NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | 利用許諾 | ヘルプ
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
Dicty_cDB
Contig List | Clone List | cDNA Library List
Atlas
Atlas | Atlas Image List
Contig-U01201-1
Contig ID Contig-U01201-1
Contig update 2001. 8.29
Contig sequence 
>Contig-U01201-1 (Contig-U01201-1Q) /CSM_Contig/Contig-U01201-1Q.Seq.d
CTTCTACATCAACTACTACAACAAAGATAAATGGCACCTCTAGTAGTAGT
AGTAATAGTGGTAGCAGTAGTATTAGTAAAAAAGCAGAAAAAGAATTAAA
GGAACAAGAGAAACAAAAAATAAAAGAGTTGATGGATACCTTAAAATCAA
AACAATTAACACCAGATCAAGAAAAAGCAATTAAATCACAAATTAAGCAA
CTCAAGAAAGAAAAAAGACAAAAGAAAGAAGAAAAGAAATTAGCAAAAAG
ATTAAAAGAAAAAGAAAAAGAAAGTAAATCAAAATCATCAACATCAACAT
CATCATCTA----------GAAAATATTGAATCAATTGAAGAGCAAAGGG
TAGTAGTAGTATATCATAATGAAGAATCGTCTAACAATGGTAGCAGTAAT
AATACCGAATGTAATAATAGTAAAATAAATGATGAATCATCAACTAACAC
CCCAACCACCTCAACCACCACAGCAACAAAGAAGAAAGGAGTAAATCATA
ATGTTGGACATATTATATCACTATGTATTGAAATTACCCATATCGTTAAC
AAGAGTAAAGGTCAATTGCTTAGAGATATTGTTGATGAATGTTGCCTATT
CCAAGGTCAATGGGATGAAGTTGTTGTACCAAAATTACGTCAAGAAATAT
CATTTAGAAATATCAAACCAATTGGTACCGTTTCAATGCGTAAAGGTAGA
AAGGGTGCTCCACCAACGCCATTTGCAAATGTTGAATCTTTCCAAAATAT
GGCAAATGGTGTTCCAATTCCTCCAACAAATCCTTCCTCAAAATTCTTTT
TCTAAAAATATAATAATAATAATAATATAATAAAAAAACAAAACAAAAAA
CAAAAACAAAAATATAATAAACAAAAAAG
Gap gap included
Contig length 869
Chromosome number (1..6, M) 2
Chromosome length 8467578
Start point 815175
End point 816045
Strand (PLUS/MINUS) PLUS
Number of clones 2
Number of EST 3
Link to clone list U01201
List of clone(s) 

est1=SLD224F,1,310
est2=SLE546Z,311,863
est3=SLD224Z,388,871
Translated Amino Acid sequence 
STSTTTTKINGTSSSSSNSGSSSISKKAEKELKEQEKQKIKELMDTLKSKQLTPDQEKAI
KSQIKQLKKEKRQKKEEKKLAKRLKEKEKESKSKSSTSTSSS---

---ENIESIEEQRVVVVYHNEESSNNGSSNNTECNNSKINDESSTNTPTTSTTTATKKKG
VNHNVGHIISLCIEITHIVNKSKGQLLRDIVDECCLFQGQWDEVVVPKLRQEISFRNIKP
IGTVSMRKGRKGAPPTPFANVESFQNMANGVPIPPTNPSSKFFF*kynnnnniikkqnkk
qkqkynkqk
Translated Amino Acid sequence (All Frames) 
Frame A:
llhqllqqr*maplvvvvivvavvlvkkqkkn*rnkrnkk*ks*wip*nqnn*hqikkkq
lnhklsnsrkkkdkrkkkrn*qkd*kkkkkkvnqnhqhqhhhl---

---ENIESIEEQRVVVVYHNEESSNNGSSNNTECNNSKINDESSTNTPTTSTTTATKKKG
VNHNVGHIISLCIEITHIVNKSKGQLLRDIVDECCLFQGQWDEVVVPKLRQEISFRNIKP
IGTVSMRKGRKGAPPTPFANVESFQNMANGVPIPPTNPSSKFFF*kynnnnniikkqnkk
qkqkynkqk

Frame B:
fyinyynkdkwhl******w*q*y**ksrkrikgtretknkrvdgylkiktintrsrksn
*itn*atqerkktkerrkeiskkikrkrkrk*ikiininiii---

---kilnqlkskg***yiimknrltmvaviipnviivk*mmnhqltpqppqppqqqrrke
*iimldilyhyvlklpisltrvkvncleillmnvayskvngmkllyqnyvkkyhleisnq
lvpfqcvkvervlhqrhlqmlnlskiwqmvfqflqqilpqnsfskniiiiii**knktkn
knkniinkk

Frame C:
STSTTTTKINGTSSSSSNSGSSSISKKAEKELKEQEKQKIKELMDTLKSKQLTPDQEKAI
KSQIKQLKKEKRQKKEEKKLAKRLKEKEKESKSKSSTSTSSS---

---ky*in*rakgsssis**riv*qw*q**yrm****nk**iin*hpnhlnhhsnkeers
ks*cwtyyitmy*nypyr*qe*rsia*ryc**mlpiprsmg*scctkitsrnii*kyqtn
wyrfna*r*kgcstnaickc*ifpkygkwcsnssnksflkilflki*****ynkktkqkt
ktki**tkk
own update 2004. 6. 7
Homology vs CSM-cDNA 
Query= Contig-U01201-1 (Contig-U01201-1Q)
/CSM_Contig/Contig-U01201-1Q.Seq.d
         (879 letters)

Database: CSM
           8361 sequences; 7,895,291 total letters


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

Contig-U01201-1 (Contig-U01201-1Q) /CSM_Contig/Conti...   965  0.0
Contig-U13925-1 (Contig-U13925-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U13627-1 (Contig-U13627-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U05197-1 (Contig-U05197-1Q) /CSM_Contig/Conti...    40  0.006
Contig-U11815-1 (Contig-U11815-1Q) /CSM_Contig/Conti...    38  0.022
Contig-U14528-1 (Contig-U14528-1Q) /CSM_Contig/Conti...    36  0.086
Contig-U13655-1 (Contig-U13655-1Q) /CSM_Contig/Conti...    36  0.086
Contig-U13235-1 (Contig-U13235-1Q) /CSM_Contig/Conti...    36  0.086
Contig-U12169-1 (Contig-U12169-1Q) /CSM_Contig/Conti...    36  0.086
Contig-U10798-1 (Contig-U10798-1Q) /CSM_Contig/Conti...    36  0.086

>Contig-U01201-1 (Contig-U01201-1Q) /CSM_Contig/Contig-U01201-1Q.Seq.d
          Length = 879

 Score =  965 bits (487), Expect = 0.0
 Identities = 487/487 (100%)
 Strand = Plus / Plus

                                                                       
Query: 320 gaaaatattgaatcaattgaagagcaaagggtagtagtagtatatcataatgaagaatcg 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gaaaatattgaatcaattgaagagcaaagggtagtagtagtatatcataatgaagaatcg 379

                                                                       
Query: 380 tctaacaatggtagcagtaataataccgaatgtaataatagtaaaataaatgatgaatca 439
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctaacaatggtagcagtaataataccgaatgtaataatagtaaaataaatgatgaatca 439

                                                                       
Query: 440 tcaactaacaccccaaccacctcaaccaccacagcaacaaagaagaaaggagtaaatcat 499
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcaactaacaccccaaccacctcaaccaccacagcaacaaagaagaaaggagtaaatcat 499

                                                                       
Query: 500 aatgttggacatattatatcactatgtattgaaattacccatatcgttaacaagagtaaa 559
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aatgttggacatattatatcactatgtattgaaattacccatatcgttaacaagagtaaa 559

