 6e-05
AM392656_1(AM392656|pid:none) Synthetic construct Homo sapiens c... 49 6e-05
AM393012_1(AM393012|pid:none) Synthetic construct Homo sapiens c... 49 6e-05
AM393706_1(AM393706|pid:none) Synthetic construct Homo sapiens c... 49 6e-05
AK304653_1(AK304653|pid:none) Homo sapiens cDNA FLJ54581 complet... 49 6e-05
AY383729_1(AY383729|pid:none) Mus musculus TUBA mRNA, complete c... 49 6e-05
AM393834_1(AM393834|pid:none) Synthetic construct Homo sapiens c... 49 6e-05
(Q14247) RecName: Full=Src substrate cortactin; AltName: Full=Am... 49 6e-05
BC011883_1(BC011883|pid:none) Homo sapiens sorbin and SH3 domain... 49 6e-05
FJ594436_1(FJ594436|pid:none) Salmo salar NADPH oxidase cytosoli... 49 6e-05
(P14317) RecName: Full=Hematopoietic lineage cell-specific prote... 49 6e-05
BC059524_1(BC059524|pid:none) Danio rerio abl-interactor 1, mRNA... 49 6e-05
AM393693_1(AM393693|pid:none) Synthetic construct Homo sapiens c... 49 6e-05
(O43586) RecName: Full=Proline-serine-threonine phosphatase-inte... 49 6e-05
AM393190_1(AM393190|pid:none) Synthetic construct Homo sapiens c... 49 6e-05
CR861394_1(CR861394|pid:none) Pongo abelii mRNA; cDNA DKFZp459H1... 49 6e-05
BX255904_2(BX255904|pid:none) Zebrafish DNA sequence from clone ... 49 6e-05
BC098740_1(BC098740|pid:none) Rattus norvegicus GRB2-related ada... 49 6e-05
(A5D7F8) RecName: Full=Putative E3 ubiquitin-protein ligase SH3R... 49 6e-05
AM393014_1(AM393014|pid:none) Synthetic construct Homo sapiens c... 49 6e-05
AK091778_1(AK091778|pid:none) Homo sapiens cDNA FLJ34459 fis, cl... 49 6e-05
AM392985_1(AM392985|pid:none) Synthetic construct Homo sapiens c... 49 6e-05
BC151038_1(BC151038|pid:none) Mus musculus sorbin and SH3 domain... 49 6e-05
AK296461_1(AK296461|pid:none) Homo sapiens cDNA FLJ53348 complet... 49 6e-05
AK083429_1(AK083429|pid:none) Mus musculus 9 days embryo whole b... 49 6e-05
AK056758_1(AK056758|pid:none) Homo sapiens cDNA FLJ32196 fis, cl... 49 6e-05
AF038602_1(AF038602|pid:none) Homo sapiens CD2 binding protein 1... 49 6e-05
BC039163_1(BC039163|pid:none) Mus musculus sorbin and SH3 domain... 49 6e-05
AM393267_1(AM393267|pid:none) Synthetic construct Homo sapiens c... 49 6e-05
(Q3UTJ2) RecName: Full=Sorbin and SH3 domain-containing protein ... 49 6e-05
AF049884_1(AF049884|pid:none) Homo sapiens Arg/Abl-interacting p... 49 6e-05
A48063(A48063) mammary tumor/squamous cell carcinoma-associated ... 49 6e-05
(Q6TXD4) RecName: Full=Dynamin-binding protein; AltName: Full=Sc... 49 6e-05
(A5D8S5) RecName: Full=Putative E3 ubiquitin-protein ligase SH3R... 49 6e-05
BC141794_1(BC141794|pid:none) Danio rerio SH3 multiple domains 2... 49 6e-05
AM393127_1(AM393127|pid:none) Synthetic construct Homo sapiens c... 49 6e-05
AM393172_1(AM393172|pid:none) Synthetic construct Homo sapiens c... 49 6e-05
(A7A261) RecName: Full=LAS seventeen-binding protein 3; ... 49 7e-05
(P16885) RecName: Full=1-phosphatidylinositol-4,5-bisphosphate p... 49 7e-05