                                                                       
Query: 560 ggtcaattgcttagagatattgttgatgaatgttgcctattccaaggtcaatgggatgaa 619
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggtcaattgcttagagatattgttgatgaatgttgcctattccaaggtcaatgggatgaa 619

                                                                       
Query: 620 gttgttgtaccaaaattacgtcaagaaatatcatttagaaatatcaaaccaattggtacc 679
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gttgttgtaccaaaattacgtcaagaaatatcatttagaaatatcaaaccaattggtacc 679

                                                                       
Query: 680 gtttcaatgcgtaaaggtagaaagggtgctccaccaacgccatttgcaaatgttgaatct 739
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtttcaatgcgtaaaggtagaaagggtgctccaccaacgccatttgcaaatgttgaatct 739

                                                                       
Query: 740 ttccaaaatatggcaaatggtgttccaattcctccaacaaatccttcctcaaaattcttt 799
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttccaaaatatggcaaatggtgttccaattcctccaacaaatccttcctcaaaattcttt 799

                  
Query: 800 ttctaaa 806
           |||||||
Sbjct: 800 ttctaaa 806


 Score = 79.8 bits (40), Expect = 6e-15
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                  
Query: 1  cttctacatcaactactacaacaaagataaatggcacctc 40
          ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  cttctacatcaactactacaacaaagataaatggcacctc 40


 Score = 71.9 bits (36), Expect = 2e-12
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                               
Query: 128 gttgatggataccttaaaatcaaaacaattaacacc 163
           ||||||||||||||||||||||||||||||||||||
Sbjct: 128 gttgatggataccttaaaatcaaaacaattaacacc 163


>Contig-U13925-1 (Contig-U13925-1Q) /CSM_Contig/Contig-U13925-1Q.Seq.d
          Length = 1417

 Score = 40.1 bits (20), Expect = 0.006
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 3   tctacatcaactactacaac 22
           ||||||||||||||||||||
Sbjct: 278 tctacatcaactactacaac 297


 Score = 30.2 bits (15), Expect = 5.3
 Identities = 15/15 (100%)
 Strand = Plus / Plus

                          
Query: 10  caactactacaacaa 24
           |||||||||||||||
Sbjct: 294 caactactacaacaa 308


>Contig-U13627-1 (Contig-U13627-1Q) /CSM_Contig/Contig-U13627-1Q.Seq.d
          Length = 707

 Score = 40.1 bits (20), Expect = 0.006
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 320 gaaaatattgaatcaattgaaga 342
           |||||||||||||| ||||||||
Sbjct: 674 gaaaatattgaatcnattgaaga 696


  Database: CSM
    Posted date:  Jun 7, 2004  8:33 AM
  Number of letters in database: 7,895,291
  Number of sequences in database:  8361
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,499
Number of Sequences: 8361
Number of extensions: 11499
Number of successful extensions: 1397
Number of sequences better than 10.0: 160
length of query: 879
length of database: 7,895,291
effective HSP length: 16
effective length of query: 863
effective length of database: 7,761,515
effective search space: 6698187445
effective search space used: 6698187445
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 15 (30.2 bits)
dna update 2009. 4.24
Homology vs DNA 
Query= Contig-U01201-1 (Contig-U01201-1Q) /CSM_Contig/Contig-U01201-1Q.Seq.d
         (879 letters)

Database: ddbj_A
           102,105,510 sequences; 101,790,757,118 total letters

Searching..................................................done

                                                             Score    E
Sequences producing significant alignments:                  (bits) Value  N

(AC117072) Dictyostelium discoideum chromosome 2 map 3879572...   940   0.0    4
(AU034822) Dictyostelium discoideum slug cDNA, clone SLE546.      946   0.0    1
(BJ347538) Dictyostelium discoideum cDNA clone:dda27k12, 3' ...   940   0.0    1
(AU052380) Dictyostelium discoideum slug cDNA, clone SLD224.      797   0.0    1
(AU061107) Dictyostelium discoideum slug cDNA, clone SLD224.       80   1e-35  3
(BJ330102) Dictyostelium discoideum cDNA clone:dda27k12, 5' ...    80   5e-35  3
(AC188529) Canis Familiaris chromosome 10, clone XX-181J11, ...    44   0.006  2
(BQ584586) E013262-024-002-E23-SP6 MPIZ-ADIS-024-inflorescen...    46   0.10   2
(EY313884) CAWX25200.fwd CAWX Helobdella robusta Primary Ear...    42   0.13   2
(DY588947) GUTF074981O3 POSSUM_01-POSSUM-GUT-2KB Trichosurus...    50   0.15   1
(AC006068) Arabidopsis thaliana chromosome 2 clone T20F21 ma...    46   0.20   4
(BQ853836) QGB21J21.yg.ab1 QG_ABCDI lettuce salinas Lactuca ...    40   0.29   2
(BU014370) QGJ7C16.yg.ab1 QG_EFGHJ lettuce serriola Lactuca ...    40   0.30   2
(BQ875896) QGI9G23.yg.ab1 QG_ABCDI lettuce salinas Lactuca s...    40   0.31   2
(BQ995767) QGG10O15.yg.ab1 QG_EFGHJ lettuce serriola Lactuca...    40   0.33   2
(EY300139) CAWX14851.rev CAWX Helobdella robusta Primary Ear...    40   0.34   2
(BQ984866) QGE5E18.yg.ab1 QG_EFGHJ lettuce serriola Lactuca ...    40   0.35   2
(BQ990812) QGF21C18.yg.ab1 QG_EFGHJ lettuce serriola Lactuca...    40   0.35   2
(BQ994887) QGF8H08.yg.ab1 QG_EFGHJ lettuce serriola Lactuca ...    40   0.36   2
(BQ982533) QGE16L05.yg.ab1 QG_EFGHJ lettuce serriola Lactuca...    40   0.36   2
(BU000032) QGG23L18.yg.ab1 QG_EFGHJ lettuce serriola Lactuca...    40   0.36   2
(AC176561) Strongylocentrotus purpuratus clone R3-3076J1, WO...    42   0.39   2
(EY292421) CAWX10546.fwd CAWX Helobdella robusta Primary Ear...    40   0.43   2
(EY323768) CAWX9187.fwd CAWX Helobdella robusta Primary Earl...    40   0.45   2
(EY317345) CAWX27515.fwd CAWX Helobdella robusta Primary Ear...    40   0.46   2
(EY317109) CAWX27384.fwd CAWX Helobdella robusta Primary Ear...    40   0.47   2
(EY308454) CAWX21039.fwd CAWX Helobdella robusta Primary Ear...    40   0.49   2
(EY297160) CAWX13208.fwd CAWX Helobdella robusta Primary Ear...    40   0.49   2
(EY317135) CAWX27400.fwd CAWX Helobdella robusta Primary Ear...    40   0.50   2
(EY305581) CAWX19448.fwd CAWX Helobdella robusta Primary Ear...    40   0.51   2
(EY301140) CAWX15415.fwd CAWX Helobdella robusta Primary Ear...    40   0.54   2
(BX936371) Zebrafish DNA sequence from clone DKEY-43K4 in li...    48   0.58   1
(AM488785) Vitis vinifera contig VV78X107865.13, whole genom...    48   0.58   1
(AM482646) Vitis vinifera contig VV78X265097.6, whole genome...    48   0.58   1
(AM480616) Vitis vinifera contig VV78X134656.4, whole genome...    48   0.58   1
(AM477036) Vitis vinifera contig VV78X158301.6, whole genome...    48   0.58   1
(AM476591) Vitis vinifera contig VV78X231700.11, whole genom...    48   0.58   1
(AM456767) Vitis vinifera, whole genome shotgun sequence, co...    48   0.58   1
(AM455393) Vitis vinifera, whole genome shotgun sequence, co...    48   0.58   1
(AM454362) Vitis vinifera contig VV78X217795.3, whole genome...    48   0.58   1
(AM435549) Vitis vinifera contig VV78X028724.4, whole genome...    48   0.58   1
(AC132558) Rattus norvegicus clone CH230-15F10, *** SEQUENCI...    48   0.58   1
(AC131559) Rattus norvegicus clone CH230-8I23, *** SEQUENCIN...    48   0.58   1
(AC111459) Rattus norvegicus clone CH230-210M9, *** SEQUENCI...    48   0.58   1
(CR847892) Zebrafish DNA sequence *** SEQUENCING CANCELLED *...    48   0.58   1
(BH182886) 021_P_16-21 SmBAC1 Schistosoma mansoni genomic cl...    48   0.58   1
(AL619837) T7 end of clone 021DH08 of library SmBAC1 from st...    48   0.58   1
(CD146106) MG1-0109T-R330-C02-U.G MG1-0109 Schistosoma manso...    48   0.58   1
(CD142789) MG1-0080M-D275-B04-U.B MG1-0080 Schistosoma manso...    48   0.58   1
(CD134467) MG1-0032T-R299-D07-U.G MG1-0032 Schistosoma manso...    48   0.58   1
(CD134447) MG1-0032T-R286-F12-U.G MG1-0032 Schistosoma manso...    48   0.58   1
(CD134415) MG1-0032T-R263-F05-U.G MG1-0032 Schistosoma manso...    48   0.58   1
(CD134393) MG1-0032T-R263-C05-U.G MG1-0032 Schistosoma manso...    48   0.58   1
(AF096095) Arabidopsis thaliana fertilization-independent se...    46   0.79   2
(BD223811) Novel method of regulating seed development in pl...    46   0.83   2
(AM451696) Vitis vinifera contig VV79X004014.3, whole genome...    34   1.3    2
(AC108826) Mus musculus chromosome 16, clone RP23-109P11, co...    46   1.5    3
(CQ721561) Sequence 7495 from Patent WO02068579.                   36   1.9    3
(EF568108) Glossina pallidipes salivary gland hypertrophy vi...    46   2.3    1
(BK001933) TPA_inf: Drosophila melanogaster HDC08426 (HDC084...    46   2.3    1
(AC152167) Mus musculus BAC clone RP23-330B16 from 7, comple...    46   2.3    1
(AC135081) Mus musculus BAC clone RP24-131A24 from chromosom...    46   2.3    1
(FM992695) Candida dubliniensis CD36 chromosome R, complete ...    46   2.3    1
(EF691793) Trifolium repens clone CloverSSR-58_G04_010_1 mic...    46   2.3    1
(EF691788) Trifolium repens clone CloverSSR-58_F11_043_1 mic...    46   2.3    1
(DQ275158) Arabidopsis thaliana fertilization-independent se...    46   2.3    1
(CT485661) Leptosphaeria maculans : genomic region surroundi...    46   2.3    1
(CT485655) Leptosphaeria maculans : genomic region surroundi...    46   2.3    1
(AL732383) Leptosphaeria maculans : genomic region surroundi...    46   2.3    1
(AF080105) Pisum sativum knotted I class homeodomain protein...    46   2.3    1
(AE017342) Cryptococcus neoformans var. neoformans JEC21 chr...    46   2.3    1
(CQ576605) Sequence 4363 from Patent WO0171042.                    46   2.3    1
(CQ576603) Sequence 4361 from Patent WO0171042.                    46   2.3    1
(CQ576602) Sequence 4360 from Patent WO0171042.                    46   2.3    1
(BD223810) Novel method of regulating seed development in pl...    46   2.3    1
(EU787524) Plasmodium falciparum isolate u60A4r115.12 erythr...    46   2.3    1
(DQ407935) Plasmodium falciparum isolate wr87 sequence upsAv...    46   2.3    1
(AJ002382) Dictyostelium discoideum mRNA for paxillin-like p...    46   2.3    1
(AF145659) Drosophila melanogaster clone GH10333 BcDNA.GH103...    46   2.3    1
(AE014298) Drosophila melanogaster chromosome X, complete se...    46   2.3    1
(AE014296) Drosophila melanogaster chromosome 3L, complete s...    46   2.3    1