(O35413) RecName: Full=Sorbin and SH3 domain-containing protein ... 49 7e-05
BC007565_1(BC007565|pid:none) Homo sapiens phospholipase C, gamm... 49 7e-05
AF039047_15(AF039047|pid:none) Caenorhabditis elegans cosmid K11... 49 7e-05
(P97306) RecName: Full=SH3 and cysteine-rich domain-containing p... 49 7e-05
AK165555_1(AK165555|pid:none) Mus musculus bladder RCB-0544 MBT-... 49 7e-05
AM393056_1(AM393056|pid:none) Synthetic construct Homo sapiens c... 49 7e-05
AK140498_1(AK140498|pid:none) Mus musculus 10 days neonate cereb... 49 7e-05
BC045942_1(BC045942|pid:none) Danio rerio SH3-domain GRB2-like 1... 49 7e-05
AK304722_1(AK304722|pid:none) Homo sapiens cDNA FLJ57018 complet... 49 7e-05
(Q5BBL4) RecName: Full=Class E vacuolar protein-sorting machiner... 49 7e-05
AB208914_1(AB208914|pid:none) Homo sapiens mRNA for 1-phosphatid... 49 7e-05
AK092877_1(AK092877|pid:none) Homo sapiens cDNA FLJ35558 fis, cl... 49 7e-05
(Q01406) RecName: Full=Src substrate protein p85; AltName: Full=... 49 7e-05
BC081178_1(BC081178|pid:none) Xenopus laevis MGC84356 protein, m... 49 7e-05
(Q5XHY7) RecName: Full=Signal transducing adapter molecule 2; ... 49 7e-05
AM393034_1(AM393034|pid:none) Synthetic construct Homo sapiens c... 49 7e-05
(P53281) RecName: Full=LAS seventeen-binding protein 1; ... 49 7e-05
AK084249_1(AK084249|pid:none) Mus musculus 12 days embryo eyebal... 49 7e-05
(Q8BZ71) RecName: Full=SH3 and cysteine-rich domain-containing p... 48 1e-04
DQ214657_1(DQ214657|pid:none) Taeniopygia guttata clone 0058P004... 48 1e-04
BC019654_1(BC019654|pid:none) Mus musculus phospholipase C, gamm... 48 1e-04
BC061676_1(BC061676|pid:none) Xenopus laevis hypothetical protei... 48 1e-04
AC116986_64(AC116986|pid:none) Dictyostelium discoideum chromoso... 48 1e-04
(Q8CIH5) RecName: Full=1-phosphatidylinositol-4,5-bisphosphate p... 48 1e-04
BC149101_1(BC149101|pid:none) Bos taurus hypothetical LOC504513,... 48 1e-04
CR382134_370(CR382134|pid:none) Debaryomyces hansenii strain CBS... 48 1e-04
AY814057_1(AY814057|pid:none) Schistosoma japonicum SJCHGC01831 ... 48 1e-04
(P24135) RecName: Full=1-phosphatidylinositol-4,5-bisphosphate p... 48 1e-04
AB179358_1(AB179358|pid:none) Macaca fascicularis testis cDNA cl... 48 1e-04
AK299750_1(AK299750|pid:none) Homo sapiens cDNA FLJ52274 complet... 48 1e-04
BX537102_4(BX537102|pid:none) Zebrafish DNA sequence from clone ... 48 1e-04
DQ656109_1(DQ656109|pid:none) Danio rerio Rho guanine exchange f... 48 1e-04
BC124378_1(BC124378|pid:none) Danio rerio zgc:153534, mRNA (cDNA... 48 1e-04
AE017342_63(AE017342|pid:none) Cryptococcus neoformans var. neof... 48 1e-04
(Q6BNP6) RecName: Full=Class E vacuolar protein-sorting machiner... 48 1e-04
(A6H7G2) RecName: Full=Drebrin-like protein; &BC146234_1(BC1462... 47 2e-04
AF251442_1(AF251442|pid:none) Homo sapiens mixed lineage kinase ... 47 2e-04
U94778_1(U94778|pid:none) Human PEST phosphatase interacting pro... 47 2e-04