(AC154043) Drosophila melanogaster clone BACR39O11, complete...    46   2.3    1
(AC117070) Dictyostelium discoideum chromosome 2 map 2097701...    46   2.3    1
(AC104606) Drosophila melanogaster X BAC RP98-26L11 (Roswell...    46   2.3    1
(AC150405) Branchiostoma floridae clone CH302-50F24, WORKING...    46   2.3    1
(AC149967) Strongylocentrotus purpuratus clone R3-32B2, WORK...    46   2.3    1
(AC149927) Strongylocentrotus purpuratus clone R3-12M16, WOR...    46   2.3    1
(AC126513) Rattus norvegicus clone CH230-32O4, *** SEQUENCIN...    46   2.3    1
(AC123513) Dictyostelium discoideum strain AX4 chromosome 2 ...    46   2.3    1
(AC123006) Rattus norvegicus clone CH230-35N18, *** SEQUENCI...    46   2.3    1
(AC117062) Rattus norvegicus clone CH230-177D13, *** SEQUENC...    46   2.3    1
(AC109973) Rattus norvegicus clone CH230-66J18, *** SEQUENCI...    46   2.3    1
(AC106979) Rattus norvegicus clone CH230-205F12, WORKING DRA...    46   2.3    1
(AC106123) Rattus norvegicus clone CH230-116N2, *** SEQUENCI...    46   2.3    1
(AC094559) Rattus norvegicus clone CH230-4J24, WORKING DRAFT...    46   2.3    1
(AC094549) Rattus norvegicus clone CH230-4I24, WORKING DRAFT...    46   2.3    1
(CU639473) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   2.3    1
(CU407010) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    46   2.3    1
(AP003640) Mus musculus genomic DNA, chromosome 16q clone:RP...    46   2.3    1
(AL844509) Plasmodium falciparum chromosome 13.                    46   2.3    1
(AL049184) Plasmodium falciparum DNA *** SEQUENCING IN PROGR...    46   2.3    1
(AC232091) Solanum tuberosum chromosome 1 clone RH138F06, **...    46   2.3    1
(AC209251) Zea mays chromosome 9 clone CH201-5F9; ZMMBBc0005...    46   2.3    1
(AC201375) Strongylocentrotus purpuratus clone R3-17E3, WORK...    46   2.3    1
(AC201182) Strongylocentrotus purpuratus clone R3-14O1, WORK...    46   2.3    1
(AC188825) Zea mays chromosome 9 clone CH201-186P12; ZMMBBc0...    46   2.3    1
(AC184461) Strongylocentrotus purpuratus clone R3-4003J3, WO...    46   2.3    1
(AC184321) Strongylocentrotus purpuratus clone R3-4005K7, WO...    46   2.3    1
(AC184225) Strongylocentrotus purpuratus clone R3-3048L21, W...    46   2.3    1
(AC181537) Strongylocentrotus purpuratus clone R3-1109P4, WO...    46   2.3    1
(AC181144) Strongylocentrotus purpuratus clone R3-16F2, WORK...    46   2.3    1
(AC181029) Strongylocentrotus purpuratus clone R3-3050O24, W...    46   2.3    1
(AC179996) Strongylocentrotus purpuratus clone R3-16P23, WOR...    46   2.3    1
(AC179061) Strongylocentrotus purpuratus clone R3-4005N21, W...    46   2.3    1
(AC178830) Strongylocentrotus purpuratus clone R3-29F11, WOR...    46   2.3    1
(AC178593) Strongylocentrotus purpuratus clone R3-3021M6, WO...    46   2.3    1
(AC178183) Strongylocentrotus purpuratus clone R3-3082D3, WO...    46   2.3    1
(AC177199) Strongylocentrotus purpuratus clone R3-4018N2, WO...    46   2.3    1
(AC177116) Strongylocentrotus purpuratus clone R3-4014C8, WO...    46   2.3    1
(AC176608) Strongylocentrotus purpuratus clone R3-3079G22, W...    46   2.3    1
(AC176590) Strongylocentrotus purpuratus clone R3-3077L03, W...    46   2.3    1
(AC176586) Strongylocentrotus purpuratus clone R3-3077J04, W...    46   2.3    1
(AC176575) Strongylocentrotus purpuratus clone R3-3077E08, W...    46   2.3    1
(AC176151) Strongylocentrotus purpuratus clone R3-2I13, WORK...    46   2.3    1
(AC176022) Strongylocentrotus purpuratus clone R3-17P11, WOR...    46   2.3    1
(AC172391) Strongylocentrotus purpuratus clone R3-14O19, WOR...    46   2.3    1
(AC168486) Strongylocentrotus purpuratus clone R3-3117K8, WO...    46   2.3    1
(AC168375) Strongylocentrotus purpuratus clone R3-4013G22, W...    46   2.3    1
(AC015398) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    46   2.3    1
(AC014483) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    46   2.3    1
(AC010700) Drosophila melanogaster clone RPCI98-31B14, WORKI...    46   2.3    1
(BH275590) CH230-70I13.TJB CHORI-230 Segment 1 Rattus norveg...    46   2.3    1
(FH915795) CHO_ONF003xh12f2.ab1 CHO_ONF Nicotiana tabacum ge...    46   2.3    1
(FH915718) CHO_ONF003xh12f1.ab1 CHO_ONF Nicotiana tabacum ge...    46   2.3    1
(FH633502) CHO_OF4562xp09r1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   2.3    1
(FH397554) CHO_OF4811xm23f1.ab1 CHO_OF4 Nicotiana tabacum ge...    46   2.3    1
(ET844173) CHO_OF442xm22r1.ab1 CHO_OF Nicotiana tabacum geno...    46   2.3    1
(EI025653) bb27d10.r Dekkera bruxellensis Random Genomic Lib...    46   2.3    1
(DU120744) KBrH113B12F Brassica rapa BAC library KBrH Brassi...    46   2.3    1
(AL107276) Drosophila melanogaster genome survey sequence T7...    46   2.3    1
(DH652219) Rattus norvegicus DNA, BAC clone: RNB1-195J23, 5'...    46   2.3    1
(DH492490) Monosiga ovata DNA, fosmid clone: MOF-054B06, gen...    46   2.3    1
(DH471825) Monosiga ovata DNA, fosmid clone: MOF-018C20, gen...    46   2.3    1
(DH470816) Monosiga ovata DNA, fosmid clone: MOF-016G23, gen...    46   2.3    1
(CW979141) KBrH001K21F KBrH, Brassica rapa HindIII BAC libra...    46   2.3    1
(CR115058) Reverse strand read from insert in 3'HPRT inserti...    46   2.3    1
(CC217764) CH261-79O7_Sp6.1 CH261 Gallus gallus genomic clon...    46   2.3    1
(EL463794) CHTS1962.b2_C11.ab1 CHT(LMS) Jerusalem artichoke ...    46   2.3    1
(EL463612) CHTS18023.b1_N18.ab1 CHT(LMS) Jerusalem artichoke...    46   2.3    1
(EH010743) USDA-FP_183811 Lysiphlebus testaceipes adult whol...    46   2.3    1
(EC251334) 521506 CK01 Drosophila melanogaster cDNA clone 28...    46   2.3    1
(EC090068) 434180 CK01 Drosophila melanogaster cDNA clone 18...    46   2.3    1
(EB086313) Cc008 C. cohnii pExpress-1 Library Crypthecodiniu...    46   2.3    1
(DY893266) CeleSEQ12556 Cunninghamella elegans pBluescript (...    46   2.3    1
(DY892006) CeleSEQ8892 Cunninghamella elegans pBluescript (E...    46   2.3    1
(DY887810) CeleSEQ4518 Cunninghamella elegans pBluescript (E...    46   2.3    1
(DY887779) CeleSEQ4453 Cunninghamella elegans pBluescript (E...    46   2.3    1
(DY886961) CeleSEQ2806 Cunninghamella elegans pBluescript (E...    46   2.3    1
(DY228970) ID0AAK5YL11CM1 ApHL3SD Acyrthosiphon pisum cDNA c...    46   2.3    1
(DT573931) EST1084571 GH_TMO Gossypium hirsutum cDNA, mRNA s...    46   2.3    1
(DR026249) Osmo00116 F. cylindrus osmotic stress library Fra...    46   2.3    1