BC166366_1(BC166366|pid:none) Xenopus tropicalis SH3-domain kina... 47 2e-04
(Q62415) RecName: Full=Apoptosis-stimulating of p53 protein 1; A... 47 2e-04
AY889306_1(AY889306|pid:none) Synthetic construct Homo sapiens c... 47 2e-04
AB027611_1(AB027611|pid:none) Xenopus laevis mRNA for cortactin,... 47 2e-04
AB192469_1(AB192469|pid:none) Oncorhynchus mykiss p67phox mRNA f... 47 2e-04
CR857230_1(CR857230|pid:none) Pongo abelii mRNA; cDNA DKFZp469M1... 47 2e-04
AK299092_1(AK299092|pid:none) Homo sapiens cDNA FLJ51051 complet... 47 2e-04
BX001002_2(BX001002|pid:none) Zebrafish DNA sequence from clone ... 47 2e-04
AK299688_1(AK299688|pid:none) Homo sapiens cDNA FLJ51072 complet... 47 2e-04
(Q4P5J4) RecName: Full=Class E vacuolar protein-sorting machiner... 47 2e-04
(Q7ZXQ9) RecName: Full=Drebrin-like protein A; &BC044296_1(BC04... 47 2e-04
CR857714_1(CR857714|pid:none) Pongo abelii mRNA; cDNA DKFZp459H1... 47 2e-04
AK299824_1(AK299824|pid:none) Homo sapiens cDNA FLJ59236 complet... 47 2e-04
(Q4WHP5) RecName: Full=Class E vacuolar protein-sorting machiner... 47 2e-04
X95677_1(X95677|pid:none) H.sapiens mRNA for ArgBPIB protein. 47 2e-04
FN392322_209(FN392322|pid:none) Pichia pastoris GS115 chromosome... 47 2e-04
AK302853_1(AK302853|pid:none) Homo sapiens cDNA FLJ51162 complet... 47 2e-04
AK316343_1(AK316343|pid:none) Homo sapiens cDNA, FLJ79242 comple... 47 2e-04
BC169873_1(BC169873|pid:none) Xenopus laevis cortactin, mRNA (cD... 47 2e-04
(Q07883) RecName: Full=Growth factor receptor-bound protein 2; A... 47 2e-04
EF043786_1(EF043786|pid:none) Synthetic construct clone ATCC 106... 47 2e-04
A56561(A56561;S27946) 35K proline-rich protein xlan4 - African c... 47 2e-04
BC111407_1(BC111407|pid:none) Homo sapiens mitogen-activated pro... 47 2e-04
BC072135_1(BC072135|pid:none) Xenopus laevis animal 4, mRNA (cDN... 47 2e-04
(Q96KQ4) RecName: Full=Apoptosis-stimulating of p53 protein 1; A... 47 2e-04
U58881_1(U58881|pid:none) Mus musculus p53 binding protein 2 hom... 47 2e-04
AL935282_2(AL935282|pid:none) Zebrafish DNA sequence from clone ... 47 2e-04
AB018314_1(AB018314|pid:none) Homo sapiens mRNA for KIAA0771 pro... 47 2e-04
AK053843_1(AK053843|pid:none) Mus musculus 0 day neonate eyeball... 47 2e-04
BC053732_1(BC053732|pid:none) Mus musculus protein phosphatase 1... 47 2e-04
EF215154_1(EF215154|pid:none) Callithrix jacchus clone I10-44.3_... 47 2e-04
(Q0CJU8) RecName: Full=Class E vacuolar protein-sorting machiner... 47 2e-04
CR457167_1(CR457167|pid:none) Homo sapiens full open reading fra... 47 2e-04
AB170106_1(AB170106|pid:none) Macaca fascicularis brain cDNA clo... 47 2e-04
AK293698_1(AK293698|pid:none) Homo sapiens cDNA FLJ59481 complet... 47 2e-04
BC011677_1(BC011677|pid:none) Homo sapiens drebrin-like, mRNA (c... 47 2e-04
AK296778_1(AK296778|pid:none) Homo sapiens cDNA FLJ54071 complet... 47 2e-04
AB209486_1(AB209486|pid:none) Homo sapiens mRNA for Drebrin-like... 47 2e-04