(AU060072) Dictyostelium discoideum slug cDNA, clone SLA102.       46   2.3    1
(CX947806) DH0AQA5ZG09RM1 HaDevS1 Helianthus annuus cDNA clo...    46   2.3    1
(CO334045) EK308739.5prime Exelixis FlyTag CK01 pCDNA-SK+ Dr...    46   2.3    1
(CO222009) WS01014.B21_K20 SS-R-N-A-11 Picea sitchensis cDNA...    46   2.3    1
(CN216047) 29902 Suspension culture Solanum tuberosum cDNA, ...    46   2.3    1
(CK248249) EST731886 potato callus cDNA library, normalized ...    46   2.3    1
(CF721753) CCAHD11TF C.neoformans strain JEC21 Cryptococcus ...    46   2.3    1
(CF720282) CCAHP13TF C.neoformans strain JEC21 Cryptococcus ...    46   2.3    1
(CF697098) CCAI509TF C.neoformans strain JEC21 Cryptococcus ...    46   2.3    1
(CF695067) CCABH29TF C.neoformans strain JEC21 Cryptococcus ...    46   2.3    1
(CF694067) CCAC416TF C.neoformans strain JEC21 Cryptococcus ...    46   2.3    1
(CF678542) CCABM86TF C.neoformans strain JEC21 Cryptococcus ...    46   2.3    1
(CD854329) DH0AMM29ZC06ZZM1 HaDevR6 Helianthus annuus cDNA c...    46   2.3    1
(CB285041) DF1898 Dermatophagoides farinae cDNA library Derm...    46   2.3    1
(C25513) Dictyostelium discoideum slug cDNA, clone SLA102.         46   2.3    1
(BQ118669) EST604245 mixed potato tissues Solanum tuberosum ...    46   2.3    1
(AI402202) GH10333.3prime GH Drosophila melanogaster head pO...    46   2.3    1
(BJ374255) Dictyostelium discoideum cDNA clone:ddc6m05, 3' e...    46   2.3    1
(BG639745) SD05368.3prime SD Drosophila melanogaster Schneid...    46   2.3    1
(BF069804) st56a02.y1 Gm-c1053 Glycine max cDNA clone GENOME...    46   2.3    1
(BE472144) EST416997 potato stolon, Cornell University Solan...    46   2.3    1
(GH710897) SDSS2_68 SDSS2 Camellia sinensis var. sinensis cD...    46   2.3    1
(GE514209) CCFT9326.b1_L03.ab1 CCF(STU) sunflower Helianthus...    46   2.3    1
(EY657268) CS00-C1-100-083-A09-CT.F Sweet orange leaf, green...    46   2.3    1
(EY653746) CS00-C1-100-047-H05-CT.F Sweet orange leaf, green...    46   2.3    1
(EY297402) CAWX13347.rev CAWX Helobdella robusta Primary Ear...    46   2.3    1
(EY296778) CAWX13000.rev CAWX Helobdella robusta Primary Ear...    46   2.3    1
(EX436060) GQ04001.B7_I20 GQ040 - Shoot tip - Active growth ...    46   2.3    1
(EX382887) GQ03305.B7_L19 GQ033 - Terminal leader (Normalize...    46   2.3    1
(EX347956) GQ03105.B7_L19 GQ031 - Xylem Scrapings (Normalize...    46   2.3    1
(EX312513) GQ02804.B7_O09 GQ028 - Cambium / phloem scrapping...    46   2.3    1
(EV380583) EST_oner_rge_730899 onerrge mixed_tissue Oncorhyn...    46   2.3    1
(EV142787) 0208719 Brassica napus Very early anther Brassica...    46   2.3    1
(EV142595) 0208527 Brassica napus Very early anther Brassica...    46   2.3    1
(ES730750) Nad03b_16_E02_C005.g1 Nuphar advena flower bud li...    46   2.3    1
(AK307487) Homo sapiens cDNA, FLJ97435.                            36   2.5    3
(BC114445) Homo sapiens nexilin (F actin binding protein), m...    36   3.1    3
(BC114444) Homo sapiens nexilin (F actin binding protein), m...    36   3.1    3
(AY193642) Lactuca saligna clone LC12 resistance protein RGC...    38   3.4    2
(DQ053383) Homo sapiens NEXILIN gene, VIRTUAL TRANSCRIPT, pa...    36   3.5    3
(AM920431) Penicillium chrysogenum Wisconsin 54-1255 complet...    34   3.5    2
(AK300728) Homo sapiens cDNA FLJ56909 complete cds, highly s...    36   3.6    3
(BC111395) Homo sapiens nexilin (F actin binding protein), m...    36   3.8    3
(AK298565) Homo sapiens cDNA FLJ56379 complete cds, highly s...    36   4.3    3
(AC116977) Dictyostelium discoideum chromosome 2 map 5515173...    44   5.0    8
(AR338629) Sequence 120 from patent US 6569662.                    36   5.4    3
(DQ464902) Homo sapiens nexilin (NEXN) mRNA, complete cds.         36   5.8    3
(DY886438) CeleSEQ2095 Cunninghamella elegans pBluescript (E...    36   6.1    2
(AF114264) Homo sapiens clone HH409 unknown mRNA.                  36   6.3    3
(AZ544391) ENTEP49TR Entamoeba histolytica Sheared DNA Entam...    36   6.6    2
(BH148682) ENTQB43TR Entamoeba histolytica Sheared DNA Entam...    36   6.8    2
(AF102232) Schistosoma mansoni G-box binding factor homolog ...    42   7.0    2
(AZ533144) ENTBE24TF Entamoeba histolytica Sheared DNA Entam...    36   7.1    2
(DD218779) STRUCTURAL AND CYTOSKELETON-ASSOCIATED PROTEINS.        36   8.6    3
(AJ279060) Dictyostelium discoideum gdt1 gene for hypothetic...    36   8.7    2
(AC158555) Mus musculus chromosome 3, clone RP23-14B10, comp...    44   9.0    1
(AC131724) Mus musculus BAC clone RP23-129E9 from 19, comple...    44   9.0    1
(AC102418) Mus musculus chromosome 3, clone RP24-499L10, com...    44   9.0    1
(EU350504) Tetratheca paynterae subsp. paynterae clone C130 ...    44   9.0    1
(AY283062) Medicago sativa subsp. sativa Saranac sativa poly...    44   9.0    1
(AM464603) Vitis vinifera, whole genome shotgun sequence, co...    44   9.0    1
(AM447097) Vitis vinifera contig VV79X005943.3, whole genome...    44   9.0    1
(AM431696) Vitis vinifera contig VV78X185432.5, whole genome...    44   9.0    1
(CQ580307) Sequence 8065 from Patent WO0171042.                    44   9.0    1
(AY645033) Empis livida even-skipped mRNA, partial cds.            44   9.0    1
(AY232267) Dictyostelium discoideum putative protein Roco5 (...    44   9.0    1
(AY143618) Amphipholis squamata clone AI1 microsatellite seq...    44   9.0    1
(AE014818) Plasmodium falciparum 3D7 chromosome 14 section 3...    44   9.0    1
(AE014134) Drosophila melanogaster chromosome 2L, complete s...    44   9.0    1
(AC116957) Dictyostelium discoideum chromosome 2 map 1685067...    44   9.0    1
(AC116956) Dictyostelium discoideum chromosome 2 map 1418423...    44   9.0    1
(AC007291) Drosophila melanogaster, chromosome 2L, region 30...    44   9.0    1
(AC110711) Rattus norvegicus clone CH230-389H2, WORKING DRAF...    44   9.0    1
(AC104398) Rattus norvegicus clone CH230-128I24, *** SEQUENC...    44   9.0    1
(AC094775) Rattus norvegicus clone CH230-5H1, WORKING DRAFT ...    44   9.0    1
(CU928783) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   9.0    1
(CU481231) Pig DNA sequence *** SEQUENCING IN PROGRESS *** f...    44   9.0    1
(AC087626) Homo sapiens chromosome 8 clone RP11-545M12 map 8...    44   9.0    1
(CR954213) Ostreococcus tauri chromosome 13 contig 1, DNA se...    44   9.0    1
(AC203580) Zea mays chromosome 8 clone CH201-182B20; ZMMBBc0...    44   9.0    1
(AC187086) Zea mays chromosome 8 clone CH201-192D11; ZMMBBc0...    44   9.0    1
(AC185177) Felis catus clone RP86-268O18, WORKING DRAFT SEQU...    44   9.0    1
(AC181502) Strongylocentrotus purpuratus clone R3-1111D7, WO...    44   9.0    1
(AC180823) Strongylocentrotus purpuratus clone R3-3071C20, W...    44   9.0    1
(AC180219) Strongylocentrotus purpuratus clone R3-38A2, WORK...    44   9.0    1
(AC178325) Strongylocentrotus purpuratus clone R3-3101O07, W...    44   9.0    1
(AC178013) Strongylocentrotus purpuratus clone R3-3055A17, W...    44   9.0    1
(AC177294) Strongylocentrotus purpuratus clone R3-1033E4, WO...    44   9.0    1
(AC176443) Strongylocentrotus purpuratus clone R3-3066P7, WO...    44   9.0    1
(AC176032) Strongylocentrotus purpuratus clone R3-18G21, WOR...    44   9.0    1
(AC020324) Drosophila melanogaster, *** SEQUENCING IN PROGRE...    44   9.0    1
(AC009339) Drosophila melanogaster strain y chromosome 2 clo...    44   9.0    1
(AZ178021) SP_0149_A1_B10_SP6E Strongylocentrotus purpuratus...    44   9.0    1
(AZ177482) SP_0147_A1_F04_T7A Strongylocentrotus purpuratus,...    44   9.0    1
(AZ167540) SP_0098_B1_F12_SP6E Strongylocentrotus purpuratus...    44   9.0    1
(AZ166374) SP_0088_A1_D06_T7A Strongylocentrotus purpuratus,...    44   9.0    1
(AZ166348) SP_0088_A1_C04_T7A Strongylocentrotus purpuratus,...    44   9.0    1
(AZ150049) SP_0005_B1_D03_SP6E Strongylocentrotus purpuratus...    44   9.0    1
(FI457626) CH322-28N20.x CHORI-322 Drosophila melanogaster g...    44   9.0    1
(FI204272) CccaBa013-B4TR CccABa Cajanus cajan genomic clone...    44   9.0    1
(FI199123) CccaBa031-F5TR CccABa Cajanus cajan genomic clone...    44   9.0    1
(FI080831) CHO_OF7393xn13r1.ab1 CHO_OF7 Nicotiana tabacum ge...    44   9.0    1
(FI080742) CHO_OF7393xn13f1.ab1 CHO_OF7 Nicotiana tabacum ge...    44   9.0    1
(FI059982) CHO_OF6640xn24r1.ab1 CHO_OF6 Nicotiana tabacum ge...    44   9.0    1
(FI059909) CHO_OF6640xn24f1.ab1 CHO_OF6 Nicotiana tabacum ge...    44   9.0    1
(FI002303) CHO_OF6892xe16r1.ab1 CHO_OF6 Nicotiana tabacum ge...    44   9.0    1
(FH979725) CHO_OF6826xe04r1.ab1 CHO_OF6 Nicotiana tabacum ge...    44   9.0    1
(FH954663) CHO_OF6761xf19f1.ab1 CHO_OF6 Nicotiana tabacum ge...    44   9.0    1
(FH950348) CHO_OF6751xi06r1.ab1 CHO_OF6 Nicotiana tabacum ge...    44   9.0    1
(FH932436) CHO_NF2043xc13f1.ab1 CHO_NF2 Nicotiana tabacum ge...    44   9.0    1
(FH927820) CHO_NF2002xk01f1.ab1 CHO_NF2 Nicotiana tabacum ge...    44   9.0    1
(FH915609) CHO_ONF003xn17f2.ab1 CHO_ONF Nicotiana tabacum ge...    44   9.0    1
(FH911438) CHO_ONF072xj13f1.ab1 CHO_ONF Nicotiana tabacum ge...    44   9.0    1
(FH856816) OSB_175005xe22f1.ab1 OSB_175 Nicotiana tabacum ge...    44   9.0    1
(FH856685) OSB_175004xi20f1.ab1 OSB_175 Nicotiana tabacum ge...    44   9.0    1
(FH856684) OSB_175004xi02f1.ab1 OSB_175 Nicotiana tabacum ge...    44   9.0    1
(FH856663) OSB_175004xm01f1.ab1 OSB_175 Nicotiana tabacum ge...    44   9.0    1
(FH856487) OSB_175003xg17f1.ab1 OSB_175 Nicotiana tabacum ge...    44   9.0    1
(FH678691) CHO_OF5049xh22r1.ab1 CHO_OF5 Nicotiana tabacum ge...    44   9.0    1
(FH631194) CHO_OF4068xa18r1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   9.0    1
(FH526961) CHO_OF4798xa01f1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   9.0    1
(FH459439) CHO_OF4930xk09r1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   9.0    1
(FH456846) CHO_OF4852xm11f1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   9.0    1
(FH371860) CHO_OF4522xo02r1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   9.0    1
(FH371781) CHO_OF4522xo02f1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   9.0    1
(FH360805) CHO_OF4690xf11r1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   9.0    1
(FH344186) CHO_OF4631xo12f1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   9.0    1
(FH299114) CHO_OF4237xi10r1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   9.0    1
(FH297479) CHO_OF4233xk19f1.ab1 CHO_OF4 Nicotiana tabacum ge...    44   9.0    1
(FH192383) CHO_OF3028xj05r1.ab1 CHO_OF3 Nicotiana tabacum ge...    44   9.0    1
(FH192057) CHO_OF3028xk05r1.ab1 CHO_OF3 Nicotiana tabacum ge...    44   9.0    1
(FH175257) CHO_OF3399xl08r1.ab1 CHO_OF3 Nicotiana tabacum ge...    44   9.0    1
(FH160849) CHO_OF3176xa06f1.ab1 CHO_OF3 Nicotiana tabacum ge...    44   9.0    1
(FH160731) CHO_OF3158xp18r1.ab1 CHO_OF3 Nicotiana tabacum ge...    44   9.0    1
(FH135929) CHO_OF3661xb07f1.ab1 CHO_OF3 Nicotiana tabacum ge...    44   9.0    1
(FH116872) CHO_OF3245xd16f1.ab1 CHO_OF3 Nicotiana tabacum ge...    44   9.0    1
(FH090313) CHO_OF3879xd15r1.ab1 CHO_OF3 Nicotiana tabacum ge...    44   9.0    1
(FH031113) CHO_OF3252xi09f1.ab1 CHO_OF3 Nicotiana tabacum ge...    44   9.0    1
(ET970745) CHO_OF651xc23r1.ab1 CHO_OF Nicotiana tabacum geno...    44   9.0    1
(ET970684) CHO_OF651xc23f1.ab1 CHO_OF Nicotiana tabacum geno...    44   9.0    1
(ET967370) CHO_OF632xk01r1.ab1 CHO_OF Nicotiana tabacum geno...    44   9.0    1
(ET955705) CHO_OF580xo10r1.ab1 CHO_OF Nicotiana tabacum geno...    44   9.0    1
(ET955627) CHO_OF580xo10f1.ab1 CHO_OF Nicotiana tabacum geno...    44   9.0    1
(ET944417) CHO_OF043xk06f1.ab1 CHO_OF Nicotiana tabacum geno...    44   9.0    1
(ET885034) CHO_OF090xb18r1.ab1 CHO_OF Nicotiana tabacum geno...    44   9.0    1
(ET884974) CHO_OF090xb18f1.ab1 CHO_OF Nicotiana tabacum geno...    44   9.0    1
(ET770439) CHO_OF561xo16f1.ab1 CHO_OF Nicotiana tabacum geno...    44   9.0    1
(ET760132) CHO_OF858xd03r1.ab1 CHO_OF Nicotiana tabacum geno...    44   9.0    1
(ET760054) CHO_OF858xd03f1.ab1 CHO_OF Nicotiana tabacum geno...    44   9.0    1
(ET750715) CHO_OF856xi18r1.ab1 CHO_OF Nicotiana tabacum geno...    44   9.0    1
(ET743326) CHO_OF255xj12f1.ab1 CHO_OF Nicotiana tabacum geno...    44   9.0    1
(ET723613) CHO_OF129xl11r1.ab1 CHO_OF Nicotiana tabacum geno...    44   9.0    1
(ET700656) CHO_OF034xm05r1.ab1 CHO_OF Nicotiana tabacum geno...    44   9.0    1
(ET700597) CHO_OF034xm05f1.ab1 CHO_OF Nicotiana tabacum geno...    44   9.0    1
(ET692654) CHO_OF842xk15f1.ab1 CHO_OF Nicotiana tabacum geno...    44   9.0    1
(DH502789) Monosiga ovata DNA, fosmid clone: MOF-072C15, gen...    44   9.0    1
(CG956333) MBEFK13TR mth2 Medicago truncatula genomic clone ...    44   9.0    1
(CG041752) PUFRD90TD ZM_0.6_1.0_KB Zea mays genomic clone ZM...    44   9.0    1
(CG041749) PUFRD90TB ZM_0.6_1.0_KB Zea mays genomic clone ZM...    44   9.0    1
(BZ999943) pPGSseq-17D11 pPGS Arachis hypogaea subsp. hypoga...    44   9.0    1