AB038364_1(AB038364|pid:none) Rattus norvegicus mRNA for SH3P7r4... 47 2e-04
AJ719327_1(AJ719327|pid:none) Gallus gallus mRNA for hypothetica... 47 2e-04
AB039818_1(AB039818|pid:none) Rattus norvegicus mRNA for SH3P7r2... 47 2e-04
AK168898_1(AK168898|pid:none) Mus musculus 16 days embryo kidney... 47 2e-04
(Q9JHL4) RecName: Full=Drebrin-like protein; AltName: Full=SH3 d... 47 2e-04
AK293151_1(AK293151|pid:none) Homo sapiens cDNA FLJ59450 complet... 47 2e-04
BC059450_1(BC059450|pid:none) Danio rerio growth factor receptor... 47 2e-04
(Q80WP1) RecName: Full=Drebrin-like protein; AltName: Full=SH3 d... 47 2e-04
(Q9UJU6) RecName: Full=Drebrin-like protein; AltName: Full=Drebr... 47 2e-04
CR382130_562(CR382130|pid:none) Yarrowia lipolytica strain CLIB1... 47 2e-04
AF218020_1(AF218020|pid:none) Homo sapiens PP5423 mRNA, complete... 47 2e-04
AK153389_1(AK153389|pid:none) Mus musculus bone marrow macrophag... 47 2e-04
AB039819_1(AB039819|pid:none) Rattus norvegicus mRNA for SH3P7r3... 47 2e-04
FN357303_47(FN357303|pid:none) Schistosoma mansoni genome sequen... 47 2e-04
T29005(T29005)hypothetical protein ZK328.3 - Caenorhabditis eleg... 47 2e-04
AE016819_553(AE016819|pid:none) Ashbya gossypii (= Eremothecium ... 47 2e-04
AB040151_1(AB040151|pid:none) Homo sapiens mRNA for hNap1 Bindin... 47 3e-04
BC109231_1(BC109231|pid:none) Homo sapiens SH3 and cysteine rich... 47 3e-04
FJ380058_1(FJ380058|pid:none) Homo sapiens abl-interactor 1 vari... 47 3e-04
BC134444_1(BC134444|pid:none) Bos taurus SH3-domain kinase bindi... 47 3e-04
(Q8R551) RecName: Full=SH3 domain-containing kinase-binding prot... 47 3e-04
AF540955_1(AF540955|pid:none) Homo sapiens Abl-interactor 1 (SSH... 47 3e-04
U87166_1(U87166|pid:none) Homo sapiens spectrin SH3 domain bindi... 47 3e-04
AK292312_1(AK292312|pid:none) Homo sapiens cDNA FLJ78625 complet... 47 3e-04
AK151363_1(AK151363|pid:none) Mus musculus bone marrow macrophag... 47 3e-04
AK038540_1(AK038540|pid:none) Mus musculus adult male hypothalam... 47 3e-04
AB290331_1(AB290331|pid:none) Cyprinus carpio p67phox mRNA for n... 47 3e-04
AF472327_2(AF472327|pid:none) Mus musculus Ruk protein (Sh3kbp1)... 47 3e-04
BC086736_1(BC086736|pid:none) Danio rerio Rho guanine nucleotide... 47 3e-04
AF420251_1(AF420251|pid:none) Mus musculus abelson interactor 1 ... 47 3e-04
AL139404_8(AL139404|pid:none) Human DNA sequence from clone RP11... 47 3e-04
(Q96B97) RecName: Full=SH3 domain-containing kinase-binding prot... 47 3e-04
AK165924_1(AK165924|pid:none) Mus musculus lung RCB-0558 LLC cDN... 47 3e-04
AB179299_1(AB179299|pid:none) Macaca fascicularis testis cDNA cl... 47 3e-04
A68194_1(A68194|pid:none) Sequence 1 from Patent WO9749808. 47 3e-04
AL732327_4(AL732327|pid:none) Human DNA sequence from clone RP11... 47 3e-04
CS300519_1(CS300519|pid:none) Sequence 27 from Patent EP1661986. 47 3e-04
BC052863_1(BC052863|pid:none) Mus musculus SH3-domain kinase bin... 47 3e-04