(EL373852) CFFM11086.b1_L12.ab1 CFF(LMS) safflower Carthamus...    44   9.0    1
(EL373588) CFFM10819.b1_E17.ab1 CFF(LMS) safflower Carthamus...    44   9.0    1
(EH777625) CNSM9931.b1_F12.ab1 CNS(LMS) yellow starthistle C...    44   9.0    1
(EH775084) CNSM7386.b1_C23.ab1 CNS(LMS) yellow starthistle C...    44   9.0    1
(EH730760) CNMM3795.b1_F14.ab1 CNM(LMS) spotted knapweed Cen...    44   9.0    1
(EH016720) USDA-FP_189192 Lysiphlebus testaceipes adult whol...    44   9.0    1
(EH016295) USDA-FP_188809 Lysiphlebus testaceipes adult whol...    44   9.0    1
(EB604960) AGENCOURT_56972588 D. grimshawi EST Drosophila gr...    44   9.0    1
(EB284335) CNSN01-F-004352-501 Normalized CNS library (juven...    44   9.0    1
(DY894699) CeleSEQ14331 Cunninghamella elegans pBluescript (...    44   9.0    1
(DY894479) CeleSEQ14059 Cunninghamella elegans pBluescript (...    44   9.0    1
(DY893920) CeleSEQ13383 Cunninghamella elegans pBluescript (...    44   9.0    1
(DY892982) CeleSEQ12131 Cunninghamella elegans pBluescript (...    44   9.0    1
(DY890871) CeleSEQ7344 Cunninghamella elegans pBluescript (E...    44   9.0    1
(DY890368) CeleSEQ9355 Cunninghamella elegans pBluescript (E...    44   9.0    1
(DY888827) CeleSEQ6171 Cunninghamella elegans pBluescript (E...    44   9.0    1
(DY887800) CeleSEQ4497 Cunninghamella elegans pBluescript (E...    44   9.0    1
(DY885447) CeleSEQ693 Cunninghamella elegans pBluescript (Ec...    44   9.0    1
(DW265059) UI-S-GN1-abs-k-09-0-UI.s1 UI-S-GN1 Euprymna scolo...    44   9.0    1
(DW255697) UI-S-GB1-aar-a-21-0-UI.s1 UI-S-GB1 Euprymna scolo...    44   9.0    1
(DW255445) UI-S-GB1-aam-p-12-0-UI.s1 UI-S-GB1 Euprymna scolo...    44   9.0    1
(DT730455) EST1164305 Aquilegia cDNA library Aquilegia formo...    44   9.0    1
(DT668992) He_wd2b1_01G09_M13R Heliconius erato wing disk 2 ...    44   9.0    1
(DB884315) Populus nigra mRNA, clone: PnFL2-053_I23, 5'end.        44   9.0    1
(AU073015) Dictyostelium discoideum slug cDNA, clone SSF710.       44   9.0    1
(CX531286) s13dNF24G08MJ065_248689 Methyl Jasmonate-Elicited...    44   9.0    1
(CX292921) C04023B07SK FlavFr1 Citrus clementina cDNA clone ...    44   9.0    1
(CK416159) AUF_IpPit_34_o05 Pituitary cDNA library Ictalurus...    44   9.0    1
(CF230535) PtaC0009E5E0509 Poplar cDNA library from cambial ...    44   9.0    1
(CD417361) Gm_ck7976 Soybean induced by Salicylic Acid Glyci...    44   9.0    1
(CD410566) Gm_ck38578 Soybean induced by Salicylic Acid Glyc...    44   9.0    1
(CD409749) Gm_ck36928 Soybean induced by Salicylic Acid Glyc...    44   9.0    1
(CD409545) Gm_ck36632 Soybean induced by Salicylic Acid Glyc...    44   9.0    1
(CB895022) EST647814 HOGA Medicago truncatula cDNA clone HOG...    44   9.0    1
(CB894878) EST647670 HOGA Medicago truncatula cDNA clone HOG...    44   9.0    1
(CB891192) EST648161 KV3 Medicago truncatula cDNA clone KV3-...    44   9.0    1
(CB818678) EST 3767 Half-Ripe Apricot Fruit Lambda Zap II Li...    44   9.0    1
(CA799208) sat82d08.y1 Gm-c1062 Glycine max cDNA clone SOYBE...    44   9.0    1
(BW668367) Glycine max cDNA clone: GMFL01-28-N10, 3'end.           44   9.0    1
(BU869818) Q004H08 Populus flower cDNA library Populus trich...    44   9.0    1
(BU549452) GM880017A20B12 Gm-r1088 Glycine max cDNA clone Gm...    44   9.0    1
(BM731892) sal86a10.y1 Gm-c1063 Glycine max cDNA clone SOYBE...    44   9.0    1
(BM522312) ESSU0850 S.scabiei cDNA library Sarcoptes scabiei...    44   9.0    1
(BJ428848) Dictyostelium discoideum cDNA clone:ddv1o12, 3' e...    44   9.0    1
(BJ389910) Dictyostelium discoideum cDNA clone:dds20e13, 5' ...    44   9.0    1
(BJ354934) Dictyostelium discoideum cDNA clone:dda55p02, 3' ...    44   9.0    1
(BJ325261) Dictyostelium discoideum cDNA clone:dda13f14, 5' ...    44   9.0    1
(BJ324440) Dictyostelium discoideum cDNA clone:dda6f12, 5' e...    44   9.0    1
(BI786112) sai33a08.y1 Gm-c1065 Glycine max cDNA clone GENOM...    44   9.0    1
(AA933304) SWBmL3SA487T3 Brugia malayi L3 subtracted cDNA li...    44   9.0    1
(BF647354) NF075A06EC1F1040 Elicited cell culture Medicago t...    44   9.0    1
(BF646499) NF075H11EC1F1095 Elicited cell culture Medicago t...    44   9.0    1
(BF644821) NF022D09EC1F1077 Elicited cell culture Medicago t...    44   9.0    1
(BF597923) sv02g11.y1 Gm-c1056 Glycine soja cDNA clone GENOM...    44   9.0    1
(GE524715) CCHS11809.b1_B02.ab1 CCHS Espina Barnadesia spino...    44   9.0    1
(GE032248) 454GmaGlobSeed774896 Soybean Seeds Containing Glo...    44   9.0    1
(GD916457) 454GmaGlobSeed659106 Soybean Seeds Containing Glo...    44   9.0    1
(GD884806) 454GmaGlobSeed627455 Soybean Seeds Containing Glo...    44   9.0    1
(GD794872) 454GmaGlobSeed537521 Soybean Seeds Containing Glo...    44   9.0    1
(FK486678) 454GmaGlobSeed221310 Soybean Seeds Containing Glo...    44   9.0    1
(FK458182) 454GmaGlobSeed192814 Soybean Seeds Containing Glo...    44   9.0    1
(FG993637) GLLE926TR JCVI-SOY1 Glycine max cDNA 5', mRNA seq...    44   9.0    1
(AW736347) EST332266 KV3 Medicago truncatula cDNA clone pKV3...    44   9.0    1
(AW696824) NF109C09ST1F1069 Developing stem Medicago truncat...    44   9.0    1
(AW690381) NF030A08ST1F1000 Developing stem Medicago truncat...    44   9.0    1
(AW684621) NF019A09NR1F1000 Nodulated root Medicago truncatu...    44   9.0    1
(AW586032) EST317655 MHAM Medicago truncatula/Glomus versifo...    44   9.0    1
(AW568843) si73a01.y1 Gm-c1031 Glycine max cDNA clone GENOME...    44   9.0    1
(EY948648) RS3DS49TF RS3(RT) Raphanus sativus cDNA 5', mRNA ...    44   9.0    1
(EY743444) CS00-C3-705-102-E08-CT.F Sweet orange fruit, deve...    44   9.0    1
(EY742759) CS00-C3-705-096-H04-CT.F Sweet orange fruit, deve...    44   9.0    1
(EY716571) CS00-C3-702-069-A04-CT.F Sweet orange fruit, deve...    44   9.0    1
(EY316068) CAWX26409.rev CAWX Helobdella robusta Primary Ear...    44   9.0    1
(EY315418) CAWX26041.rev CAWX Helobdella robusta Primary Ear...    44   9.0    1
(EY314038) CAWX25284.rev CAWX Helobdella robusta Primary Ear...    44   9.0    1
(EW736197) RS3A329JQ RS3(RT) Raphanus sativus cDNA 3', mRNA ...    44   9.0    1
(EW735893) RS3A329TR RS3(RT) Raphanus sativus cDNA 3', mRNA ...    44   9.0    1
(EW731328) RS3A329TF RS3(RT) Raphanus sativus cDNA 5', mRNA ...    44   9.0    1
(EW725128) RS2B773TF RS2(RS) Raphanus sativus cDNA 5', mRNA ...    44   9.0    1
(ES956311) 9RDBNGA_UP_150_D11_18SEP2005_089 Brassica napus 9...    44   9.0    1
(CP000552) Prochlorococcus marinus str. MIT 9515, complete g...    44   9.0    1

>(AC117072) Dictyostelium discoideum chromosome 2 map 3879572-4071762
              strain AX4, complete sequence.
          Length = 192187

 Score =  940 bits (474), Expect(4) = 0.0
 Identities = 480/482 (99%)
 Strand = Plus / Plus


Query: 321    aaaatattgaatcaattgaagagcaaagggtagtagtagtatatcataatgaagaatcgt 380
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 127450 aaaatattgaatcaattgaagagcaaagtgtagtagtagtatatcataatgaagaatcgt 127509


Query: 381    ctaacaatggtagcagtaataataccgaatgtaataatagtaaaataaatgatgaatcat 440
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127510 ctaacaatggtagcagtaataataccgaatgtaataatagtaaaataaatgatgaatcat 127569


Query: 441    caactaacaccccaaccacctcaaccaccacagcaacaaagaagaaaggagtaaatcata 500
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127570 caactaacaccccaaccacctcaaccaccacagcaacaaagaagaaaggagtaaatcata 127629


Query: 501    atgttggacatattatatcactatgtattgaaattacccatatcgttaacaagagtaaag 560
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127630 atgttggacatattatatcactatgtattgaaattacccatatcgttaacaagagtaaag 127689


Query: 561    gtcaattgcttagagatattgttgatgaatgttgcctattccaaggtcaatgggatgaag 620
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127690 gtcaattgcttagagatattgttgatgaatgttgcctattccaaggtcaatgggatgaag 127749


Query: 621    ttgttgtaccaaaattacgtcaagaaatatcatttagaaatatcaaaccaattggtaccg 680
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127750 ttgttgtaccaaaattacgtcaagaaatatcatttagaaatatcaaaccaattggtaccg 127809


Query: 681    tttcaatgcgtaaaggtagaaagggtgctccaccaacgccatttgcaaatgttgaatctt 740
              ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 127810 tttcaatgcgtaaaggtagaaagggtgctccaccaactccatttgcaaatgttgaatctt 127869


Query: 741    tccaaaatatggcaaatggtgttccaattcctccaacaaatccttcctcaaaattctttt 800
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127870 tccaaaatatggcaaatggtgttccaattcctccaacaaatccttcctcaaaattctttt 127929


Query: 801    tc 802
              ||
Sbjct: 127930 tc 127931

 Score = 79.8 bits (40), Expect(4) = 0.0
 Identities = 40/40 (100%)
 Strand = Plus / Plus


Query: 1      cttctacatcaactactacaacaaagataaatggcacctc 40
              ||||||||||||||||||||||||||||||||||||||||
Sbjct: 126796 cttctacatcaactactacaacaaagataaatggcacctc 126835

 Score = 79.8 bits (40), Expect(4) = 0.0
 Identities = 40/40 (100%)
 Strand = Plus / Plus


Query: 128    gttgatggataccttaaaatcaaaacaattaacaccagat 167
              ||||||||||||||||||||||||||||||||||||||||
Sbjct: 126923 gttgatggataccttaaaatcaaaacaattaacaccagat 126962

 Score = 50.1 bits (25), Expect(4) = 0.0
 Identities = 25/25 (100%)
 Strand = Plus / Plus


Query: 285    tcatcaacatcaacatcatcatcta 309
              |||||||||||||||||||||||||
Sbjct: 127080 tcatcaacatcaacatcatcatcta 127104

Lambda     K      H
    1.37    0.711     1.31

Matrix: blastn matrix:1 -3
Number of Sequences: 102105510
Number of Hits to DB: 728,580,097
Number of extensions: 44790498
Number of successful extensions: 3597325
Number of sequences better than 10.0: 402
Length of query: 879
Length of database: 101,790,757,118
Length adjustment: 24
Effective length of query: 855
Effective length of database: 99,340,224,878
Effective search space: 84935892270690
Effective search space used: 84935892270690
X1: 11 (21.8 bits)
S2: 22 (44.1 bits)
protein update 2009. 7.14
Homology vs Protein 
Query= Contig-U01201-1 (Contig-U01201-1Q) /CSM_Contig/Contig-U01201-1Q.Seq.d
         (879 letters)

Database: nrp_B
           3,236,559 sequences; 1,051,180,864 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC117072_48(AC117072|pid:none) Dictyostelium discoideum chromoso...   245   2e-63
CP001393_53(CP001393|pid:none) Anaerocellum thermophilum DSM 672...    36   1.9
CR626927_2782(CR626927|pid:none) Bacteroides fragilis NCTC 9343,...    35   3.3
AC151823_4(AC151823|pid:none) Medicago truncatula clone mth2-45h...    34   5.7

>AC117072_48(AC117072|pid:none) Dictyostelium discoideum chromosome 2
            map 3879572-4071762 strain AX4, complete sequence.
          Length = 1241

 Score =  245 bits (625), Expect = 2e-63
 Identities = 125/161 (77%), Positives = 125/161 (77%)
 Frame = +2

Query: 320  ENIESIEEQRVVVVYHXXXXXXXXXXXXXXXXXXKINDEXXXXXXXXXXXXXXXXXGVNH 499
            ENIESIEEQ VVVVYH                  KINDE                 GVNH
Sbjct: 1081 ENIESIEEQSVVVVYHNEESSNNGSSNNTECNNSKINDESSTNTPTTSTTTATKKKGVNH 1140

Query: 500  NVGHIISLCIEITHIVNKSKGQLLRDIVDECCLFQGQWDEVVVPKLRQEISFRNIKPIGT 679
            NVGHIISLCIEITHIVNKSKGQLLRDIVDECCLFQGQWDEVVVPKLRQEISFRNIKPIGT
Sbjct: 1141 NVGHIISLCIEITHIVNKSKGQLLRDIVDECCLFQGQWDEVVVPKLRQEISFRNIKPIGT 1200

Query: 680  VSMRKGRKGAPPTPFANVESFQNMANGVPIPPTNPSSKFFF 802
            VSMRKGRKGAPPTPFANVESFQNMANGVPIPPTNPSSKFFF
Sbjct: 1201 VSMRKGRKGAPPTPFANVESFQNMANGVPIPPTNPSSKFFF 1241

 Score = 43.9 bits (102), Expect = 0.007
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = +3

Query: 132 MDTLKSKQLTPDQEKAIKSQI 194
           MDTLKSKQLTPDQEKAIKSQI
Sbjct: 907 MDTLKSKQLTPDQEKAIKSQI 927

Lambda     K      H
   0.318    0.134    0.401

Gapped
Lambda     K      H
   0.267   0.0410    0.140

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 3236559
Number of Hits to DB: 853,155,042
Number of extensions: 14837917
Number of successful extensions: 40234
Number of sequences better than 10.0: 4
Number of HSP's gapped: 40224
Number of HSP's successfully gapped: 5
Length of query: 293
Length of database: 1,051,180,864
Length adjustment: 127
Effective length of query: 166
Effective length of database: 640,137,871
Effective search space: 106262886586
Effective search space used: 106262886586
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 32 (16.9 bits)
PSORT 

 psg: 0.78  gvh: 0.44  alm: 0.43  top: 0.53  tms: 0.00  mit: 0.46  mip: 0.00
 nuc: 0.06  erl: 0.00  erm: 0.20  pox: 0.00  px2: 0.00  vac: 0.00  rnp: 0.00
 act: 0.00  caa: 0.00  yqr: 0.00  tyr: 0.00  leu: 0.00  gpi: 0.00  myr: 0.00
 dna: 0.00  rib: 0.00  bac: 0.00  m1a: 0.00  m1b: 0.00  m2 : 0.00  mNt: 0.00
 m3a: 0.00  m3b: 0.00  m_ : 1.00 

	 68.0 %: mitochondrial
	 16.0 %: cytoplasmic
	  8.0 %: nuclear
	  4.0 %: plasma membrane
	  4.0 %: peroxisomal

>> prediction for Contig-U01201-1 is mit
VS (DIR, S) 0
VH (FL, L) 0
VF (FL, S) 0
AH (FL, L) 0
AF (FL, S) 0
SL (DIR, L) 2
SS (DIR, S) 0
SH (FL, L) 0
SF (FL, S) 0
CH (FL, L) 0
CF (FL, S) 0
FCL (DIR, L) 0
FC (DIR, S) 0
FC-IC (SUB) 0