AF542051_1(AF542051|pid:none) Homo sapiens CD2 binding protein C... 47 3e-04
AB209268_1(AB209268|pid:none) Homo sapiens mRNA for Abl-interact... 47 3e-04
AB220488_1(AB220488|pid:none) Macaca fascicularis mRNA, clone Qm... 47 3e-04
BC162578_1(BC162578|pid:none) Danio rerio cortactin, mRNA (cDNA ... 47 3e-04
AK020782_1(AK020782|pid:none) Mus musculus 0 day neonate thymus ... 47 3e-04
AL117204_39(AL117204|pid:none) Caenorhabditis elegans YAC Y116A8... 47 3e-04
FN357672_2(FN357672|pid:none) Schistosoma mansoni genome sequenc... 47 3e-04
AK167568_1(AK167568|pid:none) Mus musculus 11 days pregnant adul... 47 3e-04
AK026507_1(AK026507|pid:none) Homo sapiens cDNA: FLJ22854 fis, c... 47 3e-04
BC085549_1(BC085549|pid:none) Danio rerio zgc:103549, mRNA (cDNA... 47 3e-04
BC015806_1(BC015806|pid:none) Homo sapiens SH3-domain kinase bin... 47 3e-04
AL845257_3(AL845257|pid:none) Mouse DNA sequence from clone RP23... 47 3e-04
AF255888_1(AF255888|pid:none) Rattus norvegicus adapter protein ... 47 3e-04
(Q925Q9) RecName: Full=SH3 domain-containing kinase-binding prot... 47 3e-04
(Q96HL8) RecName: Full=SH3 domain-containing YSC84-like protein ... 47 3e-04
T31504(T31504)hypothetical protein Y116A8C.36 - Caenorhabditis e... 47 3e-04
AY815351_1(AY815351|pid:none) Schistosoma japonicum SJCHGC02119 ... 47 3e-04
AK079357_1(AK079357|pid:none) Mus musculus 16 days neonate cereb... 47 3e-04
AF006516_1(AF006516|pid:none) Homo sapiens eps8 binding protein ... 47 3e-04
BC082699_1(BC082699|pid:none) Xenopus laevis hypothetical LOC494... 47 3e-04
AL845257_5(AL845257|pid:none) Mouse DNA sequence from clone RP23... 47 3e-04
AK126803_1(AK126803|pid:none) Homo sapiens cDNA FLJ44853 fis, cl... 47 3e-04
BC084795_1(BC084795|pid:none) Xenopus laevis hypothetical LOC495... 47 3e-04
BC157764_1(BC157764|pid:none) Xenopus tropicalis abl interactor ... 47 3e-04
BC129092_1(BC129092|pid:none) Rattus norvegicus abl-interactor 1... 47 3e-04
AL139404_6(AL139404|pid:none) Human DNA sequence from clone RP11... 47 3e-04
BC171128_1(BC171128|pid:none) Xenopus tropicalis abl interactor ... 47 3e-04
(Q6NRD3) RecName: Full=Putative E3 ubiquitin-protein ligase SH3R... 47 3e-04
AK296751_1(AK296751|pid:none) Homo sapiens cDNA FLJ52931 complet... 47 3e-04
BC029794_1(BC029794|pid:none) Mus musculus SH3 and cysteine rich... 47 3e-04
(Q8AXV0) RecName: Full=Endophilin-A2; AltName: Full=Endophilin-2... 47 3e-04
AL732325_2(AL732325|pid:none) Human DNA sequence from clone RP11... 47 3e-04
(Q6GM14) RecName: Full=Drebrin-like protein B; &BC074277_1(BC07... 47 3e-04
BC079642_1(BC079642|pid:none) Mus musculus abl-interactor 1, mRN... 47 3e-04
AL929452_4(AL929452|pid:none) Mouse DNA sequence from clone RP23... 47 3e-04
FJ380059_1(FJ380059|pid:none) Homo sapiens abl-interactor 1 vari... 47 3e-04
AL808129_2(AL808129|pid:none) Zebrafish DNA sequence from clone ... 46 4e-04
(Q5RBR0) RecName: Full=Putative E3 ubiquitin-protein ligase SH3R... 46 4e-04
BC060647_1(BC060647|pid:none) Mus musculus FCH and double SH3 do... 46 4e-04
U80955_10(U80955|pid:none) Caenorhabditis elegans cosmid T04C9, ... 46 4e-04
AK021429_1(AK021429|pid:none) Homo sapiens cDNA FLJ11367 fis, cl... 46 4e-04
AK173185_1(AK173185|pid:none) Mus musculus mRNA for mKIAA1494 pr... 46 4e-04
CR382128_547(CR382128|pid:none) Yarrowia lipolytica strain CLIB1... 46 4e-04
BC167645_1(BC167645|pid:none) Xenopus tropicalis cortactin, mRNA... 46 4e-04
(P34416) RecName: Full=LIM and SH3 domain protein F42H10.3; &L0... 46 4e-04
BC143969_1(BC143969|pid:none) Homo sapiens vav 3 guanine nucleot... 46 4e-04
U94904_1(U94904|pid:none) Rattus norvegicus thyroid hormone resp... 46 4e-04
AF304353_1(AF304353|pid:none) Lampetra fluviatilis endophilin SH... 46 4e-04
BC053671_1(BC053671|pid:none) Homo sapiens SH3 domain containing... 46 4e-04
AK304088_1(AK304088|pid:none) Homo sapiens cDNA FLJ54045 complet... 46 4e-04
AF230520_1(AF230520|pid:none) Rattus norvegicus SH3 domain-conta... 46 4e-04
(Q3USJ8) RecName: Full=FCH and double SH3 domains protein 2; Alt... 46 4e-04
(Q8AXU9) RecName: Full=Endophilin-A3; AltName: Full=Endophilin-3... 46 4e-04
AF118886_1(AF118886|pid:none) Homo sapiens VAV-3 protein beta is... 46 4e-04
AK122368_1(AK122368|pid:none) Mus musculus mRNA for mKIAA0769 pr... 46 4e-04
AB174622_1(AB174622|pid:none) Macaca fascicularis brain cDNA clo... 46 4e-04
AK296376_1(AK296376|pid:none) Homo sapiens cDNA FLJ60613 complet... 46 4e-04
AK300474_1(AK300474|pid:none) Homo sapiens cDNA FLJ54061 complet... 46 4e-04
(Q9UKW4) RecName: Full=Guanine nucleotide exchange factor VAV3; ... 46 4e-04
(Q69ZI1) RecName: Full=Putative E3 ubiquitin-protein ligase SH3R... 46 4e-04
AL513206_2(AL513206|pid:none) Human DNA sequence from clone RP11... 46 4e-04
AY358478_1(AY358478|pid:none) Homo sapiens clone DNA73401 QLAK73... 46 4e-04
AK140322_1(AK140322|pid:none) Mus musculus 4 days neonate male a... 46 4e-04
BC017751_1(BC017751|pid:none) Homo sapiens FCH and double SH3 do... 46 4e-04
AE017347_378(AE017347|pid:none) Cryptococcus neoformans var. neo... 46 5e-04
(Q66II3) RecName: Full=Growth factor receptor-bound protein 2; A... 46 5e-04
X62852_1(X62852|pid:none) H.sapiens ash mRNA. 46 5e-04
BT023889_1(BT023889|pid:none) Drosophila melanogaster RE03775 fu... 46 5e-04
BC135450_1(BC135450|pid:none) Xenopus tropicalis BAI1-associated... 46 5e-04
(Q60631) RecName: Full=Growth factor receptor-bound protein 2; A... 46 5e-04
(Q9R1Z8) RecName: Full=Vinexin; AltName: Full=Sorbin and SH3 dom... 46 5e-04
AE013599_2174(AE013599|pid:none) Drosophila melanogaster chromos... 46 5e-04
AY812038_1(AY812038|pid:none) Schistosoma japonicum SJCHGC01829 ... 46 5e-04
AY812778_1(AY812778|pid:none) Schistosoma japonicum clone SJCHGC... 46 5e-04
AB190911_1(AB190911|pid:none) Mus musculus mRNA for vinexin-g, c... 46 5e-04
FN357332_9(FN357332|pid:none) Schistosoma mansoni genome sequenc... 46 5e-04
(Q3SZ01) RecName: Full=SH3 domain-containing YSC84-like protein ... 46 5e-04
BT025352_1(BT025352|pid:none) Bos taurus SH3-domain GRB2-like 1 ... 46 5e-04
(P47808) RecName: Full=High molecular weight form of myosin-1; A... 46 5e-04
AY890715_1(AY890715|pid:none) Synthetic construct Homo sapiens c... 46 5e-04
L29511_1(L29511|pid:none) Human GRB2 isoform mRNA. 46 5e-04
BC079926_1(BC079926|pid:none) Xenopus tropicalis abl-interactor ... 46 5e-04
AK139337_1(AK139337|pid:none) Mus musculus 10 days neonate corte... 46 5e-04
(Q2KJA1) RecName: Full=Endophilin-A2; AltName: Full=Endophilin-2... 46 5e-04
(Q62420) RecName: Full=Endophilin-A1; AltName: Full=Endophilin-1... 46 5e-04
AL008637_4(AL008637|pid:none) Human DNA sequence from clone CTA-... 46 5e-04
A23662(A23662)myosin I, high molecular weight - Acanthamoeba sp. 46 5e-04
T18289(T18289) racGAP protein - slime mold (Dictyostelium discoi... 46 5e-04
(O35179) RecName: Full=Endophilin-A1; AltName: Full=Endophilin-1... 46 5e-04
AK293592_1(AK293592|pid:none) Homo sapiens cDNA FLJ54594 complet... 45 6e-04
DQ894444_1(DQ894444|pid:none) Synthetic construct Homo sapiens c... 45 6e-04
BC106271_1(BC106271|pid:none) Xenopus laevis hypothetical protei... 45 6e-04
CU633897_205(CU633897|pid:none) Podospora anserina genomic DNA c... 45 6e-04
BC083666_1(BC083666|pid:none) Rattus norvegicus sorbin and SH3 d... 45 6e-04
BC152821_1(BC152821|pid:none) Synthetic construct Mus musculus c... 45 6e-04
AB463232_1(AB463232|pid:none) Synthetic construct DNA, clone: pF... 45 6e-04
EF043893_1(EF043893|pid:none) Synthetic construct clone ATCC 106... 45 6e-04
AC007292_3(AC007292|pid:none) Homo sapiens chromosome 19, cosmid... 45 6e-04
AK147053_1(AK147053|pid:none) Mus musculus 17 days embryo stomac... 45 6e-04
BT058722_1(BT058722|pid:none) Salmo salar clone ssal-rgf-001-079... 45 6e-04
BX641152_1(BX641152|pid:none) Homo sapiens mRNA; cDNA DKFZp686I1... 45 6e-04
AK122245_1(AK122245|pid:none) Mus musculus mRNA for mKIAA0318 pr... 45 6e-04
BC000089_1(BC000089|pid:none) Homo sapiens SH3-domain GRB2-like ... 45 6e-04
U89775_1(U89775|pid:none) Xenopus laevis SH2/SH3 adaptor Grb2 (G... 45 6e-04
(Q99961) RecName: Full=Endophilin-A2; AltName: Full=Endophilin-2... 45 6e-04
AK142173_1(AK142173|pid:none) Mus musculus 13 days embryo heart ... 45 6e-04
AB174135_1(AB174135|pid:none) Macaca fascicularis brain cDNA clo... 45 6e-04
AL671987_2(AL671987|pid:none) Mouse DNA sequence from clone RP23... 45 6e-04
BC010146_1(BC010146|pid:none) Homo sapiens sorbin and SH3 domain... 45 6e-04
BC148110_1(BC148110|pid:none) Bos taurus sorbin and SH3 domain c... 45 6e-04
AK293546_1(AK293546|pid:none) Homo sapiens cDNA FLJ53715 complet... 45 6e-04
BC154284_1(BC154284|pid:none) Danio rerio zgc:91999, mRNA (cDNA ... 45 6e-04
AY888447_1(AY888447|pid:none) Synthetic construct Homo sapiens c... 45 6e-04

>AC117070_15(AC117070|pid:none) Dictyostelium discoideum chromosome
2 map 2097701-2233941 strain AX4, complete sequence.
&AC123513_20(AC123513|pid:none)
Length = 389

Score = 207 bits (528), Expect = 7e-53
Identities = 105/138 (76%), Positives = 105/138 (76%)
Frame = +3

Query: 3 QIDKLEDIHCFVRESRTGTEKPPPPQFISFGGKSSSDYIQNKASYXXXXXXXXXXXXXXX 182
QIDKLEDIHCFVRESRTGTEKPPPPQFISFGGKSSSDYIQNKASY
Sbjct: 252 QIDKLEDIHCFVRESRTGTEKPPPPQFISFGGKSSSDYIQNKASYSAPLTSSVSSNSLTS 311

Query: 183 XXXXXXXXXXXXXXXXXINLSKKKQAKALYDYVGSDATELDFFAGDIITILDEDESGWFR 362
INLSKK QAKALYDYVGSDATELDFFAGDIITILDEDESGWFR
Sbjct: 312 SYNSATTTPTPAPRSTPINLSKKNQAKALYDYVGSDATELDFFAGDIITILDEDESGWFR 371

Query: 363 GELGDRIGLYPSNYCEPI 416
GELGDRIGLYPSNYCEPI
Sbjct: 372 GELGDRIGLYPSNYCEPI 389

Lambda K H
0.318 0.134 0.401

Gapped
Lambda K H
0.267 0.0410 0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3268448
Number of Hits to DB: 554,645,474
Number of extensions: 7915978
Number of successful extensions: 32269
Number of sequences better than 10.0: 1618
Number of HSP's gapped: 31715
Number of HSP's successfully gapped: 2135
Length of query: 159
Length of database: 1,061,185,681
Length adjustment: 118
Effective length of query: 41
Effective length of database: 675,508,817
Effective search space: 27695861497
Effective search space used: 27695861497
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 30 (16.2 bits)

PSORT

psg: 0.75 gvh: 0.48 alm: 0.48 top: 0.53 tms: 0.00 mit: 0.17 mip: 0.00
nuc: 0.00 erl: 0.00 erm: 0.00 pox: 0.00 px2: 0.00 vac: 0.00 rnp: 0.00
act: 0.00 caa: 0.00 yqr: 0.00 tyr: 0.00 leu: 0.00 gpi: 0.00 myr: 0.00
dna: 0.00 rib: 0.00 bac: 0.00 m1a: 0.00 m1b: 0.00 m2 : 0.00 mNt: 0.00
m3a: 0.00 m3b: 0.00 m_ : 1.00

40.0 %: cytoplasmic
24.0 %: nuclear
12.0 %: cytoskeletal
8.0 %: mitochondrial
4.0 %: Golgi
4.0 %: vacuolar
4.0 %: vesicles of secretory system
4.0 %: endoplasmic reticulum

>> prediction for Contig-U05629-1 is cyt

VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 0
SS (DIR, S) 1
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0